Citrus Sinensis ID: 024562
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 266 | ||||||
| 297737842 | 1070 | unnamed protein product [Vitis vinifera] | 0.992 | 0.246 | 0.659 | 5e-95 | |
| 225423929 | 583 | PREDICTED: aluminum-activated malate tra | 0.992 | 0.452 | 0.659 | 6e-95 | |
| 307563621 | 340 | malate channel protein, partial [Malus x | 0.913 | 0.714 | 0.695 | 5e-93 | |
| 255576491 | 574 | conserved hypothetical protein [Ricinus | 0.973 | 0.451 | 0.669 | 2e-91 | |
| 224101695 | 544 | predicted protein [Populus trichocarpa] | 0.894 | 0.437 | 0.720 | 2e-91 | |
| 449435246 | 571 | PREDICTED: aluminum-activated malate tra | 0.988 | 0.460 | 0.638 | 2e-91 | |
| 356523739 | 558 | PREDICTED: aluminum-activated malate tra | 0.932 | 0.444 | 0.636 | 3e-86 | |
| 356498288 | 554 | PREDICTED: aluminum-activated malate tra | 0.932 | 0.447 | 0.632 | 5e-86 | |
| 356502452 | 551 | PREDICTED: aluminum-activated malate tra | 0.932 | 0.450 | 0.636 | 8e-86 | |
| 297851080 | 567 | predicted protein [Arabidopsis lyrata su | 0.981 | 0.460 | 0.624 | 2e-85 |
| >gi|297737842|emb|CBI27043.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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Score = 353 bits (905), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 182/276 (65%), Positives = 208/276 (75%), Gaps = 12/276 (4%)
Query: 1 MEFAIWEPPHGPYRSFNYPWKNYVKVSGALRHCAFMVMAMHGCILSEIQAPPEKRQVFAS 60
++FAIWEPPHG YR F+YPWK+YVKVSGALRHCAFMVMAMHGCILSEIQAPPEKRQVF+S
Sbjct: 793 LDFAIWEPPHGHYRMFHYPWKSYVKVSGALRHCAFMVMAMHGCILSEIQAPPEKRQVFSS 852
Query: 61 ELQNVGNEGAKVLRKLGDKVEKMERLSPEGILFEVHEAAEELQMKIDQKSYLLVNSESWA 120
ELQ VG EGAKVLR+LG KVEKME+L + +L EVHEAAEELQMKID+ S+LLVN SW
Sbjct: 853 ELQRVGVEGAKVLRELGRKVEKMEKLGQQDLLIEVHEAAEELQMKIDKNSFLLVNFASWE 912
Query: 121 AVAQRKELQDSENFNEVKDDENK--VINSLSEVC----------DAQNPNMGMNPPMQEW 168
A KE +D+EN +VKD E K VI SLSE +AQ PNM M+PPM W
Sbjct: 913 AGRLPKEYEDAENILQVKDTELKTPVITSLSETVLDLGSAPRSWNAQTPNMSMDPPMPGW 972
Query: 169 ISSENMSRNPVSWPRMSFHNIESTLGLQESKVYESASSLSLATFASLLIEFVARLQNLVE 228
+SSE+M + VSWP N + L QESK YESASSLSLATF SLLIEFVARLQ LV+
Sbjct: 973 VSSESMFKKQVSWPSGLSFNADLVLNEQESKTYESASSLSLATFTSLLIEFVARLQYLVD 1032
Query: 229 AFEELCEKANFKEPVEPPIGKGEVGFWSRLSRCFQL 264
+FEEL E A FK+P + P K VGFW+RL +CF L
Sbjct: 1033 SFEELSELAKFKDPADLPAPKEVVGFWTRLRQCFGL 1068
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Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225423929|ref|XP_002278978.1| PREDICTED: aluminum-activated malate transporter 4 [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|307563621|gb|ADN52374.1| malate channel protein, partial [Malus x domestica] | Back alignment and taxonomy information |
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| >gi|255576491|ref|XP_002529137.1| conserved hypothetical protein [Ricinus communis] gi|223531416|gb|EEF33250.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
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| >gi|224101695|ref|XP_002312386.1| predicted protein [Populus trichocarpa] gi|222852206|gb|EEE89753.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|449435246|ref|XP_004135406.1| PREDICTED: aluminum-activated malate transporter 4-like [Cucumis sativus] gi|449493500|ref|XP_004159319.1| PREDICTED: aluminum-activated malate transporter 4-like [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|356523739|ref|XP_003530492.1| PREDICTED: aluminum-activated malate transporter 4-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|356498288|ref|XP_003517985.1| PREDICTED: aluminum-activated malate transporter 4-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|356502452|ref|XP_003520033.1| PREDICTED: aluminum-activated malate transporter 4-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|297851080|ref|XP_002893421.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297339263|gb|EFH69680.1| predicted protein [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 266 | ||||||
| TAIR|locus:2031160 | 548 | AT1G25480 "AT1G25480" [Arabido | 0.909 | 0.441 | 0.594 | 3.6e-73 | |
| TAIR|locus:2026935 | 537 | AT1G68600 "AT1G68600" [Arabido | 0.909 | 0.450 | 0.604 | 1.6e-72 | |
| TAIR|locus:2053878 | 538 | ALMT6 "AT2G17470" [Arabidopsis | 0.973 | 0.481 | 0.571 | 2.3e-71 | |
| TAIR|locus:2095067 | 598 | ALMT9 "aluminum-activated mala | 0.906 | 0.403 | 0.535 | 4.8e-62 | |
| TAIR|locus:2014119 | 581 | AT1G18420 [Arabidopsis thalian | 0.906 | 0.414 | 0.482 | 5.5e-54 | |
| TAIR|locus:2134633 | 497 | AT4G00910 "AT4G00910" [Arabido | 0.515 | 0.275 | 0.308 | 2.5e-17 | |
| TAIR|locus:2142295 | 543 | AT5G46610 "AT5G46610" [Arabido | 0.879 | 0.430 | 0.275 | 7.1e-17 | |
| TAIR|locus:2141065 | 560 | ALMT12 "aluminum-activated, ma | 0.424 | 0.201 | 0.333 | 1.9e-15 | |
| TAIR|locus:2142290 | 539 | AT5G46600 "AT5G46600" [Arabido | 0.872 | 0.430 | 0.257 | 4.4e-12 | |
| TAIR|locus:2201781 | 493 | ALMT1 "aluminum-activated mala | 0.360 | 0.194 | 0.319 | 2e-10 |
| TAIR|locus:2031160 AT1G25480 "AT1G25480" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 739 (265.2 bits), Expect = 3.6e-73, P = 3.6e-73
Identities = 148/249 (59%), Positives = 182/249 (73%)
Query: 1 MEFAIWEPPHGPYRSFNYPWKNYVKVSGALRHCAFMVMAMHGCILSEIQAPPEKRQVFAS 60
++FA+WEPPHGPY++F++PW NYVK+SGA+RHCAFMVMAMHGCILSEIQA PEKRQ F
Sbjct: 296 LDFAVWEPPHGPYKTFHHPWANYVKLSGAVRHCAFMVMAMHGCILSEIQAAPEKRQAFRQ 355
Query: 61 ELQNVGNEGAKVLRKLGDKVEKMERLSPEGILFEVHEAAEELQMKIDQKSYLLVNSESWA 120
ELQ VGNEGAKVLR G+KVEKME+LSP +L +V AAEELQMKID S+LLVNSESWA
Sbjct: 356 ELQRVGNEGAKVLRLFGEKVEKMEKLSPGNVLKDVQRAAEELQMKIDSNSFLLVNSESWA 415
Query: 121 AVAQRKELQDSE-NFNEVKDDENKVINSLSEVCDAQN-P---NMGMNPPMQEWISSENMS 175
A+ ++ E ++++ N++E KDDE+KVI SLS++ D N P N Q WIS+E+M
Sbjct: 416 AMKEKAEAEEAQQNYHEAKDDESKVIQSLSQIWDNNNNPHHQNQHAGNDSQLWISTESMM 475
Query: 176 -RNPVSWPRMSFHNIESTLGLQESKVYEXXXXXXXXXXXXXXIEFVARLQNLVEAFEELC 234
RN +WP +SF S + ESKVYE IEFVARLQN+V A+EEL
Sbjct: 476 LRNRENWPSVSFIG-GSMINEIESKVYESASSLSLATFASLLIEFVARLQNIVNAYEELS 534
Query: 235 EKANFKEPV 243
KA+FKE V
Sbjct: 535 TKADFKEQV 543
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| TAIR|locus:2026935 AT1G68600 "AT1G68600" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2053878 ALMT6 "AT2G17470" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2095067 ALMT9 "aluminum-activated malate transporter 9" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2014119 AT1G18420 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2134633 AT4G00910 "AT4G00910" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2142295 AT5G46610 "AT5G46610" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2141065 ALMT12 "aluminum-activated, malate transporter 12" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2142290 AT5G46600 "AT5G46600" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2201781 ALMT1 "aluminum-activated malate transporter 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 266 | |||
| pfam11744 | 399 | pfam11744, ALMT, Aluminium activated malate transp | 1e-58 | |
| pfam11744 | 399 | pfam11744, ALMT, Aluminium activated malate transp | 2e-12 |
| >gnl|CDD|221201 pfam11744, ALMT, Aluminium activated malate transporter | Back alignment and domain information |
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Score = 191 bits (486), Expect = 1e-58
Identities = 74/128 (57%), Positives = 90/128 (70%), Gaps = 2/128 (1%)
Query: 1 MEFAIWEPPHGPYRSFNYPWKNYVKVSGALRHCAFMVMAMHGCILSEIQAPPEKRQVFAS 60
FA WEPPHG +R F +PWK YVK+ GALRHCA+ VMA+HGC+LSEIQAPPE R F
Sbjct: 238 ANFAKWEPPHGRFR-FRHPWKQYVKLGGALRHCAYTVMALHGCLLSEIQAPPELRNKFKE 296
Query: 61 ELQNVGNEGAKVLRKLGDKVEKMERLSP-EGILFEVHEAAEELQMKIDQKSYLLVNSESW 119
Q V EGAKVLR+L + ++KM +LSP E +L VH AAEELQ ID KSYL +NS
Sbjct: 297 PCQRVSIEGAKVLRELAESIKKMRKLSPIEILLDNVHVAAEELQSSIDSKSYLFLNSNKQ 356
Query: 120 AAVAQRKE 127
+ + K+
Sbjct: 357 LSKEEEKK 364
|
Length = 399 |
| >gnl|CDD|221201 pfam11744, ALMT, Aluminium activated malate transporter | Back alignment and domain information |
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Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 266 | |||
| PF11744 | 406 | ALMT: Aluminium activated malate transporter; Inte | 100.0 | |
| KOG4711 | 625 | consensus Predicted membrane protein [General func | 100.0 | |
| PF10334 | 229 | DUF2421: Protein of unknown function (DUF2421); In | 91.83 |
| >PF11744 ALMT: Aluminium activated malate transporter; InterPro: IPR020966 This entry represents an malate transporter which has been is identified as being critical for aluminium tolerance in Arabidopsis thaliana [] | Back alignment and domain information |
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Probab=100.00 E-value=9.4e-63 Score=472.88 Aligned_cols=169 Identities=53% Similarity=0.836 Sum_probs=152.2
Q ss_pred CCcccccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHhhccccccCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 024562 1 MEFAIWEPPHGPYRSFNYPWKNYVKVSGALRHCAFMVMAMHGCILSEIQAPPEKRQVFASELQNVGNEGAKVLRKLGDKV 80 (266)
Q Consensus 1 ~nfA~WEP~HGrF~~frhPW~qY~KvG~~lR~CAy~v~AL~gcl~seiQaP~e~r~~~~~~c~~v~~e~akvLreL~~si 80 (266)
+|||+|||+||||+ |||||+||+|||++||||||+|||||||++||||||+++|++|+++|++|+.|++|||||||++|
T Consensus 237 ~~~A~WEP~HG~f~-f~~Pw~~Y~kig~~lR~cay~v~AL~gcl~seiq~p~~~r~~~~~~~~~~~~e~~kvLrel~~~i 315 (406)
T PF11744_consen 237 ANFARWEPPHGRFR-FRHPWKQYLKIGALLRHCAYCVEALHGCLNSEIQAPPELRQKFQEECTRVSSESAKVLRELSNSI 315 (406)
T ss_pred hhhhhhcccccCCc-cCCcHHHHHHHHHHHHHHHHHHHHHHhcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 58999999999999 99999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhccCCC-cchHHHHHHHHHHHHHHHhhhhhhcccchhhHHHhhhhhhhccccccccccchhhhhcccchhcccCCCCC
Q 024562 81 EKMERLSP-EGILFEVHEAAEELQMKIDQKSYLLVNSESWAAVAQRKELQDSENFNEVKDDENKVINSLSEVCDAQNPNM 159 (266)
Q Consensus 81 k~M~~~s~-~~~l~evh~AaeeLQ~~I~~~s~Llv~se~w~~~~~~~~~~~~~~~~~~~~~~~~~~~s~S~~~~~~~~~~ 159 (266)
|+|+++++ .+++.++|+|+|+||++||++||||+|+++-.
T Consensus 316 k~m~~~~~~~~~~~~~~~A~~~Lq~~l~~~~~ll~~s~~~~--------------------------------------- 356 (406)
T PF11744_consen 316 KTMTKSSSIDDHVANLKEAAEDLQSKLDSQSYLLLNSESPE--------------------------------------- 356 (406)
T ss_pred HhcccCCCchhHHHHHHHHHHHHHHHHHhCCccccCCchhh---------------------------------------
Confidence 99999999 56689999999999999999999999987500
Q ss_pred CCCCCcchhhhccccCCCCCCCCccccccccccccccchhhhhccccchHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 024562 160 GMNPPMQEWISSENMSRNPVSWPRMSFHNIESTLGLQESKVYESASSLSLATFASLLIEFVARLQNLVEAFEELC 234 (266)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~swpa~~s~~~~~~~~~~e~~s~EsasaLslATFASLLIE~VARLe~vVdaVeELs 234 (266)
++.++++. ..+++.+++|++++||+|||||||||||+|+|+|||+|||||
T Consensus 357 ------------~~~~~~~~-------------~~~~~~~~~~~~~~l~lat~aSlLie~v~r~~~iv~~v~eLa 406 (406)
T PF11744_consen 357 ------------RSFLRPQS-------------SKEAEWTSYELLEALPLATFASLLIEFVARLENIVEAVEELA 406 (406)
T ss_pred ------------hhhccccc-------------cccccccchhHHHHhhHHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 00111111 123445899999999999999999999999999999999996
|
; GO: 0010044 response to aluminum ion |
| >KOG4711 consensus Predicted membrane protein [General function prediction only] | Back alignment and domain information |
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| >PF10334 DUF2421: Protein of unknown function (DUF2421); InterPro: IPR018820 This domain is found in several uncharacterised proteins and in Brefeldin A-sensitivity protein 4, which is a zinc finger protein containing five transmembrane domains | Back alignment and domain information |
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Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 266 | |||
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 4e-06 |
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 46.8 bits (110), Expect = 4e-06
Identities = 41/262 (15%), Positives = 78/262 (29%), Gaps = 85/262 (32%)
Query: 30 LRHCAFMVM-AMHGCILSEIQAPPEKRQVFASE-LQNVGNEGAKVLRKLGDKV------- 80
LR +++ + G + A + + KV K+ K+
Sbjct: 147 LRPAKNVLIDGVLGS----------GKTWVALDVCLS-----YKVQCKMDFKIFWLNLKN 191
Query: 81 --------EKMERL-------------SPEGILFEVHEAAEELQMKIDQKSY---LLV-- 114
E +++L I +H EL+ + K Y LLV
Sbjct: 192 CNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLL 251
Query: 115 ---NSESWAAVAQR-KEL---QDSENFNEVKDDENKVINSLSEVCDAQNPNMGMNPPMQE 167
N+++W A K L + + + + I SL +M + P +
Sbjct: 252 NVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHI-SLDHH------SMTLTPDEVK 304
Query: 168 WISSENMSRNPVSWPRMSFHNIESTLGLQESKVYESASSLSLATFASLLIEFVARLQNL- 226
+ + + P PR + + L+ A + + +A N
Sbjct: 305 SLLLKYLDCRPQDLPR------------EVLTT----NPRRLSIIAESIRDGLATWDNWK 348
Query: 227 ---VEAFEELCEKA-NFKEPVE 244
+ + E + N EP E
Sbjct: 349 HVNCDKLTTIIESSLNVLEPAE 370
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00