Citrus Sinensis ID: 024562


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260------
MEFAIWEPPHGPYRSFNYPWKNYVKVSGALRHCAFMVMAMHGCILSEIQAPPEKRQVFASELQNVGNEGAKVLRKLGDKVEKMERLSPEGILFEVHEAAEELQMKIDQKSYLLVNSESWAAVAQRKELQDSENFNEVKDDENKVINSLSEVCDAQNPNMGMNPPMQEWISSENMSRNPVSWPRMSFHNIESTLGLQESKVYESASSLSLATFASLLIEFVARLQNLVEAFEELCEKANFKEPVEPPIGKGEVGFWSRLSRCFQLKR
ccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHccccccccccccHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHcccc
ccccEEcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHccEEEEcccccccccccHHcccccccccccccccccEccccccccccccccccccccccccccHHHHcccccccccHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHccccc
mefaiwepphgpyrsfnypwknyvkvSGALRHCAFMVMAMHGCilseiqappekRQVFASELQNVGNEGAKVLRKLGDKVekmerlspegiLFEVHEAAEELQMKIDQKSYLLVNSESWAAVAQRKElqdsenfnevkddENKVINSLSEvcdaqnpnmgmnppmqewissenmsrnpvswprmsfhniestlglqeskvyesassLSLATFASLLIEFVARLQNLVEAFEELCEKanfkepveppigkgevgfwsRLSRCFQLKR
mefaiwepphgpyrsfnyPWKNYVKVSGALRHCAFMVMAMHGCILSEIQAPPEKRQVFASElqnvgnegaKVLRKLGDKVEKMERLSPEGILFEVHEAAEELQMKIDQKSYLLVNSESWAAVAQRkelqdsenfnevkdDENKVINSLSEVCDAQNPNMGMNPPMQEWISSENMSRNPVSWPRMSFHNIESTLGLQESKVYESASSLSLATFASLLIEFVARLQNLVEAFEELCEKanfkepveppigkgevgfwsrlsrcfqlkr
MEFAIWEPPHGPYRSFNYPWKNYVKVSGALRHCAFMVMAMHGCILSEIQAPPEKRQVFASELQNVGNEGAKVLRKLGDKVEKMERLSPEGILFEVHEAAEELQMKIDQKSYLLVNSESWAAVAQRKELQDSENFNEVKDDENKVINSLSEVCDAQNPNMGMNPPMQEWISSENMSRNPVSWPRMSFHNIESTLGLQESKVYEsasslslatfasllIEFVARLQNLVEAFEELCEKANFKEPVEPPIGKGEVGFWSRLSRCFQLKR
***AIWEPPHGPYRSFNYPWKNYVKVSGALRHCAFMVMAMHGCILSEIQ****************************************GILFEVHEAAEELQMKIDQKSYLLVNSESWAAV*****************************************************************NI**TLGL***KVYESASSLSLATFASLLIEFVARLQNLVEAFEELCEKANFKEPVEPPIGKGEVGFWSRLSRCF****
MEFAIWEPPHGPYRSFNYPWKNYVKVSGALRHCAFMVMAMHGCILSE**********FASELQNVGNEGAKVLRKLGDK***********ILFEVHEAAEELQMKIDQKSYLLVNSESWAAVAQRKELQD*********************************************************************VYESASSLSLATFASLLIEFVARLQNLVEAFEELCEKANFKEPVEPPIGKGEVGFWSRLSRCFQLKR
MEFAIWEPPHGPYRSFNYPWKNYVKVSGALRHCAFMVMAMHGCILSEIQAPPEKRQVFASELQNVGNEGAKVLRKLGDKVEKMERLSPEGILFEVHEAAEELQMKIDQKSYLLVNSESWAAVAQRKELQDSENFNEVKDDENKVINSLSEVCDAQNPNMGMNPPMQEWISSENMSRNPVSWPRMSFHNIESTLGLQESKVYESASSLSLATFASLLIEFVARLQNLVEAFEELCEKANFKEPVEPPIGKGEVGFWSRLSRCFQLKR
MEFAIWEPPHGPYRSFNYPWKNYVKVSGALRHCAFMVMAMHGCILSEIQAPPEKRQVFASELQNVGNEGAKVLRKLGDKVEKMERLSPEGILFEVHEAAEELQMKIDQKSYLLVNSES***********************************************************************ESTLGLQESKVYESASSLSLATFASLLIEFVARLQNLVEAFEELCEKANFKEPVEPPI**GEVGFWSRLSRCFQLKR
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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iiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MEFAIWEPPHGPYRSFNYPWKNYVKVSGALRHCAFMVMAMHGCILSEIQAPPEKRQVFASELQNVGNEGAKVLRKLGDKVEKMERLSPEGILFEVHEAAEELQMKIDQKSYLLVNSESWAAVAQRKELQDSENFNEVKDDENKVINSLSEVCDAQNPNMGMNPPMQEWISSENMSRNPVSWPRMSFHNIESTLGLQESKVYESASSLSLATFASLLIEFxxxxxxxxxxxxxxxxxxxxxEPVEPPIGKGEVGFWSRLSRCFQLKR
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query266 2.2.26 [Sep-21-2011]
Q9C6L8548 Aluminum-activated malate yes no 0.909 0.441 0.642 1e-83
Q9SHM1538 Aluminum-activated malate no no 0.943 0.466 0.622 8e-79
Q93Z29537 Aluminum-activated malate no no 0.909 0.450 0.652 3e-78
Q9LS46598 Aluminum-activated malate no no 0.988 0.439 0.556 3e-73
Q9LPQ8581 Putative aluminum-activat no no 0.894 0.409 0.518 1e-64
Q9LS22543 Aluminum-activated malate no no 0.845 0.414 0.308 3e-20
O49696560 Aluminum-activated malate no no 0.868 0.412 0.293 3e-19
Q9LS23539 Aluminum-activated malate no no 0.879 0.434 0.268 2e-14
O23086497 Aluminum-activated malate no no 0.375 0.201 0.333 4e-12
Q9SJE9493 Aluminum-activated malate no no 0.360 0.194 0.319 9e-10
>sp|Q9C6L8|ALMT4_ARATH Aluminum-activated malate transporter 4 OS=Arabidopsis thaliana GN=ALMT4 PE=3 SV=1 Back     alignment and function desciption
 Score =  309 bits (792), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 160/249 (64%), Positives = 194/249 (77%), Gaps = 7/249 (2%)

Query: 1   MEFAIWEPPHGPYRSFNYPWKNYVKVSGALRHCAFMVMAMHGCILSEIQAPPEKRQVFAS 60
           ++FA+WEPPHGPY++F++PW NYVK+SGA+RHCAFMVMAMHGCILSEIQA PEKRQ F  
Sbjct: 296 LDFAVWEPPHGPYKTFHHPWANYVKLSGAVRHCAFMVMAMHGCILSEIQAAPEKRQAFRQ 355

Query: 61  ELQNVGNEGAKVLRKLGDKVEKMERLSPEGILFEVHEAAEELQMKIDQKSYLLVNSESWA 120
           ELQ VGNEGAKVLR  G+KVEKME+LSP  +L +V  AAEELQMKID  S+LLVNSESWA
Sbjct: 356 ELQRVGNEGAKVLRLFGEKVEKMEKLSPGNVLKDVQRAAEELQMKIDSNSFLLVNSESWA 415

Query: 121 AVAQRKELQDS-ENFNEVKDDENKVINSLSEVCDAQNPNMGM----NPPMQEWISSENMS 175
           A+ ++ E +++ +N++E KDDE+KVI SLS++ D  N             Q WIS+E+M 
Sbjct: 416 AMKEKAEAEEAQQNYHEAKDDESKVIQSLSQIWDNNNNPHHQNQHAGNDSQLWISTESMM 475

Query: 176 -RNPVSWPRMSFHNIESTLGLQESKVYESASSLSLATFASLLIEFVARLQNLVEAFEELC 234
            RN  +WP +SF    S +   ESKVYESASSLSLATFASLLIEFVARLQN+V A+EEL 
Sbjct: 476 LRNRENWPSVSFIG-GSMINEIESKVYESASSLSLATFASLLIEFVARLQNIVNAYEELS 534

Query: 235 EKANFKEPV 243
            KA+FKE V
Sbjct: 535 TKADFKEQV 543




Malate transporter.
Arabidopsis thaliana (taxid: 3702)
>sp|Q9SHM1|ALMT6_ARATH Aluminum-activated malate transporter 6 OS=Arabidopsis thaliana GN=ALMT6 PE=3 SV=1 Back     alignment and function description
>sp|Q93Z29|ALMT5_ARATH Aluminum-activated malate transporter 5 OS=Arabidopsis thaliana GN=ALMT5 PE=2 SV=1 Back     alignment and function description
>sp|Q9LS46|ALMT9_ARATH Aluminum-activated malate transporter 9 OS=Arabidopsis thaliana GN=ALMT9 PE=2 SV=1 Back     alignment and function description
>sp|Q9LPQ8|ALMT3_ARATH Putative aluminum-activated malate transporter 3 OS=Arabidopsis thaliana GN=ALMT3 PE=3 SV=1 Back     alignment and function description
>sp|Q9LS22|ALMTE_ARATH Aluminum-activated malate transporter 14 OS=Arabidopsis thaliana GN=ALMT14 PE=2 SV=1 Back     alignment and function description
>sp|O49696|ALMTC_ARATH Aluminum-activated malate transporter 12 OS=Arabidopsis thaliana GN=ALMT12 PE=2 SV=1 Back     alignment and function description
>sp|Q9LS23|ALMTD_ARATH Aluminum-activated malate transporter 13 OS=Arabidopsis thaliana GN=ALMT13 PE=2 SV=1 Back     alignment and function description
>sp|O23086|ALMTA_ARATH Aluminum-activated malate transporter 10 OS=Arabidopsis thaliana GN=ALMT10 PE=3 SV=2 Back     alignment and function description
>sp|Q9SJE9|ALMT1_ARATH Aluminum-activated malate transporter 1 OS=Arabidopsis thaliana GN=ALMT1 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query266
297737842 1070 unnamed protein product [Vitis vinifera] 0.992 0.246 0.659 5e-95
225423929 583 PREDICTED: aluminum-activated malate tra 0.992 0.452 0.659 6e-95
307563621340 malate channel protein, partial [Malus x 0.913 0.714 0.695 5e-93
255576491 574 conserved hypothetical protein [Ricinus 0.973 0.451 0.669 2e-91
224101695 544 predicted protein [Populus trichocarpa] 0.894 0.437 0.720 2e-91
449435246 571 PREDICTED: aluminum-activated malate tra 0.988 0.460 0.638 2e-91
356523739 558 PREDICTED: aluminum-activated malate tra 0.932 0.444 0.636 3e-86
356498288 554 PREDICTED: aluminum-activated malate tra 0.932 0.447 0.632 5e-86
356502452 551 PREDICTED: aluminum-activated malate tra 0.932 0.450 0.636 8e-86
297851080 567 predicted protein [Arabidopsis lyrata su 0.981 0.460 0.624 2e-85
>gi|297737842|emb|CBI27043.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
 Score =  353 bits (905), Expect = 5e-95,   Method: Compositional matrix adjust.
 Identities = 182/276 (65%), Positives = 208/276 (75%), Gaps = 12/276 (4%)

Query: 1    MEFAIWEPPHGPYRSFNYPWKNYVKVSGALRHCAFMVMAMHGCILSEIQAPPEKRQVFAS 60
            ++FAIWEPPHG YR F+YPWK+YVKVSGALRHCAFMVMAMHGCILSEIQAPPEKRQVF+S
Sbjct: 793  LDFAIWEPPHGHYRMFHYPWKSYVKVSGALRHCAFMVMAMHGCILSEIQAPPEKRQVFSS 852

Query: 61   ELQNVGNEGAKVLRKLGDKVEKMERLSPEGILFEVHEAAEELQMKIDQKSYLLVNSESWA 120
            ELQ VG EGAKVLR+LG KVEKME+L  + +L EVHEAAEELQMKID+ S+LLVN  SW 
Sbjct: 853  ELQRVGVEGAKVLRELGRKVEKMEKLGQQDLLIEVHEAAEELQMKIDKNSFLLVNFASWE 912

Query: 121  AVAQRKELQDSENFNEVKDDENK--VINSLSEVC----------DAQNPNMGMNPPMQEW 168
            A    KE +D+EN  +VKD E K  VI SLSE            +AQ PNM M+PPM  W
Sbjct: 913  AGRLPKEYEDAENILQVKDTELKTPVITSLSETVLDLGSAPRSWNAQTPNMSMDPPMPGW 972

Query: 169  ISSENMSRNPVSWPRMSFHNIESTLGLQESKVYESASSLSLATFASLLIEFVARLQNLVE 228
            +SSE+M +  VSWP     N +  L  QESK YESASSLSLATF SLLIEFVARLQ LV+
Sbjct: 973  VSSESMFKKQVSWPSGLSFNADLVLNEQESKTYESASSLSLATFTSLLIEFVARLQYLVD 1032

Query: 229  AFEELCEKANFKEPVEPPIGKGEVGFWSRLSRCFQL 264
            +FEEL E A FK+P + P  K  VGFW+RL +CF L
Sbjct: 1033 SFEELSELAKFKDPADLPAPKEVVGFWTRLRQCFGL 1068




Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225423929|ref|XP_002278978.1| PREDICTED: aluminum-activated malate transporter 4 [Vitis vinifera] Back     alignment and taxonomy information
>gi|307563621|gb|ADN52374.1| malate channel protein, partial [Malus x domestica] Back     alignment and taxonomy information
>gi|255576491|ref|XP_002529137.1| conserved hypothetical protein [Ricinus communis] gi|223531416|gb|EEF33250.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
>gi|224101695|ref|XP_002312386.1| predicted protein [Populus trichocarpa] gi|222852206|gb|EEE89753.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|449435246|ref|XP_004135406.1| PREDICTED: aluminum-activated malate transporter 4-like [Cucumis sativus] gi|449493500|ref|XP_004159319.1| PREDICTED: aluminum-activated malate transporter 4-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|356523739|ref|XP_003530492.1| PREDICTED: aluminum-activated malate transporter 4-like [Glycine max] Back     alignment and taxonomy information
>gi|356498288|ref|XP_003517985.1| PREDICTED: aluminum-activated malate transporter 4-like [Glycine max] Back     alignment and taxonomy information
>gi|356502452|ref|XP_003520033.1| PREDICTED: aluminum-activated malate transporter 4-like [Glycine max] Back     alignment and taxonomy information
>gi|297851080|ref|XP_002893421.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297339263|gb|EFH69680.1| predicted protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query266
TAIR|locus:2031160548 AT1G25480 "AT1G25480" [Arabido 0.909 0.441 0.594 3.6e-73
TAIR|locus:2026935537 AT1G68600 "AT1G68600" [Arabido 0.909 0.450 0.604 1.6e-72
TAIR|locus:2053878538 ALMT6 "AT2G17470" [Arabidopsis 0.973 0.481 0.571 2.3e-71
TAIR|locus:2095067598 ALMT9 "aluminum-activated mala 0.906 0.403 0.535 4.8e-62
TAIR|locus:2014119581 AT1G18420 [Arabidopsis thalian 0.906 0.414 0.482 5.5e-54
TAIR|locus:2134633497 AT4G00910 "AT4G00910" [Arabido 0.515 0.275 0.308 2.5e-17
TAIR|locus:2142295543 AT5G46610 "AT5G46610" [Arabido 0.879 0.430 0.275 7.1e-17
TAIR|locus:2141065560 ALMT12 "aluminum-activated, ma 0.424 0.201 0.333 1.9e-15
TAIR|locus:2142290539 AT5G46600 "AT5G46600" [Arabido 0.872 0.430 0.257 4.4e-12
TAIR|locus:2201781493 ALMT1 "aluminum-activated mala 0.360 0.194 0.319 2e-10
TAIR|locus:2031160 AT1G25480 "AT1G25480" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 739 (265.2 bits), Expect = 3.6e-73, P = 3.6e-73
 Identities = 148/249 (59%), Positives = 182/249 (73%)

Query:     1 MEFAIWEPPHGPYRSFNYPWKNYVKVSGALRHCAFMVMAMHGCILSEIQAPPEKRQVFAS 60
             ++FA+WEPPHGPY++F++PW NYVK+SGA+RHCAFMVMAMHGCILSEIQA PEKRQ F  
Sbjct:   296 LDFAVWEPPHGPYKTFHHPWANYVKLSGAVRHCAFMVMAMHGCILSEIQAAPEKRQAFRQ 355

Query:    61 ELQNVGNEGAKVLRKLGDKVEKMERLSPEGILFEVHEAAEELQMKIDQKSYLLVNSESWA 120
             ELQ VGNEGAKVLR  G+KVEKME+LSP  +L +V  AAEELQMKID  S+LLVNSESWA
Sbjct:   356 ELQRVGNEGAKVLRLFGEKVEKMEKLSPGNVLKDVQRAAEELQMKIDSNSFLLVNSESWA 415

Query:   121 AVAQRKELQDSE-NFNEVKDDENKVINSLSEVCDAQN-P---NMGMNPPMQEWISSENMS 175
             A+ ++ E ++++ N++E KDDE+KVI SLS++ D  N P   N       Q WIS+E+M 
Sbjct:   416 AMKEKAEAEEAQQNYHEAKDDESKVIQSLSQIWDNNNNPHHQNQHAGNDSQLWISTESMM 475

Query:   176 -RNPVSWPRMSFHNIESTLGLQESKVYEXXXXXXXXXXXXXXIEFVARLQNLVEAFEELC 234
              RN  +WP +SF    S +   ESKVYE              IEFVARLQN+V A+EEL 
Sbjct:   476 LRNRENWPSVSFIG-GSMINEIESKVYESASSLSLATFASLLIEFVARLQNIVNAYEELS 534

Query:   235 EKANFKEPV 243
              KA+FKE V
Sbjct:   535 TKADFKEQV 543




GO:0003674 "molecular_function" evidence=ND
GO:0005634 "nucleus" evidence=ISM
GO:0010044 "response to aluminum ion" evidence=IEA
TAIR|locus:2026935 AT1G68600 "AT1G68600" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2053878 ALMT6 "AT2G17470" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2095067 ALMT9 "aluminum-activated malate transporter 9" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2014119 AT1G18420 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2134633 AT4G00910 "AT4G00910" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2142295 AT5G46610 "AT5G46610" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2141065 ALMT12 "aluminum-activated, malate transporter 12" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2142290 AT5G46600 "AT5G46600" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2201781 ALMT1 "aluminum-activated malate transporter 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query266
pfam11744399 pfam11744, ALMT, Aluminium activated malate transp 1e-58
pfam11744399 pfam11744, ALMT, Aluminium activated malate transp 2e-12
>gnl|CDD|221201 pfam11744, ALMT, Aluminium activated malate transporter Back     alignment and domain information
 Score =  191 bits (486), Expect = 1e-58
 Identities = 74/128 (57%), Positives = 90/128 (70%), Gaps = 2/128 (1%)

Query: 1   MEFAIWEPPHGPYRSFNYPWKNYVKVSGALRHCAFMVMAMHGCILSEIQAPPEKRQVFAS 60
             FA WEPPHG +R F +PWK YVK+ GALRHCA+ VMA+HGC+LSEIQAPPE R  F  
Sbjct: 238 ANFAKWEPPHGRFR-FRHPWKQYVKLGGALRHCAYTVMALHGCLLSEIQAPPELRNKFKE 296

Query: 61  ELQNVGNEGAKVLRKLGDKVEKMERLSP-EGILFEVHEAAEELQMKIDQKSYLLVNSESW 119
             Q V  EGAKVLR+L + ++KM +LSP E +L  VH AAEELQ  ID KSYL +NS   
Sbjct: 297 PCQRVSIEGAKVLRELAESIKKMRKLSPIEILLDNVHVAAEELQSSIDSKSYLFLNSNKQ 356

Query: 120 AAVAQRKE 127
            +  + K+
Sbjct: 357 LSKEEEKK 364


Length = 399

>gnl|CDD|221201 pfam11744, ALMT, Aluminium activated malate transporter Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 266
PF11744406 ALMT: Aluminium activated malate transporter; Inte 100.0
KOG4711625 consensus Predicted membrane protein [General func 100.0
PF10334229 DUF2421: Protein of unknown function (DUF2421); In 91.83
>PF11744 ALMT: Aluminium activated malate transporter; InterPro: IPR020966 This entry represents an malate transporter which has been is identified as being critical for aluminium tolerance in Arabidopsis thaliana [] Back     alignment and domain information
Probab=100.00  E-value=9.4e-63  Score=472.88  Aligned_cols=169  Identities=53%  Similarity=0.836  Sum_probs=152.2

Q ss_pred             CCcccccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHhhccccccCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 024562            1 MEFAIWEPPHGPYRSFNYPWKNYVKVSGALRHCAFMVMAMHGCILSEIQAPPEKRQVFASELQNVGNEGAKVLRKLGDKV   80 (266)
Q Consensus         1 ~nfA~WEP~HGrF~~frhPW~qY~KvG~~lR~CAy~v~AL~gcl~seiQaP~e~r~~~~~~c~~v~~e~akvLreL~~si   80 (266)
                      +|||+|||+||||+ |||||+||+|||++||||||+|||||||++||||||+++|++|+++|++|+.|++|||||||++|
T Consensus       237 ~~~A~WEP~HG~f~-f~~Pw~~Y~kig~~lR~cay~v~AL~gcl~seiq~p~~~r~~~~~~~~~~~~e~~kvLrel~~~i  315 (406)
T PF11744_consen  237 ANFARWEPPHGRFR-FRHPWKQYLKIGALLRHCAYCVEALHGCLNSEIQAPPELRQKFQEECTRVSSESAKVLRELSNSI  315 (406)
T ss_pred             hhhhhhcccccCCc-cCCcHHHHHHHHHHHHHHHHHHHHHHhcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            58999999999999 99999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HhhccCCC-cchHHHHHHHHHHHHHHHhhhhhhcccchhhHHHhhhhhhhccccccccccchhhhhcccchhcccCCCCC
Q 024562           81 EKMERLSP-EGILFEVHEAAEELQMKIDQKSYLLVNSESWAAVAQRKELQDSENFNEVKDDENKVINSLSEVCDAQNPNM  159 (266)
Q Consensus        81 k~M~~~s~-~~~l~evh~AaeeLQ~~I~~~s~Llv~se~w~~~~~~~~~~~~~~~~~~~~~~~~~~~s~S~~~~~~~~~~  159 (266)
                      |+|+++++ .+++.++|+|+|+||++||++||||+|+++-.                                       
T Consensus       316 k~m~~~~~~~~~~~~~~~A~~~Lq~~l~~~~~ll~~s~~~~---------------------------------------  356 (406)
T PF11744_consen  316 KTMTKSSSIDDHVANLKEAAEDLQSKLDSQSYLLLNSESPE---------------------------------------  356 (406)
T ss_pred             HhcccCCCchhHHHHHHHHHHHHHHHHHhCCccccCCchhh---------------------------------------
Confidence            99999999 56689999999999999999999999987500                                       


Q ss_pred             CCCCCcchhhhccccCCCCCCCCccccccccccccccchhhhhccccchHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 024562          160 GMNPPMQEWISSENMSRNPVSWPRMSFHNIESTLGLQESKVYESASSLSLATFASLLIEFVARLQNLVEAFEELC  234 (266)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~swpa~~s~~~~~~~~~~e~~s~EsasaLslATFASLLIE~VARLe~vVdaVeELs  234 (266)
                                  ++.++++.             ..+++.+++|++++||+|||||||||||+|+|+|||+|||||
T Consensus       357 ------------~~~~~~~~-------------~~~~~~~~~~~~~~l~lat~aSlLie~v~r~~~iv~~v~eLa  406 (406)
T PF11744_consen  357 ------------RSFLRPQS-------------SKEAEWTSYELLEALPLATFASLLIEFVARLENIVEAVEELA  406 (406)
T ss_pred             ------------hhhccccc-------------cccccccchhHHHHhhHHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence                        00111111             123445899999999999999999999999999999999996



; GO: 0010044 response to aluminum ion

>KOG4711 consensus Predicted membrane protein [General function prediction only] Back     alignment and domain information
>PF10334 DUF2421: Protein of unknown function (DUF2421); InterPro: IPR018820 This domain is found in several uncharacterised proteins and in Brefeldin A-sensitivity protein 4, which is a zinc finger protein containing five transmembrane domains Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query266
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 4e-06
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 46.8 bits (110), Expect = 4e-06
 Identities = 41/262 (15%), Positives = 78/262 (29%), Gaps = 85/262 (32%)

Query: 30  LRHCAFMVM-AMHGCILSEIQAPPEKRQVFASE-LQNVGNEGAKVLRKLGDKV------- 80
           LR    +++  + G            +   A +   +      KV  K+  K+       
Sbjct: 147 LRPAKNVLIDGVLGS----------GKTWVALDVCLS-----YKVQCKMDFKIFWLNLKN 191

Query: 81  --------EKMERL-------------SPEGILFEVHEAAEELQMKIDQKSY---LLV-- 114
                   E +++L                 I   +H    EL+  +  K Y   LLV  
Sbjct: 192 CNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLL 251

Query: 115 ---NSESWAAVAQR-KEL---QDSENFNEVKDDENKVINSLSEVCDAQNPNMGMNPPMQE 167
              N+++W A     K L   +  +  + +       I SL         +M + P   +
Sbjct: 252 NVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHI-SLDHH------SMTLTPDEVK 304

Query: 168 WISSENMSRNPVSWPRMSFHNIESTLGLQESKVYESASSLSLATFASLLIEFVARLQNL- 226
            +  + +   P   PR            +        +   L+  A  + + +A   N  
Sbjct: 305 SLLLKYLDCRPQDLPR------------EVLTT----NPRRLSIIAESIRDGLATWDNWK 348

Query: 227 ---VEAFEELCEKA-NFKEPVE 244
               +    + E + N  EP E
Sbjct: 349 HVNCDKLTTIIESSLNVLEPAE 370


Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00