Citrus Sinensis ID: 024595

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-----
Protein Sequence
MGLIGEKLEIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQKQWYNVLGNHDYRGDVEAQLSPVLTRKDSRWLCSRSFILDAEIAEFVFVDTTPFVDEYFEDPGDSTYDWRGVYRRKEYLSDLLKDVDGALKNSKAKWKIVVGHHTIKSAGHHGVTKELLLRLLPILEENNVDMYVNGHDHCLQHISSNGIEFLTSGGGSKAWRGDRNWWSPEELKLYYDGQGFMSVKMTRSEAVVLFYDVHGNILHKWSIPKEPLKAA
Secondary Structure (PSIPRED)
cHHHHHcccccEEEEccccccccccccccHHHHHHHHHHHccccccccEEEEEccccccccccccccccccccccccccccccccccccccEEEEEcccccccccccccccccccccccccHHHHHHHHHHHHHHHHHcccccEEEEEEcccccccccccccHHHHHHHHHHHHHccccEEEEcccccEEEEEccccEEEEEcccccccccccccccccccEEEEccccEEEEEEEccEEEEEEEEccccEEEEEEEEccccccc
Secondary Structure Prediction (SSPRO)
ccHHHHHccccEEEEEccccccccccccccHHHHccHHHHcccccccccEEEEEcccccccccEEEccccEEccccccccccEEEEcccEEEEEEEEccccHccccccccccccccccccccHHHHHHHHHHHHHHHHHccccEEEEEccccEEEcccccccHHHHHHHHHHHHHcccEEEEEccccccEEEcccccEEEEEccccccccccccccccccEEEEEccccEEEEEEcccEEEEEEEEccccEEEEEEEcccccccc
Coil and Loop (DISEMBL)
MGLIGEKLEIDFVIStgdnfyedgltgeedpafldsftsiytapslqKQWYNVlgnhdyrgdveaqlspvltrkdsrwlcsRSFILDAEIAefvfvdttpfvdeyfedpgdstydwrgvyRRKEYLSDLLKDVDGALKNSKAKWKIVVGHHtiksaghhgvTKELLLRLLpileennvdmyvNGHDHCLQHISSNGIEfltsgggskawrgdrnwwspeelklyydgqgfmsvkMTRSEAVVLFYDVHgnilhkwsipkeplkaa
Flexible Loop (DISEMBL)
MGLIGEKLEIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQKQWYNVLGNHDYRGDVEAQLspvltrkdsrWLCSRSFILDAEIAEFVFVDTtpfvdeyfedpgdstydwrgvYRRKEYLSDLLKDVDGALKNSKAKWKIVVGHHtiksaghhgvtKELLLRLLPILEENNVDMYVNGHDHCLQHISSNGIEFLTSGGGSKAWRGDRNWWSPEELKLYYDGQGFMSVKMTRSEAVVLFYDVHGnilhkwsipkeplkaa
Low Complexity Region (SEG)
MGLIGEKLEIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQKQWYNVLGNHDYRGDVEAQLSPVLTRKDSRWLCSRSFILDAEIAEFVFVDTTPFVDEYFEDPGDSTYDWRGVYRRKEYLSDLLKDVDGALKNSKAKWKIVVGHHTIKSAGHHGVTKelllrllpileeNNVDMYVNGHDHCLQHISSNGIEFLTSGGGSKAWRGDRNWWSPEELKLYYDGQGFMSVKMTRSEAVVLFYDVHGNILHKWSIPKEPLKAA
Disordered region (IsUnstruct)
***IGEKLEIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQKQWYNVLGNHDYRGDVEAQLSPVLTRKDSRWLCSRSFILDAEIAEFVFVDTTPFVDEYFEDPGDSTYDWRGVYRRKEYLSDLLKDVDGALKNSKAKWKIVVGHHTIKSAGHHGVTKELLLRLLPILEENNVDMYVNGHDHCLQHISSNGIEFLTSGGGSKAWRGDRNWWSPEELKLYYDGQGFMSVKMTRSEAVVLFYDVHGNILHKWSI********
Disordered Region (DISOPRED)
*GL***KLEIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQKQWYNVLGNHDYRGDVEAQLSPVLTRKDSRWLCSRSFILDAEIAEFVFVDTTPFVDEYFEDPGDSTYDWRGVYRRKEYLSDLLKDVDGALKNSKAKWKIVVGHHTIKSAGHHGVTKELLLRLLPILEENNVDMYVNGHDHCLQHISSNGIEFLTSGGGSKAWRGDRNWWSPEELKLYYDGQGFMSVKMTRSEAVVLFYDVHGNILHKWS**KE*****
Disordered Region (DISEMBL)
MGLIGEKLEIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQKQWYNVLGNHDYRGDVEAQLSPVLTRKDSRWLCSRSFILDAEIAEFVFVDTTPFVDEYFEDPGDSTYDWRGVYRRKEYLSDLLKDVDGALKNSKAKWKIVVGHHTIKSAGHHGVTKELLLRLLPILEENNVDMYVNGHDHCLQHISSNGIEFLTSGGGSKAWRGDRNWWSPEELKLYYDGQGFMSVKMTRSEAVVLFYDVHGNILHKWSIPKEPLKAA
Disordered Region (DISPRO)
*GLIGEKLEIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQKQWYNVLGNHDYRGDVEAQLSPVLTRKDSRWLCSRSFILDAEIAEFVFVDTTPFVDEYFEDPGDSTYDWRGVYRRKEYLSDLLKDVDGALKNSKAKWKIVVGHHTIKSAGHHGVTKELLLRLLPILEENNVDMYVNGHDHCLQHISSNGIEFLTSGGGSKAWRGDRNWWSPEELKLYYDGQGFMSVKMTRSEAVVLFYDVHGNILHKWSIPK******
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MGLIGEKLEIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQKQWYNVLGNHDYRGDVEAQLSPVLTRKDSRWLCSRSFILDAEIAEFVFVDTTPFVDEYFEDPGDSTYDWRGVYRRKEYLSDLLKDVDGALKNSKAKWKIVVGHHTIKSAGHHGVTKELLLRLLPILEENNVDMYVNGHDHCLQHISSNGIEFLTSGGGSKAWRGDRNWWSPEELKLYYDGQGFMSVKMTRSEAVVLFYDVHGNILHKWSIPKEPLKAA
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	265	2.2.26 [Sep-21-2011]
Q8VYU7	339	Purple acid phosphatase 4	yes	no	0.977	0.764	0.674	1e-102
Q8S341	328	Purple acid phosphatase 7	no	no	0.981	0.792	0.655	1e-100
Q8H129	366	Purple acid phosphatase 3	no	no	0.962	0.696	0.674	1e-100
Q8VYZ2	335	Purple acid phosphatase 8	no	no	0.981	0.776	0.656	1e-99
Q9SCX8	338	Purple acid phosphatase 1	no	no	1.0	0.784	0.628	4e-97
P09889	340	Tartrate-resistant acid p	yes	no	0.898	0.7	0.277	1e-20
Q05117	327	Tartrate-resistant acid p	yes	no	0.924	0.749	0.289	6e-20
O97860	325	Tartrate-resistant acid p	yes	no	0.916	0.747	0.265	1e-19
P29288	327	Tartrate-resistant acid p	yes	no	0.890	0.721	0.294	1e-19
P13686	325	Tartrate-resistant acid p	yes	no	0.905	0.738	0.28	2e-19

>sp|Q8VYU7|PPA4_ARATH Purple acid phosphatase 4 OS=Arabidopsis thaliana GN=PAP4 PE=2 SV=1

 Score =  370 bits (950), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 176/261 (67%), Positives = 207/261 (79%), Gaps = 2/261 (0%)

Query: 1   MGLIGEKLEIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQKQWYNVLGNHDYR 60
           MG IGE+++I+FV+STGDN Y++G+   +DPAF  SF++IYT+PSLQK WY VLGNHDYR
Sbjct: 69  MGRIGEEMDINFVVSTGDNIYDNGMKSIDDPAFQLSFSNIYTSPSLQKPWYLVLGNHDYR 128

Query: 61  GDVEAQLSPVLTRKDSRWLCSRSFILDAEIAEFVFVDTTPFVDEYFEDPGDSTYDWRGVY 120
           GDVEAQLSP+L   DSRW+C RSFI+DAEIAE  FVDTTPFVD YF  P D TYDW GV 
Sbjct: 129 GDVEAQLSPILRSMDSRWICMRSFIVDAEIAELFFVDTTPFVDAYFLSPQDQTYDWSGVS 188

Query: 121 RRKEYLSDLLKDVDGALKNSKAKWKIVVGHHTIKSAGHHGVTKELLLRLLPILEENNVDM 180
            RK YL  +L +++  L+ S AKWKIVVGHH IKSA  HG TKEL   LLPILE N VD+
Sbjct: 189 PRKSYLQTILTELEMGLRESSAKWKIVVGHHAIKSASIHGNTKELESLLLPILEANKVDL 248

Query: 181 YVNGHDHCLQHISSNG--IEFLTSGGGSKAWRGDRNWWSPEELKLYYDGQGFMSVKMTRS 238
           Y+NGHDHCLQHIS++   I+FLTSGGGSKAWRG  NW +PE++K +YDGQGFMSVK+TRS
Sbjct: 249 YMNGHDHCLQHISTSQSPIQFLTSGGGSKAWRGYYNWTTPEDMKFFYDGQGFMSVKITRS 308

Query: 239 EAVVLFYDVHGNILHKWSIPK 259
           E  V+FYDV GN LHKW   K
Sbjct: 309 ELSVVFYDVSGNSLHKWDTSK 329

Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 1EC: .EC: 3EC: .EC: 2

>sp|Q8S341|PPA7_ARATH Purple acid phosphatase 7 OS=Arabidopsis thaliana GN=PAP7 PE=2 SV=1

 Score =  365 bits (938), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 171/261 (65%), Positives = 211/261 (80%), Gaps = 1/261 (0%)

Query: 1   MGLIGEKLEIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQKQWYNVLGNHDYR 60
           MG++GEKL+IDFVIS GDNFY+DGL G  DP+F  SF+ IYT PSLQKQWY+VLGNHDYR
Sbjct: 64  MGVVGEKLDIDFVISVGDNFYDDGLKGVNDPSFEASFSHIYTHPSLQKQWYSVLGNHDYR 123

Query: 61  GDVEAQLSPVLTRKDSRWLCSRSFILDAEIAEFVFVDTTPFVDEYFEDPGDSTYDWRGVY 120
           G+VEAQLS VLT+KD RW C RSF+L + + +F F DT PFV++YF +P D TYDWR V 
Sbjct: 124 GNVEAQLSKVLTQKDWRWFCRRSFVLSSGMVDFFFADTNPFVEKYFTEPEDHTYDWRNVL 183

Query: 121 RRKEYLSDLLKDVDGALKNSKAKWKIVVGHHTIKSAGHHGVTKELLLRLLPILEENNVDM 180
            R +Y+S+LL D+D  +K S+A WK VVGHH IK+AG+HGVT+EL+ +LLPILEEN VD+
Sbjct: 184 PRNKYISNLLHDLDLEIKKSRATWKFVVGHHGIKTAGNHGVTQELVDQLLPILEENKVDL 243

Query: 181 YVNGHDHCLQHISSNG-IEFLTSGGGSKAWRGDRNWWSPEELKLYYDGQGFMSVKMTRSE 239
           Y+NGHDHCLQHI S+G  +FLTSGGGSKAWRG    W P+ELKLYYDGQGFMS+ +T S+
Sbjct: 244 YINGHDHCLQHIGSHGKTQFLTSGGGSKAWRGHVQPWDPKELKLYYDGQGFMSLHITHSK 303

Query: 240 AVVLFYDVHGNILHKWSIPKE 260
           A  ++YDV GN+LH+ S+ K 
Sbjct: 304 AKFIYYDVSGNVLHRSSLSKR 324

Arabidopsis thaliana (taxid: 3702)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 2

>sp|Q8H129|PPA3_ARATH Purple acid phosphatase 3 OS=Arabidopsis thaliana GN=PAP3 PE=2 SV=1

 Score =  365 bits (938), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 174/258 (67%), Positives = 209/258 (81%), Gaps = 3/258 (1%)

Query: 1   MGLIGEKLEIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQKQWYNVLGNHDYR 60
           MG IGEKL+IDFVISTGDNFY++GLT   DP F DSFT+IYTAPSLQK WY+VLGNHDYR
Sbjct: 97  MGEIGEKLDIDFVISTGDNFYDNGLTSLHDPLFQDSFTNIYTAPSLQKPWYSVLGNHDYR 156

Query: 61  GDVEAQLSPVLTRKDSRWLCSRSFILDAEIAEFVFVDTTPFVDEYFEDPGDSTYDWRGVY 120
           GDV AQLSP+L   D+RW+C RSFI++AEI +  FVDTTPFVD+YF  P    YDW GV 
Sbjct: 157 GDVRAQLSPMLRALDNRWVCMRSFIVNAEIVDLFFVDTTPFVDKYFIQPNKHVYDWSGVL 216

Query: 121 RRKEYLSDLLKDVDGALKNSKAKWKIVVGHHTIKSAGHHGVTKELLLRLLPILEENNVDM 180
            R+ YL++LLK++D AL+ S AKWKIV+GHHTIKSAGHHG T EL   LLPIL+ N VD+
Sbjct: 217 PRQTYLNNLLKELDVALRESVAKWKIVIGHHTIKSAGHHGNTIELEKHLLPILQANEVDL 276

Query: 181 YVNGHDHCLQHISS--NGIEFLTSGGGSKAWR-GDRNWWSPEELKLYYDGQGFMSVKMTR 237
           YVNGHDHCL+HISS  + I+F+TSGGGSKAW+ GD N+  PEE++ YYDGQGFMSV ++ 
Sbjct: 277 YVNGHDHCLEHISSVDSNIQFMTSGGGSKAWKGGDVNYVEPEEMRFYYDGQGFMSVHVSE 336

Query: 238 SEAVVLFYDVHGNILHKW 255
           +E  V+FYDV G++LH W
Sbjct: 337 AELRVVFYDVFGHVLHHW 354

Arabidopsis thaliana (taxid: 3702)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 2

>sp|Q8VYZ2|PPA8_ARATH Purple acid phosphatase 8 OS=Arabidopsis thaliana GN=PAP8 PE=2 SV=1

 Score =  362 bits (930), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 172/262 (65%), Positives = 208/262 (79%), Gaps = 2/262 (0%)

Query: 1   MGLIGEKLEIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQKQWYNVLGNHDYR 60
           MG IG+ L IDF+ISTGDNFY+DG+    D  F DSFT+IYTA SLQK WYNVLGNHDYR
Sbjct: 68  MGKIGKDLNIDFLISTGDNFYDDGIISPYDSQFQDSFTNIYTATSLQKPWYNVLGNHDYR 127

Query: 61  GDVEAQLSPVLTRKDSRWLCSRSFILDAEIAEFVFVDTTPFVDEYFEDPGDSTYDWRGVY 120
           G+V AQLSP+L   D RW+C RS++++AEI +  FVDTTPFVD YF++P D  YDWRGV 
Sbjct: 128 GNVYAQLSPILRDLDCRWICLRSYVVNAEIVDIFFVDTTPFVDRYFDEPKDHVYDWRGVL 187

Query: 121 RRKEYLSDLLKDVDGALKNSKAKWKIVVGHHTIKSAGHHGVTKELLLRLLPILEENNVDM 180
            R +YL+ LL DVD AL+ S AKWKIVVGHHTIKSAGHHG T EL  +LLPILE N VD+
Sbjct: 188 PRNKYLNSLLTDVDVALQESMAKWKIVVGHHTIKSAGHHGNTIELEKQLLPILEANEVDL 247

Query: 181 YVNGHDHCLQHISS--NGIEFLTSGGGSKAWRGDRNWWSPEELKLYYDGQGFMSVKMTRS 238
           Y+NGHDHCL+HISS  +GI+F+TSGGGSKAW+GD N W+P+E++ YYDGQGFMSV  + +
Sbjct: 248 YINGHDHCLEHISSINSGIQFMTSGGGSKAWKGDVNDWNPQEMRFYYDGQGFMSVYTSEA 307

Query: 239 EAVVLFYDVHGNILHKWSIPKE 260
           E  V+FYD  G++LH+WS  K 
Sbjct: 308 ELRVVFYDGLGHVLHRWSTLKN 329

Arabidopsis thaliana (taxid: 3702)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 2

>sp|Q9SCX8|PPA17_ARATH Purple acid phosphatase 17 OS=Arabidopsis thaliana GN=PAP17 PE=2 SV=1

 Score =  354 bits (908), Expect = 4e-97,   Method: Compositional matrix adjust.
 Identities = 169/269 (62%), Positives = 209/269 (77%), Gaps = 4/269 (1%)

Query: 1   MGLIGEKLEIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQKQWYNVLGNHDYR 60
           MG IGEK+++DFV+STGDNFY++GL  E DP F  SF++IYTAPSLQKQWY+VLGNHDYR
Sbjct: 69  MGKIGEKIDLDFVVSTGDNFYDNGLFSEHDPNFEQSFSNIYTAPSLQKQWYSVLGNHDYR 128

Query: 61  GDVEAQLSPVLTRKDSRWLCSRSFILDAEIAEFVFVDTTPFVDEYFEDPGDSTYDWRGVY 120
           GD EAQLS VL   DSRW+C RSF++DAE+ E  FVDTTPFV EY+ +    +YDWR V 
Sbjct: 129 GDAEAQLSSVLREIDSRWICLRSFVVDAELVEMFFVDTTPFVKEYYTEADGHSYDWRAVP 188

Query: 121 RRKEYLSDLLKDVDGALKNSKAKWKIVVGHHTIKSAGHHGVTKELLLRLLPILEENNVDM 180
            R  Y+  LL+D++ +LK+SKA+WKIVVGHH ++S GHHG TKEL   LLPIL+EN VD+
Sbjct: 189 SRNSYVKALLRDLEVSLKSSKARWKIVVGHHAMRSIGHHGDTKELNEELLPILKENGVDL 248

Query: 181 YVNGHDHCLQHIS--SNGIEFLTSGGGSKAWRGDRN--WWSPEELKLYYDGQGFMSVKMT 236
           Y+NGHDHCLQH+S   + I+FLTSG GSKAWRGD N    +P+ LK YYDGQGFMS + T
Sbjct: 249 YMNGHDHCLQHMSDEDSPIQFLTSGAGSKAWRGDINPVTINPKLLKFYYDGQGFMSARFT 308

Query: 237 RSEAVVLFYDVHGNILHKWSIPKEPLKAA 265
            S+A ++FYDV G ILHKW   K+ L ++
Sbjct: 309 HSDAEIVFYDVFGEILHKWVTSKQLLHSS 337

Metallo-phosphoesterase involved in phosphate metabolism. Has a peroxidase activity.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: .

EC: 7

>sp|P09889|PPA5_PIG Tartrate-resistant acid phosphatase type 5 OS=Sus scrofa GN=ACP5 PE=1 SV=4

 Score =  100 bits (249), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 78/281 (27%), Positives = 136/281 (48%), Gaps = 43/281 (15%)

Query: 6   EKLEIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQK-QWYNVLGNHDYRGDVE 64
           + L  DF++S GDNFY  G+   +D  F ++F  +++ PSL+   W+ + GNHD+ G+V 
Sbjct: 67  KTLGADFILSLGDNFYFTGVHDAKDKRFQETFEDVFSDPSLRNVPWHVLAGNHDHLGNVS 126

Query: 65  AQLSPVLTRKDSRWLCSRSF------ILDAEIAEFVFV--------DTTPFVDEYFEDPG 110
           AQ++   ++   RW     +      I  + ++  +F+        ++  FV +  E P 
Sbjct: 127 AQIA--YSKISKRWNFPSPYYRLRFKIPRSNVSVAIFMLDTVTLCGNSDDFVSQQPERP- 183

Query: 111 DSTYDWRGVYRRKEYLSDLLKDVDGALKNSKAKWKIVVGHHTIKSAGHHGVTKELLLRLL 170
                 R +   +  L+ + K +  A    K  + +V GH+ + S   HG T  L+ +LL
Sbjct: 184 ------RNLALARTQLAWIKKQLAAA----KEDYVLVAGHYPVWSIAEHGPTHCLVKQLL 233

Query: 171 PILEENNVDMYVNGHDHCLQHIS-SNGIEFLTSGGGS------KAWRGDRNWWSPEELKL 223
           P+L  + V  Y+ GHDH LQ++   NG+ F+ SG G+      K  R   N +    L+ 
Sbjct: 234 PLLTTHKVTAYLCGHDHNLQYLQDENGLGFVLSGAGNFMDPSKKHLRKVPNGY----LRF 289

Query: 224 YYDGQ----GFMSVKMTRSEAVVLFYDVHGNILHKWSIPKE 260
           ++  +    GF  V++T  E  V + +  G  L K  +P+ 
Sbjct: 290 HFGAENSLGGFAYVEITPKEMSVTYIEASGKSLFKTKLPRR 330

Uteroferrin is a phosphoprotein phosphatase, synthesized in response to progesterone. It appears to function in transplacental transport of iron in pig.

Sus scrofa (taxid: 9823)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 2

>sp|Q05117|PPA5_MOUSE Tartrate-resistant acid phosphatase type 5 OS=Mus musculus GN=Acp5 PE=2 SV=2

 Score = 98.2 bits (243), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 80/276 (28%), Positives = 133/276 (48%), Gaps = 31/276 (11%)

Query: 6   EKLEIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQK-QWYNVLGNHDYRGDVE 64
           + +  DF++S GDNFY  G+    D  F ++F  +++  +L+   WY + GNHD+ G+V 
Sbjct: 61  QTMGADFIMSLGDNFYFTGVHDASDKRFQETFEDVFSDRALRNIPWYVLAGNHDHLGNVS 120

Query: 65  AQLSPVLTRKDSRWLCSRSF------ILDAEIAEFVFVDTTPFV----DEYFEDPGDSTY 114
           AQ++   ++   RW     +      I    I   +F+  T  +    D++         
Sbjct: 121 AQIA--YSKISKRWNFPSPYYRLRFKIPRTNITVAIFMLDTVMLCGNSDDFASQQPKMPR 178

Query: 115 DWRGVYRRKEYLSDLLKDVDGALKNSKAKWKIVVGHHTIKSAGHHGVTKELLLRLLPILE 174
           D  GV R +  LS L K +  A    K  + +V GH+ I S   HG T+ L+  L P+L 
Sbjct: 179 DL-GVARTQ--LSWLKKQLAAA----KEDYVLVAGHYPIWSIAEHGPTRCLVKNLRPLLA 231

Query: 175 ENNVDMYVNGHDHCLQHIS-SNGIEFLTSGGGS---KAWRGDRNWWSPEE-LKLYYDGQ- 228
              V  Y+ GHDH LQ++   NG+ ++ SG G+    + R  R    P   L+ +Y  + 
Sbjct: 232 TYGVTAYLCGHDHNLQYLQDENGVGYVLSGAGNFMDPSVRHQRK--VPNGYLRFHYGSED 289

Query: 229 ---GFMSVKMTRSEAVVLFYDVHGNILHKWSIPKEP 261
              GF  V+++  E  +++ +  G  L K S+P+ P
Sbjct: 290 SLGGFTHVEISPKEMTIIYVEASGKSLFKTSLPRRP 325

May play a role in the process of bone resorption. The osteoclastic trap acts on nucleotide tri- and diphosphates with higher affinity, compared with other substrates.

Mus musculus (taxid: 10090)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 2

>sp|O97860|PPA5_RABIT Tartrate-resistant acid phosphatase type 5 OS=Oryctolagus cuniculus GN=ACP5 PE=2 SV=1

 Score = 97.1 bits (240), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 76/286 (26%), Positives = 132/286 (46%), Gaps = 43/286 (15%)

Query: 1   MGLIGEKLEIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQK-QWYNVLGNHDY 59
           +G + + L   F++S GDNFY  G+    D  F ++F  +++  SLQ   WY + GNHD+
Sbjct: 54  IGKVVQMLGAHFILSLGDNFYFSGVQSVSDKRFQETFEDVFSDRSLQNVPWYVLAGNHDH 113

Query: 60  RGDVEAQLSPVLTRKDSRWLCSRSF------ILDAEIAEFVFV--------DTTPFVDEY 105
            G+V AQ++   ++   RW     F      I    ++  +++        ++  F+ + 
Sbjct: 114 IGNVSAQIA--YSKVSKRWNFPSPFYRLRFRIPRTNVSVAIYMLDTVTLCGNSNDFLSQQ 171

Query: 106 FEDPGDSTYDWRGVYRRKEYLSDLLKDVDGALKNSKAKWKIVVGHHTIKSAGHHGVTKEL 165
            E P           R  E     L  +   L ++K  + +V GH+ + S   HG T  L
Sbjct: 172 PERP-----------RNLELARTQLAWLKRHLADAKEDYVLVAGHYPVWSIAEHGPTHCL 220

Query: 166 LLRLLPILEENNVDMYVNGHDHCLQHIS-SNGIEFLTSGGG------SKAWRGDRNWWSP 218
           + +L P+L +  V  Y+ GHDH LQ++   NG+ ++ SG G      ++  R   N +  
Sbjct: 221 VKKLQPLLVKYGVTAYLCGHDHNLQYLQDENGVGYVLSGAGNFMDPSTQHQRSVPNGY-- 278

Query: 219 EELKLYYDGQ----GFMSVKMTRSEAVVLFYDVHGNILHKWSIPKE 260
             L+ +Y  +    GF  +++T  E  V + +  G  L K  +PK 
Sbjct: 279 --LRFHYGAENSLGGFAYLEITPKEMTVTYMEASGKSLFKTRLPKR 322

Oryctolagus cuniculus (taxid: 9986)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 2

>sp|P29288|PPA5_RAT Tartrate-resistant acid phosphatase type 5 OS=Rattus norvegicus GN=Acp5 PE=1 SV=1

 Score = 97.1 bits (240), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 81/275 (29%), Positives = 132/275 (48%), Gaps = 39/275 (14%)

Query: 11  DFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQK-QWYNVLGNHDYRGDVEAQLSP 69
           DF++S GDNFY  G+    D  F ++F  +++  +L+   WY + GNHD+ G+V AQ++ 
Sbjct: 66  DFIMSLGDNFYFTGVHDANDKRFQETFEDVFSDRALRNIPWYVLAGNHDHLGNVSAQIA- 124

Query: 70  VLTRKDSRWLCSRSF------ILDAEIAEFVFV--------DTTPFVDEYFEDPGDSTYD 115
             ++   RW     +      +  + I   +F+        ++  FV +  E P D    
Sbjct: 125 -YSKISKRWNFPSPYYRLRFKVPRSNITVAIFMLDTVMLCGNSDDFVSQQPEMPRD---- 179

Query: 116 WRGVYRRKEYLSDLLKDVDGALKNSKAKWKIVVGHHTIKSAGHHGVTKELLLRLLPILEE 175
             GV R +  LS L K +  A    K  + +V GH+ I S   HG T+ L+  L P+L  
Sbjct: 180 -LGVARTQ--LSWLKKQLAAA----KEDYVLVAGHYPIWSIAEHGPTRCLVKNLRPLLAA 232

Query: 176 NNVDMYVNGHDHCLQHIS-SNGIEFLTSGGGS---KAWRGDRNWWSPEE-LKLYYDGQ-- 228
             V  Y+ GHDH LQ++   NG+ ++ SG G+    + R  R    P   L+ +Y  +  
Sbjct: 233 YGVTAYLCGHDHNLQYLQDENGVGYVLSGAGNFMDPSVRHQRK--VPNGYLRFHYGSEDS 290

Query: 229 --GFMSVKMTRSEAVVLFYDVHGNILHKWSIPKEP 261
             GF  V++   E  + + +  G  L K S+P+ P
Sbjct: 291 LGGFTYVEIGSKEMSITYVEASGKSLFKTSLPRRP 325

May play a role in the process of bone resorption. The osteoclastic trap acts on nucleotide tri- and diphosphates with higher affinity, compared with other substrates.

Rattus norvegicus (taxid: 10116)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 2

>sp|P13686|PPA5_HUMAN Tartrate-resistant acid phosphatase type 5 OS=Homo sapiens GN=ACP5 PE=1 SV=3

 Score = 96.3 bits (238), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 77/275 (28%), Positives = 129/275 (46%), Gaps = 35/275 (12%)

Query: 8   LEIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQK-QWYNVLGNHDYRGDVEAQ 66
           L  DF++S GDNFY  G+    D  F ++F  +++  SL+K  WY + GNHD+ G+V AQ
Sbjct: 61  LGADFILSLGDNFYFTGVQDINDKRFQETFEDVFSDRSLRKVPWYVLAGNHDHLGNVSAQ 120

Query: 67  LSPVLTRKDSRWLCSRSF------ILDAEIAEFVFV--------DTTPFVDEYFEDPGDS 112
           ++   ++   RW     F      I    ++  +F+        ++  F+ +  E P   
Sbjct: 121 IA--YSKISKRWNFPSPFYRLHFKIPQTNVSVAIFMLDTVTLCGNSDDFLSQQPERP--- 175

Query: 113 TYDWRGVYRRKEYLSDLLKDVDGALKNSKAKWKIVVGHHTIKSAGHHGVTKELLLRLLPI 172
               R V   +  LS L K +  A    +  + +V GH+ + S   HG T  L+ +L P+
Sbjct: 176 ----RDVKLARTQLSWLKKQLAAA----REDYVLVAGHYPVWSIAEHGPTHCLVKQLRPL 227

Query: 173 LEENNVDMYVNGHDHCLQHIS-SNGIEFLTSGGGSKAWRGDRNWWSPEE--LKLYYDGQ- 228
           L    V  Y+ GHDH LQ++   NG+ ++ SG G+      R+        L+ +Y  + 
Sbjct: 228 LATYGVTAYLCGHDHNLQYLQDENGVGYVLSGAGNFMDPSKRHQRKVPNGYLRFHYGTED 287

Query: 229 ---GFMSVKMTRSEAVVLFYDVHGNILHKWSIPKE 260
              GF  V+++  E  V + +  G  L K  +P+ 
Sbjct: 288 SLGGFAYVEISSKEMTVTYIEASGKSLFKTRLPRR 322

Involved in osteopontin/bone sialoprotein dephosphorylation. Its expression seems to increase in certain pathological states such as Gaucher and Hodgkin diseases, the hairy cell, the B-cell, and the T-cell leukemias.

Homo sapiens (taxid: 9606)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 2

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	265
225424458	324	PREDICTED: purple acid phosphatase 3 iso	0.981	0.802	0.721	1e-110
224101935	325	predicted protein [Populus trichocarpa]	0.981	0.8	0.717	1e-110
356525044	335	PREDICTED: purple acid phosphatase 8-lik	1.0	0.791	0.715	1e-109
255645604	335	unknown [Glycine max]	1.0	0.791	0.707	1e-108
47716659	328	purple acid phosphatase 1 [Solanum tuber	0.981	0.792	0.679	1e-108
359806222	335	uncharacterized protein LOC100818610 pre	1.0	0.791	0.715	1e-108
388494508	324	unknown [Lotus japonicus]	0.981	0.802	0.694	1e-107
449504800	536	PREDICTED: purple acid phosphatase 17-li	0.984	0.486	0.693	1e-107
358343459	337	Purple acid phosphatase [Medicago trunca	1.0	0.786	0.696	1e-106
225734528	330	purple acid phosphatase 3 [Phaseolus vul	0.981	0.787	0.725	1e-106

>gi|225424458|ref|XP_002285160.1| PREDICTED: purple acid phosphatase 3 isoform 1 [Vitis vinifera] gi|297737582|emb|CBI26783.3| unnamed protein product [Vitis vinifera]

 Score =  404 bits (1037), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 189/262 (72%), Positives = 223/262 (85%), Gaps = 2/262 (0%)

Query: 1   MGLIGEKLEIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQKQWYNVLGNHDYR 60
           MG +GE+L+IDFV+STGDNFY++GL+G  D AF  SF+ +YTAPSLQKQWYNVLGNHDYR
Sbjct: 58  MGRVGEELDIDFVVSTGDNFYDNGLSGIHDTAFEKSFSKVYTAPSLQKQWYNVLGNHDYR 117

Query: 61  GDVEAQLSPVLTRKDSRWLCSRSFILDAEIAEFVFVDTTPFVDEYFEDPGDSTYDWRGVY 120
           G VEAQLSP+LT+ DSRWLC RSFIL+AEI EF FVDTTPFVD+YF DP D  YDW+GV 
Sbjct: 118 GKVEAQLSPILTKMDSRWLCLRSFILNAEIVEFFFVDTTPFVDKYFTDPEDHDYDWKGVL 177

Query: 121 RRKEYLSDLLKDVDGALKNSKAKWKIVVGHHTIKSAGHHGVTKELLLRLLPILEENNVDM 180
            R+ YLS+LL+DVD AL++S AKWKIVVGHHTI+SAGHHG T EL+ +LLPIL+ N+VD+
Sbjct: 178 PRQAYLSNLLQDVDTALRDSTAKWKIVVGHHTIRSAGHHGDTVELVDQLLPILQANSVDL 237

Query: 181 YVNGHDHCLQHISS--NGIEFLTSGGGSKAWRGDRNWWSPEELKLYYDGQGFMSVKMTRS 238
           Y+NGHDHCL+HISS  + I+FLTSGGGSKAWRGD  WW+PEELK YYDGQGFMSV++T S
Sbjct: 238 YINGHDHCLEHISSPDSPIQFLTSGGGSKAWRGDVQWWNPEELKFYYDGQGFMSVQITAS 297

Query: 239 EAVVLFYDVHGNILHKWSIPKE 260
           +  V FYDV G +LHKWS  KE
Sbjct: 298 QVDVAFYDVFGEVLHKWSTSKE 319

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224101935|ref|XP_002312482.1| predicted protein [Populus trichocarpa] gi|222852302|gb|EEE89849.1| predicted protein [Populus trichocarpa]

 Score =  403 bits (1035), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 188/262 (71%), Positives = 222/262 (84%), Gaps = 2/262 (0%)

Query: 1   MGLIGEKLEIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQKQWYNVLGNHDYR 60
           MG++GEKL+IDF+ISTGDNFYE GL G +DPAF +SFT IYTAPSLQKQWYNVLGNHDYR
Sbjct: 58  MGIMGEKLDIDFIISTGDNFYEGGLNGVDDPAFYESFTRIYTAPSLQKQWYNVLGNHDYR 117

Query: 61  GDVEAQLSPVLTRKDSRWLCSRSFILDAEIAEFVFVDTTPFVDEYFEDPGDSTYDWRGVY 120
           GDVEAQLSPVL   DS+WLC RSFI++ EIAEF FVDTTPFV++YF +P D  YDW G+ 
Sbjct: 118 GDVEAQLSPVLREMDSKWLCLRSFIVNTEIAEFFFVDTTPFVNKYFLEPKDHVYDWSGIL 177

Query: 121 RRKEYLSDLLKDVDGALKNSKAKWKIVVGHHTIKSAGHHGVTKELLLRLLPILEENNVDM 180
            RK YLS++L+D+D ALK S AKWKIVVGHHTIKSAG HG T EL L+LLPIL+ NNVD+
Sbjct: 178 PRKSYLSNVLEDLDMALKESVAKWKIVVGHHTIKSAGQHGNTVELNLQLLPILQANNVDL 237

Query: 181 YVNGHDHCLQHISS--NGIEFLTSGGGSKAWRGDRNWWSPEELKLYYDGQGFMSVKMTRS 238
           Y+NGHDHCL+HISS  + ++FLTSGGGSKAWRGD  WW P+E+K YYDGQGFMSV++T++
Sbjct: 238 YINGHDHCLEHISSSESPLQFLTSGGGSKAWRGDVAWWDPKEMKFYYDGQGFMSVQITQT 297

Query: 239 EAVVLFYDVHGNILHKWSIPKE 260
           E  V+FYDV G +LHKWS  K+
Sbjct: 298 EVDVVFYDVSGEVLHKWSRTKQ 319

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356525044|ref|XP_003531137.1| PREDICTED: purple acid phosphatase 8-like [Glycine max]

 Score =  401 bits (1030), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 191/267 (71%), Positives = 217/267 (81%), Gaps = 2/267 (0%)

Query: 1   MGLIGEKLEIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQKQWYNVLGNHDYR 60
           MG++GEKL+IDFVISTGDNFYEDGL G +DPAF  SF  +YTAPSLQK WY VLGNHDYR
Sbjct: 67  MGIVGEKLDIDFVISTGDNFYEDGLKGVDDPAFYQSFIHMYTAPSLQKTWYTVLGNHDYR 126

Query: 61  GDVEAQLSPVLTRKDSRWLCSRSFILDAEIAEFVFVDTTPFVDEYFEDPGDSTYDWRGVY 120
           GDVEAQLSP+L +KDSRWLC RSFILD EI EF FVDTTPFV+EYF DPG+ TYDW GV 
Sbjct: 127 GDVEAQLSPILKQKDSRWLCMRSFILDGEIVEFFFVDTTPFVEEYFTDPGEHTYDWEGVL 186

Query: 121 RRKEYLSDLLKDVDGALKNSKAKWKIVVGHHTIKSAGHHGVTKELLLRLLPILEENNVDM 180
            R  Y+S LLKDVD AL  SKAKWK+VVGHHTI SAGHHG T++L   L+PILE NNVD 
Sbjct: 187 PRLAYVSKLLKDVDSALAQSKAKWKMVVGHHTINSAGHHGSTEDLKQLLVPILEANNVDA 246

Query: 181 YVNGHDHCLQHI--SSNGIEFLTSGGGSKAWRGDRNWWSPEELKLYYDGQGFMSVKMTRS 238
           Y+NGHDHCLQHI  ++NGI F+TSGGGSKAW GD   W  EELKLYYDGQGFMS+++T+S
Sbjct: 247 YINGHDHCLQHIIDNNNGIHFITSGGGSKAWSGDVKPWKLEELKLYYDGQGFMSMQITKS 306

Query: 239 EAVVLFYDVHGNILHKWSIPKEPLKAA 265
            A ++FYD  G +LH WSI K+   AA
Sbjct: 307 TAYIIFYDAFGKVLHTWSISKDRNVAA 333

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255645604|gb|ACU23296.1| unknown [Glycine max]

 Score =  397 bits (1021), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 189/267 (70%), Positives = 216/267 (80%), Gaps = 2/267 (0%)

Query: 1   MGLIGEKLEIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQKQWYNVLGNHDYR 60
           MG++GEKL+IDFVISTGDNFYE+GL G +DPAF  SF  +YTAPSLQK WY VLGNHDYR
Sbjct: 67  MGIVGEKLDIDFVISTGDNFYENGLKGVDDPAFYQSFIHMYTAPSLQKTWYTVLGNHDYR 126

Query: 61  GDVEAQLSPVLTRKDSRWLCSRSFILDAEIAEFVFVDTTPFVDEYFEDPGDSTYDWRGVY 120
           GDVEAQLSP+L +KDSRWLC RSFILD EI EF FVD TPFV+EYF DPG+ TYDW GV 
Sbjct: 127 GDVEAQLSPILKQKDSRWLCMRSFILDGEIVEFFFVDMTPFVEEYFTDPGEHTYDWEGVL 186

Query: 121 RRKEYLSDLLKDVDGALKNSKAKWKIVVGHHTIKSAGHHGVTKELLLRLLPILEENNVDM 180
            R  Y+S LLKDVD AL  SKAKWK+VVGHHTI SAGHHG T++L   L+PILE NNVD 
Sbjct: 187 PRLAYVSKLLKDVDSALAQSKAKWKMVVGHHTINSAGHHGSTEDLKQLLVPILEANNVDA 246

Query: 181 YVNGHDHCLQHI--SSNGIEFLTSGGGSKAWRGDRNWWSPEELKLYYDGQGFMSVKMTRS 238
           Y+NGHDHCLQHI  ++NGI F+TSGGGSKAW GD   W  EELKLYYDGQGFMS+++T+S
Sbjct: 247 YINGHDHCLQHIIDNNNGIHFITSGGGSKAWSGDVKPWKLEELKLYYDGQGFMSMQITKS 306

Query: 239 EAVVLFYDVHGNILHKWSIPKEPLKAA 265
            A ++FYD  G +LH WSI K+   AA
Sbjct: 307 TAYIIFYDAFGKVLHTWSISKDRNVAA 333

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|47716659|gb|AAT37529.1| purple acid phosphatase 1 [Solanum tuberosum]

 Score =  397 bits (1019), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 178/262 (67%), Positives = 222/262 (84%), Gaps = 2/262 (0%)

Query: 1   MGLIGEKLEIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQKQWYNVLGNHDYR 60
           MG+IGEKL IDFV+STGDNFY+DGLTG +DPAF +SFT++YTAPSLQK WYNVLGNHDYR
Sbjct: 62  MGIIGEKLNIDFVVSTGDNFYDDGLTGVDDPAFEESFTNVYTAPSLQKNWYNVLGNHDYR 121

Query: 61  GDVEAQLSPVLTRKDSRWLCSRSFILDAEIAEFVFVDTTPFVDEYFEDPGDSTYDWRGVY 120
           GD  AQLSP+L +KD+RW+C RS+I++ ++AEF FVDTTPF D YF  P D TYDWR V 
Sbjct: 122 GDALAQLSPILKQKDNRWICMRSYIVNTDVAEFFFVDTTPFQDMYFTTPKDHTYDWRNVM 181

Query: 121 RRKEYLSDLLKDVDGALKNSKAKWKIVVGHHTIKSAGHHGVTKELLLRLLPILEENNVDM 180
            RK+YLS +LKD+D AL+ S AKWKIVVGHHTIKSAGHHG ++EL + +LPIL+ NNVD 
Sbjct: 182 PRKDYLSQVLKDLDSALRESSAKWKIVVGHHTIKSAGHHGSSEELGVHILPILQANNVDF 241

Query: 181 YVNGHDHCLQHISSNG--IEFLTSGGGSKAWRGDRNWWSPEELKLYYDGQGFMSVKMTRS 238
           Y+NGHDHCL+HISS+   ++FLTSGGGSK+WRGD NWW+P+E+K YYDGQGFM++++T++
Sbjct: 242 YLNGHDHCLEHISSSDSPLQFLTSGGGSKSWRGDMNWWNPKEMKFYYDGQGFMAMQITQT 301

Query: 239 EAVVLFYDVHGNILHKWSIPKE 260
           +  + F+D+ GNILHKWS  K 
Sbjct: 302 QVWIQFFDIFGNILHKWSASKN 323

Source: Solanum tuberosum

Species: Solanum tuberosum

Genus: Solanum

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359806222|ref|NP_001241208.1| uncharacterized protein LOC100818610 precursor [Glycine max] gi|255646028|gb|ACU23501.1| unknown [Glycine max]

 Score =  396 bits (1018), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 191/267 (71%), Positives = 216/267 (80%), Gaps = 2/267 (0%)

Query: 1   MGLIGEKLEIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQKQWYNVLGNHDYR 60
           MG++GEKL+IDFVISTGDNFYEDGL G +DPAF  SF  +YTAPSLQK WY VLGNHDYR
Sbjct: 67  MGIVGEKLDIDFVISTGDNFYEDGLKGVDDPAFYQSFVDMYTAPSLQKTWYTVLGNHDYR 126

Query: 61  GDVEAQLSPVLTRKDSRWLCSRSFILDAEIAEFVFVDTTPFVDEYFEDPGDSTYDWRGVY 120
           GDV AQLSP+L +KDSRWLC RSFILD EI EF FVDTTPFV+EYF DPG+ TYDW GV 
Sbjct: 127 GDVGAQLSPILKQKDSRWLCMRSFILDGEIVEFFFVDTTPFVEEYFTDPGEHTYDWEGVL 186

Query: 121 RRKEYLSDLLKDVDGALKNSKAKWKIVVGHHTIKSAGHHGVTKELLLRLLPILEENNVDM 180
            R  YLS+LLKDVD AL  SKAKWK+VVGHHTI SAGHHG T+EL   L+PILE N+VD 
Sbjct: 187 PRLAYLSELLKDVDLALAQSKAKWKMVVGHHTINSAGHHGNTEELKQLLVPILEANDVDA 246

Query: 181 YVNGHDHCLQHISSN--GIEFLTSGGGSKAWRGDRNWWSPEELKLYYDGQGFMSVKMTRS 238
           Y+NGHDHCLQHI  N  GI F+TSGGGSKAW GD   W  EELKLYYDGQGFMS+++T+S
Sbjct: 247 YINGHDHCLQHIIDNNSGIHFITSGGGSKAWSGDVKPWKLEELKLYYDGQGFMSMQITKS 306

Query: 239 EAVVLFYDVHGNILHKWSIPKEPLKAA 265
           +A ++FYD  G +LH WSI K+   AA
Sbjct: 307 KADIIFYDAFGKVLHTWSISKDRNVAA 333

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388494508|gb|AFK35320.1| unknown [Lotus japonicus]

 Score =  395 bits (1014), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 182/262 (69%), Positives = 223/262 (85%), Gaps = 2/262 (0%)

Query: 1   MGLIGEKLEIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQKQWYNVLGNHDYR 60
           MG+IGE+L+IDFVISTGDNFY+DGL G +D AF  SFT IYTAPSLQK WYNVLGNHDYR
Sbjct: 58  MGVIGEQLDIDFVISTGDNFYDDGLRGIDDAAFNYSFTKIYTAPSLQKPWYNVLGNHDYR 117

Query: 61  GDVEAQLSPVLTRKDSRWLCSRSFILDAEIAEFVFVDTTPFVDEYFEDPGDSTYDWRGVY 120
           GDVEAQLSPVLT  D RW+C RS++++AE+AEF FVDTTPFV +YF +P D  YDW G+ 
Sbjct: 118 GDVEAQLSPVLTNLDKRWVCLRSYVVNAEVAEFFFVDTTPFVGKYFTEPEDHVYDWSGIG 177

Query: 121 RRKEYLSDLLKDVDGALKNSKAKWKIVVGHHTIKSAGHHGVTKELLLRLLPILEENNVDM 180
            R++Y+S++L+DVD AL+ S AKWKIVVGHH I+SAGHHG TKEL+ +LLPILE NN+D+
Sbjct: 178 PREQYISNILEDVDLALRESNAKWKIVVGHHAIRSAGHHGDTKELVNQLLPILEANNIDL 237

Query: 181 YVNGHDHCLQHISS--NGIEFLTSGGGSKAWRGDRNWWSPEELKLYYDGQGFMSVKMTRS 238
           ++NGHDHCLQHISS  +GI+FLTSGGG KAW+GD  WW PEE+KLY+DGQGFMSVK+T++
Sbjct: 238 FINGHDHCLQHISSLDSGIQFLTSGGGFKAWKGDVKWWVPEEMKLYHDGQGFMSVKITQT 297

Query: 239 EAVVLFYDVHGNILHKWSIPKE 260
           +  + FYDV GN+LHKW+  K+
Sbjct: 298 QVDIAFYDVFGNVLHKWNTSKQ 319

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449504800|ref|XP_004162298.1| PREDICTED: purple acid phosphatase 17-like [Cucumis sativus]

 Score =  393 bits (1010), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 183/264 (69%), Positives = 218/264 (82%), Gaps = 3/264 (1%)

Query: 1   MGLIGEKLEIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQKQWYNVLGNHDYR 60
           MG+IGEKLE+DFVISTGDNFY+ GL G EDP F +SF+ IYTAPSLQK+WY+VLGNHDYR
Sbjct: 269 MGIIGEKLEVDFVISTGDNFYDRGLKGTEDPEFEESFSKIYTAPSLQKEWYSVLGNHDYR 328

Query: 61  GDVEAQLSPVLTRKDSRWLCSRSFILDAEIAEFVFVDTTPFVDEYFEDPGDSTYDWRGVY 120
           GDVEAQLSP+L + D+RW+C RSFI+D EI EF FVDTTPFVD+YF DP D  YDW+ + 
Sbjct: 329 GDVEAQLSPILKKMDNRWICLRSFIVDTEIVEFFFVDTTPFVDKYFNDPEDEIYDWKAIL 388

Query: 121 RRKEYLSDLLKDVDGALKNSKAKWKIVVGHHTIKSAGHHGVTKELLLRLLPILEENNVDM 180
            R++YLS+LLK+ D ALK+S AKWKIVVGHHT+KSAG HG T+EL  +LLPILEEN VD 
Sbjct: 389 PRRKYLSNLLKEFDSALKDSNAKWKIVVGHHTLKSAGSHGDTQELHHQLLPILEENKVDF 448

Query: 181 YVNGHDHCLQHISSNG--IEFLTSGGGSKAWRGDRNWWSPEELKLYYDGQGFMSVKMTRS 238
           Y+NGHDHCLQHISS    +++ TSGGGSKAWRGD NW  P+ELK YYDGQGFMS+++  S
Sbjct: 449 YLNGHDHCLQHISSTNSPLQYFTSGGGSKAWRGDINWMDPKELKFYYDGQGFMSLQINPS 508

Query: 239 EAVVLFYDVHGNILHKWSIPKEPL 262
           +A   F+D+ GNILH+WS  K PL
Sbjct: 509 QANFTFFDIFGNILHQWSSTK-PL 531

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|358343459|ref|XP_003635819.1| Purple acid phosphatase [Medicago truncatula] gi|355501754|gb|AES82957.1| Purple acid phosphatase [Medicago truncatula]

 Score =  391 bits (1005), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 186/267 (69%), Positives = 218/267 (81%), Gaps = 2/267 (0%)

Query: 1   MGLIGEKLEIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQKQWYNVLGNHDYR 60
           MG++GEKL IDFVISTGDNFYEDGL G +DPAF +SF +IYTAPSLQK WYNVLGNHDYR
Sbjct: 71  MGIVGEKLNIDFVISTGDNFYEDGLKGVDDPAFYESFANIYTAPSLQKVWYNVLGNHDYR 130

Query: 61  GDVEAQLSPVLTRKDSRWLCSRSFILDAEIAEFVFVDTTPFVDEYFEDPGDSTYDWRGVY 120
           GDVEAQLSP+L  KDSRW+C RSFILD  I EF FVDTTPFV++YF DP + TYDW GV 
Sbjct: 131 GDVEAQLSPILRLKDSRWVCLRSFILDGGIVEFFFVDTTPFVEKYFTDPEEHTYDWNGVL 190

Query: 121 RRKEYLSDLLKDVDGALKNSKAKWKIVVGHHTIKSAGHHGVTKELLLRLLPILEENNVDM 180
            R+ Y + LLKDV+ +L  SKAKWKIVVGHHTIK+AGHHG T+EL  +LLPIL+ NN+D 
Sbjct: 191 PRESYRAKLLKDVNSSLVQSKAKWKIVVGHHTIKTAGHHGNTQELEEQLLPILKSNNIDA 250

Query: 181 YVNGHDHCLQHI--SSNGIEFLTSGGGSKAWRGDRNWWSPEELKLYYDGQGFMSVKMTRS 238
           Y+NGHDHCL+HI    +GI F TSGGGSKAWRGD   W P+ELKLY+DGQGFMSV++T +
Sbjct: 251 YINGHDHCLEHIIDKESGIPFFTSGGGSKAWRGDIRPWDPKELKLYHDGQGFMSVQITEN 310

Query: 239 EAVVLFYDVHGNILHKWSIPKEPLKAA 265
            A ++FYDV G +LH+W+I KE   AA
Sbjct: 311 NADIVFYDVFGKVLHRWNITKEMSAAA 337

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225734528|gb|ACO25293.1| purple acid phosphatase 3 [Phaseolus vulgaris]

 Score =  391 bits (1004), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 190/262 (72%), Positives = 212/262 (80%), Gaps = 2/262 (0%)

Query: 1   MGLIGEKLEIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQKQWYNVLGNHDYR 60
           MG++GEKL+IDFVISTGDNFYEDGL G +DPAF  SF  IYTA SLQK WY+VLGNHDYR
Sbjct: 68  MGIVGEKLDIDFVISTGDNFYEDGLKGVDDPAFYSSFVDIYTAHSLQKTWYSVLGNHDYR 127

Query: 61  GDVEAQLSPVLTRKDSRWLCSRSFILDAEIAEFVFVDTTPFVDEYFEDPGDSTYDWRGVY 120
           GDVEAQLSP L +KDSRWLC RSFILD EI EF FVDTTPFVDEYF DPG+ TYDW GV 
Sbjct: 128 GDVEAQLSPALKQKDSRWLCLRSFILDGEIVEFFFVDTTPFVDEYFVDPGEHTYDWEGVL 187

Query: 121 RRKEYLSDLLKDVDGALKNSKAKWKIVVGHHTIKSAGHHGVTKELLLRLLPILEENNVDM 180
            R  YLS LL DVD AL  SKAKWK+VVGHHTI SAGHHG T+EL   L+PILE  NVD 
Sbjct: 188 PRMSYLSQLLVDVDSALAKSKAKWKMVVGHHTINSAGHHGNTEELKQILVPILEAYNVDA 247

Query: 181 YVNGHDHCLQHI--SSNGIEFLTSGGGSKAWRGDRNWWSPEELKLYYDGQGFMSVKMTRS 238
           Y+NGHDHCL+HI   ++GI FLTSGGGSKAW GD   WS EEL+LYYDGQGFMS+++T S
Sbjct: 248 YINGHDHCLEHIIDKNSGIHFLTSGGGSKAWSGDVKPWSSEELQLYYDGQGFMSMQITES 307

Query: 239 EAVVLFYDVHGNILHKWSIPKE 260
            A ++FYDV+G  LH WSI K+
Sbjct: 308 NADIIFYDVYGKPLHSWSISKD 329

Source: Phaseolus vulgaris

Species: Phaseolus vulgaris

Genus: Phaseolus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	265
TAIR|locus:2033010	339	AT1G25230 "AT1G25230" [Arabido	0.977	0.764	0.643	2.1e-91
TAIR|locus:2006742	366	PAP3 "AT1G14700" [Arabidopsis	0.962	0.696	0.647	7.3e-91
TAIR|locus:2059748	335	PAP8 "AT2G01890" [Arabidopsis	0.977	0.773	0.628	2.5e-90
TAIR|locus:2059743	328	PAP7 "AT2G01880" [Arabidopsis	0.977	0.789	0.623	5.1e-90
TAIR|locus:2088590	338	PAP17 "AT3G17790" [Arabidopsis	1.0	0.784	0.598	2.3e-87
ZFIN|ZDB-GENE-040718-151	327	acp5b "acid phosphatase 5b, ta	0.966	0.782	0.280	3.3e-24
ZFIN|ZDB-GENE-040426-2864	339	acp5a "acid phosphatase 5a, ta	0.969	0.758	0.268	1.5e-21
MGI|MGI:87883	327	Acp5 "acid phosphatase 5, tart	0.920	0.746	0.292	4.4e-20
UNIPROTKB|E2RBY6	343	ACP5 "Uncharacterized protein"	0.916	0.708	0.274	9.2e-20
RGD|2022	327	Acp5 "acid phosphatase 5, tart	0.920	0.746	0.288	1.2e-19

TAIR|locus:2033010 AT1G25230 "AT1G25230" [Arabidopsis thaliana (taxid:3702)]

 Score = 911 (325.7 bits), Expect = 2.1e-91, P = 2.1e-91
 Identities = 168/261 (64%), Positives = 199/261 (76%)

Query:     1 MGLIGEKLEIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQKQWYNVLGNHDYR 60
             MG IGE+++I+FV+STGDN Y++G+   +DPAF  SF++IYT+PSLQK WY VLGNHDYR
Sbjct:    69 MGRIGEEMDINFVVSTGDNIYDNGMKSIDDPAFQLSFSNIYTSPSLQKPWYLVLGNHDYR 128

Query:    61 GDVEAQLSPVLTRKDSRWLCSRSFILDAEIAEFVFVDTTPFVDEYFEDPGDSTYDWRGVY 120
             GDVEAQLSP+L   DSRW+C RSFI+DAEIAE  FVDTTPFVD YF  P D TYDW GV 
Sbjct:   129 GDVEAQLSPILRSMDSRWICMRSFIVDAEIAELFFVDTTPFVDAYFLSPQDQTYDWSGVS 188

Query:   121 RRKEYLSDLLKDVDGALKNSKAKWKIVVGHHTIKSAGHHGVTKXXXXXXXXXXXXNNVDM 180
              RK YL  +L +++  L+ S AKWKIVVGHH IKSA  HG TK            N VD+
Sbjct:   189 PRKSYLQTILTELEMGLRESSAKWKIVVGHHAIKSASIHGNTKELESLLLPILEANKVDL 248

Query:   181 YVNGHDHCLQHISSNG--IEFLTSGGGSKAWRGDRNWWSPEELKLYYDGQGFMSVKMTRS 238
             Y+NGHDHCLQHIS++   I+FLTSGGGSKAWRG  NW +PE++K +YDGQGFMSVK+TRS
Sbjct:   249 YMNGHDHCLQHISTSQSPIQFLTSGGGSKAWRGYYNWTTPEDMKFFYDGQGFMSVKITRS 308

Query:   239 EAVVLFYDVHGNILHKWSIPK 259
             E  V+FYDV GN LHKW   K
Sbjct:   309 ELSVVFYDVSGNSLHKWDTSK 329

GO:0004722 "protein serine/threonine phosphatase activity" evidence=ISS

GO:0005576 "extracellular region" evidence=ISM

GO:0016787 "hydrolase activity" evidence=IEA

TAIR|locus:2006742 PAP3 "AT1G14700" [Arabidopsis thaliana (taxid:3702)]

 Score = 906 (324.0 bits), Expect = 7.3e-91, P = 7.3e-91
 Identities = 167/258 (64%), Positives = 201/258 (77%)

Query:     1 MGLIGEKLEIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQKQWYNVLGNHDYR 60
             MG IGEKL+IDFVISTGDNFY++GLT   DP F DSFT+IYTAPSLQK WY+VLGNHDYR
Sbjct:    97 MGEIGEKLDIDFVISTGDNFYDNGLTSLHDPLFQDSFTNIYTAPSLQKPWYSVLGNHDYR 156

Query:    61 GDVEAQLSPVLTRKDSRWLCSRSFILDAEIAEFVFVDTTPFVDEYFEDPGDSTYDWRGVY 120
             GDV AQLSP+L   D+RW+C RSFI++AEI +  FVDTTPFVD+YF  P    YDW GV 
Sbjct:   157 GDVRAQLSPMLRALDNRWVCMRSFIVNAEIVDLFFVDTTPFVDKYFIQPNKHVYDWSGVL 216

Query:   121 RRKEYLSDLLKDVDGALKNSKAKWKIVVGHHTIKSAGHHGVTKXXXXXXXXXXXXNNVDM 180
              R+ YL++LLK++D AL+ S AKWKIV+GHHTIKSAGHHG T             N VD+
Sbjct:   217 PRQTYLNNLLKELDVALRESVAKWKIVIGHHTIKSAGHHGNTIELEKHLLPILQANEVDL 276

Query:   181 YVNGHDHCLQHISS--NGIEFLTSGGGSKAWRG-DRNWWSPEELKLYYDGQGFMSVKMTR 237
             YVNGHDHCL+HISS  + I+F+TSGGGSKAW+G D N+  PEE++ YYDGQGFMSV ++ 
Sbjct:   277 YVNGHDHCLEHISSVDSNIQFMTSGGGSKAWKGGDVNYVEPEEMRFYYDGQGFMSVHVSE 336

Query:   238 SEAVVLFYDVHGNILHKW 255
             +E  V+FYDV G++LH W
Sbjct:   337 AELRVVFYDVFGHVLHHW 354

GO:0004722 "protein serine/threonine phosphatase activity" evidence=ISS

GO:0005576 "extracellular region" evidence=ISM

GO:0016787 "hydrolase activity" evidence=IEA

GO:0005773 "vacuole" evidence=IDA

GO:0003993 "acid phosphatase activity" evidence=ISS

TAIR|locus:2059748 PAP8 "AT2G01890" [Arabidopsis thaliana (taxid:3702)]

 Score = 901 (322.2 bits), Expect = 2.5e-90, P = 2.5e-90
 Identities = 164/261 (62%), Positives = 199/261 (76%)

Query:     1 MGLIGEKLEIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQKQWYNVLGNHDYR 60
             MG IG+ L IDF+ISTGDNFY+DG+    D  F DSFT+IYTA SLQK WYNVLGNHDYR
Sbjct:    68 MGKIGKDLNIDFLISTGDNFYDDGIISPYDSQFQDSFTNIYTATSLQKPWYNVLGNHDYR 127

Query:    61 GDVEAQLSPVLTRKDSRWLCSRSFILDAEIAEFVFVDTTPFVDEYFEDPGDSTYDWRGVY 120
             G+V AQLSP+L   D RW+C RS++++AEI +  FVDTTPFVD YF++P D  YDWRGV 
Sbjct:   128 GNVYAQLSPILRDLDCRWICLRSYVVNAEIVDIFFVDTTPFVDRYFDEPKDHVYDWRGVL 187

Query:   121 RRKEYLSDLLKDVDGALKNSKAKWKIVVGHHTIKSAGHHGVTKXXXXXXXXXXXXNNVDM 180
              R +YL+ LL DVD AL+ S AKWKIVVGHHTIKSAGHHG T             N VD+
Sbjct:   188 PRNKYLNSLLTDVDVALQESMAKWKIVVGHHTIKSAGHHGNTIELEKQLLPILEANEVDL 247

Query:   181 YVNGHDHCLQHISS--NGIEFLTSGGGSKAWRGDRNWWSPEELKLYYDGQGFMSVKMTRS 238
             Y+NGHDHCL+HISS  +GI+F+TSGGGSKAW+GD N W+P+E++ YYDGQGFMSV  + +
Sbjct:   248 YINGHDHCLEHISSINSGIQFMTSGGGSKAWKGDVNDWNPQEMRFYYDGQGFMSVYTSEA 307

Query:   239 EAVVLFYDVHGNILHKWSIPK 259
             E  V+FYD  G++LH+WS  K
Sbjct:   308 ELRVVFYDGLGHVLHRWSTLK 328

GO:0004722 "protein serine/threonine phosphatase activity" evidence=ISS

GO:0005576 "extracellular region" evidence=ISM

GO:0016787 "hydrolase activity" evidence=IEA

GO:0016311 "dephosphorylation" evidence=ISS

GO:0003993 "acid phosphatase activity" evidence=ISS

GO:0010167 "response to nitrate" evidence=RCA

GO:0015706 "nitrate transport" evidence=RCA

TAIR|locus:2059743 PAP7 "AT2G01880" [Arabidopsis thaliana (taxid:3702)]

 Score = 898 (321.2 bits), Expect = 5.1e-90, P = 5.1e-90
 Identities = 162/260 (62%), Positives = 200/260 (76%)

Query:     1 MGLIGEKLEIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQKQWYNVLGNHDYR 60
             MG++GEKL+IDFVIS GDNFY+DGL G  DP+F  SF+ IYT PSLQKQWY+VLGNHDYR
Sbjct:    64 MGVVGEKLDIDFVISVGDNFYDDGLKGVNDPSFEASFSHIYTHPSLQKQWYSVLGNHDYR 123

Query:    61 GDVEAQLSPVLTRKDSRWLCSRSFILDAEIAEFVFVDTTPFVDEYFEDPGDSTYDWRGVY 120
             G+VEAQLS VLT+KD RW C RSF+L + + +F F DT PFV++YF +P D TYDWR V 
Sbjct:   124 GNVEAQLSKVLTQKDWRWFCRRSFVLSSGMVDFFFADTNPFVEKYFTEPEDHTYDWRNVL 183

Query:   121 RRKEYLSDLLKDVDGALKNSKAKWKIVVGHHTIKSAGHHGVTKXXXXXXXXXXXXNNVDM 180
              R +Y+S+LL D+D  +K S+A WK VVGHH IK+AG+HGVT+            N VD+
Sbjct:   184 PRNKYISNLLHDLDLEIKKSRATWKFVVGHHGIKTAGNHGVTQELVDQLLPILEENKVDL 243

Query:   181 YVNGHDHCLQHISSNG-IEFLTSGGGSKAWRGDRNWWSPEELKLYYDGQGFMSVKMTRSE 239
             Y+NGHDHCLQHI S+G  +FLTSGGGSKAWRG    W P+ELKLYYDGQGFMS+ +T S+
Sbjct:   244 YINGHDHCLQHIGSHGKTQFLTSGGGSKAWRGHVQPWDPKELKLYYDGQGFMSLHITHSK 303

Query:   240 AVVLFYDVHGNILHKWSIPK 259
             A  ++YDV GN+LH+ S+ K
Sbjct:   304 AKFIYYDVSGNVLHRSSLSK 323

GO:0004722 "protein serine/threonine phosphatase activity" evidence=ISS

GO:0005576 "extracellular region" evidence=ISM

GO:0016787 "hydrolase activity" evidence=IEA

GO:0003993 "acid phosphatase activity" evidence=ISS

TAIR|locus:2088590 PAP17 "AT3G17790" [Arabidopsis thaliana (taxid:3702)]

 Score = 873 (312.4 bits), Expect = 2.3e-87, P = 2.3e-87
 Identities = 161/269 (59%), Positives = 199/269 (73%)

Query:     1 MGLIGEKLEIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQKQWYNVLGNHDYR 60
             MG IGEK+++DFV+STGDNFY++GL  E DP F  SF++IYTAPSLQKQWY+VLGNHDYR
Sbjct:    69 MGKIGEKIDLDFVVSTGDNFYDNGLFSEHDPNFEQSFSNIYTAPSLQKQWYSVLGNHDYR 128

Query:    61 GDVEAQLSPVLTRKDSRWLCSRSFILDAEIAEFVFVDTTPFVDEYFEDPGDSTYDWRGVY 120
             GD EAQLS VL   DSRW+C RSF++DAE+ E  FVDTTPFV EY+ +    +YDWR V 
Sbjct:   129 GDAEAQLSSVLREIDSRWICLRSFVVDAELVEMFFVDTTPFVKEYYTEADGHSYDWRAVP 188

Query:   121 RRKEYLSDLLKDVDGALKNSKAKWKIVVGHHTIKSAGHHGVTKXXXXXXXXXXXXNNVDM 180
              R  Y+  LL+D++ +LK+SKA+WKIVVGHH ++S GHHG TK            N VD+
Sbjct:   189 SRNSYVKALLRDLEVSLKSSKARWKIVVGHHAMRSIGHHGDTKELNEELLPILKENGVDL 248

Query:   181 YVNGHDHCLQHISSNG--IEFLTSGGGSKAWRGDRN--WWSPEELKLYYDGQGFMSVKMT 236
             Y+NGHDHCLQH+S     I+FLTSG GSKAWRGD N    +P+ LK YYDGQGFMS + T
Sbjct:   249 YMNGHDHCLQHMSDEDSPIQFLTSGAGSKAWRGDINPVTINPKLLKFYYDGQGFMSARFT 308

Query:   237 RSEAVVLFYDVHGNILHKWSIPKEPLKAA 265
              S+A ++FYDV G ILHKW   K+ L ++
Sbjct:   309 HSDAEIVFYDVFGEILHKWVTSKQLLHSS 337

GO:0004722 "protein serine/threonine phosphatase activity" evidence=ISS

GO:0005576 "extracellular region" evidence=ISM

GO:0016787 "hydrolase activity" evidence=IEA

GO:0009986 "cell surface" evidence=ISS

GO:0016791 "phosphatase activity" evidence=IDA

GO:0030643 "cellular phosphate ion homeostasis" evidence=IEP

GO:0042542 "response to hydrogen peroxide" evidence=IEP

GO:0003993 "acid phosphatase activity" evidence=ISS

GO:0016036 "cellular response to phosphate starvation" evidence=RCA

GO:0019375 "galactolipid biosynthetic process" evidence=RCA

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=RCA

ZFIN|ZDB-GENE-040718-151 acp5b "acid phosphatase 5b, tartrate resistant" [Danio rerio (taxid:7955)]

 Score = 277 (102.6 bits), Expect = 3.3e-24, P = 3.3e-24
 Identities = 76/271 (28%), Positives = 133/271 (49%)

Query:     4 IGEKLEIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQK-QWYNVLGNHDYRGD 62
             + +   +DFV+S GDNFY DG+   +D  F  S+  +++ P+L    WY + GNHD+RG+
Sbjct:    60 VAQSSGLDFVLSLGDNFYYDGVKDVDDTRFKFSYEQVFSHPALMTIPWYLIAGNHDHRGN 119

Query:    63 VEAQLSPVLTRKDSRWLCSRSFI-LDAEIAEFVFVDTTPFVDEYFEDPGDSTYDWRGVYR 121
             V AQ++   + +  RW+    +  L+ ++        T  + +     G+ TYD      
Sbjct:   120 VSAQIA--YSSRSERWIYPDLYYELNFKVPHSN-TSLTILMTDTVVVCGN-TYDGLDPVG 175

Query:   122 RKEYLS--DLLKDVDGALKNSKAKWKIVVGHHTIKSAGHHGVTKXXXXXXXXXXXXNNVD 179
              ++  +    L  ++  L+++KA + IVVGH+ I S GHHG TK             NV 
Sbjct:   176 PEDLAAANKQLAWIEQRLQSTKADFVIVVGHYPIWSIGHHGPTKCLISKLRPLLKKYNVS 235

Query:   180 MYVNGHDHCLQHI-SSNGIEFLTSGGGSKAWRG-DRNWWSPEELKLYYD-----GQGFMS 232
             +Y++GHDH LQ I   +G  F+ SG G +     D     P   +L+          F+ 
Sbjct:   236 LYLSGHDHSLQFIREDDGSSFVVSGAGVEEDSSTDHRKSFPSAWQLFSSPVNQTSGSFVY 295

Query:   233 VKMTRSEAVVLFYDVHGNILHKWSIPKEPLK 263
              ++ +SE ++ +    G  +++ S+ K  ++
Sbjct:   296 FEVNKSEMLINYLQPDGKCVYQTSVHKHKVQ 326

GO:0016787 "hydrolase activity" evidence=IEA

GO:0003993 "acid phosphatase activity" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

ZFIN|ZDB-GENE-040426-2864 acp5a "acid phosphatase 5a, tartrate resistant" [Danio rerio (taxid:7955)]

 Score = 252 (93.8 bits), Expect = 1.5e-21, P = 1.5e-21
 Identities = 72/268 (26%), Positives = 120/268 (44%)

Query:     1 MGLIGEKLEIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQKQWYNVLGNHDYR 60
             M     ++  DF+++ GDNFY  G+T   DP F ++F  +YT  SL   WY + GNHD+ 
Sbjct:    64 MAKTASQMGADFILAVGDNFYYKGVTDVNDPRFQETFEDVYTQDSLNIPWYVIAGNHDHV 123

Query:    61 GDVEAQLSPVLTRKDSRWLCSRSFI-LDAEIAEFVFVDTTPFVDEYFE-DPGDSTYDWRG 118
             G+V+AQ+    +++  RW     +  ++  I       T   +D        D   D + 
Sbjct:   124 GNVKAQIE--YSQRSKRWNFPYYYYEMNFRIPRTDSTLTIIMLDTVLLCGNSDDFLDQQP 181

Query:   119 VYRRKEYLSDL-LKDVDGALKNSKAKWKIVVGHHTIKSAGHHGVTKXXXXXXXXXXXXNN 177
                R   L++  L  +   L  SKA + +V GH+ + S   HG T               
Sbjct:   182 RAPRSGVLANRQLLWLQERLAKSKADYLLVAGHYPVWSISEHGPTDCLLKNLRPLLKKYK 241

Query:   178 VDMYVNGHDHCLQHISSNGIEFLTSGGGSKAWRGDRNWWS-PEELKLYYDGQ-----GFM 231
                Y+ GHDH LQ+I  +GI ++ SG G+      R+    P+    +++G      GF 
Sbjct:   242 ATAYLCGHDHNLQYIKESGIGYVVSGAGNFMDPDVRHRNRVPKGYLKFFNGDASTLGGFA 301

Query:   232 SVKMTRSEAVVLFYDVHGNILHKWSIPK 259
              +++ + +  V F    G  L++  + K
Sbjct:   302 HIEVDKKQMTVTFIQARGTSLYRAVLKK 329

GO:0003993 "acid phosphatase activity" evidence=IEA

GO:0016787 "hydrolase activity" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

MGI|MGI:87883 Acp5 "acid phosphatase 5, tartrate resistant" [Mus musculus (taxid:10090)]

 Score = 238 (88.8 bits), Expect = 4.4e-20, P = 4.4e-20
 Identities = 78/267 (29%), Positives = 125/267 (46%)

Query:    11 DFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQK-QWYNVLGNHDYRGDVEAQL-- 67
             DF++S GDNFY  G+    D  F ++F  +++  +L+   WY + GNHD+ G+V AQ+  
Sbjct:    66 DFIMSLGDNFYFTGVHDASDKRFQETFEDVFSDRALRNIPWYVLAGNHDHLGNVSAQIAY 125

Query:    68 SPVLTRKD--SRWLCSRSFILDAEIAEFVFV-DTTPFV---DEYFEDPGDSTYDWRGVYR 121
             S +  R +  S +   R  I    I   +F+ DT       D++         D  GV R
Sbjct:   126 SKISKRWNFPSPYYRLRFKIPRTNITVAIFMLDTVMLCGNSDDFASQQPKMPRDL-GVAR 184

Query:   122 RKEYLSDLLKDVDGALKNSKAKWKIVVGHHTIKSAGHHGVTKXXXXXXXXXXXXNNVDMY 181
              +  LS L K +  A    K  + +V GH+ I S   HG T+              V  Y
Sbjct:   185 TQ--LSWLKKQLAAA----KEDYVLVAGHYPIWSIAEHGPTRCLVKNLRPLLATYGVTAY 238

Query:   182 VNGHDHCLQHISS-NGIEFLTSGGGSKAWRGDRNWWS-PEE-LKLYYDGQ----GFMSVK 234
             + GHDH LQ++   NG+ ++ SG G+      R+    P   L+ +Y  +    GF  V+
Sbjct:   239 LCGHDHNLQYLQDENGVGYVLSGAGNFMDPSVRHQRKVPNGYLRFHYGSEDSLGGFTHVE 298

Query:   235 MTRSEAVVLFYDVHGNILHKWSIPKEP 261
             ++  E  +++ +  G  L K S+P+ P
Sbjct:   299 ISPKEMTIIYVEASGKSLFKTSLPRRP 325

GO:0003993 "acid phosphatase activity" evidence=ISO;IDA;IMP

GO:0005615 "extracellular space" evidence=ISO

GO:0005764 "lysosome" evidence=IMP;IDA

GO:0007162 "negative regulation of cell adhesion" evidence=ISO

GO:0008198 "ferrous iron binding" evidence=ISO

GO:0008199 "ferric iron binding" evidence=ISO

GO:0016311 "dephosphorylation" evidence=IDA;IMP

GO:0016787 "hydrolase activity" evidence=ISO

GO:0030335 "positive regulation of cell migration" evidence=ISO

GO:0032496 "response to lipopolysaccharide" evidence=IMP

GO:0032691 "negative regulation of interleukin-1 beta production" evidence=IMP

GO:0032695 "negative regulation of interleukin-12 production" evidence=IMP

GO:0032720 "negative regulation of tumor necrosis factor production" evidence=IMP

GO:0032929 "negative regulation of superoxide anion generation" evidence=IMP

GO:0034097 "response to cytokine stimulus" evidence=IDA

GO:0045019 "negative regulation of nitric oxide biosynthetic process" evidence=IMP

GO:0045453 "bone resorption" evidence=IMP

GO:0046872 "metal ion binding" evidence=IEA

GO:0050728 "negative regulation of inflammatory response" evidence=IMP

GO:0050830 "defense response to Gram-positive bacterium" evidence=IMP

GO:0060349 "bone morphogenesis" evidence=IMP

UNIPROTKB|E2RBY6 ACP5 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 235 (87.8 bits), Expect = 9.2e-20, P = 9.2e-20
 Identities = 74/270 (27%), Positives = 125/270 (46%)

Query:     8 LEIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQK-QWYNVLGNHDYRGDVEAQ 66
             L  DF++S GDNFY  G+    D  F ++F  +++A SL+   WY + GNHD+ G+V AQ
Sbjct:    69 LGTDFILSLGDNFYFSGVQDANDKRFRETFEDVFSASSLRNVPWYVLAGNHDHLGNVSAQ 128

Query:    67 LSPVLTRKDSRWLCSRSF------ILDAEIAEFVFV-DTTPFV---DEYFEDPGDSTYDW 116
             ++   +R   RW     +      +  + ++  +F+ DT       D++     +   D 
Sbjct:   129 IA--YSRISKRWNFPSPYYRLRFKVPRSNVSVAIFMLDTVTLCGNSDDFLSQQPERPRDL 186

Query:   117 RGVYRRKEYLSDLLKDVDGALKNSKAKWKIVVGHHTIKSAGHHGVTKXXXXXXXXXXXXN 176
              G+ R +  LS L K +  A    K  + +V GH+ + S   HG T              
Sbjct:   187 -GLARTQ--LSWLKKQLAAA----KEDYVLVAGHYPVWSIAEHGPTHCLVKQLMPLLATY 239

Query:   177 NVDMYVNGHDHCLQHISS-NGIEFLTSGGGSKAWRGDRNWWS-PEE-LKLYYDGQ----G 229
              V  Y+ GHDH LQ++   NG+ ++ SG G+      ++    P   L+ +Y  +    G
Sbjct:   240 KVTAYLCGHDHNLQYLQDENGVGYVLSGAGNFMDPSKKHLRKVPNGYLRFHYGAEDSLGG 299

Query:   230 FMSVKMTRSEAVVLFYDVHGNILHKWSIPK 259
             F  V+++  E  V + +  G  L K  +P+
Sbjct:   300 FAYVEISPKEMSVTYIEASGKSLFKTRLPR 329

GO:0060349 "bone morphogenesis" evidence=IEA

GO:0050830 "defense response to Gram-positive bacterium" evidence=IEA

GO:0050728 "negative regulation of inflammatory response" evidence=IEA

GO:0045453 "bone resorption" evidence=IEA

GO:0045019 "negative regulation of nitric oxide biosynthetic process" evidence=IEA

GO:0034097 "response to cytokine stimulus" evidence=IEA

GO:0032929 "negative regulation of superoxide anion generation" evidence=IEA

GO:0032720 "negative regulation of tumor necrosis factor production" evidence=IEA

GO:0032695 "negative regulation of interleukin-12 production" evidence=IEA

GO:0032691 "negative regulation of interleukin-1 beta production" evidence=IEA

GO:0032496 "response to lipopolysaccharide" evidence=IEA

GO:0008199 "ferric iron binding" evidence=IEA

GO:0008198 "ferrous iron binding" evidence=IEA

GO:0003993 "acid phosphatase activity" evidence=IEA

RGD|2022 Acp5 "acid phosphatase 5, tartrate resistant" [Rattus norvegicus (taxid:10116)]

 Score = 234 (87.4 bits), Expect = 1.2e-19, P = 1.2e-19
 Identities = 77/267 (28%), Positives = 125/267 (46%)

Query:    11 DFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQK-QWYNVLGNHDYRGDVEAQL-- 67
             DF++S GDNFY  G+    D  F ++F  +++  +L+   WY + GNHD+ G+V AQ+  
Sbjct:    66 DFIMSLGDNFYFTGVHDANDKRFQETFEDVFSDRALRNIPWYVLAGNHDHLGNVSAQIAY 125

Query:    68 SPVLTRKD--SRWLCSRSFILDAEIAEFVFV-DTTPFV---DEYFEDPGDSTYDWRGVYR 121
             S +  R +  S +   R  +  + I   +F+ DT       D++     +   D  GV R
Sbjct:   126 SKISKRWNFPSPYYRLRFKVPRSNITVAIFMLDTVMLCGNSDDFVSQQPEMPRDL-GVAR 184

Query:   122 RKEYLSDLLKDVDGALKNSKAKWKIVVGHHTIKSAGHHGVTKXXXXXXXXXXXXNNVDMY 181
              +  LS L K +  A    K  + +V GH+ I S   HG T+              V  Y
Sbjct:   185 TQ--LSWLKKQLAAA----KEDYVLVAGHYPIWSIAEHGPTRCLVKNLRPLLAAYGVTAY 238

Query:   182 VNGHDHCLQHISS-NGIEFLTSGGGSKAWRGDRNWWS-PEE-LKLYYDGQ----GFMSVK 234
             + GHDH LQ++   NG+ ++ SG G+      R+    P   L+ +Y  +    GF  V+
Sbjct:   239 LCGHDHNLQYLQDENGVGYVLSGAGNFMDPSVRHQRKVPNGYLRFHYGSEDSLGGFTYVE 298

Query:   235 MTRSEAVVLFYDVHGNILHKWSIPKEP 261
             +   E  + + +  G  L K S+P+ P
Sbjct:   299 IGSKEMSITYVEASGKSLFKTSLPRRP 325

GO:0001503 "ossification" evidence=IEP

GO:0003993 "acid phosphatase activity" evidence=ISO;IDA;TAS

GO:0005615 "extracellular space" evidence=IDA

GO:0005764 "lysosome" evidence=ISO;TAS

GO:0007162 "negative regulation of cell adhesion" evidence=IDA

GO:0008198 "ferrous iron binding" evidence=ISO;ISS

GO:0008199 "ferric iron binding" evidence=ISO;ISS

GO:0010043 "response to zinc ion" evidence=IEP

GO:0014070 "response to organic cyclic compound" evidence=IEP

GO:0016021 "integral to membrane" evidence=TAS

GO:0016311 "dephosphorylation" evidence=ISO

GO:0016787 "hydrolase activity" evidence=IDA

GO:0030316 "osteoclast differentiation" evidence=IEP

GO:0030335 "positive regulation of cell migration" evidence=IMP

GO:0032496 "response to lipopolysaccharide" evidence=ISO

GO:0032691 "negative regulation of interleukin-1 beta production" evidence=ISO

GO:0032695 "negative regulation of interleukin-12 production" evidence=ISO

GO:0032720 "negative regulation of tumor necrosis factor production" evidence=ISO

GO:0032929 "negative regulation of superoxide anion generation" evidence=ISO

GO:0033555 "multicellular organismal response to stress" evidence=IEP

GO:0033591 "response to L-ascorbic acid" evidence=IEP

GO:0034097 "response to cytokine stimulus" evidence=ISO

GO:0045019 "negative regulation of nitric oxide biosynthetic process" evidence=ISO

GO:0045453 "bone resorption" evidence=IEP;ISO;TAS

GO:0050728 "negative regulation of inflammatory response" evidence=ISO

GO:0050830 "defense response to Gram-positive bacterium" evidence=ISO

GO:0060349 "bone morphogenesis" evidence=ISO

GO:0070723 "response to cholesterol" evidence=IEP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q8VYU7	PPA4_ARATH	3, ., 1, ., 3, ., 2	0.6743	0.9773	0.7640	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	3.1.3	0.963
3rd Layer	3.1.3.2	0.946

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	265
cd07378	277	cd07378, MPP_ACP5, Homo sapiens acid phosphatase 5	4e-80
PTZ00422	394	PTZ00422, PTZ00422, glideosome-associated protein	7e-14
pfam00149	185	pfam00149, Metallophos, Calcineurin-like phosphoes	1e-11
COG1409	301	COG1409, Icc, Predicted phosphohydrolases [General	3e-05
cd07401	256	cd07401, MPP_TMEM62_N, Homo sapiens TMEM62, N-term	8e-05
cd00838	131	cd00838, MPP_superfamily, metallophosphatase super	8e-04
cd00839	294	cd00839, MPP_PAPs, purple acid phosphatases of the	8e-04

>gnl|CDD|163621 cd07378, MPP_ACP5, Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain

 Score =  242 bits (619), Expect = 4e-80
 Identities = 97/260 (37%), Positives = 129/260 (49%), Gaps = 17/260 (6%)

Query: 1   MGLIGEKLEIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQKQWYNVLGNHDYR 60
           M  +  +L  DF++S GDNFY+DG+   +DP F  +F  +Y+APSLQ  WY VLGNHDY 
Sbjct: 24  MAKVAAELGPDFILSLGDNFYDDGVGSVDDPRFETTFEDVYSAPSLQVPWYLVLGNHDYS 83

Query: 61  GDVEAQLSPVLTRKDSRWLC-------SRSFILDAEIAEFVFVDTTPFVDEYFEDPGDST 113
           G+V AQ+         RW         S  F       EF+ +DT P             
Sbjct: 84  GNVSAQIDYTKRPNSPRWTMPAYYYRVSFPFPSSDTTVEFIMIDTVPLCGNSD------D 137

Query: 114 YDWRGVYRRKEYLSDLLKDVDGALKNSKAKWKIVVGHHTIKSAGHHGVTKELLLRLLPIL 173
                     +   + L  ++  L  S A WKIVVGHH I S+G HG T  L+ RLLP+L
Sbjct: 138 IASPYGPPNGKLAEEQLAWLEKTLAASTADWKIVVGHHPIYSSGEHGPTSCLVDRLLPLL 197

Query: 174 EENNVDMYVNGHDHCLQHISSN--GIEFLTSGGGSKAWRGD--RNWWSPEELKLYYDGQG 229
           ++  VD Y++GHDH LQHI  +  G  F+ SG GSKA       +            G G
Sbjct: 198 KKYKVDAYLSGHDHNLQHIKDDGSGTSFVVSGAGSKARPSVKHIDKVPQFFSGFTSSGGG 257

Query: 230 FMSVKMTRSEAVVLFYDVHG 249
           F  +++T+ E  V FYD  G
Sbjct: 258 FAYLELTKEELTVRFYDADG 277

Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 277

>gnl|CDD|185607 PTZ00422, PTZ00422, glideosome-associated protein 50; Provisional

 Score = 70.2 bits (172), Expect = 7e-14
 Identities = 70/297 (23%), Positives = 118/297 (39%), Gaps = 59/297 (19%)

Query: 6   EKLEIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYT--APSLQKQWYNVLGNHDYRGDV 63
           +   + F++S G NF   G+ G  DP +   F ++Y+  +  +Q  ++ VLG  D+ G+ 
Sbjct: 54  KNERVTFLVSPGSNF-PGGVDGLNDPKWKHCFENVYSEESGDMQIPFFTVLGQADWDGNY 112

Query: 64  EAQL-----------SPVLTRKDS------RWL---------------CSRSFIL----D 87
            A+L                  DS      +W+                  S +     D
Sbjct: 113 NAELLKGQNVYLNGHGQTDIEYDSNNDIYPKWIMPNYWYHYFTHFTDTSGPSLLKSGHKD 172

Query: 88  AEIAEFVFVDTTPFV-DEYFEDPGDSTYDWRGVYRRKEYLSDLLKDVDGALKNSKAKWKI 146
             +A F+F+DT  ++    F     S   W           DL   ++ A K   A + I
Sbjct: 173 MSVA-FIFIDT--WILSSSFPYKKVSERAW----------QDLKATLEYAPKI--ADYII 217

Query: 147 VVGHHTIKSAGHHGVTKELLLRLLPILEENNVDMYVNGHDHCLQHISSNGIEFLTSGGGS 206
           VVG   I S+G       L   LLP+L++  VD+Y++G+D  ++ ++  G   +  G G 
Sbjct: 218 VVGDKPIYSSGSSKGDSYLSYYLLPLLKDAQVDLYISGYDRNMEVLTDEGTAHINCGSGG 277

Query: 207 KAWRGDRNWWSPEELKLYYDGQGFMSVKMTRSEAVVLFYDVHGNILHKWSIPKEPLK 263
            +  G ++     +   Y +  GF   ++     V  F  V GN        K+PLK
Sbjct: 278 NS--GRKSIMKNSKSLFYSEDIGFCIHELNAEGMVTKF--VSGNTGEVLYTHKQPLK 330

Length = 394

>gnl|CDD|215750 pfam00149, Metallophos, Calcineurin-like phosphoesterase

 Score = 61.7 bits (149), Expect = 1e-11
 Identities = 33/187 (17%), Positives = 55/187 (29%), Gaps = 28/187 (14%)

Query: 4   IGEKLEIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQKQWYNVLGNHDYRGDV 63
           +  + + D V+  GD       + E                      Y V GNHD+    
Sbjct: 24  LLGEPKPDLVLFLGDLVDRGPPSLEVLALLF------ALKLKAPGPVYLVRGNHDFDSGN 77

Query: 64  EAQLSPVLTRKDSRWLCSRSFILDAEIAEFVFVDTTPFVDEYFEDPGDSTYDWRGVYRRK 123
                 +        L +                     +   E  G S+   +G     
Sbjct: 78  SELGFYLECAGLPYVLGNGDV-----------------SNGTVEIIGLSSLYGKGGGLVW 120

Query: 124 EYLSDLLKDVDGALKNSKAKWKIVVGHHTIKSAGHHGVTKELLLR--LLPILEENNVDMY 181
           E   +LL      L  +    KI++ H  +  +   G    L     L  +L++N VD+ 
Sbjct: 121 EEFLELLDL---LLLAALVDGKILLVHGPLSPSLDSGDDIYLFGEEALEDLLKDNGVDLV 177

Query: 182 VNGHDHC 188
           + GH H 
Sbjct: 178 LRGHTHV 184

This family includes a diverse range of phosphoesterases, including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases as well as nucleases such as bacterial SbcD or yeast MRE11. The most conserved regions in this superfamily centre around the metal chelating residues. Length = 185

>gnl|CDD|224327 COG1409, Icc, Predicted phosphohydrolases [General function prediction only]

 Score = 44.2 bits (104), Expect = 3e-05
 Identities = 37/186 (19%), Positives = 60/186 (32%), Gaps = 28/186 (15%)

Query: 6   EKLEIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQKQWYNVLGNHDYRGDVEA 65
           E+L+ D ++ TGD    DG   E     L    +      L      V GNHD R     
Sbjct: 30  EQLKPDLLVVTGD-LTNDGEPEE--YRRLKELLA---RLELPAPVIVVPGNHDARVVNGE 83

Query: 66  QLSPVLTRKDSRWLCSRSFILDAEIAEFVFVDTTPFVDEYFEDPGDSTYDWRGVYRRKEY 125
             S     + +  + + S          + +D++          G    DW         
Sbjct: 84  AFSDQFFNRYAVLVGACSS----GGWRVIGLDSSVPGVPLGRL-GAEQLDW--------- 129

Query: 126 LSDLLKDVDGALKNSKAKWKIVVGHHTIKS----AGHHGVTKELLLRLLPILEENNVDMY 181
           L + L       K       +V+ HH + S         +     L  + I   N+V + 
Sbjct: 130 LEEALAAAPERAK----DTVVVLHHHPLPSPGTGVDRVALRDAGELLDVLIAHGNDVRLV 185

Query: 182 VNGHDH 187
           ++GH H
Sbjct: 186 LSGHIH 191

Length = 301

>gnl|CDD|163644 cd07401, MPP_TMEM62_N, Homo sapiens TMEM62, N-terminal metallophosphatase domain

 Score = 42.7 bits (101), Expect = 8e-05
 Identities = 49/222 (22%), Positives = 82/222 (36%), Gaps = 44/222 (19%)

Query: 4   IGEKLEIDFVISTGD---NFYEDGLTGEEDPAFLDSFTSIYTAPSL--QKQWYNVLGNHD 58
             + ++   V++TGD   N   + L   +       + +I    S+  +++W+++ GNHD
Sbjct: 28  FIDVIKPALVLATGDLTDNKTGNKLPSYQYQEEWQKYYNILKESSVINKEKWFDIRGNHD 87

Query: 59  YRGDVEAQLSPVLTRKDSRWLCSRSFILDAEIAEFVFVDTTPF-------VDEYFEDPGD 111
                         RK S      SF          F  TT F       VD     PG 
Sbjct: 88  LFNIPSLDSENNYYRKYSATGRDGSFS---------FSHTTRFGNYSFIGVDP-TLFPGP 137

Query: 112 -STYDWRGVYRRKEYLSDLLKDVDGALKNSKAKWKIVVGHHTIK-----SAGHHGVTKEL 165
              +++ G    K+ L  L K+     K++ + + I  GH+        SA      K+L
Sbjct: 138 KRPFNFFGSLD-KKLLDRLEKE---LEKSTNSNYTIWFGHYPTSTIISPSAKSSSKFKDL 193

Query: 166 LLRLLPILEENNVDMYVNGHDHCLQ-----HISSNGIEFLTS 202
           L        + NV  Y+ GH H L      H + +    +T+
Sbjct: 194 LK-------KYNVTAYLCGHLHPLGGLEPVHYAGHPYALITN 228

TMEM62 (transmembrane protein 62) is an uncharacterized Homo sapiens transmembrane protein with an N-terminal metallophosphatase domain. TMEM62 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 256

>gnl|CDD|163614 cd00838, MPP_superfamily, metallophosphatase superfamily, metallophosphatase domain

 Score = 38.4 bits (89), Expect = 8e-04
 Identities = 14/62 (22%), Positives = 24/62 (38%), Gaps = 4/62 (6%)

Query: 146 IVVGHHTIKSAGHHGVTKELLLR--LLPILEENNVDMYVNGHDHCLQH--ISSNGIEFLT 201
           I++ H             E      LL +LE+  VD+ ++GH H  +       G  ++ 
Sbjct: 70  ILLTHGPPYDPLDELSPDEDPGSEALLELLEKYGVDLVLSGHTHVYERREPDGGGTLYIN 129

Query: 202 SG 203
            G
Sbjct: 130 PG 131

Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 131

>gnl|CDD|163615 cd00839, MPP_PAPs, purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain

 Score = 39.6 bits (93), Expect = 8e-04
 Identities = 46/201 (22%), Positives = 68/201 (33%), Gaps = 40/201 (19%)

Query: 3   LIGEKLEIDFVISTGDNFYEDG-LTGEEDPAFLDSFTSIYTAPSLQKQWYNVLGNHDY-- 59
           L  E    D ++  GD  Y DG   G     F+     + +       +    GNH+   
Sbjct: 27  LEKELGNYDAILHVGDLAYADGYNNGSRWDTFMRQIEPLAS----YVPYMVTPGNHEADY 82

Query: 60  -RGDVEAQLSPVLTR--------KDSRWLCSRSFILDAEIAEFVFVDTTPFVDEYFEDPG 110
                + +      R          + W    SF  D     FV + T   VD Y + PG
Sbjct: 83  NFSFYKIKAFFPRFRFPHSPSGSTSNLWY---SF--DVGPVHFVSLST--EVDFYGDGPG 135

Query: 111 DSTYDWRGVYRRKEYLSDLLKDVDGALKNSKAKWKIVVGHHTI----KSAGHHGVTKELL 166
              YDW         L   L  VD     SK  W IV+GH  +             +++ 
Sbjct: 136 SPQYDW---------LEADLAKVD----RSKTPWIIVMGHRPMYCSNTDHDDCIEGEKMR 182

Query: 167 LRLLPILEENNVDMYVNGHDH 187
             L  +  +  VD+ ++GH H
Sbjct: 183 AALEDLFYKYGVDLVLSGHVH 203

Purple acid phosphatases (PAPs) belong to a diverse family of binuclear metallohydrolases that have been identified and characterized in plants, animals, and fungi. PAPs contain a binuclear metal center and their characteristic pink or purple color derives from a charge-transfer transition between a tyrosine residue and a chromophoric ferric ion within the binuclear center. PAPs catalyze the hydrolysis of a wide range of activated phosphoric acid mono- and di-esters and anhydrides. PAPs are distinguished from the other phosphatases by their insensitivity to L-(+) tartrate inhibition and are therefore also known as tartrate resistant acid phosphatases (TRAPs). While only a few copies of PAP-like genes are present in mammalian and fungal genomes, multiple copies are present in plant genomes. PAPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 294

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	265
KOG2679	336	consensus Purple (tartrate-resistant) acid phospha	100.0
PTZ00422	394	glideosome-associated protein 50; Provisional	100.0
cd07378	277	MPP_ACP5 Homo sapiens acid phosphatase 5 and relat	100.0
cd00839	294	MPP_PAPs purple acid phosphatases of the metalloph	100.0
PLN02533	427	probable purple acid phosphatase	99.97
cd07395	262	MPP_CSTP1 Homo sapiens CSTP1 and related proteins,	99.96
KOG1378	452	consensus Purple acid phosphatase [Carbohydrate tr	99.93
PRK11148	275	cyclic 3',5'-adenosine monophosphate phosphodieste	99.93
cd07402	240	MPP_GpdQ Enterobacter aerogenes GpdQ and related p	99.93
cd07396	267	MPP_Nbla03831 Homo sapiens Nbla03831 and related p	99.92
cd07401	256	MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metal	99.88
cd07399	214	MPP_YvnB Bacillus subtilis YvnB and related protei	99.84
cd08163	257	MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related	99.81
cd00842	296	MPP_ASMase acid sphingomyelinase and related prote	99.8
TIGR03729	239	acc_ester putative phosphoesterase. Members of thi	99.77
cd07393	232	MPP_DR1119 Deinococcus radiodurans DR1119 and rela	99.77
TIGR03767	496	P_acnes_RR metallophosphoesterase, PPA1498 family.	99.77
cd07392	188	MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and rel	99.74
PF09423	453	PhoD: PhoD-like phosphatase; InterPro: IPR018946 T	99.71
cd07383	199	MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase	99.71
cd07388	224	MPP_Tt1561 Thermus thermophilus Tt1561 and related	99.65
COG3540	522	PhoD Phosphodiesterase/alkaline phosphatase D [Ino	99.62
PF00149	200	Metallophos: Calcineurin-like phosphoesterase; Int	99.62
COG1409	301	Icc Predicted phosphohydrolases [General function	99.61
KOG1432	379	consensus Predicted DNA repair exonuclease SIA1 [G	99.61
cd07404	166	MPP_MS158 Microscilla MS158 and related proteins,	99.58
cd00840	223	MPP_Mre11_N Mre11 nuclease, N-terminal metallophos	99.55
TIGR03768	492	RPA4764 metallophosphoesterase, RPA4764 family. Th	99.54
cd07400	144	MPP_YydB Bacillus subtilis YydB and related protei	99.53
cd07385	223	MPP_YkuE_C Bacillus subtilis YkuE and related prot	99.48
PRK11340	271	phosphodiesterase YaeI; Provisional	99.36
cd07394	178	MPP_Vps29 Homo sapiens Vps29 and related proteins,	99.3
cd08166	195	MPP_Cdc1_like_1 uncharacterized subgroup related t	99.27
cd07397	238	MPP_DevT Myxococcus xanthus DevT and related prote	99.27
PF12850	156	Metallophos_2: Calcineurin-like phosphoesterase su	99.27
PF14582	255	Metallophos_3: Metallophosphoesterase, calcineurin	99.26
COG1768	230	Predicted phosphohydrolase [General function predi	99.25
cd08165	156	MPP_MPPE1 human MPPE1 and related proteins, metall	99.25
cd07384	171	MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and re	99.24
cd00841	155	MPP_YfcE Escherichia coli YfcE and related protein	99.23
cd00838	131	MPP_superfamily metallophosphatase superfamily, me	99.23
TIGR00583	405	mre11 DNA repair protein (mre11). All proteins in	99.2
cd07379	135	MPP_239FB Homo sapiens 239FB and related proteins,	99.14
TIGR00040	158	yfcE phosphoesterase, MJ0936 family. Members of th	99.13
PHA02546	340	47 endonuclease subunit; Provisional	99.1
cd07403	129	MPP_TTHA0053 Thermus thermophilus TTHA0053 and rel	99.06
COG2129	226	Predicted phosphoesterases, related to the Icc pro	99.05
cd08164	193	MPP_Ted1 Saccharomyces cerevisiae Ted1 and related	99.04
PRK09453	182	phosphodiesterase; Provisional	99.03
cd07389	228	MPP_PhoD Bacillus subtilis PhoD and related protei	98.93
TIGR01854	231	lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase.	98.93
COG1408	284	Predicted phosphohydrolases [General function pred	98.9
COG0420	390	SbcD DNA repair exonuclease [DNA replication, reco	98.87
COG0622	172	Predicted phosphoesterase [General function predic	98.86
PRK10966	407	exonuclease subunit SbcD; Provisional	98.86
PRK05340	241	UDP-2,3-diacylglucosamine hydrolase; Provisional	98.86
cd07398	217	MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and relat	98.79
cd07410	277	MPP_CpdB_N Escherichia coli CpdB and related prote	98.74
cd07406	257	MPP_CG11883_N Drosophila melanogaster CG11883 and	98.71
cd00844	262	MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-t	98.66
TIGR00619	253	sbcd exonuclease SbcD. This family is based on the	98.55
KOG3770	577	consensus Acid sphingomyelinase and PHM5 phosphate	98.49
COG2908	237	Uncharacterized protein conserved in bacteria [Fun	98.45
cd07411	264	MPP_SoxB_N Thermus thermophilus SoxB and related p	98.37
cd00845	252	MPP_UshA_N_like Escherichia coli UshA-like family,	98.3
cd07408	257	MPP_SA0022_N Staphylococcus aureus SA0022 and rela	98.25
KOG3662	410	consensus Cell division control protein/predicted	98.24
cd07412	288	MPP_YhcR_N Bacillus subtilis YhcR endonuclease and	98.23
cd07386	243	MPP_DNA_pol_II_small_archeal_C archeal DNA polymer	98.03
KOG2310	646	consensus DNA repair exonuclease MRE11 [Replicatio	97.99
cd07407	282	MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and	97.97
KOG3325	183	consensus Membrane coat complex Retromer, subunit	97.94
PRK04036	504	DNA polymerase II small subunit; Validated	97.92
KOG2863	456	consensus RNA lariat debranching enzyme [RNA proce	97.91
cd07391	172	MPP_PF1019 Pyrococcus furiosus PF1019 and related	97.88
cd07405	285	MPP_UshA_N Escherichia coli UshA and related prote	97.87
cd07424	207	MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase do	97.8
PRK09419	1163	bifunctional 2',3'-cyclic nucleotide 2'-phosphodie	97.68
TIGR00282	266	metallophosphoesterase, MG_246/BB_0505 family. A m	97.66
PRK09558	551	ushA bifunctional UDP-sugar hydrolase/5'-nucleotid	97.65
COG5555	392	Cytolysin, a secreted calcineurin-like phosphatase	97.65
cd07409	281	MPP_CD73_N CD73 ecto-5'-nucleotidase and related p	97.62
cd07382	255	MPP_DR1281 Deinococcus radiodurans DR1281 and rela	97.49
TIGR00024	225	SbcD_rel_arch putative phosphoesterase, SbcD/Mre11	97.37
COG0737	517	UshA 5'-nucleotidase/2',3'-cyclic phosphodiesteras	97.33
PRK09419	1163	bifunctional 2',3'-cyclic nucleotide 2'-phosphodie	97.29
cd07380	150	MPP_CWF19_N Schizosaccharomyces pombe CWF19 and re	97.26
PRK09418	780	bifunctional 2',3'-cyclic nucleotide 2'-phosphodie	97.26
PF14008	62	Metallophos_C: Iron/zinc purple acid phosphatase-l	97.18
PRK11907	814	bifunctional 2',3'-cyclic nucleotide 2'-phosphodie	97.08
COG1311	481	HYS2 Archaeal DNA polymerase II, small subunit/DNA	96.99
COG4186	186	Predicted phosphoesterase or phosphohydrolase [Gen	96.97
TIGR01530	550	nadN NAD pyrophosphatase/5'-nucleotidase NadN. Thi	96.96
COG1407	235	Predicted ICC-like phosphoesterases [General funct	96.95
TIGR01390	626	CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphod	96.93
cd08162	313	MPP_PhoA_N Synechococcus sp. strain PCC 7942 PhoA	96.85
cd07390	168	MPP_AQ1575 Aquifex aeolicus AQ1575 and related pro	96.84
PHA02239	235	putative protein phosphatase	96.67
PRK00166	275	apaH diadenosine tetraphosphatase; Reviewed	96.39
KOG4419	602	consensus 5' nucleotidase [Nucleotide transport an	96.39
cd07422	257	MPP_ApaH Escherichia coli ApaH and related protein	96.23
cd07425	208	MPP_Shelphs Shewanella-like phosphatases, metallop	95.92
PRK09420	649	cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosp	95.79
cd00144	225	MPP_PPP_family phosphoprotein phosphatases of the	95.76
cd07387	257	MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2	95.73
cd07413	222	MPP_PA3087 Pseudomonas aeruginosa PA3087 and relat	95.53
PF13277	253	YmdB: YmdB-like protein; PDB: 2CV9_B 2Z06_C.	95.3
PRK11439	218	pphA serine/threonine protein phosphatase 1; Provi	94.82
PRK09968	218	serine/threonine-specific protein phosphatase 2; P	94.72
cd07421	304	MPP_Rhilphs Rhilph phosphatases, metallophosphatas	94.55
PRK13625	245	bis(5'-nucleosyl)-tetraphosphatase PrpE; Provision	94.54
TIGR00668	279	apaH bis(5'-nucleosyl)-tetraphosphatase (symmetric	94.46
cd07423	234	MPP_PrpE Bacillus subtilis PrpE and related protei	94.38
PF09587	250	PGA_cap: Bacterial capsule synthesis protein PGA_c	93.73
COG1692	266	Calcineurin-like phosphoesterase [General function	93.27
smart00854	239	PGA_cap Bacterial capsule synthesis protein PGA_ca	92.41
cd07381	239	MPP_CapA CapA and related proteins, metallophospha	92.37
KOG3947	305	consensus Phosphoesterases [General function predi	91.69
cd07420	321	MPP_RdgC Drosophila melanogaster RdgC and related	88.87
cd07416	305	MPP_PP2B PP2B, metallophosphatase domain. PP2B (ca	87.68
smart00156	271	PP2Ac Protein phosphatase 2A homologues, catalytic	87.41
cd07415	285	MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein	86.0
cd07390	168	MPP_AQ1575 Aquifex aeolicus AQ1575 and related pro	85.74
cd07419	311	MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase a	85.65
cd07417	316	MPP_PP5_C PP5, C-terminal metallophosphatase domai	85.23
PTZ00480	320	serine/threonine-protein phosphatase; Provisional	84.87
cd07418	377	MPP_PP7 PP7, metallophosphatase domain. PP7 is a p	84.8
PTZ00244	294	serine/threonine-protein phosphatase PP1; Provisio	84.17
cd07414	293	MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzyme	83.59
PTZ00239	303	serine/threonine protein phosphatase 2A; Provision	82.86
PF04042	209	DNA_pol_E_B: DNA polymerase alpha/epsilon subunit	81.82
PRK09968	218	serine/threonine-specific protein phosphatase 2; P	80.72
COG1168	388	MalY Bifunctional PLP-dependent enzyme with beta-c	80.17

>KOG2679 consensus Purple (tartrate-resistant) acid phosphatase [Posttranslational modification, protein turnover, chaperones]

Probab=100.00  E-value=1.3e-51  Score=320.63  Aligned_cols=263  Identities=70%  Similarity=1.171  Sum_probs=243.1

Q ss_pred             CcccccccCCCEEEecCCccCCCCCCCCCChhhhhhcccccCCCCCCCceEEcCCCcccCCCccccccccccccCCCcee
Q 024595            1 MGLIGEKLEIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQKQWYNVLGNHDYRGDVEAQLSPVLTRKDSRWLC   80 (265)
Q Consensus         1 ~~~~~~~~~pd~vv~~GD~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~p~~~i~GNHD~~~~~~~~~~~~~~~~~~~~~~   80 (265)
                      |++++++++.||||-+||++|++|+.++.|+++.+.|+.++..++|+.|||.|.||||++++..+++.+.+++.+.||.+
T Consensus        67 mg~ige~l~idfvlS~GDNfYd~G~~~~~Dp~Fq~sF~nIYT~pSLQkpWy~vlGNHDyrGnV~AQls~~l~~~d~RW~c  146 (336)
T KOG2679|consen   67 MGEIGEKLDIDFVLSTGDNFYDTGLTSENDPRFQDSFENIYTAPSLQKPWYSVLGNHDYRGNVEAQLSPVLRKIDKRWIC  146 (336)
T ss_pred             HHhHHHhccceEEEecCCcccccCCCCCCChhHHhhhhhcccCcccccchhhhccCccccCchhhhhhHHHHhhccceec
Confidence            57788899999999999999999999999999999999999999999999999999999999999999889999999999


Q ss_pred             eeeeEecCceEEEEEEeCccccccccCCCCCCCCCccccchhhhhHHHHHHHHHHHhhcCCCCeEEEEeccccccCCCCC
Q 024595           81 SRSFILDAEIAEFVFVDTTPFVDEYFEDPGDSTYDWRGVYRRKEYLSDLLKDVDGALKNSKAKWKIVVGHHTIKSAGHHG  160 (265)
Q Consensus        81 ~~~y~~~~~~~~~i~lds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~~wl~~~l~~~~~~~~iv~~H~P~~~~~~~~  160 (265)
                      ++.|+.....+.++++|+..+...+........++|.+..|+..+...++.||+..|+++.++|+||+.|||+.+.+.||
T Consensus       147 ~rsf~~~ae~ve~f~v~~~~f~~d~~~~~~~~~ydw~~v~PR~~~~~~~l~~le~~L~~S~a~wkiVvGHh~i~S~~~HG  226 (336)
T KOG2679|consen  147 PRSFYVDAEIVEMFFVDTTPFMDDTFTLCTDDVYDWRGVLPRVKYLRALLSWLEVALKASRAKWKIVVGHHPIKSAGHHG  226 (336)
T ss_pred             ccHHhhcceeeeeeccccccchhhheecccccccccccCChHHHHHHHHHHHHHHHHHHhhcceEEEecccceehhhccC
Confidence            99998887778999999999887766555455688888888888899999999999999999999999999999999999


Q ss_pred             ChHHHHHHHHHHHHhCCccEEEeCCcccceEEee--CCeEEEEeCCCCCCCCC-CCC-CCCCccceeeecCCCeEEEEEe
Q 024595          161 VTKELLLRLLPILEENNVDMYVNGHDHCLQHISS--NGIEFLTSGGGSKAWRG-DRN-WWSPEELKLYYDGQGFMSVKMT  236 (265)
Q Consensus       161 ~~~~~~~~l~~~~~~~~v~~vl~GH~H~~~~~~~--~~~~~i~~g~~~~~~~~-~~~-~~~~~~~~~~~~~~gy~~~~v~  236 (265)
                      .+.+++++|+++|+.++|+++++||+|+.++...  .+|.|+++|+|++.|++ ..+ ++++...+|.++..||+.++++
T Consensus       227 ~T~eL~~~LlPiL~~n~VdlY~nGHDHcLQhis~~e~~iqf~tSGagSkaw~g~~~~~~~~p~~lkF~YdgqGfmsv~is  306 (336)
T KOG2679|consen  227 PTKELEKQLLPILEANGVDLYINGHDHCLQHISSPESGIQFVTSGAGSKAWRGTDHNPEVNPKELKFYYDGQGFMSVEIS  306 (336)
T ss_pred             ChHHHHHHHHHHHHhcCCcEEEecchhhhhhccCCCCCeeEEeeCCcccccCCCccCCccChhheEEeeCCCceEEEEEe
Confidence            9999999999999999999999999999998866  78999999999999987 554 4678889999999999999999


Q ss_pred             CCeEEEEEEecCCCeEEEEEccCCCcc
Q 024595          237 RSEAVVLFYDVHGNILHKWSIPKEPLK  263 (265)
Q Consensus       237 ~~~i~~~~~~~~g~~~~~~~i~~~~~~  263 (265)
                      ..++++.||+..|+.++.|...+|...
T Consensus       307 ~~e~~vvfyD~~G~~Lhk~~t~kr~~~  333 (336)
T KOG2679|consen  307 HSEARVVFYDVSGKVLHKWSTSKRSLY  333 (336)
T ss_pred             cceeEEEEEeccCceEEEeeccccccc
Confidence            999999999999999999998888654

>PTZ00422 glideosome-associated protein 50; Provisional

Probab=100.00  E-value=4.9e-43  Score=294.40  Aligned_cols=244  Identities=23%  Similarity=0.454  Sum_probs=200.6

Q ss_pred             CcccccccCCCEEEecCCccCCCCCCCCCChhhhhhcccccCCCC--CCCceEEcCCCcccCCCcccccccccc------
Q 024595            1 MGLIGEKLEIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPS--LQKQWYNVLGNHDYRGDVEAQLSPVLT------   72 (265)
Q Consensus         1 ~~~~~~~~~pd~vv~~GD~~~~~g~~~~~~~~~~~~~~~~~~~~~--l~~p~~~i~GNHD~~~~~~~~~~~~~~------   72 (265)
                      |++.+++.++||||.+||++ .+|+.+.+|++|...|+.++..++  +++||++++||||+.++..+++.+...      
T Consensus        49 M~~~~~~~~~~FVls~GDNF-~~Gv~sv~Dp~f~~~FE~vY~~~s~~L~~Pwy~vLGNHDy~Gn~~AQi~r~~~~y~~~~  127 (394)
T PTZ00422         49 LKQYAKNERVTFLVSPGSNF-PGGVDGLNDPKWKHCFENVYSEESGDMQIPFFTVLGQADWDGNYNAELLKGQNVYLNGH  127 (394)
T ss_pred             HHHHHHhCCCCEEEECCccc-cCCCCCccchhHHhhHhhhccCcchhhCCCeEEeCCcccccCCchhhhccccccccccc
Confidence            56788899999999999999 899999999999999999998877  899999999999999988887753111      


Q ss_pred             -----------ccCCCceeeeeeE-e----c-------------CceEEEEEEeCccccccccCCCCCCCCCccccchhh
Q 024595           73 -----------RKDSRWLCSRSFI-L----D-------------AEIAEFVFVDTTPFVDEYFEDPGDSTYDWRGVYRRK  123 (265)
Q Consensus        73 -----------~~~~~~~~~~~y~-~----~-------------~~~~~~i~lds~~~~~~~~~~~~~~~~~~~~~~~~~  123 (265)
                                 ..+++|.+|..|+ +    .             ...+.||++||..+...+         .+.      
T Consensus       128 ~~~~~~y~~~~~~~~RW~mP~~yY~~~~~f~~~~~~~~~~~~~~~~~v~fifiDT~~l~~~~---------~~~------  192 (394)
T PTZ00422        128 GQTDIEYDSNNDIYPKWIMPNYWYHYFTHFTDTSGPSLLKSGHKDMSVAFIFIDTWILSSSF---------PYK------  192 (394)
T ss_pred             cccccccccccccCCCccCCchhheeeeeeecccccccccccCCCCEEEEEEEECchhcccC---------Ccc------
Confidence                       1257899885332 2    1             133899999998765321         111      


Q ss_pred             hhHHHHHHHHHHHhhc--CCCCeEEEEeccccccCCCCCChHHHHHHHHHHHHhCCccEEEeCCcccceEEeeCCeEEEE
Q 024595          124 EYLSDLLKDVDGALKN--SKAKWKIVVGHHTIKSAGHHGVTKELLLRLLPILEENNVDMYVNGHDHCLQHISSNGIEFLT  201 (265)
Q Consensus       124 ~~~~~Q~~wl~~~l~~--~~~~~~iv~~H~P~~~~~~~~~~~~~~~~l~~~~~~~~v~~vl~GH~H~~~~~~~~~~~~i~  201 (265)
                      ...+.|++||+++|+.  +.++|+||+.|||+++.+.|+...++...|.++|++++|+++++||.|+.++....++.|++
T Consensus       193 ~~~~~~w~~L~~~L~~a~k~a~WkIVvGHhPIySsG~hg~~~~L~~~L~PLL~ky~VdlYisGHDH~lq~i~~~gt~yIv  272 (394)
T PTZ00422        193 KVSERAWQDLKATLEYAPKIADYIIVVGDKPIYSSGSSKGDSYLSYYLLPLLKDAQVDLYISGYDRNMEVLTDEGTAHIN  272 (394)
T ss_pred             ccCHHHHHHHHHHHHhhccCCCeEEEEecCceeecCCCCCCHHHHHHHHHHHHHcCcCEEEEccccceEEecCCCceEEE
Confidence            1234689999999964  35789999999999999988877788889999999999999999999999999889999999


Q ss_pred             eCCCCCCCCCCCCCCCCccceeeecCCCeEEEEEeCCeEEEEEEe-cCCCeEEEEEccCCCc
Q 024595          202 SGGGSKAWRGDRNWWSPEELKLYYDGQGFMSVKMTRSEAVVLFYD-VHGNILHKWSIPKEPL  262 (265)
Q Consensus       202 ~g~~~~~~~~~~~~~~~~~~~~~~~~~gy~~~~v~~~~i~~~~~~-~~g~~~~~~~i~~~~~  262 (265)
                      +|+||..++...  ...+...|.....||+.++++.+++++++++ .+|++++++++++++.
T Consensus       273 SGaGs~~~~~~~--~~~~~s~F~~~~~GF~~~~l~~~~l~~~fid~~~GkvL~~~~~~~~~~  332 (394)
T PTZ00422        273 CGSGGNSGRKSI--MKNSKSLFYSEDIGFCIHELNAEGMVTKFVSGNTGEVLYTHKQPLKKR  332 (394)
T ss_pred             eCccccccCCCC--CCCCCcceecCCCCEEEEEEecCEEEEEEEeCCCCcEEEEeeecccch
Confidence            999998775432  1244567777899999999999999999998 8999999998877643

>cd07378 MPP_ACP5 Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain

Probab=100.00  E-value=7.4e-37  Score=253.92  Aligned_cols=242  Identities=40%  Similarity=0.671  Sum_probs=174.9

Q ss_pred             cccccccCCCEEEecCCccCCCCCCCCCChhhhhhcccccCCCCCCCceEEcCCCcccCCCccccccccccccCCCceee
Q 024595            2 GLIGEKLEIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQKQWYNVLGNHDYRGDVEAQLSPVLTRKDSRWLCS   81 (265)
Q Consensus         2 ~~~~~~~~pd~vv~~GD~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~p~~~i~GNHD~~~~~~~~~~~~~~~~~~~~~~~   81 (265)
                      .+.+++.+|||||++||++|++|.....+.++.+.|..++....+++|+++++||||+..+..+...+.......+|..|
T Consensus        25 ~~~~~~~~~dfvv~~GD~~y~~g~~~~~~~~~~~~~~~~~~~~~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~  104 (277)
T cd07378          25 AKVAAELGPDFILSLGDNFYDDGVGSVDDPRFETTFEDVYSAPSLQVPWYLVLGNHDYSGNVSAQIDYTKRPNSPRWTMP  104 (277)
T ss_pred             HHHHHhcCCCEEEeCCCccccCCCCCCcchHHHHHHHHHccchhhcCCeEEecCCcccCCCchheeehhccCCCCCccCc
Confidence            34566689999999999999888766555666666666654334689999999999998764443332111113445444


Q ss_pred             -eeeEecCc------eEEEEEEeCccccccccCCCCCCCCCccccchhhhhHHHHHHHHHHHhhcCCCCeEEEEeccccc
Q 024595           82 -RSFILDAE------IAEFVFVDTTPFVDEYFEDPGDSTYDWRGVYRRKEYLSDLLKDVDGALKNSKAKWKIVVGHHTIK  154 (265)
Q Consensus        82 -~~y~~~~~------~~~~i~lds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~~wl~~~l~~~~~~~~iv~~H~P~~  154 (265)
                       .+|++..+      +++||+|||..+...+....  ...    ......+.++|++||++.|+++.++|+||++|||++
T Consensus       105 ~~~y~~~~~~~~~~~~~~~i~LDt~~~~~~~~~~~--~~~----~~~~~~~~~~Q~~wL~~~L~~~~~~~~iv~~H~P~~  178 (277)
T cd07378         105 AYYYRVSFPFPSSDTTVEFIMIDTVPLCGNSDDIA--SPY----GPPNGKLAEEQLAWLEKTLAASTADWKIVVGHHPIY  178 (277)
T ss_pred             chheEEEeecCCCCCEEEEEEEeChhHcCcccccc--ccc----cCcchhhHHHHHHHHHHHHHhcCCCeEEEEeCccce
Confidence             34556544      79999999998643221100  000    011345778999999999999877999999999998


Q ss_pred             cCCCCCChHHHHHHHHHHHHhCCccEEEeCCcccceEEeeC--CeEEEEeCCCCCCCCCCCCCCC--CccceeeecCCCe
Q 024595          155 SAGHHGVTKELLLRLLPILEENNVDMYVNGHDHCLQHISSN--GIEFLTSGGGSKAWRGDRNWWS--PEELKLYYDGQGF  230 (265)
Q Consensus       155 ~~~~~~~~~~~~~~l~~~~~~~~v~~vl~GH~H~~~~~~~~--~~~~i~~g~~~~~~~~~~~~~~--~~~~~~~~~~~gy  230 (265)
                      +...++.....++.|.+++++++|++||+||.|........  ++.|+++|+++...........  +....+.....||
T Consensus       179 ~~~~~~~~~~~~~~l~~l~~~~~v~~vl~GH~H~~~~~~~~~~~~~~i~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~Gy  258 (277)
T cd07378         179 SSGEHGPTSCLVDRLLPLLKKYKVDAYLSGHDHNLQHIKDDGSGTSFVVSGAGSKARPSVKHIDKVPQFFSGFTSSGGGF  258 (277)
T ss_pred             eCCCCCCcHHHHHHHHHHHHHcCCCEEEeCCcccceeeecCCCCcEEEEeCCCcccCCCCCccCcccccccccccCCCCE
Confidence            77655444556788999999999999999999999988876  9999999999887654321101  0112344578999


Q ss_pred             EEEEEeCCeEEEEEEecCC
Q 024595          231 MSVKMTRSEAVVLFYDVHG  249 (265)
Q Consensus       231 ~~~~v~~~~i~~~~~~~~g  249 (265)
                      .++++++++++++|++.+|
T Consensus       259 ~~i~v~~~~l~~~~~~~~g  277 (277)
T cd07378         259 AYLELTKEELTVRFYDADG  277 (277)
T ss_pred             EEEEEecCEEEEEEECCCC
Confidence            9999999999999998876

Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site ma

>cd00839 MPP_PAPs purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain

Probab=100.00  E-value=2.3e-33  Score=234.99  Aligned_cols=231  Identities=16%  Similarity=0.170  Sum_probs=161.2

Q ss_pred             cCCCEEEecCCccCCCCCCCCCChhhhhhcccccCCCCCCCceEEcCCCcccCCCccccccccc------cccCCCceee
Q 024595            8 LEIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQKQWYNVLGNHDYRGDVEAQLSPVL------TRKDSRWLCS   81 (265)
Q Consensus         8 ~~pd~vv~~GD~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~p~~~i~GNHD~~~~~~~~~~~~~------~~~~~~~~~~   81 (265)
                      .+|||||++||++|..+...+  .+|...++. +......+|+++++||||.............      .........+
T Consensus        32 ~~~d~vl~~GDl~~~~~~~~~--~~~~~~~~~-~~~~~~~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  108 (294)
T cd00839          32 GNYDAILHVGDLAYADGYNNG--SRWDTFMRQ-IEPLASYVPYMVTPGNHEADYNFSFYKIKAFFPRFRFPHSPSGSTSN  108 (294)
T ss_pred             CCccEEEEcCchhhhcCCccc--hhHHHHHHH-HHHHHhcCCcEEcCcccccccCCCCcccccccccccccCCCCCCCCC
Confidence            689999999999987654321  233322222 1111136899999999999764332211100      0000111123


Q ss_pred             eeeEecCceEEEEEEeCccccccccCCCCCCCCCccccchhhhhHHHHHHHHHHHhhcCCC---CeEEEEeccccccCCC
Q 024595           82 RSFILDAEIAEFVFVDTTPFVDEYFEDPGDSTYDWRGVYRRKEYLSDLLKDVDGALKNSKA---KWKIVVGHHTIKSAGH  158 (265)
Q Consensus        82 ~~y~~~~~~~~~i~lds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~~wl~~~l~~~~~---~~~iv~~H~P~~~~~~  158 (265)
                      .+|+++.++++||+|||.....                  ......+|++||++.|++.+.   +|+||++|+|++....
T Consensus       109 ~~Ysf~~g~v~fi~Lds~~~~~------------------~~~~~~~q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~  170 (294)
T cd00839         109 LWYSFDVGPVHFVSLSTEVDFY------------------GDGPGSPQYDWLEADLAKVDRSKTPWIIVMGHRPMYCSNT  170 (294)
T ss_pred             ceEEEeeCCEEEEEEecccccc------------------cCCCCcHHHHHHHHHHHHhcccCCCeEEEEeccCcEecCc
Confidence            5688999999999999976321                  012346899999999998533   6899999999987654


Q ss_pred             CCC----hHHHHHHHHHHHHhCCccEEEeCCcccceEEee----------------CCeEEEEeCCCCCCCCCCCCCCC-
Q 024595          159 HGV----TKELLLRLLPILEENNVDMYVNGHDHCLQHISS----------------NGIEFLTSGGGSKAWRGDRNWWS-  217 (265)
Q Consensus       159 ~~~----~~~~~~~l~~~~~~~~v~~vl~GH~H~~~~~~~----------------~~~~~i~~g~~~~~~~~~~~~~~-  217 (265)
                      ...    ....++.|.+++++++|+++|+||.|.+++...                .++.||++|+||........... 
T Consensus       171 ~~~~~~~~~~~~~~l~~ll~~~~v~~vl~GH~H~y~r~~p~~~~~~~~~~~~~~~~~g~~yiv~G~~G~~~~~~~~~~~~  250 (294)
T cd00839         171 DHDDCIEGEKMRAALEDLFYKYGVDLVLSGHVHAYERTCPVYNGTVVGDCNPYSNPKGPVHIVIGAGGNDEGLDPFSAPP  250 (294)
T ss_pred             cccccchhHHHHHHHHHHHHHhCCCEEEEccceeeEeechhhCCEeccccccccCCCccEEEEECCCccccCcCcccCCC
Confidence            322    345668899999999999999999999987653                68999999999987653321111 


Q ss_pred             CccceeeecCCCeEEEEEeCC-eEEEEEEe-cCCCeEEEEEccC
Q 024595          218 PEELKLYYDGQGFMSVKMTRS-EAVVLFYD-VHGNILHKWSIPK  259 (265)
Q Consensus       218 ~~~~~~~~~~~gy~~~~v~~~-~i~~~~~~-~~g~~~~~~~i~~  259 (265)
                      +....+....+||.++++.++ .|.+++++ .+|+++++++|.|
T Consensus       251 ~~~~~~~~~~~g~~~~~~~~~t~l~~~~~~~~~g~v~D~f~i~k  294 (294)
T cd00839         251 PAWSAFRESDYGFGRLTVHNSTHLHFEWIRNDDGVVIDSFWIIK  294 (294)
T ss_pred             CCceEEEeccCCEEEEEEEecCeEEEEEEECCCCeEEEEEEEeC
Confidence            122344567899999999887 99999997 6799999999976

Purple acid phosphatases (PAPs) belong to a diverse family of binuclear metallohydrolases that have been identified and characterized in plants, animals, and fungi. PAPs contain a binuclear metal center and their characteristic pink or purple color derives from a charge-transfer transition between a tyrosine residue and a chromophoric ferric ion within the binuclear center. PAPs catalyze the hydrolysis of a wide range of activated phosphoric acid mono- and di-esters and anhydrides. PAPs are distinguished from the other phosphatases by their insensitivity to L-(+) tartrate inhibition and are therefore also known as tartrate resistant acid phosphatases (TRAPs). While only a few copies of PAP-like genes are present in mammalian and fungal genomes, multiple copies are present in plant genomes. PAPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diver

>PLN02533 probable purple acid phosphatase

Probab=99.97  E-value=9.2e-29  Score=214.77  Aligned_cols=231  Identities=16%  Similarity=0.160  Sum_probs=155.2

Q ss_pred             ccccCCCEEEecCCccCCCCCCCCCChhhhhhcccccCCCCCCCceEEcCCCcccCCCccccccccccccCCCcee----
Q 024595            5 GEKLEIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQKQWYNVLGNHDYRGDVEAQLSPVLTRKDSRWLC----   80 (265)
Q Consensus         5 ~~~~~pd~vv~~GD~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~p~~~i~GNHD~~~~~~~~~~~~~~~~~~~~~~----   80 (265)
                      +++.+|||||++||++|.++    ....|.+.++ ....-...+|+++++||||........ ...+.....+|.+    
T Consensus       161 i~~~~pD~vl~~GDl~y~~~----~~~~wd~f~~-~i~~l~s~~P~m~~~GNHE~~~~~~~~-~~~f~~y~~rf~mP~~~  234 (427)
T PLN02533        161 VSKWDYDVFILPGDLSYANF----YQPLWDTFGR-LVQPLASQRPWMVTHGNHELEKIPILH-PEKFTAYNARWRMPFEE  234 (427)
T ss_pred             HHhcCCCEEEEcCccccccc----hHHHHHHHHH-HhhhHhhcCceEEeCcccccccccccc-CcCccchhhcccCCccc
Confidence            34568999999999998643    2234433322 222112368999999999986421000 0001111122322    


Q ss_pred             -----eeeeEecCceEEEEEEeCccccccccCCCCCCCCCccccchhhhhHHHHHHHHHHHhhcC---CCCeEEEEeccc
Q 024595           81 -----SRSFILDAEIAEFVFVDTTPFVDEYFEDPGDSTYDWRGVYRRKEYLSDLLKDVDGALKNS---KAKWKIVVGHHT  152 (265)
Q Consensus        81 -----~~~y~~~~~~~~~i~lds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~~wl~~~l~~~---~~~~~iv~~H~P  152 (265)
                           +.+|+|+.++++||+||+....                     ....+|++||++.|++.   +..|+|+++|+|
T Consensus       235 ~g~~~~~yYSfd~g~vhfI~Lds~~~~---------------------~~~~~Q~~WLe~dL~~~~r~~~pwiIv~~H~P  293 (427)
T PLN02533        235 SGSTSNLYYSFNVYGVHIIMLGSYTDF---------------------EPGSEQYQWLENNLKKIDRKTTPWVVAVVHAP  293 (427)
T ss_pred             cCCCCCceEEEEECCEEEEEEeCCccc---------------------cCchHHHHHHHHHHHhhcccCCCEEEEEeCCC
Confidence                 2468899999999999996410                     01358999999999984   346899999999


Q ss_pred             cccCCC-C-CC--hHHHHHHHHHHHHhCCccEEEeCCcccceEEee--------CCeEEEEeCCCCCCCCC--CCCCCCC
Q 024595          153 IKSAGH-H-GV--TKELLLRLLPILEENNVDMYVNGHDHCLQHISS--------NGIEFLTSGGGSKAWRG--DRNWWSP  218 (265)
Q Consensus       153 ~~~~~~-~-~~--~~~~~~~l~~~~~~~~v~~vl~GH~H~~~~~~~--------~~~~~i~~g~~~~~~~~--~~~~~~~  218 (265)
                      ++.... + +.  ...+++.|.+++.+++|+++|+||.|.+++...        .++.||++|+||.....  ......+
T Consensus       294 ~y~s~~~~~~~~~~~~~r~~le~Ll~~~~VdlvlsGH~H~YeR~~p~~~~~~~~~gpvyiv~G~gG~~e~~~~~~~~~~~  373 (427)
T PLN02533        294 WYNSNEAHQGEKESVGMKESMETLLYKARVDLVFAGHVHAYERFDRVYQGKTDKCGPVYITIGDGGNREGLATKYIDPKP  373 (427)
T ss_pred             eeecccccCCcchhHHHHHHHHHHHHHhCCcEEEecceecccccccccCCccCCCCCEEEEeCCCccccccccccCCCCC
Confidence            997643 2 21  234567899999999999999999999988643        67899999999876421  1110012


Q ss_pred             ccceeeecCCCeEEEEE-eCCeEEEEEEe-cCC--CeEEEEEccCCCc
Q 024595          219 EELKLYYDGQGFMSVKM-TRSEAVVLFYD-VHG--NILHKWSIPKEPL  262 (265)
Q Consensus       219 ~~~~~~~~~~gy~~~~v-~~~~i~~~~~~-~~g--~~~~~~~i~~~~~  262 (265)
                      ....+....+||.++++ +...+.++++. -+|  .+.|++.|.|-..
T Consensus       374 ~~s~~r~~~~G~~~l~v~n~t~l~~~~~~~~~~~~~~~D~~~i~~~~~  421 (427)
T PLN02533        374 DISLFREASFGHGQLNVVDANTMEWTWHRNDDDQSVASDSVWLKSLLT  421 (427)
T ss_pred             CceeEEeccCCEEEEEEEcCCeEEEEEEecCCCCceeeeEEEEEeccC
Confidence            22344456899999997 56699999986 444  3678888887644

>cd07395 MPP_CSTP1 Homo sapiens CSTP1 and related proteins, metallophosphatase domain

Probab=99.96  E-value=1.1e-28  Score=203.20  Aligned_cols=203  Identities=18%  Similarity=0.174  Sum_probs=139.4

Q ss_pred             CCCEEEecCCccCCCCCCCCCChhhhhhcccccCCCCCCCceEEcCCCcccCCCccc-cccccccccCCCceeeeeeEec
Q 024595            9 EIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQKQWYNVLGNHDYRGDVEA-QLSPVLTRKDSRWLCSRSFILD   87 (265)
Q Consensus         9 ~pd~vv~~GD~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~p~~~i~GNHD~~~~~~~-~~~~~~~~~~~~~~~~~~y~~~   87 (265)
                      +|||||++||+++ ++.......+..+.+..++......+|+++++||||....... .+.. +.   ..| .+.+|++.
T Consensus        49 ~pd~ii~~GDl~~-~~~~~~~~~~~~~~~~~~~~~~~~~vp~~~i~GNHD~~~~~~~~~~~~-f~---~~~-g~~~y~~~  122 (262)
T cd07395          49 KPKFVVVCGDLVN-AMPGDELRERQVSDLKDVLSLLDPDIPLVCVCGNHDVGNTPTEESIKD-YR---DVF-GDDYFSFW  122 (262)
T ss_pred             CCCEEEEeCCcCC-CCcchhhHHHHHHHHHHHHhhccCCCcEEEeCCCCCCCCCCChhHHHH-HH---HHh-CCcceEEE
Confidence            8999999999994 3322111111112233333221236899999999998643211 1111 10   111 13456777


Q ss_pred             CceEEEEEEeCccccccccCCCCCCCCCccccchhhhhHHHHHHHHHHHhhcC---CCCeEEEEeccccccCCCCC----
Q 024595           88 AEIAEFVFVDTTPFVDEYFEDPGDSTYDWRGVYRRKEYLSDLLKDVDGALKNS---KAKWKIVVGHHTIKSAGHHG----  160 (265)
Q Consensus        88 ~~~~~~i~lds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~~wl~~~l~~~---~~~~~iv~~H~P~~~~~~~~----  160 (265)
                      .++++||+|||..+...            .+   ...+..+|++||++.|+++   +.+++||++|+|++......    
T Consensus       123 ~~~~~~i~lds~~~~~~------------~~---~~~~~~~ql~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~  187 (262)
T cd07395         123 VGGVFFIVLNSQLFFDP------------SE---VPELAQAQDVWLEEQLEIAKESDCKHVIVFQHIPWFLEDPDEEDSY  187 (262)
T ss_pred             ECCEEEEEeccccccCc------------cc---cccchHHHHHHHHHHHHHHHhccCCcEEEEECcCCccCCCCCCccc
Confidence            78999999999864210            00   0134679999999999986   46789999999997543221    


Q ss_pred             --ChHHHHHHHHHHHHhCCccEEEeCCcccceEEeeCCeEEEEeCCCCCCCCCCCCCCCCccceeeecCCCeEEEEEeCC
Q 024595          161 --VTKELLLRLLPILEENNVDMYVNGHDHCLQHISSNGIEFLTSGGGSKAWRGDRNWWSPEELKLYYDGQGFMSVKMTRS  238 (265)
Q Consensus       161 --~~~~~~~~l~~~~~~~~v~~vl~GH~H~~~~~~~~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~gy~~~~v~~~  238 (265)
                        .....+.+|.+++++++|+++||||+|........++.++++++++....              ...+||.+++++++
T Consensus       188 ~~~~~~~~~~l~~ll~~~~V~~v~~GH~H~~~~~~~~g~~~~~~~~~~~~~~--------------~~~~g~~~~~v~~~  253 (262)
T cd07395         188 FNIPKSVRKPLLDKFKKAGVKAVFSGHYHRNAGGRYGGLEMVVTSAIGAQLG--------------NDKSGLRIVKVTED  253 (262)
T ss_pred             CCcCHHHHHHHHHHHHhcCceEEEECccccCCceEECCEEEEEcCceecccC--------------CCCCCcEEEEECCC
Confidence              12345678999999999999999999999888789999998888875432              13579999999999


Q ss_pred             eEEEEEEe
Q 024595          239 EAVVLFYD  246 (265)
Q Consensus       239 ~i~~~~~~  246 (265)
                      ++++++|.
T Consensus       254 ~~~~~~~~  261 (262)
T cd07395         254 KIVHEYYS  261 (262)
T ss_pred             ceeeeeee
Confidence            99999985

CSTP1 (complete S-transactivated protein 1) is an uncharacterized Homo sapiens protein with a metallophosphatase domain, that is transactivated by the complete S protein of hepatitis B virus. CSTP1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is th

>KOG1378 consensus Purple acid phosphatase [Carbohydrate transport and metabolism]

Probab=99.93  E-value=1.2e-24  Score=183.90  Aligned_cols=228  Identities=19%  Similarity=0.243  Sum_probs=157.1

Q ss_pred             ccCCCEEEecCCccCCCCCCCCCChhhhhhcccccCCCCCCCceEEcCCCcccCCCccccccccccccCCCceee-----
Q 024595            7 KLEIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQKQWYNVLGNHDYRGDVEAQLSPVLTRKDSRWLCS-----   81 (265)
Q Consensus         7 ~~~pd~vv~~GD~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~p~~~i~GNHD~~~~~~~~~~~~~~~~~~~~~~~-----   81 (265)
                      +.++|+|++.||+.|+++.....-.+|..+.+.+    ...+|++++.||||........+    .....||.+|     
T Consensus       172 ~~k~d~vlhiGDlsYa~~~~n~~wD~f~r~vEp~----As~vPymv~~GNHE~d~~~~~~F----~~y~~Rf~mP~~~s~  243 (452)
T KOG1378|consen  172 NLKPDAVLHIGDLSYAMGYSNWQWDEFGRQVEPI----ASYVPYMVCSGNHEIDWPPQPCF----VPYSARFNMPGNSSE  243 (452)
T ss_pred             ccCCcEEEEecchhhcCCCCccchHHHHhhhhhh----hccCceEEecccccccCCCcccc----cccceeeccCCCcCC
Confidence            3479999999999998864421112233332322    34799999999999865422211    1222334332     


Q ss_pred             ----eeeEecCceEEEEEEeCccccccccCCCCCCCCCccccchhhhhHHHHHHHHHHHhhcC-C--CCeEEEEeccccc
Q 024595           82 ----RSFILDAEIAEFVFVDTTPFVDEYFEDPGDSTYDWRGVYRRKEYLSDLLKDVDGALKNS-K--AKWKIVVGHHTIK  154 (265)
Q Consensus        82 ----~~y~~~~~~~~~i~lds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~~wl~~~l~~~-~--~~~~iv~~H~P~~  154 (265)
                          ..|+|+.+.++||+|+|..+. .              .    ....+|.+||+++|++. +  ..|+|++.|.|++
T Consensus       244 s~~~l~YSfd~G~vhfv~lsse~~~-~--------------~----~~~~~QY~WL~~dL~~v~r~~tPWlIv~~HrP~Y  304 (452)
T KOG1378|consen  244 SDSNLYYSFDVGGVHFVVLSTETYY-N--------------F----LKGTAQYQWLERDLASVDRKKTPWLIVQGHRPMY  304 (452)
T ss_pred             CCCceeEEEeeccEEEEEEeccccc-c--------------c----cccchHHHHHHHHHHHhcccCCCeEEEEecccce
Confidence                468899999999999998753 0              0    12358999999999984 3  4799999999999


Q ss_pred             cCCC--C---CChHHHHHHHHHHHHhCCccEEEeCCcccceEEee------------------CCeEEEEeCCCCCCCCC
Q 024595          155 SAGH--H---GVTKELLLRLLPILEENNVDMYVNGHDHCLQHISS------------------NGIEFLTSGGGSKAWRG  211 (265)
Q Consensus       155 ~~~~--~---~~~~~~~~~l~~~~~~~~v~~vl~GH~H~~~~~~~------------------~~~~~i~~g~~~~~~~~  211 (265)
                      ....  +   |.....+..|.+++-+++|++||.||.|.+++..+                  .+..||++|++|.....
T Consensus       305 ~S~~~~~~reG~~~~~~~~LE~l~~~~~VDvvf~GHvH~YER~~piyn~~~~~~~~~~~~~d~~aPvyI~~G~~G~~e~~  384 (452)
T KOG1378|consen  305 CSSNDAHYREGEFESMREGLEPLFVKYKVDVVFWGHVHRYERFCPIYNNTCGTGWGPVHLVDGMAPIYITVGDGGNHEHL  384 (452)
T ss_pred             ecCCchhhccCcchhhHHHHHHHHHHhceeEEEeccceehhccchhhcceeeccCCcccccCCCCCEEEEEccCCccccc
Confidence            7665  3   33335567899999999999999999999988543                  35668888888853221


Q ss_pred             CCC-CCCCccceeeecCCCeEEEEEeCC-eEEEEEEe---cCCCeEEEEEccCCC
Q 024595          212 DRN-WWSPEELKLYYDGQGFMSVKMTRS-EAVVLFYD---VHGNILHKWSIPKEP  261 (265)
Q Consensus       212 ~~~-~~~~~~~~~~~~~~gy~~~~v~~~-~i~~~~~~---~~g~~~~~~~i~~~~  261 (265)
                      ... ...++...+-....||.++++.+. .+.++.+.   .+|+.++.+-+.|+.
T Consensus       385 ~~~~~~~p~~Sa~R~~dfG~~~L~v~N~TH~~~~~~~~~d~~g~~~D~fwl~k~~  439 (452)
T KOG1378|consen  385 DPFSSPQPEWSAFREGDFGYTRLTAKNGTHAHVHWVRNSDASGVVIDSFWLIKDY  439 (452)
T ss_pred             CcccCCCCcccccccccCCeEEEEEecCceEEEEEEeccCCCceEeeeEEEEccc
Confidence            110 011233344557899999999864 55565554   458899999888873

>PRK11148 cyclic 3',5'-adenosine monophosphate phosphodiesterase; Provisional

Probab=99.93  E-value=1.1e-24  Score=180.42  Aligned_cols=205  Identities=19%  Similarity=0.224  Sum_probs=132.6

Q ss_pred             cCCCEEEecCCccCCCCCCCCCChhhhhhcccccCCCCCCCceEEcCCCcccCCCccccccccccccCCCceeeeeeEec
Q 024595            8 LEIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQKQWYNVLGNHDYRGDVEAQLSPVLTRKDSRWLCSRSFILD   87 (265)
Q Consensus         8 ~~pd~vv~~GD~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~p~~~i~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~y~~~   87 (265)
                      .+|||||++||++. ++.    ..++ +.+...+  ..+++|+++++||||........+.    ..  .+ .+..+.+.
T Consensus        54 ~~~D~vvitGDl~~-~~~----~~~~-~~~~~~l--~~l~~Pv~~v~GNHD~~~~~~~~~~----~~--~~-~~~~~~~~  118 (275)
T PRK11148         54 HEFDLIVATGDLAQ-DHS----SEAY-QHFAEGI--APLRKPCVWLPGNHDFQPAMYSALQ----DA--GI-SPAKHVLI  118 (275)
T ss_pred             CCCCEEEECCCCCC-CCC----HHHH-HHHHHHH--hhcCCcEEEeCCCCCChHHHHHHHh----hc--CC-CccceEEe
Confidence            47999999999994 331    1222 2222222  2467899999999998643222111    10  11 11222344


Q ss_pred             CceEEEEEEeCccccccccCCCCCCCCCccccchhhhhHHHHHHHHHHHhhcCCCCeEEEEeccccccCCCC-CC--hHH
Q 024595           88 AEIAEFVFVDTTPFVDEYFEDPGDSTYDWRGVYRRKEYLSDLLKDVDGALKNSKAKWKIVVGHHTIKSAGHH-GV--TKE  164 (265)
Q Consensus        88 ~~~~~~i~lds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~~wl~~~l~~~~~~~~iv~~H~P~~~~~~~-~~--~~~  164 (265)
                      .++++||+|||.....                 +.+.++++|++||++.|++.+.++.+|++|||+...+.. .+  ...
T Consensus       119 ~~~~~~i~Lds~~~g~-----------------~~G~l~~~ql~wL~~~L~~~~~~~~vv~~hH~P~~~~~~~~d~~~l~  181 (275)
T PRK11148        119 GEHWQILLLDSQVFGV-----------------PHGELSEYQLEWLERKLADAPERHTLVLLHHHPLPAGCAWLDQHSLR  181 (275)
T ss_pred             cCCEEEEEecCCCCCC-----------------cCCEeCHHHHHHHHHHHhhCCCCCeEEEEcCCCCCCCcchhhccCCC
Confidence            4679999999975321                 012356799999999999877777788888766543321 11  111


Q ss_pred             HHHHHHHHHHhC-CccEEEeCCcccceEEeeCCeEEEEeCCCCCCCCCCCCCCCCccceeeecCCCeEEEEEeCC-eEEE
Q 024595          165 LLLRLLPILEEN-NVDMYVNGHDHCLQHISSNGIEFLTSGGGSKAWRGDRNWWSPEELKLYYDGQGFMSVKMTRS-EAVV  242 (265)
Q Consensus       165 ~~~~l~~~~~~~-~v~~vl~GH~H~~~~~~~~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~gy~~~~v~~~-~i~~  242 (265)
                      ..++|.++++++ +|+++|+||+|........|+.++++++.+..+.....     ...+.....||.++++.++ ++..
T Consensus       182 n~~~l~~ll~~~~~v~~vl~GH~H~~~~~~~~gi~~~~~ps~~~q~~~~~~-----~~~~~~~~~g~~~~~l~~~g~~~~  256 (275)
T PRK11148        182 NAHELAEVLAKFPNVKAILCGHIHQELDLDWNGRRLLATPSTCVQFKPHCT-----NFTLDTVAPGWRELELHADGSLET  256 (275)
T ss_pred             CHHHHHHHHhcCCCceEEEecccChHHhceECCEEEEEcCCCcCCcCCCCC-----ccccccCCCcEEEEEEcCCCcEEE
Confidence            236789999997 89999999999988777799999998888866532221     1112234579999999755 6776


Q ss_pred             EEEecCC
Q 024595          243 LFYDVHG  249 (265)
Q Consensus       243 ~~~~~~g  249 (265)
                      +.....+
T Consensus       257 ~~~~~~~  263 (275)
T PRK11148        257 EVHRLAD  263 (275)
T ss_pred             EEEEcCC
Confidence            6655443

>cd07402 MPP_GpdQ Enterobacter aerogenes GpdQ and related proteins, metallophosphatase domain

Probab=99.93  E-value=3.9e-25  Score=179.92  Aligned_cols=196  Identities=21%  Similarity=0.231  Sum_probs=132.5

Q ss_pred             CCCEEEecCCccCCCCCCCCCChhhhhhcccccCCCCCCCceEEcCCCcccCCCccccccccccccCCCceeeeeeEecC
Q 024595            9 EIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQKQWYNVLGNHDYRGDVEAQLSPVLTRKDSRWLCSRSFILDA   88 (265)
Q Consensus         9 ~pd~vv~~GD~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~p~~~i~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~   88 (265)
                      +||+||++||++. .+..    .++ +.+..++  ..+++|+++|+||||........+.    .... -.....|.+..
T Consensus        40 ~~d~vi~~GDl~~-~~~~----~~~-~~~~~~l--~~~~~p~~~v~GNHD~~~~~~~~~~----~~~~-~~~~~~~~~~~  106 (240)
T cd07402          40 RPDLVLVTGDLTD-DGSP----ESY-ERLRELL--AALPIPVYLLPGNHDDRAAMRAVFP----ELPP-APGFVQYVVDL  106 (240)
T ss_pred             CCCEEEECccCCC-CCCH----HHH-HHHHHHH--hhcCCCEEEeCCCCCCHHHHHHhhc----cccc-cccccceeEec
Confidence            8999999999994 3211    122 2222322  2358999999999998543222111    1000 01124567888


Q ss_pred             ceEEEEEEeCccccccccCCCCCCCCCccccchhhhhHHHHHHHHHHHhhcCCCCeEEEEeccccccCCCCC-C--hHHH
Q 024595           89 EIAEFVFVDTTPFVDEYFEDPGDSTYDWRGVYRRKEYLSDLLKDVDGALKNSKAKWKIVVGHHTIKSAGHHG-V--TKEL  165 (265)
Q Consensus        89 ~~~~~i~lds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~~wl~~~l~~~~~~~~iv~~H~P~~~~~~~~-~--~~~~  165 (265)
                      ++++|+++|+.....         .        ...+.++|++||++.|++...+++|+++|+|++...... .  ....
T Consensus       107 ~~~~~i~lds~~~~~---------~--------~~~~~~~ql~wL~~~L~~~~~~~~il~~H~pp~~~~~~~~~~~~~~~  169 (240)
T cd07402         107 GGWRLILLDSSVPGQ---------H--------GGELCAAQLDWLEAALAEAPDKPTLVFLHHPPFPVGIAWMDAIGLRN  169 (240)
T ss_pred             CCEEEEEEeCCCCCC---------c--------CCEECHHHHHHHHHHHHhCCCCCEEEEECCCCccCCchhhhhhhCCC
Confidence            899999999875311         0        112457899999999999877889999999987653211 1  1112


Q ss_pred             HHHHHHHHHhC-CccEEEeCCcccceEEeeCCeEEEEeCCCCCCCCCCCCCCCCccceeeecCCCeEEEEEeCCe
Q 024595          166 LLRLLPILEEN-NVDMYVNGHDHCLQHISSNGIEFLTSGGGSKAWRGDRNWWSPEELKLYYDGQGFMSVKMTRSE  239 (265)
Q Consensus       166 ~~~l~~~~~~~-~v~~vl~GH~H~~~~~~~~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~gy~~~~v~~~~  239 (265)
                      .+++.+++.++ +++++|+||+|.......+++.++++|+.+..+....     +.........||..+++.++.
T Consensus       170 ~~~~~~~l~~~~~v~~v~~GH~H~~~~~~~~g~~~~~~gs~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~  239 (240)
T cd07402         170 AEALAAVLARHPNVRAILCGHVHRPIDGSWGGIPLLTAPSTCHQFAPDL-----DDFALDALAPGYRALSLHEDG  239 (240)
T ss_pred             HHHHHHHHhcCCCeeEEEECCcCchHHeEECCEEEEEcCcceeeecCCC-----CcccccccCCCCcEEEEecCC
Confidence            56788999998 9999999999999888889999999999987764222     111222346699999886553

GpdQ (glycerophosphodiesterase Q, also known as Rv0805 in Mycobacterium tuberculosis) is a binuclear metallophosphoesterase from Enterobacter aerogenes that catalyzes the hydrolysis of mono-, di-, and triester substrates, including some organophosphate pesticides and products of the degradation of nerve agents. The GpdQ homolog, Rv0805, has 2',3'-cyclic nucleotide phosphodiesterase activity. GpdQ and Rv0805 belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosa

>cd07396 MPP_Nbla03831 Homo sapiens Nbla03831 and related proteins, metallophosphatase domain

Probab=99.92  E-value=1.4e-24  Score=178.88  Aligned_cols=213  Identities=19%  Similarity=0.184  Sum_probs=134.2

Q ss_pred             cccCCCEEEecCCccCCCCCCCCCChhhhhhcccccCCCCCCCceEEcCCCcccCCCccccccccccccCCCceeeeeeE
Q 024595            6 EKLEIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQKQWYNVLGNHDYRGDVEAQLSPVLTRKDSRWLCSRSFI   85 (265)
Q Consensus         6 ~~~~pd~vv~~GD~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~p~~~i~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~y~   85 (265)
                      .+.+||+||++||++. .+.. ....++... ...+  ..+++|+++++||||..............    ....+.+|+
T Consensus        37 ~~~~~d~vv~~GDlv~-~~~~-~~~~~~~~~-~~~l--~~l~~p~~~v~GNHD~~~~~~~~~~~~~~----~~~~~~yys  107 (267)
T cd07396          37 NRESLDFVVQLGDIID-GDNA-RAEEALDAV-LAIL--DRLKGPVHHVLGNHDLYNPSREYLLLYTL----LGLGAPYYS  107 (267)
T ss_pred             HcCCCCEEEECCCeec-CCCc-hHHHHHHHH-HHHH--HhcCCCEEEecCccccccccHhhhhcccc----cCCCCceEE
Confidence            3457999999999994 3311 011223222 2222  24679999999999987543222210000    011224577


Q ss_pred             ecCceEEEEEEeCcccccccc-CCC--------CCCC-CCcc--c-cchhhhhHHHHHHHHHHHhhcC--CCCeEEEEec
Q 024595           86 LDAEIAEFVFVDTTPFVDEYF-EDP--------GDST-YDWR--G-VYRRKEYLSDLLKDVDGALKNS--KAKWKIVVGH  150 (265)
Q Consensus        86 ~~~~~~~~i~lds~~~~~~~~-~~~--------~~~~-~~~~--~-~~~~~~~~~~Q~~wl~~~l~~~--~~~~~iv~~H  150 (265)
                      +..++++|++||+........ ...        .... ...+  . ....+.+.++|++||++.|+..  ..+++||++|
T Consensus       108 f~~~~~~~i~lds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~~~Ql~WL~~~L~~~~~~~~~viV~~H  187 (267)
T cd07396         108 FSPGGIRFIVLDGYDISALGRPEDTPKAENADDNSNLGLYLSEPRFVDWNGGIGEEQLQWLRNELQEADANGEKVIIFSH  187 (267)
T ss_pred             EecCCcEEEEEeCCccccccCCCCChhhhhHHHhchhhhhccCccceeccCcCCHHHHHHHHHHHHHHHhcCCeEEEEEe
Confidence            888899999999965321000 000        0000 0000  0 0002346689999999999874  3467899999


Q ss_pred             cccccCCC-CCChHHHHHHHHHHHHhC-CccEEEeCCcccceEEeeCCeEEEEeCCCCCCCCCCCCCCCCccceeeecCC
Q 024595          151 HTIKSAGH-HGVTKELLLRLLPILEEN-NVDMYVNGHDHCLQHISSNGIEFLTSGGGSKAWRGDRNWWSPEELKLYYDGQ  228 (265)
Q Consensus       151 ~P~~~~~~-~~~~~~~~~~l~~~~~~~-~v~~vl~GH~H~~~~~~~~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~  228 (265)
                      +|++.... ........+.+.++++++ +|+++|+||+|.......+|+.++++|+.+.. ..              ...
T Consensus       188 hp~~~~~~~~~~~~~~~~~~~~ll~~~~~V~~v~~GH~H~~~~~~~~gi~~~~~~a~~~~-~~--------------~~~  252 (267)
T cd07396         188 FPLHPESTSPHGLLWNHEEVLSILRAYGCVKACISGHDHEGGYAQRHGIHFLTLEGMVET-PP--------------ESN  252 (267)
T ss_pred             ccCCCCCCCccccccCHHHHHHHHHhCCCEEEEEcCCcCCCCccccCCeeEEEechhhcC-CC--------------CCC
Confidence            99876542 111111246788999985 89999999999999877899999999988866 21              355


Q ss_pred             CeEEEEEeCCeEEE
Q 024595          229 GFMSVKMTRSEAVV  242 (265)
Q Consensus       229 gy~~~~v~~~~i~~  242 (265)
                      -|.++.+.++++.+
T Consensus       253 ~~~~~~~~~~~~~~  266 (267)
T cd07396         253 AFGVVIVYEDRLIL  266 (267)
T ss_pred             ceEEEEEeCCceee
Confidence            88999999988754

Nbla03831 (also known as LOC56985) is an uncharacterized Homo sapiens protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.

>cd07401 MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metallophosphatase domain

Probab=99.88  E-value=3.7e-22  Score=163.27  Aligned_cols=182  Identities=18%  Similarity=0.252  Sum_probs=109.0

Q ss_pred             ccccccCCCEEEecCCccCCCCCC----CCCC-hhhhhhcccccCCCCC-CCceEEcCCCcccCCCcc--cccccccccc
Q 024595            3 LIGEKLEIDFVISTGDNFYEDGLT----GEED-PAFLDSFTSIYTAPSL-QKQWYNVLGNHDYRGDVE--AQLSPVLTRK   74 (265)
Q Consensus         3 ~~~~~~~pd~vv~~GD~~~~~g~~----~~~~-~~~~~~~~~~~~~~~l-~~p~~~i~GNHD~~~~~~--~~~~~~~~~~   74 (265)
                      +.+++.+||++|++||++. .+..    .... .+|...++.+.....+ +.|++.++||||.++...  ....+ +.+.
T Consensus        27 ~~i~~~~pd~i~~~GD~~d-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~GNHD~~~~~~~~~~~~~-~~~y  104 (256)
T cd07401          27 NFIDVIKPALVLATGDLTD-NKTGNKLPSYQYQEEWQKYYNILKESSVINKEKWFDIRGNHDLFNIPSLDSENNY-YRKY  104 (256)
T ss_pred             HHHHhhCCCEEEEcccccc-ccccCCCcccccHHHHHHHHHHHHHhCCCCcceEEEeCCCCCcCCCCCccchhhH-HHHh
Confidence            3456789999999999993 2221    1111 2232222222222223 589999999999975322  11111 1111


Q ss_pred             CCCceee-eeeE--ecCceEEEEEEeCccccccccCCCCCCCCCccccchhhhhHHHHHHHHHHHhhcC-CCCeEEEEec
Q 024595           75 DSRWLCS-RSFI--LDAEIAEFVFVDTTPFVDEYFEDPGDSTYDWRGVYRRKEYLSDLLKDVDGALKNS-KAKWKIVVGH  150 (265)
Q Consensus        75 ~~~~~~~-~~y~--~~~~~~~~i~lds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~~wl~~~l~~~-~~~~~iv~~H  150 (265)
                      ...+..+ .+|.  +..++++||+|||..+...      .....+     .+.+.++|++||++.|+++ +.+++||++|
T Consensus       105 ~~~~~~~~~~~~~~~~~~~~~~I~Ldt~~~~~~------~~~~~~-----~g~l~~~ql~wL~~~L~~~~~~~~~IV~~H  173 (256)
T cd07401         105 SATGRDGSFSFSHTTRFGNYSFIGVDPTLFPGP------KRPFNF-----FGSLDKKLLDRLEKELEKSTNSNYTIWFGH  173 (256)
T ss_pred             heecCCCccceEEEecCCCEEEEEEcCccCCCC------CCCCce-----eccCCHHHHHHHHHHHHhcccCCeEEEEEc
Confidence            1111111 1222  3358899999999874221      000111     1345679999999999875 4578999999


Q ss_pred             cccccCCCCCChHHHHHHHHHHHHhCCccEEEeCCcccceE---EeeCCeEE
Q 024595          151 HTIKSAGHHGVTKELLLRLLPILEENNVDMYVNGHDHCLQH---ISSNGIEF  199 (265)
Q Consensus       151 ~P~~~~~~~~~~~~~~~~l~~~~~~~~v~~vl~GH~H~~~~---~~~~~~~~  199 (265)
                      +|+......... . ...+.+++++++|+++||||+|....   ...+++++
T Consensus       174 hP~~~~~~~~~~-~-~~~~~~ll~~~~v~~vl~GH~H~~~~~~p~h~~~~~~  223 (256)
T cd07401         174 YPTSTIISPSAK-S-SSKFKDLLKKYNVTAYLCGHLHPLGGLEPVHYAGHPY  223 (256)
T ss_pred             ccchhccCCCcc-h-hHHHHHHHHhcCCcEEEeCCccCCCcceeeeecCCce
Confidence            998653322211 1 22389999999999999999999988   23355543

TMEM62 (transmembrane protein 62) is an uncharacterized Homo sapiens transmembrane protein with an N-terminal metallophosphatase domain. TMEM62 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.

>cd07399 MPP_YvnB Bacillus subtilis YvnB and related proteins, metallophosphatase domain

Probab=99.84  E-value=1.4e-20  Score=149.97  Aligned_cols=129  Identities=21%  Similarity=0.252  Sum_probs=86.2

Q ss_pred             cccccCCCEEEecCCccCCCCCCCCCChhhhhhcccccCCCCCCCceEEcCCCcccCCCccccccccccccCCCceeeee
Q 024595            4 IGEKLEIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQKQWYNVLGNHDYRGDVEAQLSPVLTRKDSRWLCSRS   83 (265)
Q Consensus         4 ~~~~~~pd~vv~~GD~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~p~~~i~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~   83 (265)
                      .+++.+||+||++||++. .+..   ..++....+.+-.....++|+++++||||.                        
T Consensus        30 ~~~~~~~d~iv~~GDl~~-~~~~---~~~~~~~~~~~~~l~~~~~p~~~~~GNHD~------------------------   81 (214)
T cd07399          30 NAEALNIAFVLHLGDIVD-DGDN---DAEWEAADKAFARLDKAGIPYSVLAGNHDL------------------------   81 (214)
T ss_pred             HHHHcCCCEEEECCCccC-CCCC---HHHHHHHHHHHHHHHHcCCcEEEECCCCcc------------------------
Confidence            345578999999999994 3321   123332221111111245899999999991                        


Q ss_pred             eEecCceEEEEEEeCccccccccCCCCCCCCCccccchhhhhHHHHHHHHHHHhhcCCCCeEEEEeccccccCCCCCCh-
Q 024595           84 FILDAEIAEFVFVDTTPFVDEYFEDPGDSTYDWRGVYRRKEYLSDLLKDVDGALKNSKAKWKIVVGHHTIKSAGHHGVT-  162 (265)
Q Consensus        84 y~~~~~~~~~i~lds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~~wl~~~l~~~~~~~~iv~~H~P~~~~~~~~~~-  162 (265)
                               ++.+|+..                         .++|++||++.|++.+.+++||++|+|+......... 
T Consensus        82 ---------~~~ld~~~-------------------------~~~ql~WL~~~L~~~~~~~~iv~~H~p~~~~~~~~~~~  127 (214)
T cd07399          82 ---------VLALEFGP-------------------------RDEVLQWANEVLKKHPDRPAILTTHAYLNCDDSRPDSI  127 (214)
T ss_pred             ---------hhhCCCCC-------------------------CHHHHHHHHHHHHHCCCCCEEEEecccccCCCCcCccc
Confidence                     11222211                         2488999999999987889999999998865432111 


Q ss_pred             ------HHHHHHHHHHHHhC-CccEEEeCCcccceEEee
Q 024595          163 ------KELLLRLLPILEEN-NVDMYVNGHDHCLQHISS  194 (265)
Q Consensus       163 ------~~~~~~l~~~~~~~-~v~~vl~GH~H~~~~~~~  194 (265)
                            ....+.|.++++++ +|.+||+||.|.......
T Consensus       128 ~~~~~~~~~~~~~~~ll~~~~~V~~v~~GH~H~~~~~~~  166 (214)
T cd07399         128 DYDSDVNDGQQIWDKLVKKNDNVFMVLSGHVHGAGRTTL  166 (214)
T ss_pred             ccccccccHHHHHHHHHhCCCCEEEEEccccCCCceEEE
Confidence                  12235678999988 799999999999876655

YvnB (BSU35040) is an uncharacterized Bacillus subtilis protein with a metallophosphatase domain. This family includes bacterial and eukaryotic proteins similar to YvnB. YvnB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for

>cd08163 MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain

Probab=99.81  E-value=1.8e-19  Score=146.74  Aligned_cols=171  Identities=20%  Similarity=0.202  Sum_probs=104.0

Q ss_pred             cccccCCCEEEecCCccCCCCCCCCCChhhhh---hcccccCCCCCCCceEEcCCCcccCCCccccccccccccCCCcee
Q 024595            4 IGEKLEIDFVISTGDNFYEDGLTGEEDPAFLD---SFTSIYTAPSLQKQWYNVLGNHDYRGDVEAQLSPVLTRKDSRWLC   80 (265)
Q Consensus         4 ~~~~~~pd~vv~~GD~~~~~g~~~~~~~~~~~---~~~~~~~~~~l~~p~~~i~GNHD~~~~~~~~~~~~~~~~~~~~~~   80 (265)
                      +.+..+||+||++||++. .|.. ..+.+|.+   .|..++......+|++.||||||+.......... ...+.. +..
T Consensus        40 ~~~~l~PD~vv~lGDL~d-~G~~-~~~~~~~~~~~rf~~i~~~~~~~~pv~~VpGNHDig~~~~~~~~~-~~rf~~-~Fg  115 (257)
T cd08163          40 MQKQLKPDSTIFLGDLFD-GGRD-WADEYWKKEYNRFMRIFDPSPGRKMVESLPGNHDIGFGNGVVLPV-RQRFEK-YFG  115 (257)
T ss_pred             HHHhcCCCEEEEeccccc-CCee-CcHHHHHHHHHHHHHHhcCCCccceEEEeCCCcccCCCCCCCHHH-HHHHHH-HhC
Confidence            345679999999999993 4422 12244543   3344443222247999999999985321111000 011101 112


Q ss_pred             eeeeEecCceEEEEEEeCccccccccCCCCCCCCCccccchhhhhHHHHHHHHHHHhhcC-CCCeEEEEeccccccCCC-
Q 024595           81 SRSFILDAEIAEFVFVDTTPFVDEYFEDPGDSTYDWRGVYRRKEYLSDLLKDVDGALKNS-KAKWKIVVGHHTIKSAGH-  158 (265)
Q Consensus        81 ~~~y~~~~~~~~~i~lds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~~wl~~~l~~~-~~~~~iv~~H~P~~~~~~-  158 (265)
                      +..+.+..++++||+|||......                ....+..+|++||++.++.. ..+++||++|+|++.... 
T Consensus       116 ~~~~~~~~~~~~fV~Lds~~l~~~----------------~~~~~~~~~~~~l~~~l~~~~~~~p~ILl~H~Plyr~~~~  179 (257)
T cd08163         116 PTSRVIDVGNHTFVILDTISLSNK----------------DDPDVYQPPREFLHSFSAMKVKSKPRILLTHVPLYRPPNT  179 (257)
T ss_pred             CCceEEEECCEEEEEEccccccCC----------------cccccchhHHHHHHhhhhccCCCCcEEEEeccccccCCCC
Confidence            234677788999999999753210                01234568899999998874 567899999999985421 


Q ss_pred             -------C--------CChHH--H-HHHHHHHHHhCCccEEEeCCcccceEEee
Q 024595          159 -------H--------GVTKE--L-LLRLLPILEENNVDMYVNGHDHCLQHISS  194 (265)
Q Consensus       159 -------~--------~~~~~--~-~~~l~~~~~~~~v~~vl~GH~H~~~~~~~  194 (265)
                             .        |...+  + .+.-..+++..++.+||+||+|.+.....
T Consensus       180 ~cg~~re~~~~~~~~~g~~yq~~l~~~~s~~il~~~~P~~vfsGhdH~~C~~~h  233 (257)
T cd08163         180 SCGPLRESKTPLPYGYGYQYQNLLEPSLSEVILKAVQPVIAFSGDDHDYCEVVH  233 (257)
T ss_pred             CCCCccccCCCCCCCCCccceeecCHHHHHHHHHhhCCcEEEecCCCccceeEc
Confidence                   0        00000  0 12223566666899999999999987655

Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. Cdc1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site

>cd00842 MPP_ASMase acid sphingomyelinase and related proteins, metallophosphatase domain

Probab=99.80  E-value=4e-19  Score=148.93  Aligned_cols=174  Identities=14%  Similarity=0.116  Sum_probs=104.7

Q ss_pred             CCCEEEecCCccCCCCCCCCCChh----hhhhcccccCCCCCCCceEEcCCCcccCCCccccc----cccccccCC----
Q 024595            9 EIDFVISTGDNFYEDGLTGEEDPA----FLDSFTSIYTAPSLQKQWYNVLGNHDYRGDVEAQL----SPVLTRKDS----   76 (265)
Q Consensus         9 ~pd~vv~~GD~~~~~g~~~~~~~~----~~~~~~~~~~~~~l~~p~~~i~GNHD~~~~~~~~~----~~~~~~~~~----   76 (265)
                      +|||||++||++............    +...+.. +.....++|+++++||||.........    ...+.....    
T Consensus        68 ~~dfii~tGD~v~h~~~~~~~~~~~~~~~~~~~~~-l~~~~~~~pv~~~~GNHD~~p~~~~~~~~~~~~~~~~~~~~w~~  146 (296)
T cd00842          68 KPDFILWTGDLVRHDVDEQTPETLVLISISNLTSL-LKKAFPDTPVYPALGNHDSYPVNQFPPNNSPSWLYDALAELWKS  146 (296)
T ss_pred             CCCEEEEcCCCCCCCchhhchhHHHHHHHHHHHHH-HHHhCCCCCEEEcCCCCCCCcccccCCcccccHHHHHHHHHHHh
Confidence            899999999999433211111000    1111111 111224689999999999875311100    000111111    


Q ss_pred             --------CceeeeeeEec-CceEEEEEEeCccccccccCCCCCCCCCccccchhhhhHHHHHHHHHHHhhcC--CCCeE
Q 024595           77 --------RWLCSRSFILD-AEIAEFVFVDTTPFVDEYFEDPGDSTYDWRGVYRRKEYLSDLLKDVDGALKNS--KAKWK  145 (265)
Q Consensus        77 --------~~~~~~~y~~~-~~~~~~i~lds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~~wl~~~l~~~--~~~~~  145 (265)
                              .+....+|++. .+++++|+|||..+....       .+.. +  .......+|++||+++|+++  +.+.+
T Consensus       147 ~l~~~~~~~~~~ggYY~~~~~~~l~vI~Lnt~~~~~~~-------~~~~-~--~~~~~~~~Ql~WL~~~L~~a~~~~~~v  216 (296)
T cd00842         147 WLPEEAEETFKKGGYYSVPVKPGLRVISLNTNLYYKKN-------FWLL-G--SNETDPAGQLQWLEDELQEAEQAGEKV  216 (296)
T ss_pred             hcCHHHHHHhhcceEEEEEcCCCeEEEEEeCccccccC-------hhhh-c--cCCCCHHHHHHHHHHHHHHHHHCCCeE
Confidence                    11123456655 789999999999764211       0000 0  01122468999999999985  34578


Q ss_pred             EEEeccccccCCCCCChHHHHHHHHHHHHhCC--ccEEEeCCcccceEEee
Q 024595          146 IVVGHHTIKSAGHHGVTKELLLRLLPILEENN--VDMYVNGHDHCLQHISS  194 (265)
Q Consensus       146 iv~~H~P~~~~~~~~~~~~~~~~l~~~~~~~~--v~~vl~GH~H~~~~~~~  194 (265)
                      +|++|+|+........ ....+++.++++++.  |.++|+||+|.......
T Consensus       217 ~I~~HiPp~~~~~~~~-~~~~~~~~~ii~~y~~~i~~~~~GH~H~d~~~~~  266 (296)
T cd00842         217 WIIGHIPPGVNSYDTL-ENWSERYLQIINRYSDTIAGQFFGHTHRDEFRVF  266 (296)
T ss_pred             EEEeccCCCCcccccc-hHHHHHHHHHHHHHHHhhheeeecccccceEEEE
Confidence            8999999876543221 344678899999986  78999999999876554

Acid sphingomyelinase (ASMase) is a ubiquitously expressed phosphodiesterase which hydrolyzes sphingomyelin in acid pH conditions to form ceramide, a bioactive second messenger, as part of the sphingomyelin signaling pathway. ASMase is localized at the noncytosolic leaflet of biomembranes (for example the luminal leaflet of endosomes, lysosomes and phagosomes, and the extracellular leaflet of plasma membranes). ASMase-deficient humans develop Niemann-Pick disease. This disease is characterized by lysosomal storage of sphingomyelin in all tissues. Although ASMase-deficient mice are resistant to stress-induced apoptosis, they have greater susceptibility to bacterial infection. The latter correlates with defective phagolysosomal fusion and antibacterial killing activity in ASMase-deficient macrophages. ASMase belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but

>TIGR03729 acc_ester putative phosphoesterase

Probab=99.77  E-value=2.8e-18  Score=139.33  Aligned_cols=184  Identities=16%  Similarity=0.081  Sum_probs=108.0

Q ss_pred             ccccCCCEEEecCCccCCCCCCCCCChhhhhhcccccCCCCCCCceEEcCCCcccCCCc-cccccccccccCCCceeeee
Q 024595            5 GEKLEIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQKQWYNVLGNHDYRGDV-EAQLSPVLTRKDSRWLCSRS   83 (265)
Q Consensus         5 ~~~~~pd~vv~~GD~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~p~~~i~GNHD~~~~~-~~~~~~~~~~~~~~~~~~~~   83 (265)
                      +.+.+||+||++||++.. .      .+..+.++.+..  ...+|+++++||||+.... ...+....   ...+.....
T Consensus        28 ~~~~~~d~vv~~GDl~~~-~------~~~~~~~~~l~~--~~~~pv~~v~GNHD~~~~~~~~~~~~~~---~~~~l~~~~   95 (239)
T TIGR03729        28 LKKQKIDHLHIAGDISND-F------QRSLPFIEKLQE--LKGIKVTFNAGNHDMLKDLTYEEIESND---SPLYLHNRF   95 (239)
T ss_pred             HHhcCCCEEEECCccccc-h------hhHHHHHHHHHH--hcCCcEEEECCCCCCCCCCCHHHHHhcc---chhhhcccc
Confidence            345689999999999932 1      111122222211  1358999999999986321 11111000   111222233


Q ss_pred             eEecCceEEEEEEeCccccccccCCCC-------------CCCCCccccchhhhhHHHHHHHHHHHhhcCCCCeEEEEec
Q 024595           84 FILDAEIAEFVFVDTTPFVDEYFEDPG-------------DSTYDWRGVYRRKEYLSDLLKDVDGALKNSKAKWKIVVGH  150 (265)
Q Consensus        84 y~~~~~~~~~i~lds~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~Q~~wl~~~l~~~~~~~~iv~~H  150 (265)
                      ..+..++++|++++...-.. +.....             .+... . ......+.++|++||++.|++...+++||++|
T Consensus        96 ~~~~~~~~~~ig~~gw~d~~-~~~~~~~~~~~~~~~d~~~~~~~~-~-~~~~~~~~~~~l~~l~~~l~~~~~~~~ivvtH  172 (239)
T TIGR03729        96 IDIPNTQWRIIGNNGWYDYS-FSNDKTSKEILRWKKSFWFDRRIK-R-PMSDPERTAIVLKQLKKQLNQLDNKQVIFVTH  172 (239)
T ss_pred             cccCCCceEEEeeccceecc-cccccCHHHHHHhhhcEEeecccC-C-CCChHHHHHHHHHHHHHHHHhcCCCCEEEEEc
Confidence            33445779999988532110 000000             00000 0 01234577899999999999877788999999


Q ss_pred             cccccCCC------CCCh--HHH--HHHHHHHHHhCCccEEEeCCcccceE-EeeCCeEEEEeC
Q 024595          151 HTIKSAGH------HGVT--KEL--LLRLLPILEENNVDMYVNGHDHCLQH-ISSNGIEFLTSG  203 (265)
Q Consensus       151 ~P~~~~~~------~~~~--~~~--~~~l~~~~~~~~v~~vl~GH~H~~~~-~~~~~~~~i~~g  203 (265)
                      ||+.....      ....  ...  ...|.+++++++++++++||+|.... ...+++.++++.
T Consensus       173 ~pP~~~~~~~~~~~~~~~~~~~~~~s~~l~~li~~~~v~~~i~GH~H~~~~~~~i~~~~~~~~~  236 (239)
T TIGR03729       173 FVPHRDFIYVPMDHRRFDMFNAFLGSQHFGQLLVKYEIKDVIFGHLHRRFGPLTIGGTTYHNRP  236 (239)
T ss_pred             ccchHHHhcCCCCCcchhhhhhccChHHHHHHHHHhCCCEEEECCccCCCCCEEECCEEEEecC
Confidence            99865211      1111  011  25688889989999999999999974 444899988653

Members of this protein family belong to the larger family pfam00149 (calcineurin-like phosphoesterase), a family largely defined by small motifs of metal-chelating residues. The subfamily in this model shows a good but imperfect co-occurrence in species with domain TIGR03715 that defines a novel class of signal peptide typical of the accessory secretory system.

>cd07393 MPP_DR1119 Deinococcus radiodurans DR1119 and related proteins, metallophosphatase domain

Probab=99.77  E-value=2.4e-18  Score=138.85  Aligned_cols=181  Identities=19%  Similarity=0.132  Sum_probs=104.8

Q ss_pred             CCCEEEecCCccCCCCCCCCCChhhhhhcccccCCCCCCCceEEcCCCcccCCCccccccccccccCCCceeeeeeEecC
Q 024595            9 EIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQKQWYNVLGNHDYRGDVEAQLSPVLTRKDSRWLCSRSFILDA   88 (265)
Q Consensus         9 ~pd~vv~~GD~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~p~~~i~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~   88 (265)
                      +||+||++||++. .+.    ..+.......+   ..+..|+++|+||||++......+...+.+.  .+.......+..
T Consensus        41 ~~D~viiaGDl~~-~~~----~~~~~~~l~~l---~~l~~~v~~V~GNHD~~~~~~~~~~~~l~~~--~~~~~~n~~~~~  110 (232)
T cd07393          41 PEDIVLIPGDISW-AMK----LEEAKLDLAWI---DALPGTKVLLKGNHDYWWGSASKLRKALEES--RLALLFNNAYID  110 (232)
T ss_pred             CCCEEEEcCCCcc-CCC----hHHHHHHHHHH---HhCCCCeEEEeCCccccCCCHHHHHHHHHhc--CeEEeccCcEEE
Confidence            8999999999983 221    01222221211   1234589999999998432111111111111  111111122333


Q ss_pred             ceEEEEEEeCccccccccCCCCCCCCCccccchhhhhHHHHHHHHHHHhhcCCC----CeEEEEeccccccCCCCCChHH
Q 024595           89 EIAEFVFVDTTPFVDEYFEDPGDSTYDWRGVYRRKEYLSDLLKDVDGALKNSKA----KWKIVVGHHTIKSAGHHGVTKE  164 (265)
Q Consensus        89 ~~~~~i~lds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~~wl~~~l~~~~~----~~~iv~~H~P~~~~~~~~~~~~  164 (265)
                      +++.|++++...+....+.+.+.+..    ....+.+..+|+.||++.|++...    +++|+++|+|++.....     
T Consensus       111 ~~i~i~G~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~l~~l~~~L~~~~~~~~~~~~i~~~H~p~~~~~~~-----  181 (232)
T cd07393         111 DDVAICGTRGWDNPGNPWPPINETLK----VEEDEKIFERELERLELSLKAAKKREKEKIKIVMLHYPPANENGD-----  181 (232)
T ss_pred             CCEEEEEEEeeCCCCCcccccccccc----chhHHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCcCCCCC-----
Confidence            56888887643321100000000000    011245567899999999987422    36899999998765421     


Q ss_pred             HHHHHHHHHHhCCccEEEeCCcccceEEe-----eCCeEEEEeCCCCCCC
Q 024595          165 LLLRLLPILEENNVDMYVNGHDHCLQHIS-----SNGIEFLTSGGGSKAW  209 (265)
Q Consensus       165 ~~~~l~~~~~~~~v~~vl~GH~H~~~~~~-----~~~~~~i~~g~~~~~~  209 (265)
                       .+.+..++++++++++++||+|......     .+|+.|+++++++..+
T Consensus       182 -~~~~~~~~~~~~v~~vl~GH~H~~~~~~~~~~~~~gi~~~~~~~~~~~~  230 (232)
T cd07393         182 -DSPISKLIEEYGVDICVYGHLHGVGRDRAINGERGGIRYQLVSADYLNF  230 (232)
T ss_pred             -HHHHHHHHHHcCCCEEEECCCCCCcccccccceECCEEEEEEcchhcCc
Confidence             2356778888899999999999987644     5899999988887554

DR1119 is an uncharacterized Deinococcus radiodurans protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordinat

>TIGR03767 P_acnes_RR metallophosphoesterase, PPA1498 family

Probab=99.77  E-value=2.2e-17  Score=141.77  Aligned_cols=97  Identities=25%  Similarity=0.245  Sum_probs=73.4

Q ss_pred             eeeEec-CceEEEEEEeCccccccccCCCCCCCCCccccchhhhhHHHHHHHHHHHhhcCCCCeEEEEeccccccCCCC-
Q 024595           82 RSFILD-AEIAEFVFVDTTPFVDEYFEDPGDSTYDWRGVYRRKEYLSDLLKDVDGALKNSKAKWKIVVGHHTIKSAGHH-  159 (265)
Q Consensus        82 ~~y~~~-~~~~~~i~lds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~~wl~~~l~~~~~~~~iv~~H~P~~~~~~~-  159 (265)
                      .+|+|+ .++++||+|||.....           .+     .+.+.++|++||+++|+.++.+++||++|||++..... 
T Consensus       292 ~YYSFd~~ggvrfIvLDSt~~~G-----------~~-----~G~L~eeQL~WLeqeLa~a~~k~VVVf~HHPp~s~g~~~  355 (496)
T TIGR03767       292 GYYTFDIAGGVRGISMDTTNRAG-----------GD-----EGSLGQTQFKWIKDTLRASSDTLFVLFSHHTSWSMVNEL  355 (496)
T ss_pred             ceEEEEeECCEEEEEEeCCCcCC-----------Cc-----CCccCHHHHHHHHHHHhcCCCCCEEEEECCCCccccccc
Confidence            367888 7899999999985311           01     12456899999999999987889999999998764321 


Q ss_pred             ------CChHHHHHHHHHHHHhC-CccEEEeCCcccceEEee
Q 024595          160 ------GVTKELLLRLLPILEEN-NVDMYVNGHDHCLQHISS  194 (265)
Q Consensus       160 ------~~~~~~~~~l~~~~~~~-~v~~vl~GH~H~~~~~~~  194 (265)
                            +......++|.++++++ +|.++||||.|.......
T Consensus       356 ~Dp~~pg~~~~n~~eLldLL~~ypnV~aVfsGHvH~n~i~~~  397 (496)
T TIGR03767       356 TDPVDPGEKRHLGTELVSLLLEHPNVLAWVNGHTHSNKITAH  397 (496)
T ss_pred             cccccccccccCHHHHHHHHhcCCCceEEEECCcCCCccccc
Confidence                  11112246899999998 899999999999875543

This model describes a small collection of probable metallophosphoresterases, related to pfam00149 but with long inserts separating some of the shared motifs such that the homology is apparent only through multiple sequence alignment. Members of this protein family, in general, have a Sec-independent TAT (twin-arginine translocation) signal sequence, N-terminal to the region modeled by this alignment. Members include YP_056203.1 from Propionibacterium acnes KPA171202.

>cd07392 MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and related proteins, metallophosphatase domain

Probab=99.74  E-value=1.8e-17  Score=129.74  Aligned_cols=165  Identities=18%  Similarity=0.075  Sum_probs=97.8

Q ss_pred             ccccCCCEEEecCCccCCCCCCCCCChhhhhhcccccCCCCCCCceEEcCCCcccCCCccccccccccccCCCceeeeee
Q 024595            5 GEKLEIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQKQWYNVLGNHDYRGDVEAQLSPVLTRKDSRWLCSRSF   84 (265)
Q Consensus         5 ~~~~~pd~vv~~GD~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~p~~~i~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~y   84 (265)
                      +++.+||+||++||++. .+..    ... ..++. +  ..+++|+++|+||||....... ...   .  ..+..... 
T Consensus        19 ~~~~~~D~vv~~GDl~~-~~~~----~~~-~~~~~-l--~~~~~p~~~v~GNHD~~~~~~~-~~~---~--~~~~~~~~-   82 (188)
T cd07392          19 LKAEEADAVIVAGDITN-FGGK----EAA-VEINL-L--LAIGVPVLAVPGNCDTPEILGL-LTS---A--GLNLHGKV-   82 (188)
T ss_pred             hhccCCCEEEECCCccC-cCCH----HHH-HHHHH-H--HhcCCCEEEEcCCCCCHHHHHh-hhc---C--cEecCCCE-
Confidence            34578999999999984 3311    111 11221 1  2457899999999997542111 100   0  00111112 


Q ss_pred             EecCceEEEEEEeCccccccccCCCCCCCCCccccchhhhhHHHHHHHHHHHhhcCCCCeEEEEeccccccC-C-CCCCh
Q 024595           85 ILDAEIAEFVFVDTTPFVDEYFEDPGDSTYDWRGVYRRKEYLSDLLKDVDGALKNSKAKWKIVVGHHTIKSA-G-HHGVT  162 (265)
Q Consensus        85 ~~~~~~~~~i~lds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~~wl~~~l~~~~~~~~iv~~H~P~~~~-~-~~~~~  162 (265)
                       +..++++|+++++.....            +.   ....+.++|+.|+ +.+.....++.|+++|+|+... . .....
T Consensus        83 -~~~~~~~~~g~~~~~~~~------------~~---~~~~~~~~~l~~~-~~l~~~~~~~~ilv~H~pp~~~~~d~~~~~  145 (188)
T cd07392          83 -VEVGGYTFVGIGGSNPTP------------FN---TPIELSEEEIVSD-GRLNNLLAKNLILVTHAPPYGTAVDRVSGG  145 (188)
T ss_pred             -EEECCEEEEEeCCCCCCC------------CC---CccccCHHHHHHh-hhhhccCCCCeEEEECCCCcCCcccccCCC
Confidence             223568999998753110            00   0123456789998 5555566778999999999763 1 11100


Q ss_pred             -HHHHHHHHHHHHhCCccEEEeCCcccceEE-eeCCeEEEEe
Q 024595          163 -KELLLRLLPILEENNVDMYVNGHDHCLQHI-SSNGIEFLTS  202 (265)
Q Consensus       163 -~~~~~~l~~~~~~~~v~~vl~GH~H~~~~~-~~~~~~~i~~  202 (265)
                       ..-...+..+++++++++++|||+|..... ..+++.++..
T Consensus       146 ~~~g~~~l~~li~~~~~~~~l~GH~H~~~~~~~~~~~~~~n~  187 (188)
T cd07392         146 FHVGSKAIRKFIEERQPLLCICGHIHESRGVDKIGNTLVVNP  187 (188)
T ss_pred             CccCCHHHHHHHHHhCCcEEEEeccccccceeeeCCeEEecC
Confidence             011356788888899999999999998643 3466666543

PAE1087 is an uncharacterized Pyrobaculum aerophilum protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordina

>PF09423 PhoD: PhoD-like phosphatase; InterPro: IPR018946 This entry contains a number of putative proteins as well as Alkaline phosphatase D which catalyses the reaction: A phosphate monoester + H(2)O = an alcohol + phosphate ; PDB: 2YEQ_B

Probab=99.71  E-value=4.8e-17  Score=143.87  Aligned_cols=239  Identities=18%  Similarity=0.194  Sum_probs=113.7

Q ss_pred             cccccCCCEEEecCCccCCCCC---CC---------------CCC-hhhhhhcccccCCCCC-----CCceEEcCCCccc
Q 024595            4 IGEKLEIDFVISTGDNFYEDGL---TG---------------EED-PAFLDSFTSIYTAPSL-----QKQWYNVLGNHDY   59 (265)
Q Consensus         4 ~~~~~~pd~vv~~GD~~~~~g~---~~---------------~~~-~~~~~~~~~~~~~~~l-----~~p~~~i~GNHD~   59 (265)
                      ++++.+|||+|++||.||.++.   ..               ... ..++..|......+.+     .+|+++|+.+||+
T Consensus       127 ~a~~~~~D~~l~lGD~IY~d~~~~~~~~~~~~~~r~~~p~~~~~~l~~yR~~y~~~~~~p~l~~~~~~~P~~~iwDDHdi  206 (453)
T PF09423_consen  127 IAERDDPDFVLHLGDQIYEDGGGGYGNLSRRPIGRAPEPAHEAETLDDYRRRYRQYRSDPDLRRLHANVPWIMIWDDHDI  206 (453)
T ss_dssp             HTT-S--SEEEE-S-SS----TTSS--TT---S-----SSSS--SHHHHHHHHHHHHT-HHHHHHHHHSEEEE---STTT
T ss_pred             hhccCCCcEEEEeCCeeeccCCcccccccccccccccccccccccHHHHHHHHHHHcCCHHHHHHhhcccEEEEccCcee
Confidence            4554799999999999998852   00               001 2333333322222222     6899999999999


Q ss_pred             CCCcccccc-------c------------cccccCCCc------eeeeeeEecCce-EEEEEEeCccccccccCCCCCCC
Q 024595           60 RGDVEAQLS-------P------------VLTRKDSRW------LCSRSFILDAEI-AEFVFVDTTPFVDEYFEDPGDST  113 (265)
Q Consensus        60 ~~~~~~~~~-------~------------~~~~~~~~~------~~~~~y~~~~~~-~~~i~lds~~~~~~~~~~~~~~~  113 (265)
                      .+|......       .            ++.....+-      ....++.+.+|+ +.|++||++.+........  ..
T Consensus       207 ~nn~~~~~~~~~~~~~~~~~~~~~~a~~ay~e~~p~r~~~~~~~~~~~y~~~~~G~~~~~~~LD~R~~R~~~~~~~--~~  284 (453)
T PF09423_consen  207 GNNWWGDGAENHQDTSGDFQDRRRAAYQAYFEYQPVRNPDPPGDQGRIYRSFRYGDLVEFFMLDTRSYRSPPPCDG--PG  284 (453)
T ss_dssp             STT-BTTB-STT---HHHHHHHHHHHHHHHHHHS---GGG-BTTB----EEEEETTTEEEEE--SSSS----CCCS--SE
T ss_pred             cccccCCccccccccccchHHHHHHHHHHHHhhcCccCCCccCCCCceEEEEecCCceeEEEEechhccccccccc--cc
Confidence            765331100       0            000000000      001234577777 9999999999865211100  00


Q ss_pred             CCc--cccchhhhhHHHHHHHHHHHhhcCCCCeEEEEeccccccCCCC-------------CChHHHHHHHHHHHHhCCc
Q 024595          114 YDW--RGVYRRKEYLSDLLKDVDGALKNSKAKWKIVVGHHTIKSAGHH-------------GVTKELLLRLLPILEENNV  178 (265)
Q Consensus       114 ~~~--~~~~~~~~~~~~Q~~wl~~~l~~~~~~~~iv~~H~P~~~~~~~-------------~~~~~~~~~l~~~~~~~~v  178 (265)
                      ..+  .+......++++|++||++.|.++.++|+||++-.|+......             ......+++|+++|++.++
T Consensus       285 ~~~~~~~~~~~~mLG~~Q~~wL~~~L~~s~a~~kvi~s~v~~~~~~~~~~~~~~~~~~d~W~g~~~er~~Ll~~l~~~~~  364 (453)
T PF09423_consen  285 DTCPAADDPSRTMLGEEQWDWLEDWLASSQATWKVIGSSVPFSPLNFPDAAEGLPFNMDSWDGYPAERQRLLDFLRESGI  364 (453)
T ss_dssp             E--HHHH-TT--SS-HHHHHHHHHHHHH--SSEEEEE-SS--S---SS-SS-S--EETTSGGGSHHHHHHHHHHHHHTT-
T ss_pred             cccccccCCccCcCCHHHHHHHHHHHhcCCCcEEEEEeCCceecccccccccccccCCCchhhCHHHHHHHHHHHHhhCC
Confidence            000  0113345788999999999999999999999998887543211             1123457889999988776


Q ss_pred             --cEEEeCCcccceEEee---C------C---eEEEEeCCCCCCCCCC-CCC-----C--CCccceeee-cCCCeEEEEE
Q 024595          179 --DMYVNGHDHCLQHISS---N------G---IEFLTSGGGSKAWRGD-RNW-----W--SPEELKLYY-DGQGFMSVKM  235 (265)
Q Consensus       179 --~~vl~GH~H~~~~~~~---~------~---~~~i~~g~~~~~~~~~-~~~-----~--~~~~~~~~~-~~~gy~~~~v  235 (265)
                        .++|+|+.|.......   .      +   +..+++++.+...... ...     .  ..+...|.. ..+||++|++
T Consensus       365 ~~vV~LSGDvH~~~~~~~~~~~~~~~~~~~~~~~Ef~~s~vts~~~~~~~~~~~~~~~~~~np~~~~~~~~~~G~~~i~~  444 (453)
T PF09423_consen  365 RNVVFLSGDVHASAASRIPPDDADPPDGPGSVGVEFTSSSVTSPGFGLGTSPALDRALDKANPHLKFADLRNFGYVEIDI  444 (453)
T ss_dssp             --EEEEE-SSSSEEEEEEESSTT---TTS-EEEEEEE---SSTT-S-BSB-TTHHH-HHHH-TTEEEEE-B-EEEEEEEE
T ss_pred             CCEEEEecCcchheeeecccccccccCCCCCeEEEEECCCccCCCcccccchhhhhhhhhcCCceEEeECCCCcEEEEEE
Confidence              4999999999987654   1      1   2334444443332210 000     0  012345544 6789999999


Q ss_pred             eCCeEEEEE
Q 024595          236 TRSEAVVLF  244 (265)
Q Consensus       236 ~~~~i~~~~  244 (265)
                      ++++++.++
T Consensus       445 ~~~~~~~~~  453 (453)
T PF09423_consen  445 TPERVTAEW  453 (453)
T ss_dssp             ETTEEEEEE
T ss_pred             ccceEEEEC
Confidence            999998875

>cd07383 MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase and related proteins, metallophosphatase domain

Probab=99.71  E-value=1.7e-17  Score=131.13  Aligned_cols=139  Identities=18%  Similarity=0.201  Sum_probs=85.7

Q ss_pred             ccccccCCCEEEecCCccCCCCCCCCCChhhhhhcccccCCCCCCCceEEcCCCcccCCCccccccccccccCCCceeee
Q 024595            3 LIGEKLEIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQKQWYNVLGNHDYRGDVEAQLSPVLTRKDSRWLCSR   82 (265)
Q Consensus         3 ~~~~~~~pd~vv~~GD~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~p~~~i~GNHD~~~~~~~~~~~~~~~~~~~~~~~~   82 (265)
                      ++++..+||+||++||+++...........+.+.++.+   ...++|+++++||||..+                     
T Consensus        35 ~~~~~~~~d~vv~~GDl~~~~~~~~~~~~~~~~~~~~l---~~~~~p~~~~~GNHD~~g---------------------   90 (199)
T cd07383          35 RVLDAEKPDLVVLTGDLITGENTNDNSTSALDKAVSPM---IDRKIPWAATFGNHDGYD---------------------   90 (199)
T ss_pred             HHHhhcCCCEEEECCccccCCCCchHHHHHHHHHHHHH---HHcCCCEEEECccCCCCC---------------------
Confidence            34566799999999999964332110012222222222   124799999999999000                     


Q ss_pred             eeEecCceEEEEEEeCccccccccCCCCCCCCCccccchhhhhHHHHHHHHHHHhhcC-----CCCeEEEEeccccccCC
Q 024595           83 SFILDAEIAEFVFVDTTPFVDEYFEDPGDSTYDWRGVYRRKEYLSDLLKDVDGALKNS-----KAKWKIVVGHHTIKSAG  157 (265)
Q Consensus        83 ~y~~~~~~~~~i~lds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~~wl~~~l~~~-----~~~~~iv~~H~P~~~~~  157 (265)
                                                               .+.++|++||++.+.+.     ...+.++++|||+....
T Consensus        91 -----------------------------------------~l~~~ql~wL~~~l~~~~~~~~~~~~~l~f~H~P~~~~~  129 (199)
T cd07383          91 -----------------------------------------WIRPSQIEWFKETSAALKKKYGKPIPSLAFFHIPLPEYR  129 (199)
T ss_pred             -----------------------------------------CCCHHHHHHHHHHHHHHhhccCCCCcceEEEecChHHHH
Confidence                                                     01247899999999884     44689999999987542


Q ss_pred             C--------CCChH------HHHHHHHHHH-HhCCccEEEeCCcccceEEeeCCeEEEEeCCCC
Q 024595          158 H--------HGVTK------ELLLRLLPIL-EENNVDMYVNGHDHCLQHISSNGIEFLTSGGGS  206 (265)
Q Consensus       158 ~--------~~~~~------~~~~~l~~~~-~~~~v~~vl~GH~H~~~~~~~~~~~~i~~g~~~  206 (265)
                      .        .|...      .....++..+ +..+|+++++||+|.+......+...++.|+.+
T Consensus       130 ~~~~~~~~~~g~~~d~~~~~~~~~~~~~~~~~~~~v~~v~~GH~H~~~~~~~~~~i~l~~g~~~  193 (199)
T cd07383         130 EVWEGKGKVPGINNEKVCCPKINSGLFKALLERGDVKGVFCGHDHGNDFCGRYNGIWLCYGRGT  193 (199)
T ss_pred             hhhcccCCCCccCCcccCCCcCCcHHHHHHHHcCCeEEEEeCCCCCcceecccCCEEEeCCCCC
Confidence            1        11110      1123344444 557899999999999765554444455655543

DCR2 phosphatase (Dosage-dependent Cell Cycle Regulator 2) functions together with DCR1 (Gid8) in a common pathway to accelerate initiation of DNA replication in Saccharomyces cerevisiae. Genetic analysis suggests that DCR1 functions upstream of DCR2. DCR2 interacts with and dephosphorylates Sic1, an inhibitor of mitotic cyclin/cyclin-dependent kinase complexes, which may serve to trigger the initiation of cell division. DCR2 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAP

>cd07388 MPP_Tt1561 Thermus thermophilus Tt1561 and related proteins, metallophosphatase domain

Probab=99.65  E-value=4.5e-15  Score=117.96  Aligned_cols=183  Identities=11%  Similarity=0.021  Sum_probs=101.1

Q ss_pred             ccccCCCEEEecCCccCCCCCCCCCChhhhhhcccccCCCCCCCceEEcCCCcccCCCcccccccccccc--CCC-c-ee
Q 024595            5 GEKLEIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQKQWYNVLGNHDYRGDVEAQLSPVLTRK--DSR-W-LC   80 (265)
Q Consensus         5 ~~~~~pd~vv~~GD~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~p~~~i~GNHD~~~~~~~~~~~~~~~~--~~~-~-~~   80 (265)
                      +++.++|+||++||++. .+.   ...++...+..+   ..+..|+++++||||..  ....+...+...  .+. . ..
T Consensus        27 ~~~~~~D~vv~~GDl~~-~g~---~~~~~~~~l~~l---~~l~~pv~~V~GNhD~~--v~~~l~~~~~~~~~~p~~~~lh   97 (224)
T cd07388          27 APETGADAIVLIGNLLP-KAA---KSEDYAAFFRIL---GEAHLPTFYVPGPQDAP--LWEYLREAYNAELVHPEIRNVH   97 (224)
T ss_pred             HhhcCCCEEEECCCCCC-CCC---CHHHHHHHHHHH---HhcCCceEEEcCCCChH--HHHHHHHHhcccccCccceecC
Confidence            34568999999999994 221   001222222221   24568999999999964  111111001000  000 0 11


Q ss_pred             eeeeEecCceEEEEEEeCccccccccCCCCCCCCCccccchhhhhHHHHH----HHHHH----HhhcCCCCeEEEEeccc
Q 024595           81 SRSFILDAEIAEFVFVDTTPFVDEYFEDPGDSTYDWRGVYRRKEYLSDLL----KDVDG----ALKNSKAKWKIVVGHHT  152 (265)
Q Consensus        81 ~~~y~~~~~~~~~i~lds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~----~wl~~----~l~~~~~~~~iv~~H~P  152 (265)
                      .....+. +.++|++++.....          .         ..+.++|+    .|+.+    .+.+...++.|+++|+|
T Consensus        98 ~~~~~~~-g~~~~~GlGGs~~~----------~---------~e~sE~e~~~~~~~~~~~~l~~~~~~~~~~~VLv~H~P  157 (224)
T cd07388          98 ETFAFWR-GPYLVAGVGGEIAD----------E---------GEPEEHEALRYPAWVAEYRLKALWELKDYRKVFLFHTP  157 (224)
T ss_pred             CCeEEec-CCeEEEEecCCcCC----------C---------CCcCHHHHhhhhhhHHHHHHHHHHhCCCCCeEEEECCC
Confidence            1111222 56899999855311          0         11233442    45433    44444566889999999


Q ss_pred             cccCC-CCCChHHHHHHHHHHHHhCCccEEEeCCcccceEEeeCCeEEEEeCCCCCCCCCCCCCCCCccceeeecCCCeE
Q 024595          153 IKSAG-HHGVTKELLLRLLPILEENNVDMYVNGHDHCLQHISSNGIEFLTSGGGSKAWRGDRNWWSPEELKLYYDGQGFM  231 (265)
Q Consensus       153 ~~~~~-~~~~~~~~~~~l~~~~~~~~v~~vl~GH~H~~~~~~~~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~gy~  231 (265)
                      |+... .|..    ...+..++++++..+++|||.| ......+++..+..|.                    .....|+
T Consensus       158 P~g~g~~h~G----S~alr~~I~~~~P~l~i~GHih-~~~~~~g~t~vvNpg~--------------------~~~g~~a  212 (224)
T cd07388         158 PYHKGLNEQG----SHEVAHLIKTHNPLVVLVGGKG-QKHELLGASWVVVPGD--------------------LSEGRYA  212 (224)
T ss_pred             CCCCCCCccC----HHHHHHHHHHhCCCEEEEcCCc-eeEEEeCCEEEECCCc--------------------ccCCcEE
Confidence            98873 2322    2456779999999999999999 3323335555443221                    1234778


Q ss_pred             EEEEeCCeEE
Q 024595          232 SVKMTRSEAV  241 (265)
Q Consensus       232 ~~~v~~~~i~  241 (265)
                      ++++++.+++
T Consensus       213 ~i~~~~~~v~  222 (224)
T cd07388         213 LLDLRARKLE  222 (224)
T ss_pred             EEEecCccee
Confidence            9998765544

This family includes bacterial proteins related to Tt1561 (also known as Aq1956 in Aquifex aeolicus), an uncharacterized Thermus thermophilus protein. The conserved domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets,

>COG3540 PhoD Phosphodiesterase/alkaline phosphatase D [Inorganic ion transport and metabolism]

Probab=99.62  E-value=2.3e-15  Score=127.24  Aligned_cols=239  Identities=16%  Similarity=0.138  Sum_probs=137.4

Q ss_pred             ccccccCCCEEEecCCccCCCCCCCCC---------------------ChhhhhhcccccCCCC-----CCCceEEcCCC
Q 024595            3 LIGEKLEIDFVISTGDNFYEDGLTGEE---------------------DPAFLDSFTSIYTAPS-----LQKQWYNVLGN   56 (265)
Q Consensus         3 ~~~~~~~pd~vv~~GD~~~~~g~~~~~---------------------~~~~~~~~~~~~~~~~-----l~~p~~~i~GN   56 (265)
                      +.+++++||||||+||.||++|.....                     -.+++..+........     ...||++.|.+
T Consensus       162 ~~ma~~~~D~viH~GDyIYeyg~~~~~~~~~~~~~~~~~~~~~~ei~TLddYR~rya~y~~D~nLqaahA~~Pwi~~WDD  241 (522)
T COG3540         162 KTMAKEEPDFVIHLGDYIYEYGPIPDEVSLNSWKNVVVTQHKSKEIETLDDYRGRYAYYKTDENLQAAHAAFPWIVQWDD  241 (522)
T ss_pred             HHHHhcCCCEEEEcCCeeeccCCcccccccccccccccCCCCCcceeeHHHHhhHHhhhcccHHHHHhhccCCEEEEecc
Confidence            346778999999999999998743100                     0123333221111112     25899999999


Q ss_pred             cccCCCccccccc--------------------cccccCCCce-ee---e-eeEecCce-EEEEEEeCccccccccCCCC
Q 024595           57 HDYRGDVEAQLSP--------------------VLTRKDSRWL-CS---R-SFILDAEI-AEFVFVDTTPFVDEYFEDPG  110 (265)
Q Consensus        57 HD~~~~~~~~~~~--------------------~~~~~~~~~~-~~---~-~y~~~~~~-~~~i~lds~~~~~~~~~~~~  110 (265)
                      ||..+|.......                    +++.+--|.. .|   + +-.|.+|+ ..+++||++.|.....+.. 
T Consensus       242 HEv~NN~~~~~~~nD~~~~~k~~~~r~a~A~qAyyE~mPiR~~~~p~~~~lYR~~tyG~La~~~~LDtR~YR~dqp~~d-  320 (522)
T COG3540         242 HEVANNWSNSIDENDSRYDEKDFVLRAAAARQAYYEHMPIRYSSLPTDGRLYRSFTYGPLADLFVLDTRSYRTDQPCGD-  320 (522)
T ss_pred             ccccccccccccccCCCCChHHHHHHHHHHHHHHHHhCccccccCCccceeeeeeccccccceeeeehhhhccccccCC-
Confidence            9998763322111                    0000000000 01   1 22466665 7899999999873221111 


Q ss_pred             CCCCCc--cccchhhhhHHHHHHHHHHHhhcCCCCeEEEEeccccccCCC----------------CCChHHHHHHHHHH
Q 024595          111 DSTYDW--RGVYRRKEYLSDLLKDVDGALKNSKAKWKIVVGHHTIKSAGH----------------HGVTKELLLRLLPI  172 (265)
Q Consensus       111 ~~~~~~--~~~~~~~~~~~~Q~~wl~~~l~~~~~~~~iv~~H~P~~~~~~----------------~~~~~~~~~~l~~~  172 (265)
                      .....+  ........++++|.+||+..|..++++|+||....|+-....                .|.. .-+++|+.+
T Consensus       321 g~~~~~q~~~~~~~~mlG~~QeqWLk~~L~~SkatWnVia~q~~~~~~~~d~~~a~~~~~a~~D~wdGy~-~~RerLl~f  399 (522)
T COG3540         321 GNPPNCQAVAGSAATMLGEQQEQWLKRGLGASKATWNVIAQQMPLGLVVFDGSPATEGQEANADGWDGYP-AGRERLLRF  399 (522)
T ss_pred             CCcchhhhhhCccccchhhHHHHHHHhhhhhcchhhhhhhhhcceeEeecCCCccccCccccccCcCCCc-ccHHHHHHH
Confidence            111111  111234567899999999999999999999999888753321                2222 236799999


Q ss_pred             HHhCCcc--EEEeCCcccceEEee-----------CCeEEEEeCCCCCCCCC--CCCC----CCCccceeeecC-CCeEE
Q 024595          173 LEENNVD--MYVNGHDHCLQHISS-----------NGIEFLTSGGGSKAWRG--DRNW----WSPEELKLYYDG-QGFMS  232 (265)
Q Consensus       173 ~~~~~v~--~vl~GH~H~~~~~~~-----------~~~~~i~~g~~~~~~~~--~~~~----~~~~~~~~~~~~-~gy~~  232 (265)
                      ++..++.  +||+|..|.......           ..-.|+ +++.+....+  ....    -..+.++|.+.. .||.+
T Consensus       400 i~~~~~~N~V~LtgDvH~~wA~~l~~d~a~~~~~~~f~Efv-~tsi~sG~~gp~~~~~~~~l~~np~vkF~~a~~~g~~~  478 (522)
T COG3540         400 IADRKIRNTVVLTGDVHYSWAHDLDPDFAQFEDFAPFWEFV-STSINSGGFGPNDLPDMAILTFNPEVKFNNAPGRGYVL  478 (522)
T ss_pred             HHhcCCCCcEEEechhHHHHHhhcCcchhcccccCceeeEe-eccCcCCCcCCCcCchhhhhccCceEEeeccccccccc
Confidence            9988764  999999997653322           122333 3322222111  1110    012345666665 89999


Q ss_pred             EEEeCCeEEEEE
Q 024595          233 VKMTRSEAVVLF  244 (265)
Q Consensus       233 ~~v~~~~i~~~~  244 (265)
                      +.+...+..-++
T Consensus       479 ~~~~~~q~~~~~  490 (522)
T COG3540         479 CPVAGLQFFGEV  490 (522)
T ss_pred             CCcccceeEEEE
Confidence            998877665554

>PF00149 Metallophos: Calcineurin-like phosphoesterase; InterPro: IPR004843 This domain is found in a diverse range of phosphoesterases [], including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases, as well as nucleases such as bacterial SbcD or yeast MRE11

Probab=99.62  E-value=1.5e-16  Score=122.50  Aligned_cols=63  Identities=22%  Similarity=0.197  Sum_probs=48.0

Q ss_pred             HHHHHHHHHHhhcCCCCeEEEEeccccccCCCCCCh----HHHHHHHHHHHHhCCccEEEeCCcccc
Q 024595          127 SDLLKDVDGALKNSKAKWKIVVGHHTIKSAGHHGVT----KELLLRLLPILEENNVDMYVNGHDHCL  189 (265)
Q Consensus       127 ~~Q~~wl~~~l~~~~~~~~iv~~H~P~~~~~~~~~~----~~~~~~l~~~~~~~~v~~vl~GH~H~~  189 (265)
                      .+++.|+...+.....+++||++|+|+.........    ....+.+..++++++|+++|+||+|.+
T Consensus       134 ~~~~~~~~~~~~~~~~~~~iv~~H~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~GH~H~~  200 (200)
T PF00149_consen  134 QEWWLWLLLLLEAKNDDPVIVFTHHPPYSSSSDSSSYGNESKGREALEELLKKYNVDLVLSGHTHRY  200 (200)
T ss_dssp             HHHHHHHHHHHHEEEESEEEEEESSSSSTTSSSTHHHSSEEEHHHHHHHHHHHTTCSEEEEESSSSE
T ss_pred             hhcccccccccccccccceeEEEecCCCCccccccccchhhccHHHHHHHHhhCCCCEEEeCceecC
Confidence            455666666666667789999999999876543321    234567888999999999999999975

The most conserved regions in this domain centre around the metal chelating residues.; GO: 0016787 hydrolase activity; PDB: 2IAE_C 3DW8_F 3FGA_C 2IE4_C 2NYM_C 2NYL_C 3K7V_C 2NPP_C 2IE3_C 3K7W_C ....

>COG1409 Icc Predicted phosphohydrolases [General function prediction only]

Probab=99.61  E-value=2.3e-14  Score=120.04  Aligned_cols=167  Identities=21%  Similarity=0.175  Sum_probs=99.2

Q ss_pred             ccccCCCEEEecCCccCCCCCCCCCChhhhhhcccccCCCCCCCceEEcCCCcccCCCccccccccccccCCCceeeeee
Q 024595            5 GEKLEIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQKQWYNVLGNHDYRGDVEAQLSPVLTRKDSRWLCSRSF   84 (265)
Q Consensus         5 ~~~~~pd~vv~~GD~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~p~~~i~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~y   84 (265)
                      ++..+||+||++||++. .|..    .++.. +..++....+..|++++|||||.+......+...+.   .++.  ..-
T Consensus        29 i~~~~~D~~v~tGDl~~-~~~~----~~~~~-~~~~l~~~~~~~~~~~vpGNHD~~~~~~~~~~~~~~---~~~~--~~~   97 (301)
T COG1409          29 IEQLKPDLLVVTGDLTN-DGEP----EEYRR-LKELLARLELPAPVIVVPGNHDARVVNGEAFSDQFF---NRYA--VLV   97 (301)
T ss_pred             HhcCCCCEEEEccCcCC-CCCH----HHHHH-HHHHHhhccCCCceEeeCCCCcCCchHHHHhhhhhc---ccCc--ceE
Confidence            44578999999999994 4422    22222 222222235678999999999987643332221110   1110  001


Q ss_pred             EecC-ceEEEEEEeCccccccccCCCCCCCCCccccchhhhhHHHHHHHHHHHhhcCCCC---eEEEEeccccccCCCCC
Q 024595           85 ILDA-EIAEFVFVDTTPFVDEYFEDPGDSTYDWRGVYRRKEYLSDLLKDVDGALKNSKAK---WKIVVGHHTIKSAGHHG  160 (265)
Q Consensus        85 ~~~~-~~~~~i~lds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~~wl~~~l~~~~~~---~~iv~~H~P~~~~~~~~  160 (265)
                      .... +.++++.+|+.....                 +.+.+..+|+.||++.|+.....   .+++++|||+.......
T Consensus        98 ~~~~~~~~~~~~~d~~~~~~-----------------~~G~~~~~q~~~l~~~l~~~~~~~~~~~v~~~hh~~~~~~~~~  160 (301)
T COG1409          98 GACSSGGWRVIGLDSSVPGV-----------------PLGRLGAEQLDWLEEALAAAPERAKDTVVVLHHHPLPSPGTGV  160 (301)
T ss_pred             eeccCCceEEEEecCCCCCC-----------------CCCEECHHHHHHHHHHHHhCccccCceEEEecCCCCCCCCCcc
Confidence            1222 678999999987421                 12235679999999999986543   45566666655332211


Q ss_pred             C--hHHHHHHHHHHHHhCC--ccEEEeCCcccc--eEEeeCCeEE
Q 024595          161 V--TKELLLRLLPILEENN--VDMYVNGHDHCL--QHISSNGIEF  199 (265)
Q Consensus       161 ~--~~~~~~~l~~~~~~~~--v~~vl~GH~H~~--~~~~~~~~~~  199 (265)
                      .  .......+...+..++  ++++++||.|..  ......+...
T Consensus       161 ~~~~l~~~~~~~~~~~~~~~~v~~vl~GH~H~~~~~~~~~~~~~~  205 (301)
T COG1409         161 DRVALRDAGELLDVLIAHGNDVRLVLSGHIHLAAQTVYQLNGTRL  205 (301)
T ss_pred             ceeeeecchhHHHHHHhcCCceEEEEeCcccccccccceeCCeee
Confidence            1  1122345667777777  999999999998  5444444433

>KOG1432 consensus Predicted DNA repair exonuclease SIA1 [General function prediction only]

Probab=99.61  E-value=2.5e-14  Score=116.37  Aligned_cols=189  Identities=19%  Similarity=0.278  Sum_probs=105.9

Q ss_pred             cccccccCCCEEEecCCccCCCCCCCCCC-hhhhhhcccccCCCCCCCceEEcCCCcccCCCcc--------cccccccc
Q 024595            2 GLIGEKLEIDFVISTGDNFYEDGLTGEED-PAFLDSFTSIYTAPSLQKQWYNVLGNHDYRGDVE--------AQLSPVLT   72 (265)
Q Consensus         2 ~~~~~~~~pd~vv~~GD~~~~~g~~~~~~-~~~~~~~~~~~~~~~l~~p~~~i~GNHD~~~~~~--------~~~~~~~~   72 (265)
                      .++.+.++|||||++||+++.  ....+. .-+.+++..+   -..+|||.+++||||..+...        ..+.+.+.
T Consensus        93 ~rvL~sE~PDlVVfTGD~i~g--~~t~Da~~sl~kAvaP~---I~~~IPwA~~lGNHDdes~ltr~ql~~~i~~lP~s~~  167 (379)
T KOG1432|consen   93 SRVLASEKPDLVVFTGDNIFG--HSTQDAATSLMKAVAPA---IDRKIPWAAVLGNHDDESDLTRLQLMKFISKLPYSLS  167 (379)
T ss_pred             HHHHhccCCCEEEEeCCcccc--cccHhHHHHHHHHhhhH---hhcCCCeEEEecccccccccCHHHHHHHHhcCCCccc
Confidence            456778999999999999953  222111 1233333322   235899999999999876532        12222222


Q ss_pred             ccCC--Ccee---e-eeeE------e-----cCceEEEEEEeCccccccccCCCCCCCCCccccchhhhhHHHHHHHHHH
Q 024595           73 RKDS--RWLC---S-RSFI------L-----DAEIAEFVFVDTTPFVDEYFEDPGDSTYDWRGVYRRKEYLSDLLKDVDG  135 (265)
Q Consensus        73 ~~~~--~~~~---~-~~y~------~-----~~~~~~~i~lds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~~wl~~  135 (265)
                      +.++  .+..   . ..|.      +     ...-..+++||+..+...-         .+  ......+.+.|..||+.
T Consensus       168 ~v~p~dg~~~~~~g~gnyn~~i~~~~ds~~~~~sv~~lyfld~~~~~s~~---------~~--~~~Ydwik~sq~~wl~~  236 (379)
T KOG1432|consen  168 QVNPPDGHMYIIDGFGNYNLQIEGAIDSELENKSVFNLYFLDSSSYTSVP---------PL--LPGYDWIKESQLEWLSD  236 (379)
T ss_pred             cCCCcccceeeeecccceEEEeccCCCcccccCceeeEEEEecCCccccc---------cc--ccCccchhhhhHHHHhh
Confidence            2211  1110   0 0111      0     1123456778877653210         00  01122345789999998


Q ss_pred             Hh----hc-C--CCCeEEEEeccccccCCC-------CCCh------HHHHHHHHHHHH-hCCccEEEeCCcccceEEee
Q 024595          136 AL----KN-S--KAKWKIVVGHHTIKSAGH-------HGVT------KELLLRLLPILE-ENNVDMYVNGHDHCLQHISS  194 (265)
Q Consensus       136 ~l----~~-~--~~~~~iv~~H~P~~~~~~-------~~~~------~~~~~~l~~~~~-~~~v~~vl~GH~H~~~~~~~  194 (265)
                      ..    .. +  ++.+-+++.|.|+.....       -|..      ......++.+|. ..+|++|+|||.|....+..
T Consensus       237 ~~~~~~~~~~~~~P~p~La~~HIP~~E~~~~~~~tp~~g~~~E~~~~~~~~sg~~~~L~~r~~Vk~vf~GHdHvNDfC~~  316 (379)
T KOG1432|consen  237 TSKEFKEPNSKYNPQPGLAFFHIPLPEFLELESKTPLIGVFQEGVSASKHNSGFLTTLVNRGNVKGVFCGHDHVNDFCGE  316 (379)
T ss_pred             hhhhhhcccCccCCCCceEEEEcccHHHhhccCCCcccceeeccccccccccHHHHHHHhccCcceEEeccccccceecc
Confidence            87    22 1  233678999999853211       0110      011244666676 67999999999999987765


Q ss_pred             -CCeEEEEeCCCC
Q 024595          195 -NGIEFLTSGGGS  206 (265)
Q Consensus       195 -~~~~~i~~g~~~  206 (265)
                       .+..++|-|+|.
T Consensus       317 ~k~~~wlCygGga  329 (379)
T KOG1432|consen  317 LKGELWLCYGGGA  329 (379)
T ss_pred             cCCeEEEEecCCC
Confidence             554666666554

>cd07404 MPP_MS158 Microscilla MS158 and related proteins, metallophosphatase domain

Probab=99.58  E-value=1.1e-14  Score=111.63  Aligned_cols=60  Identities=18%  Similarity=0.341  Sum_probs=44.8

Q ss_pred             CeEEEEeccccccCCC-C----CC-hHHHHHHHHHHHHhCCccEEEeCCcccceEEeeCCeEEEEe
Q 024595          143 KWKIVVGHHTIKSAGH-H----GV-TKELLLRLLPILEENNVDMYVNGHDHCLQHISSNGIEFLTS  202 (265)
Q Consensus       143 ~~~iv~~H~P~~~~~~-~----~~-~~~~~~~l~~~~~~~~v~~vl~GH~H~~~~~~~~~~~~i~~  202 (265)
                      +++||++|||+..... .    +. .....+.+..++++.+|+++++||+|.......+++.++++
T Consensus        97 ~~~vv~~HhpP~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~i~GH~H~~~~~~~~g~~~~~n  162 (166)
T cd07404          97 GKTVVVTHHAPSPLSLAPQYGDSLVNAAFAVDLDDLILADPIDLWIHGHTHFNFDYRIGGTRVLSN  162 (166)
T ss_pred             CCEEEEeCCCCCccccCccccCCCcchhhhhccHhHHhhcCCCEEEECCccccceEEECCEEEEec
Confidence            5789999999987532 1    11 11334456777888899999999999998777788888764

MS158 is an uncharacterized Microscilla protein with a metallophosphatase domain. Microscilla proteins MS152, and MS153 are also included in this family. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is t

>cd00840 MPP_Mre11_N Mre11 nuclease, N-terminal metallophosphatase domain

Probab=99.55  E-value=2.7e-14  Score=114.75  Aligned_cols=169  Identities=18%  Similarity=0.153  Sum_probs=90.2

Q ss_pred             cccccCCCEEEecCCccCCCCCCCCCChhhhhhcccccC-CCCCCCceEEcCCCcccCCCccccccccccccCCCce---
Q 024595            4 IGEKLEIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYT-APSLQKQWYNVLGNHDYRGDVEAQLSPVLTRKDSRWL---   79 (265)
Q Consensus         4 ~~~~~~pd~vv~~GD~~~~~g~~~~~~~~~~~~~~~~~~-~~~l~~p~~~i~GNHD~~~~~~~~~~~~~~~~~~~~~---   79 (265)
                      .+.+.+||+||++||++.... .  ....+. .+...+. ....++|+++++||||...........  ... ..+.   
T Consensus        36 ~~~~~~~d~i~~~GD~~~~~~-~--~~~~~~-~~~~~~~~~~~~~~~v~~~~GNHD~~~~~~~~~~~--~~~-~~~~~~~  108 (223)
T cd00840          36 LAIEEKVDFVLIAGDLFDSNN-P--SPEALE-LLIEALRRLKEAGIPVFIIAGNHDSPSRLGALSPL--LAL-SGLHLVG  108 (223)
T ss_pred             HHHhcCCCEEEECCcccCCCC-C--CHHHHH-HHHHHHHHHHHCCCCEEEecCCCCCccccccccch--Hhh-CcEEEEc
Confidence            345679999999999984321 1  111111 1121111 111378999999999987643221111  000 0010   


Q ss_pred             ------eeeeeEecCceEEEEEEeCccccccccCCCCCCCCCccccchhhhhHHHHHHHHHHHhhc-CCCCeEEEEeccc
Q 024595           80 ------CSRSFILDAEIAEFVFVDTTPFVDEYFEDPGDSTYDWRGVYRRKEYLSDLLKDVDGALKN-SKAKWKIVVGHHT  152 (265)
Q Consensus        80 ------~~~~y~~~~~~~~~i~lds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~~wl~~~l~~-~~~~~~iv~~H~P  152 (265)
                            ......++..++.+++++....                      ....++.+++...+.. .+..+.|+++|+|
T Consensus       109 ~~~~~~~~~~~~~~~~~v~i~g~~~~~~----------------------~~~~~~~~~~~~~~~~~~~~~~~Il~~H~~  166 (223)
T cd00840         109 VEEDVLTPLLLPKGGTGVAIYGLPYLRR----------------------SRLRDLLADAELRPRPLDPDDFNILLLHGG  166 (223)
T ss_pred             ccCcceeEEEeccCCeEEEEEECCCCCH----------------------HHHHHHHHHHHHHhhccCCCCcEEEEEeee
Confidence                  0111223445577776654321                      1112334444444433 4667899999999


Q ss_pred             cccCCCCCChHHHHHHHHHHHHhCCccEEEeCCcccceEEeeCCeEEEEeC
Q 024595          153 IKSAGHHGVTKELLLRLLPILEENNVDMYVNGHDHCLQHISSNGIEFLTSG  203 (265)
Q Consensus       153 ~~~~~~~~~~~~~~~~l~~~~~~~~v~~vl~GH~H~~~~~~~~~~~~i~~g  203 (265)
                      +..........  .......+...+++++++||.|..+.....+...+.+|
T Consensus       167 ~~~~~~~~~~~--~~~~~~~~~~~~~d~v~~GH~H~~~~~~~~~~~~~ypG  215 (223)
T cd00840         167 VAGAGPSDSER--APFVPEALLPAGFDYVALGHIHRPQIILGGGPPIVYPG  215 (223)
T ss_pred             eecCCCCcccc--cccCcHhhcCcCCCEEECCCcccCeeecCCCceEEeCC
Confidence            87554221110  12233445567899999999999987644555554444

Mre11 (also known as SbcD in Escherichia coli) is a subunit of the MRX protein complex. This complex includes: Mre11, Rad50, and Xrs2/Nbs1, and plays a vital role in several nuclear processes including DNA double-strand break repair, telomere length maintenance, cell cycle checkpoint control, and meiotic recombination, in eukaryotes. During double-strand break repair, the MRX complex is required to hold the two ends of a broken chromosome together. In vitro studies show that Mre11 has 3'-5' exonuclease activity on dsDNA templates and endonuclease activity on dsDNA and ssDNA templates. In addition to the N-terminal phosphatase domain, the eukaryotic MRE11 members of this family have a C-terminal DNA binding domain (not included in this alignment model). MRE11-like proteins are found in prokaryotes and archaea was well as in eukaryotes. Mre11 belongs to the metallophosphatase (MPP) superfamily. MPPs are functi

>TIGR03768 RPA4764 metallophosphoesterase, RPA4764 family

Probab=99.54  E-value=3.6e-13  Score=115.01  Aligned_cols=100  Identities=15%  Similarity=0.155  Sum_probs=63.8

Q ss_pred             eeEec-CceE--EEEEEeCccccccccCCCCCCCCCccccchhhhhHHHHHHHHHHHhhcCC-CCe-EEEEeccccccCC
Q 024595           83 SFILD-AEIA--EFVFVDTTPFVDEYFEDPGDSTYDWRGVYRRKEYLSDLLKDVDGALKNSK-AKW-KIVVGHHTIKSAG  157 (265)
Q Consensus        83 ~y~~~-~~~~--~~i~lds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~~wl~~~l~~~~-~~~-~iv~~H~P~~~~~  157 (265)
                      +|.|+ .+++  ++|+||+..+...       .+.+   ....+.++++|++||+++|+..+ .++ +|+++|+|+.+..
T Consensus       294 yYsFd~~g~vplrvIvLDSt~~~~~-------~s~p---G~~~G~Ld~eQLaWLe~~La~a~a~~p~VVV~hHpPi~t~g  363 (492)
T TIGR03768       294 CYSFVPKSDVPLKVIVLDDTQSEHD-------GSHD---IHGHGSLDAKRWDWLKAELARGQADGQLMIIAAHIPIAVSP  363 (492)
T ss_pred             eeEEecCCCcceEEEEECCCccccc-------cCCC---CCcceeeCHHHHHHHHHHHHhCcCCCceEEEEeCCCcccCC
Confidence            57788 4644  9999999875321       0100   01134567899999999999865 444 4555555655321


Q ss_pred             C-C----C--C--------hHHHHHHHHHHHHhC-CccEEEeCCcccceEE
Q 024595          158 H-H----G--V--------TKELLLRLLPILEEN-NVDMYVNGHDHCLQHI  192 (265)
Q Consensus       158 ~-~----~--~--------~~~~~~~l~~~~~~~-~v~~vl~GH~H~~~~~  192 (265)
                      . .    .  .        ......+|..++.++ +|..+||||.|.....
T Consensus       364 i~~md~w~~~~~~~~~~L~n~~~~~eLlaLL~~hPnVla~LsGHvHrn~v~  414 (492)
T TIGR03768       364 IGSEMEWWLGAADANPDLQNAVSLTGLVTTLQKYPNLLMWIAGHRHLNTVK  414 (492)
T ss_pred             ccchhhhccccccccccccccccHHHHHHHHhcCCCeEEEEcCCccccccc
Confidence            1 0    0  0        001124789999998 7999999999987754

This model describes a small collection of probable metallophosphoresterases, related to pfam00149. Members of this protein family usually have a Sec-independent TAT (twin-arginine translocation) signal sequence, N-terminal to the region modeled by this alignment. This model and TIGR03767 divide a narrow clade of pfam00149-related enzymes.

>cd07400 MPP_YydB Bacillus subtilis YydB and related proteins, metallophosphatase domain

Probab=99.53  E-value=3.5e-14  Score=106.26  Aligned_cols=59  Identities=27%  Similarity=0.331  Sum_probs=43.2

Q ss_pred             EEEeccccccCCCCCC-hHHHHHHHHHHHHhCCccEEEeCCcccceEEe----eCCeEEEEeCC
Q 024595          146 IVVGHHTIKSAGHHGV-TKELLLRLLPILEENNVDMYVNGHDHCLQHIS----SNGIEFLTSGG  204 (265)
Q Consensus       146 iv~~H~P~~~~~~~~~-~~~~~~~l~~~~~~~~v~~vl~GH~H~~~~~~----~~~~~~i~~g~  204 (265)
                      |+++|+|+........ .....+.+.+++++++++++++||+|......    ..++.++++|+
T Consensus        81 iv~~Hhp~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~GH~H~~~~~~~~~~~~~~~~~~aGs  144 (144)
T cd07400          81 IVVLHHPLVPPPGSGRERLLDAGDALKLLAEAGVDLVLHGHKHVPYVGNISNAGGGLVVIGAGT  144 (144)
T ss_pred             EEEecCCCCCCCccccccCCCHHHHHHHHHHcCCCEEEECCCCCcCeeeccCCCCCEEEEecCC
Confidence            8899999876543211 11134568899999999999999999988776    46777776654

YydB (BSU40220) is an uncharacterized Bacillus subtilis protein that belongs to the following Bacillus subtilis gene cluster yydB-yydC-yydD-yydG-yydH-yydI-yydJ. YydB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productiv

>cd07385 MPP_YkuE_C Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain

Probab=99.48  E-value=3.3e-13  Score=108.52  Aligned_cols=141  Identities=23%  Similarity=0.191  Sum_probs=75.7

Q ss_pred             ccccCCCEEEecCCccCCCCCCCCCChhhhhhcccccCCCCCCCceEEcCCCcccCCCccccccccccccCCCceeeeee
Q 024595            5 GEKLEIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQKQWYNVLGNHDYRGDVEAQLSPVLTRKDSRWLCSRSF   84 (265)
Q Consensus         5 ~~~~~pd~vv~~GD~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~p~~~i~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~y   84 (265)
                      +++++||+|+++||+++... .  ....+.+.+..    .....|+++++||||+...........+....-.++.....
T Consensus        28 ~~~~~~d~vl~~GD~~~~~~-~--~~~~~~~~l~~----l~~~~~v~~v~GNHD~~~~~~~~~~~~l~~~~v~~L~~~~~  100 (223)
T cd07385          28 INALKPDLVVLTGDLVDGSV-D--VLELLLELLKK----LKAPLGVYAVLGNHDYYSGDEENWIEALESAGITVLRNESV  100 (223)
T ss_pred             HhccCCCEEEEcCcccCCcc-h--hhHHHHHHHhc----cCCCCCEEEECCCcccccCchHHHHHHHHHcCCEEeecCcE
Confidence            45578999999999994321 1  10122222222    12358999999999986543221011111111122222333


Q ss_pred             EecCce--EEEEEEeCccccccccCCCCCCCCCccccchhhhhHHHHHHHHHHHhhc-CCCCeEEEEeccccccCCCCCC
Q 024595           85 ILDAEI--AEFVFVDTTPFVDEYFEDPGDSTYDWRGVYRRKEYLSDLLKDVDGALKN-SKAKWKIVVGHHTIKSAGHHGV  161 (265)
Q Consensus        85 ~~~~~~--~~~i~lds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~~wl~~~l~~-~~~~~~iv~~H~P~~~~~~~~~  161 (265)
                      .+..++  +.++.++...                           ....++.+.+.. .+..+.|+++|.|...      
T Consensus       101 ~~~~~~~~i~i~G~~~~~---------------------------~~~~~~~~~~~~~~~~~~~I~l~H~P~~~------  147 (223)
T cd07385         101 EISVGGATIGIAGVDDGL---------------------------GRRPDLEKALKGLDEDDPNILLAHQPDTA------  147 (223)
T ss_pred             EeccCCeEEEEEeccCcc---------------------------ccCCCHHHHHhCCCCCCCEEEEecCCChh------
Confidence            344333  3333322110                           012234444544 4567899999997431      


Q ss_pred             hHHHHHHHHHHHHhCCccEEEeCCcccceEEee
Q 024595          162 TKELLLRLLPILEENNVDMYVNGHDHCLQHISS  194 (265)
Q Consensus       162 ~~~~~~~l~~~~~~~~v~~vl~GH~H~~~~~~~  194 (265)
                           +    .+.+.+++++++||+|..+....
T Consensus       148 -----~----~~~~~~~dl~l~GHtHggqi~~~  171 (223)
T cd07385         148 -----E----EAAAWGVDLQLSGHTHGGQIRLP  171 (223)
T ss_pred             -----H----HhcccCccEEEeccCCCCEEecc
Confidence                 1    12557899999999999986543

YkuE is an uncharacterized Bacillus subtilis protein with a C-terminal metallophosphatase domain and an N-terminal twin-arginine (RR) motif. An RR-signal peptide derived from the Bacillus subtilis YkuE protein can direct Tat-dependent secretion of agarase in Streptomyces lividans. This is an indication that YkuE is transported by the Bacillus subtilis Tat (Twin-arginine translocation) pathway machinery. YkuE belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-dia

>PRK11340 phosphodiesterase YaeI; Provisional

Probab=99.36  E-value=3.8e-12  Score=105.15  Aligned_cols=139  Identities=18%  Similarity=0.158  Sum_probs=72.9

Q ss_pred             ccccCCCEEEecCCccCCCCCCCCCChhhhhhcccccCCCCCCCceEEcCCCcccCCCcc--ccccccccccCCCceeee
Q 024595            5 GEKLEIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQKQWYNVLGNHDYRGDVE--AQLSPVLTRKDSRWLCSR   82 (265)
Q Consensus         5 ~~~~~pd~vv~~GD~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~p~~~i~GNHD~~~~~~--~~~~~~~~~~~~~~~~~~   82 (265)
                      +++.+||+|+++||++....  ......+.+.+..+.    ...|+++|+||||+.....  ......+.+.+-+.+.+.
T Consensus        76 i~~~~pDlVli~GD~~d~~~--~~~~~~~~~~L~~L~----~~~pv~~V~GNHD~~~~~~~~~~~~~~l~~~gi~lL~n~  149 (271)
T PRK11340         76 GIEQKPDLILLGGDYVLFDM--PLNFSAFSDVLSPLA----ECAPTFACFGNHDRPVGTEKNHLIGETLKSAGITVLFNQ  149 (271)
T ss_pred             HHhcCCCEEEEccCcCCCCc--cccHHHHHHHHHHHh----hcCCEEEecCCCCcccCccchHHHHHHHHhcCcEEeeCC
Confidence            45679999999999984111  111122222222221    1379999999999853211  011111222111222222


Q ss_pred             eeEe--cCceEEEEEEeCccccccccCCCCCCCCCccccchhhhhHHHHHHHHHHHhhcCCCCeEEEEeccccccCCCCC
Q 024595           83 SFIL--DAEIAEFVFVDTTPFVDEYFEDPGDSTYDWRGVYRRKEYLSDLLKDVDGALKNSKAKWKIVVGHHTIKSAGHHG  160 (265)
Q Consensus        83 ~y~~--~~~~~~~i~lds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~~wl~~~l~~~~~~~~iv~~H~P~~~~~~~~  160 (265)
                      ...+  +...+.++++|.....          ..+                 ..+.+.  +..++|++.|.|-.      
T Consensus       150 ~~~i~~~~~~i~i~G~~d~~~~----------~~~-----------------~~~~~~--~~~~~IlL~H~P~~------  194 (271)
T PRK11340        150 ATVIATPNRQFELVGTGDLWAG----------QCK-----------------PPPASE--ANLPRLVLAHNPDS------  194 (271)
T ss_pred             eEEEeeCCcEEEEEEecchhcc----------CCC-----------------hhHhcC--CCCCeEEEEcCCCh------
Confidence            2223  2234666666543210          000                 011111  25678999999843      


Q ss_pred             ChHHHHHHHHHHHHhCCccEEEeCCcccceEEe
Q 024595          161 VTKELLLRLLPILEENNVDMYVNGHDHCLQHIS  193 (265)
Q Consensus       161 ~~~~~~~~l~~~~~~~~v~~vl~GH~H~~~~~~  193 (265)
                               ...+.+.+++++||||+|..+...
T Consensus       195 ---------~~~~~~~~~dL~lsGHTHGGQi~l  218 (271)
T PRK11340        195 ---------KEVMRDEPWDLMLCGHTHGGQLRV  218 (271)
T ss_pred             ---------hHhhccCCCCEEEeccccCCeEEc
Confidence                     112445789999999999988653

>cd07394 MPP_Vps29 Homo sapiens Vps29 and related proteins, metallophosphatase domain

Probab=99.30  E-value=3.7e-10  Score=87.26  Aligned_cols=80  Identities=19%  Similarity=0.311  Sum_probs=59.1

Q ss_pred             HHHHHHHhCCccEEEeCCcccceEEeeCCeEEEEeCCCCCCCCCCCCCCCCccceeeecCCCeEEEEEeCCeEEEEEEec
Q 024595          168 RLLPILEENNVDMYVNGHDHCLQHISSNGIEFLTSGGGSKAWRGDRNWWSPEELKLYYDGQGFMSVKMTRSEAVVLFYDV  247 (265)
Q Consensus       168 ~l~~~~~~~~v~~vl~GH~H~~~~~~~~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~gy~~~~v~~~~i~~~~~~~  247 (265)
                      .+..++++.+++++++||+|.......+++.++..|+.+.+....-      .    .....|++++++++.+.+++++.
T Consensus        97 ~~~~~~~~~~~dvii~GHTH~p~~~~~~g~~viNPGSv~~~~~~~~------~----~~~~syail~~~~~~~~~~~~~l  166 (178)
T cd07394          97 SLAALQRQLDVDILISGHTHKFEAFEHEGKFFINPGSATGAFSPLD------P----NVIPSFVLMDIQGSKVVTYVYQL  166 (178)
T ss_pred             HHHHHHHhcCCCEEEECCCCcceEEEECCEEEEECCCCCCCCCCCC------C----CCCCeEEEEEecCCeEEEEEEEE
Confidence            3444556678899999999999887778999999888775432100      0    12358999999999999999997


Q ss_pred             CCCeEEEEEc
Q 024595          248 HGNILHKWSI  257 (265)
Q Consensus       248 ~g~~~~~~~i  257 (265)
                      .+..+....+
T Consensus       167 ~~~~~~~~~~  176 (178)
T cd07394         167 IDGEVKVEKI  176 (178)
T ss_pred             ECCcEEEEEe
Confidence            7776665544

Vps29 (vacuolar sorting protein 29), also known as vacuolar membrane protein Pep11, is a subunit of the retromer complex which is responsible for the retrieval of mannose-6-phosphate receptors (MPRs) from the endosomes for retrograde transport back to the Golgi. Vps29 has a phosphoesterase fold that acts as a protein interaction scaffold for retromer complex assembly as well as a phosphatase with specificity for the cytoplasmic tail of the MPR. The retromer includes the following 5 subunits: Vps35, Vps26, Vps29, and a dimer of the sorting nexins Vps5 (Snx1), and Vps17 (Snx2). Vps29 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily incl

>cd08166 MPP_Cdc1_like_1 uncharacterized subgroup related to Saccharomyces cerevisiae CDC1, metallophosphatase domain

Probab=99.27  E-value=2.6e-11  Score=93.73  Aligned_cols=112  Identities=18%  Similarity=0.301  Sum_probs=72.2

Q ss_pred             ccccCCCEEEecCCccCCCCCCCCCChhhhhh---cccccCCCCCCCceEEcCCCcccCCCccccccccccccCCCceee
Q 024595            5 GEKLEIDFVISTGDNFYEDGLTGEEDPAFLDS---FTSIYTAPSLQKQWYNVLGNHDYRGDVEAQLSPVLTRKDSRWLCS   81 (265)
Q Consensus         5 ~~~~~pd~vv~~GD~~~~~g~~~~~~~~~~~~---~~~~~~~~~l~~p~~~i~GNHD~~~~~~~~~~~~~~~~~~~~~~~   81 (265)
                      +...+||+|+++||++. .|... .+.++.+.   |..++.. ...+|++.++||||..+.......             
T Consensus        38 ~~~l~PD~Vi~lGDL~D-~G~~~-~~~e~~e~l~Rf~~If~~-~~~~~~~~VpGNHDIG~~~~~~~~-------------  101 (195)
T cd08166          38 LNFVQPDIVIFLGDLMD-EGSIA-NDDEYYSYVQRFINIFEV-PNGTKIIYLPGDNDIGGEEEDPIE-------------  101 (195)
T ss_pred             HhccCCCEEEEeccccC-CCCCC-CHHHHHHHHHHHHHHhcC-CCCCcEEEECCCCCcCCCCCCcCH-------------
Confidence            45579999999999994 44322 23344443   4444432 237999999999998652110000             


Q ss_pred             eeeEecCceEEEEEEeCccccccccCCCCCCCCCccccchhhhhHHHHHHHHHHHhhcCCCCeEEEEeccccccCCCCCC
Q 024595           82 RSFILDAEIAEFVFVDTTPFVDEYFEDPGDSTYDWRGVYRRKEYLSDLLKDVDGALKNSKAKWKIVVGHHTIKSAGHHGV  161 (265)
Q Consensus        82 ~~y~~~~~~~~~i~lds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~~wl~~~l~~~~~~~~iv~~H~P~~~~~~~~~  161 (265)
                                                                    +-++..++..        |+++|.|+.....   
T Consensus       102 ----------------------------------------------~~v~RF~~~F--------i~lsH~P~~~~~~---  124 (195)
T cd08166         102 ----------------------------------------------SKIRRFEKYF--------IMLSHVPLLAEGG---  124 (195)
T ss_pred             ----------------------------------------------HHHHHHHHhh--------eeeeccccccccc---
Confidence                                                          0122222222        9999999865321   


Q ss_pred             hHHHHHHHHHHHHhCCccEEEeCCcccceEEee
Q 024595          162 TKELLLRLLPILEENNVDMYVNGHDHCLQHISS  194 (265)
Q Consensus       162 ~~~~~~~l~~~~~~~~v~~vl~GH~H~~~~~~~  194 (265)
                           ..+..++.++++.++++||.|.......
T Consensus       125 -----~~~~~~~~~~~p~~Ifs~H~H~s~~~~~  152 (195)
T cd08166         125 -----QALKHVVTDLDPDLIFSAHRHKSSIFMY  152 (195)
T ss_pred             -----HHHHHHHHhcCceEEEEcCccceeeEEe
Confidence                 1456778888999999999999987655

A functionally uncharacterized subgroup related to the metallophosphatase domain of Saccharomyces cerevisiae Cdc1, S. cerevisiae Ted1 and human MPPE1. Cdc1 is an endoplasmic reticulum-localized transmembrane lipid phosphatase and is a subunit of DNA polymerase delta. TED1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), acts together with Emp24p and Erv25p in cargo exit from the ER. The MPPE1 gene is a candidate susceptibility gene for Bipolar disorder. Proteins in this uncharacterized subgroup belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like R

>cd07397 MPP_DevT Myxococcus xanthus DevT and related proteins, metallophosphatase domain

Probab=99.27  E-value=4.1e-11  Score=95.65  Aligned_cols=180  Identities=20%  Similarity=0.192  Sum_probs=87.4

Q ss_pred             cccccCCCEEEecCCccCCCCCCCCCChhhhhhcccccCCCCCCCceEEcCCCcccCCCccc--c---ccccccccCCCc
Q 024595            4 IGEKLEIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQKQWYNVLGNHDYRGDVEA--Q---LSPVLTRKDSRW   78 (265)
Q Consensus         4 ~~~~~~pd~vv~~GD~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~p~~~i~GNHD~~~~~~~--~---~~~~~~~~~~~~   78 (265)
                      ..++.+||+|+++||++. .      ..+..+.+      ..+..|+++++||||.......  .   +...+...+...
T Consensus        20 ~l~~~~pD~Vl~~GDi~~-~------~~~~~~~l------~~l~~p~~~V~GNHD~~~~~~~~~k~~~l~~~L~~lg~~~   86 (238)
T cd07397          20 ALHLLQPDLVLFVGDFGN-E------SVQLVRAI------SSLPLPKAVILGNHDAWYDATFRKKGDRVQEQLELLGDLH   86 (238)
T ss_pred             HHhccCCCEEEECCCCCc-C------hHHHHHHH------HhCCCCeEEEcCCCcccccccccchHHHHHHHHHHhCCcE
Confidence            345578999999999982 1      12222222      2346799999999998653211  0   110111111111


Q ss_pred             eeeeeeE-ecCceEEEEEEeCccccc--cccCCCCCCCCCccccchhhhhHHHHHHHHHHHhhc-CCCCeEEEEeccccc
Q 024595           79 LCSRSFI-LDAEIAEFVFVDTTPFVD--EYFEDPGDSTYDWRGVYRRKEYLSDLLKDVDGALKN-SKAKWKIVVGHHTIK  154 (265)
Q Consensus        79 ~~~~~y~-~~~~~~~~i~lds~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~Q~~wl~~~l~~-~~~~~~iv~~H~P~~  154 (265)
                      .   .+. .+.+...+-++-++.+..  .++..... --.+-++...    ++-++.+-+.+.. ......|+++|.++.
T Consensus        87 l---~~~~~~~~~~~~~vvG~R~~~~~g~~~~~~~~-vr~~fgi~s~----~eA~~~ive~~~~~~~~~~~VliaH~~~~  158 (238)
T cd07397          87 C---GWGRLDFPPLPLSVVGGRPFSAGGGFWLSKKA-VKAVYGVISL----EESAQRIIAAAKKAPPDLPLILLAHNGPS  158 (238)
T ss_pred             E---eecccccCCCCeEEEeeCCccCCCccccCHHH-HHHHhCCCCH----HHHHHHHHHHhhhcCCCCCeEEEeCcCCc
Confidence            1   011 222333444455554321  11110000 0000011111    2334444444432 345568999999987


Q ss_pred             cCCC---------------CCChHHHHHHHHHHHHhCCccEEEeCCcccceEEee----------CCeEEEEeCC
Q 024595          155 SAGH---------------HGVTKELLLRLLPILEENNVDMYVNGHDHCLQHISS----------NGIEFLTSGG  204 (265)
Q Consensus       155 ~~~~---------------~~~~~~~~~~l~~~~~~~~v~~vl~GH~H~~~~~~~----------~~~~~i~~g~  204 (265)
                      ..+.               .....++.+.+..+-....+.+|+.||.|..-+...          .++.|+..++
T Consensus       159 G~g~~~~~~cg~d~~~~~~~~G~~~l~~ai~~~~~~~~~~l~~fGH~H~~l~~~~~~r~~~~~~~~gt~y~N~a~  233 (238)
T cd07397         159 GLGSDAEDPCGRDWKPPGGDWGDPDLALAISQIQQGRQVPLVVFGHMHHRLRRGKGLRNMIAVDREGTVYLNAAS  233 (238)
T ss_pred             CCCcccccccccccCCcCCCCCCHHHHHHHHHHhccCCCCEEEeCCccCcccccccccceeeecCCCeEEEeccc
Confidence            6531               011234444554444334589999999998833221          6777776543

DevT is a component in the C-signal response pathway in Myxococcus xanthus that stimulates the developmentally regulated expression of the FruA response regulator protein and is required for methylation of FrzCD during fruiting body formation. DevT mutants having an in-frame deletion in the devT gene, display delayed aggregation and a cell autonomous sporulation defect. DevT belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomy

>PF12850 Metallophos_2: Calcineurin-like phosphoesterase superfamily domain; InterPro: IPR024654 Domains in this entry are members of the calcineurin-like phosphoesterase domain superfamily []

Probab=99.27  E-value=1.3e-11  Score=93.47  Aligned_cols=76  Identities=25%  Similarity=0.388  Sum_probs=55.8

Q ss_pred             CeEEEEeccccccCCCCCChHHHHHHHHHHHHhCCccEEEeCCcccceEEeeCCeEEEEeCCCCCCCCCCCCCCCCccce
Q 024595          143 KWKIVVGHHTIKSAGHHGVTKELLLRLLPILEENNVDMYVNGHDHCLQHISSNGIEFLTSGGGSKAWRGDRNWWSPEELK  222 (265)
Q Consensus       143 ~~~iv~~H~P~~~~~~~~~~~~~~~~l~~~~~~~~v~~vl~GH~H~~~~~~~~~~~~i~~g~~~~~~~~~~~~~~~~~~~  222 (265)
                      +..++++|.+++....  .    .+.+...+...+++++++||+|.......+++.+++.|+.+.....           
T Consensus        81 ~~~i~~~H~~~~~~~~--~----~~~~~~~~~~~~~~~~~~GH~H~~~~~~~~~~~~~~~Gs~~~~~~~-----------  143 (156)
T PF12850_consen   81 GFKILLSHGHPYDVQW--D----PAELREILSRENVDLVLHGHTHRPQVFKIGGIHVINPGSIGGPRHG-----------  143 (156)
T ss_dssp             TEEEEEESSTSSSSTT--T----HHHHHHHHHHTTSSEEEESSSSSEEEEEETTEEEEEE-GSSS-SSS-----------
T ss_pred             CCeEEEECCCCccccc--C----hhhhhhhhcccCCCEEEcCCcccceEEEECCEEEEECCcCCCCCCC-----------
Confidence            5588899987765431  1    2345567778899999999999999888899999998887755421           


Q ss_pred             eeecCCCeEEEEEeCC
Q 024595          223 LYYDGQGFMSVKMTRS  238 (265)
Q Consensus       223 ~~~~~~gy~~~~v~~~  238 (265)
                         ...+|++++++++
T Consensus       144 ---~~~~~~i~~~~~~  156 (156)
T PF12850_consen  144 ---DQSGYAILDIEDK  156 (156)
T ss_dssp             ---SSEEEEEEEETTT
T ss_pred             ---CCCEEEEEEEecC
Confidence               2569999998753

; PDB: 2GJU_A 1Z2W_A 1Z2X_B 3PSO_B 3PSN_B 1W24_A 2R17_B 3QFN_B 3QFO_A 3QFM_A ....

>PF14582 Metallophos_3: Metallophosphoesterase, calcineurin superfamily; PDB: 1UF3_B 2YVT_A

Probab=99.26  E-value=2.8e-11  Score=93.69  Aligned_cols=197  Identities=16%  Similarity=0.095  Sum_probs=98.9

Q ss_pred             ccccccCCCEEEecCCccCCCCCCCCCChhhh-------------------------hhcccccCCCCCCCceEEcCCCc
Q 024595            3 LIGEKLEIDFVISTGDNFYEDGLTGEEDPAFL-------------------------DSFTSIYTAPSLQKQWYNVLGNH   57 (265)
Q Consensus         3 ~~~~~~~pd~vv~~GD~~~~~g~~~~~~~~~~-------------------------~~~~~~~~~~~l~~p~~~i~GNH   57 (265)
                      ++++..+||.|+++||+.-..+    ...+|.                         ..|.+.  +..+.+|+++|||||
T Consensus        26 ~~~~e~~~D~~v~~G~~~~~~a----~~~e~~~a~~~~r~p~k~~i~~e~~~~~e~~~~ff~~--L~~~~~p~~~vPG~~   99 (255)
T PF14582_consen   26 EVIPEKGPDAVVFVGDLLKAEA----RSDEYERAQEEQREPDKSEINEEECYDSEALDKFFRI--LGELGVPVFVVPGNM   99 (255)
T ss_dssp             HHHHHHT-SEEEEES-SS-TCH----HHHHHHHHHHTT----THHHHHHHHHHHHHHHHHHHH--HHCC-SEEEEE--TT
T ss_pred             hhccccCCCEEEEeccccccch----hhhHHHHHhhhccCcchhhhhhhhhhhHHHHHHHHHH--HHhcCCcEEEecCCC
Confidence            3456679999999999982221    112333                         011111  234689999999999


Q ss_pred             ccCCCccccccccccc--cCCCcee-eeeeEecCceEEEEEEeCccccccccCCCCCCCCCccccchhhhhHHHHHHHHH
Q 024595           58 DYRGDVEAQLSPVLTR--KDSRWLC-SRSFILDAEIAEFVFVDTTPFVDEYFEDPGDSTYDWRGVYRRKEYLSDLLKDVD  134 (265)
Q Consensus        58 D~~~~~~~~~~~~~~~--~~~~~~~-~~~y~~~~~~~~~i~lds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~~wl~  134 (265)
                      |....  ..+..++..  ..+.... -.+|.+-.+.+-++++...........   .....|      ..|   ...|..
T Consensus       100 Dap~~--~~lr~a~~~e~v~p~~~~vH~sf~~~~g~y~v~G~GGeI~~~~~~~---~~~LrY------P~w---eaey~l  165 (255)
T PF14582_consen  100 DAPER--FFLREAYNAEIVTPHIHNVHESFFFWKGEYLVAGMGGEITDDQREE---EFKLRY------PAW---EAEYSL  165 (255)
T ss_dssp             S-SHH--HHHHHHHHCCCC-TTEEE-CTCEEEETTTEEEEEE-SEEESSS-BC---SSS-EE------EHH---HHHHHH
T ss_pred             CchHH--HHHHHHhccceeccceeeeeeeecccCCcEEEEecCccccCCCccc---cccccc------hHH---HHHHHH
Confidence            97431  111111110  0011100 022332224567777766553321110   001111      112   355556


Q ss_pred             HHhhcCCCCeEEEEecccc-ccCC-CCCChHHHHHHHHHHHHhCCccEEEeCCcccceEEee-CCeEEEEeCCCCCCCCC
Q 024595          135 GALKNSKAKWKIVVGHHTI-KSAG-HHGVTKELLLRLLPILEENNVDMYVNGHDHCLQHISS-NGIEFLTSGGGSKAWRG  211 (265)
Q Consensus       135 ~~l~~~~~~~~iv~~H~P~-~~~~-~~~~~~~~~~~l~~~~~~~~v~~vl~GH~H~~~~~~~-~~~~~i~~g~~~~~~~~  211 (265)
                      +.+...+...+|+++|.|+ ...+ .+...    ..+..++++++..+|+|||.|....... +.+..+.-|        
T Consensus       166 k~l~elk~~r~IlLfhtpPd~~kg~~h~GS----~~V~dlIk~~~P~ivl~Ghihe~~~~e~lG~TlVVNPG--------  233 (255)
T PF14582_consen  166 KFLRELKDYRKILLFHTPPDLHKGLIHVGS----AAVRDLIKTYNPDIVLCGHIHESHGKESLGKTLVVNPG--------  233 (255)
T ss_dssp             GGGGGCTSSEEEEEESS-BTBCTCTBTTSB----HHHHHHHHHH--SEEEE-SSS-EE--EEETTEEEEE----------
T ss_pred             HHHHhcccccEEEEEecCCccCCCcccccH----HHHHHHHHhcCCcEEEecccccchhhHHhCCEEEecCc--------
Confidence            7777776778899999999 3333 22222    4567899999999999999998875555 555555422        


Q ss_pred             CCCCCCCccceeeecCCCeEEEEEeCCeEEEE
Q 024595          212 DRNWWSPEELKLYYDGQGFMSVKMTRSEAVVL  243 (265)
Q Consensus       212 ~~~~~~~~~~~~~~~~~gy~~~~v~~~~i~~~  243 (265)
                      .+            ...+|.+|++.++++.+.
T Consensus       234 sL------------~~G~yAvI~l~~~~v~~g  253 (255)
T PF14582_consen  234 SL------------AEGDYAVIDLEQDKVEFG  253 (255)
T ss_dssp             BG------------GGTEEEEEETTTTEEEEE
T ss_pred             cc------------ccCceeEEEecccccccC
Confidence            11            246899999999888764

>COG1768 Predicted phosphohydrolase [General function prediction only]

Probab=99.25  E-value=9.5e-11  Score=87.14  Aligned_cols=167  Identities=19%  Similarity=0.192  Sum_probs=89.2

Q ss_pred             CCEEEecCCccCCCCCCCCCChhhhhhcccccCCCCCCCceEEcCCCcccCCCccccccccccccCCCceeeeeeEecCc
Q 024595           10 IDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQKQWYNVLGNHDYRGDVEAQLSPVLTRKDSRWLCSRSFILDAE   89 (265)
Q Consensus        10 pd~vv~~GD~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~p~~~i~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~   89 (265)
                      =|.|++.||+.+...        +.++.+++.-...|...-+++.||||++....+.+..+++..  -++.+..|  ...
T Consensus        44 eDiVllpGDiSWaM~--------l~ea~~Dl~~i~~LPG~K~m~rGNHDYWw~s~skl~n~lp~~--l~~~n~~f--~l~  111 (230)
T COG1768          44 EDIVLLPGDISWAMR--------LEEAEEDLRFIGDLPGTKYMIRGNHDYWWSSISKLNNALPPI--LFYLNNGF--ELL  111 (230)
T ss_pred             hhEEEecccchhhee--------chhhhhhhhhhhcCCCcEEEEecCCccccchHHHHHhhcCch--Hhhhccce--eEe
Confidence            489999999986442        222222222223466778899999999876333332222211  11111111  122


Q ss_pred             eEEEEEEeCccccccccCCCCCCCCCccccc-hhhhhHHHHHHHHHHHhhc-C--CCCeEEEEeccccccCCCCCChHHH
Q 024595           90 IAEFVFVDTTPFVDEYFEDPGDSTYDWRGVY-RRKEYLSDLLKDVDGALKN-S--KAKWKIVVGHHTIKSAGHHGVTKEL  165 (265)
Q Consensus        90 ~~~~i~lds~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Q~~wl~~~l~~-~--~~~~~iv~~H~P~~~~~~~~~~~~~  165 (265)
                      +..+.+  ++-...     +   +.++.... ..+.+-..++..|+..+.+ .  .-...|||+|+|+.+.....     
T Consensus       112 n~aI~G--~RgW~s-----~---~~~~e~~te~Deki~~RE~~RLrlsa~a~l~k~~~~fivM~HYPP~s~~~t~-----  176 (230)
T COG1768         112 NYAIVG--VRGWDS-----P---SFDSEPLTEQDEKIFLREIGRLRLSADAALPKGVSKFIVMTHYPPFSDDGTP-----  176 (230)
T ss_pred             eEEEEE--eecccC-----C---CCCcCccchhHHHHHHHHHHHHHHHHHHhcccCcCeEEEEEecCCCCCCCCC-----
Confidence            222222  222111     0   11111111 1123334445556653332 1  33467899999998765322     


Q ss_pred             HHHHHHHHHhCCccEEEeCCcccceEEee-----CCeEEEEeCC
Q 024595          166 LLRLLPILEENNVDMYVNGHDHCLQHISS-----NGIEFLTSGG  204 (265)
Q Consensus       166 ~~~l~~~~~~~~v~~vl~GH~H~~~~~~~-----~~~~~i~~g~  204 (265)
                       ..+.+++++++|..++.||.|.-.+-..     .||+|+.+.+
T Consensus       177 -~~~sevlee~rv~~~lyGHlHgv~~p~~~~s~v~Gi~y~Lvaa  219 (230)
T COG1768         177 -GPFSEVLEEGRVSKCLYGHLHGVPRPNIGFSNVRGIEYMLVAA  219 (230)
T ss_pred             -cchHHHHhhcceeeEEeeeccCCCCCCCCcccccCceEEEEec
Confidence             2456688899999999999998764322     6788876543

>cd08165 MPP_MPPE1 human MPPE1 and related proteins, metallophosphatase domain

Probab=99.25  E-value=1.8e-11  Score=92.55  Aligned_cols=45  Identities=20%  Similarity=0.318  Sum_probs=33.9

Q ss_pred             EEEeccccccCCCCCChHHHHHHHHHHHHhCCccEEEeCCcccceEEee-CCeEEEEeCCCC
Q 024595          146 IVVGHHTIKSAGHHGVTKELLLRLLPILEENNVDMYVNGHDHCLQHISS-NGIEFLTSGGGS  206 (265)
Q Consensus       146 iv~~H~P~~~~~~~~~~~~~~~~l~~~~~~~~v~~vl~GH~H~~~~~~~-~~~~~i~~g~~~  206 (265)
                      |++.|.|..                .++.++++.+++|||+|....... +++..++..+.+
T Consensus       107 ~~l~H~p~~----------------~~~~~~~~~~~l~GH~H~~~~~~~~~~~~e~~~~~~~  152 (156)
T cd08165         107 ILLQHFPLY----------------RLLQWLKPRLVLSGHTHSFCEVTHPDGTPEVTVPSFS  152 (156)
T ss_pred             eeeeCChHH----------------HHHHhhCCCEEEEcccCCCceeEEECCEEEEEEecce
Confidence            889999852                145566788999999999766544 888888765543

MPPE1 is a functionally uncharacterized metallophosphatase domain-containing protein. The MPPE1 gene is located on chromosome 18 and is a candidate susceptibility gene for Bipolar disorder. MPPE1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to

>cd07384 MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain

Probab=99.24  E-value=2.3e-11  Score=93.32  Aligned_cols=57  Identities=30%  Similarity=0.392  Sum_probs=35.9

Q ss_pred             ccccccCCCEEEecCCccCCCCCCCCCChhhh---hhcccccCCCC---CCCceEEcCCCcccCC
Q 024595            3 LIGEKLEIDFVISTGDNFYEDGLTGEEDPAFL---DSFTSIYTAPS---LQKQWYNVLGNHDYRG   61 (265)
Q Consensus         3 ~~~~~~~pd~vv~~GD~~~~~g~~~~~~~~~~---~~~~~~~~~~~---l~~p~~~i~GNHD~~~   61 (265)
                      +++++.+||+||++||+++ .+... ...++.   +.|..++....   ..+|+++|+||||...
T Consensus        39 ~~i~~~~pd~vi~lGDl~d-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~GNHD~g~  101 (171)
T cd07384          39 TALQRLKPDVVLFLGDLFD-GGRIA-DSEEWEEYVKRFKKIFFLPSNGLEDIPVYYVPGNHDIGY  101 (171)
T ss_pred             HHHHhcCCCEEEEeccccC-CcEeC-CHHHHHHHHHHHHHHhcccccccCCceEEEECCccccCC
Confidence            4556789999999999994 33221 112233   23334332222   2689999999999864

Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. This group also contains Saccharomyces cerevisiae TED1 (Trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), which acts together wit

>cd00841 MPP_YfcE Escherichia coli YfcE and related proteins, metallophosphatase domain

Probab=99.23  E-value=1.9e-10  Score=87.04  Aligned_cols=79  Identities=18%  Similarity=0.219  Sum_probs=55.4

Q ss_pred             eEEEEeccccccCCCCCChHHHHHHHHHHHHhCCccEEEeCCcccceEEeeCCeEEEEeCCCCCCCCCCCCCCCCcccee
Q 024595          144 WKIVVGHHTIKSAGHHGVTKELLLRLLPILEENNVDMYVNGHDHCLQHISSNGIEFLTSGGGSKAWRGDRNWWSPEELKL  223 (265)
Q Consensus       144 ~~iv~~H~P~~~~~~~~~~~~~~~~l~~~~~~~~v~~vl~GH~H~~~~~~~~~~~~i~~g~~~~~~~~~~~~~~~~~~~~  223 (265)
                      .+|+++|.+.......   ..   . ..++++.+++++++||+|.......+++.++..|+.+.+..             
T Consensus        76 ~~i~v~Hg~~~~~~~~---~~---~-~~~~~~~~~d~vi~GHtH~~~~~~~~~~~~inpGs~~~~~~-------------  135 (155)
T cd00841          76 KRIFLTHGHLYGVKNG---LD---R-LYLAKEGGADVVLYGHTHIPVIEKIGGVLLLNPGSLSLPRG-------------  135 (155)
T ss_pred             EEEEEECCcccccccc---hh---h-hhhhhhcCCCEEEECcccCCccEEECCEEEEeCCCccCcCC-------------
Confidence            4678888876543211   01   1 34456678999999999999877778999998888775431             


Q ss_pred             eecCCCeEEEEEeCCeEEEEE
Q 024595          224 YYDGQGFMSVKMTRSEAVVLF  244 (265)
Q Consensus       224 ~~~~~gy~~~~v~~~~i~~~~  244 (265)
                       ....+|+++++++ ++++++
T Consensus       136 -~~~~~~~i~~~~~-~~~~~~  154 (155)
T cd00841         136 -GGPPTYAILEIDD-KGEVEI  154 (155)
T ss_pred             -CCCCeEEEEEecC-CCcEEE
Confidence             1356999999987 666654

YfcE is a manganase-dependent metallophosphatase, found in bacteria and archaea, that cleaves bis-p-nitrophenyl phosphate, thymidine 5'-monophosphate-p-nitrophenyl ester, and p-nitrophenyl phosphorylcholine, but is unable to hydrolyze 2',3 ' or 3',5' cyclic nucleic phosphodiesters, and various phosphomonoesters, including p-nitrophenyl phosphate. This family also includes the Bacilus subtilis YsnB and Methanococcus jannaschii MJ0936 proteins. This domain family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid ph

>cd00838 MPP_superfamily metallophosphatase superfamily, metallophosphatase domain

Probab=99.23  E-value=3.6e-11  Score=87.69  Aligned_cols=36  Identities=28%  Similarity=0.521  Sum_probs=27.9

Q ss_pred             HHHHHHHHHhCCccEEEeCCcccceEEe--eCCeEEEE
Q 024595          166 LLRLLPILEENNVDMYVNGHDHCLQHIS--SNGIEFLT  201 (265)
Q Consensus       166 ~~~l~~~~~~~~v~~vl~GH~H~~~~~~--~~~~~~i~  201 (265)
                      ...+..++...+++++++||+|......  ..++.+++
T Consensus        92 ~~~~~~~~~~~~~~~~~~GH~H~~~~~~~~~~~~~~v~  129 (131)
T cd00838          92 SEALLELLEKYGVDLVLSGHTHVYERREPDGGGTLYIN  129 (131)
T ss_pred             HHHHHHHHHHhCCCEEEeCCeeccccccCCCCceEEec
Confidence            4566778888899999999999998776  35555554

Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive me

>TIGR00583 mre11 DNA repair protein (mre11)

Probab=99.20  E-value=4.2e-10  Score=97.12  Aligned_cols=100  Identities=13%  Similarity=0.058  Sum_probs=58.0

Q ss_pred             CCeEEEEeccccccCCCCCChHHHHHHHHHHHHhCCccEEEeCCcccceEEee----CCeEEEEeCCCCCCCCCCCCCCC
Q 024595          142 AKWKIVVGHHTIKSAGHHGVTKELLLRLLPILEENNVDMYVNGHDHCLQHISS----NGIEFLTSGGGSKAWRGDRNWWS  217 (265)
Q Consensus       142 ~~~~iv~~H~P~~~~~~~~~~~~~~~~l~~~~~~~~v~~vl~GH~H~~~~~~~----~~~~~i~~g~~~~~~~~~~~~~~  217 (265)
                      ..+.|++.|..........   ...   ..++ ...+++|+.||.|.......    .+...+.+  |+....+..    
T Consensus       200 ~~fnIlv~Hq~~~~~~~~~---~ip---e~ll-p~~fDYValGHiH~~~~~p~~~~~~~~~V~yp--GS~v~tSf~----  266 (405)
T TIGR00583       200 DWFNLLVLHQNHAAHTSTS---FLP---ESFI-PDFFDLVIWGHEHECLPDPVYNPSDGFYVLQP--GSTVATSLT----  266 (405)
T ss_pred             CceEEEEeCceecCCCCcc---cCc---hhhh-hccCcEEEecccccccccccccCCCCceEEEC--CCccccccc----
Confidence            4568999999864322111   011   2233 34699999999998764321    22222222  221111110    


Q ss_pred             CccceeeecCCCeEEEEEeCCeEEEEEEecC-CCeEEEEEcc
Q 024595          218 PEELKLYYDGQGFMSVKMTRSEAVVLFYDVH-GNILHKWSIP  258 (265)
Q Consensus       218 ~~~~~~~~~~~gy~~~~v~~~~i~~~~~~~~-g~~~~~~~i~  258 (265)
                      .    -.....|+.+++++++.++++++... -+++...++.
T Consensus       267 e----~E~~~Kgv~lVeI~~~~~~~~~IpL~~vRpf~~~~i~  304 (405)
T TIGR00583       267 P----GEALPKHVFILNIKGRKFASKPIPLQTVRPFVMKEIL  304 (405)
T ss_pred             c----cccCCCEEEEEEEcCCeeEEEEeeCCCcccEEEEEEE
Confidence            0    01246899999999889999999854 6777766554

All proteins in this family for which functions are known are subunits of a nuclease complex made up of multiple proteins including MRE11 and RAD50 homologs. The functions of this nuclease complex include recombinational repair and non-homolgous end joining. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). The proteins in this family are distantly related to proteins in the SbcCD complex of bacteria.

>cd07379 MPP_239FB Homo sapiens 239FB and related proteins, metallophosphatase domain

Probab=99.14  E-value=3.2e-10  Score=83.79  Aligned_cols=59  Identities=17%  Similarity=0.034  Sum_probs=38.2

Q ss_pred             eEEEEeccccccCCCCCCh--HHHHHHHHHHHHhCCccEEEeCCcccceEEe-----eCCeEEEEe
Q 024595          144 WKIVVGHHTIKSAGHHGVT--KELLLRLLPILEENNVDMYVNGHDHCLQHIS-----SNGIEFLTS  202 (265)
Q Consensus       144 ~~iv~~H~P~~~~~~~~~~--~~~~~~l~~~~~~~~v~~vl~GH~H~~~~~~-----~~~~~~i~~  202 (265)
                      +.|+++|.|+++.......  ..-...+..++++.+++++++||+|......     ..++.+++.
T Consensus        69 ~~ilv~H~~p~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~GH~H~~~~~~~~~~~~~~t~~in~  134 (135)
T cd07379          69 TDILVTHGPPYGHLDLVSSGQRVGCEELLNRVQRVRPKLHVFGHIHEGYGAERVLDTDGETLFVNA  134 (135)
T ss_pred             CEEEEECCCCCcCccccccCcccCCHHHHHHHHHHCCcEEEEcCcCCcCceeEecccCCCEEEEeC
Confidence            3578889888764321110  0112446667788889999999999996433     367777653

239FB (Fetal brain protein 239) is thought to play a role in central nervous system development, but its specific role in unknown. 239FB is expressed predominantly in human fetal brain from a gene located in the chromosome 11p13 region associated with the mental retardation component of the WAGR (Wilms tumor, Aniridia, Genitourinary anomalies, Mental retardation) syndrome. Orthologous brp-like (brain protein 239-like) proteins have been identified in the invertebrate amphioxus group and in vertebrates. 239FB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzyme

>TIGR00040 yfcE phosphoesterase, MJ0936 family

Probab=99.13  E-value=2.5e-09  Score=81.23  Aligned_cols=78  Identities=19%  Similarity=0.268  Sum_probs=52.3

Q ss_pred             eEEEEeccccccCCCCCChHHHHHHHHHHHHhCCccEEEeCCcccceEEeeCCeEEEEeCCCCCCCCCCCCCCCCcccee
Q 024595          144 WKIVVGHHTIKSAGHHGVTKELLLRLLPILEENNVDMYVNGHDHCLQHISSNGIEFLTSGGGSKAWRGDRNWWSPEELKL  223 (265)
Q Consensus       144 ~~iv~~H~P~~~~~~~~~~~~~~~~l~~~~~~~~v~~vl~GH~H~~~~~~~~~~~~i~~g~~~~~~~~~~~~~~~~~~~~  223 (265)
                      .+++++|..++...  ..    ...+..+.+..+++++++||+|........++.++..|+.+.....            
T Consensus        79 ~~i~l~Hg~~~~~~--~~----~~~l~~~~~~~~~d~vi~GHtH~~~~~~~~~~~~iNpGs~~~~~~~------------  140 (158)
T TIGR00040        79 IDFGLVHGDLVYPR--GD----LLVLEYLAKELGVDVLIFGHTHIPVAEELRGILLINPGSLTGPRNG------------  140 (158)
T ss_pred             EEEEEEeCcccccC--CC----HHHHHHHHhccCCCEEEECCCCCCccEEECCEEEEECCccccccCC------------
Confidence            46788886542211  11    1233444555688999999999998777789999888776643210            


Q ss_pred             eecCCCeEEEEEeCCeEE
Q 024595          224 YYDGQGFMSVKMTRSEAV  241 (265)
Q Consensus       224 ~~~~~gy~~~~v~~~~i~  241 (265)
                        ...+|.+++++++.++
T Consensus       141 --~~~~~~il~~~~~~~~  156 (158)
T TIGR00040       141 --NTPSYAILDVDKDKVT  156 (158)
T ss_pred             --CCCeEEEEEecCCeEE
Confidence              1458999999887665

Members of this largely uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11, and a family of uncharacterized archaeal putative phosphoesterases described by TIGR00024. In this family, the His residue in GNHD portion of the motif is not conserved. The member MJ0936, one of two from Methanococcus jannaschii, was shown (PubMed:15128743) to act on model phosphodiesterase substrates; a divalent cation was required.

>PHA02546 47 endonuclease subunit; Provisional

Probab=99.10  E-value=9.2e-10  Score=93.82  Aligned_cols=55  Identities=20%  Similarity=0.221  Sum_probs=33.3

Q ss_pred             ccccccCCCEEEecCCccCCCCCCCCCChhhhhh--cccccCCCCCCCceEEcCCCcccC
Q 024595            3 LIGEKLEIDFVISTGDNFYEDGLTGEEDPAFLDS--FTSIYTAPSLQKQWYNVLGNHDYR   60 (265)
Q Consensus         3 ~~~~~~~pd~vv~~GD~~~~~g~~~~~~~~~~~~--~~~~~~~~~l~~p~~~i~GNHD~~   60 (265)
                      +.+++++||+||++||++............+...  +..+   ...++|+++++||||..
T Consensus        33 ~~a~~~~vD~VliaGDlfD~~~~~~~~~~~~~~~~l~~~L---~~~gi~v~~I~GNHD~~   89 (340)
T PHA02546         33 EYSKAHGITTWIQLGDTFDVRKAITQNTMNFVREKIFDLL---KEAGITLHVLVGNHDMY   89 (340)
T ss_pred             HHHHHcCCCEEEECCcccCCCCCCCHHHHHHHHHHHHHHH---HHCCCeEEEEccCCCcc
Confidence            3466789999999999984321111111112211  2221   23479999999999974

>cd07403 MPP_TTHA0053 Thermus thermophilus TTHA0053 and related proteins, metallophosphatase domain

Probab=99.06  E-value=9.7e-10  Score=80.43  Aligned_cols=27  Identities=15%  Similarity=0.340  Sum_probs=22.1

Q ss_pred             HHHHHHHHhCCccEEEeCCcccceEEe
Q 024595          167 LRLLPILEENNVDMYVNGHDHCLQHIS  193 (265)
Q Consensus       167 ~~l~~~~~~~~v~~vl~GH~H~~~~~~  193 (265)
                      +.+.+++.+++++++++||+|......
T Consensus        81 ~~l~~~l~~~~~~~vl~GH~H~~~~~~  107 (129)
T cd07403          81 EAFLDFIDRFRPKLFIHGHTHLNYGYQ  107 (129)
T ss_pred             HHHHHHHHHHCCcEEEEcCcCCCcCcc
Confidence            456677888899999999999887654

TTHA0053 is an uncharacterized Thermus thermophilus protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.

>COG2129 Predicted phosphoesterases, related to the Icc protein [General function prediction only]

Probab=99.05  E-value=5.6e-09  Score=81.28  Aligned_cols=193  Identities=13%  Similarity=0.127  Sum_probs=104.0

Q ss_pred             ccccccCCCEEEecCCccCCCCCCCCCChhhhhh---cccccCCCCCCCceEEcCCCcccCCCccccccccccccCCCce
Q 024595            3 LIGEKLEIDFVISTGDNFYEDGLTGEEDPAFLDS---FTSIYTAPSLQKQWYNVLGNHDYRGDVEAQLSPVLTRKDSRWL   79 (265)
Q Consensus         3 ~~~~~~~pd~vv~~GD~~~~~g~~~~~~~~~~~~---~~~~~~~~~l~~p~~~i~GNHD~~~~~~~~~~~~~~~~~~~~~   79 (265)
                      ..++..++|+++++||++|.+-    .+......   ++.   .....+|++++|||=|-..-. ..+.    . .....
T Consensus        24 ~~~~~~~~D~lviaGDlt~~~~----~~~~~~~~~~~~e~---l~~~~~~v~avpGNcD~~~v~-~~l~----~-~~~~v   90 (226)
T COG2129          24 NAAADIRADLLVIAGDLTYFHF----GPKEVAEELNKLEA---LKELGIPVLAVPGNCDPPEVI-DVLK----N-AGVNV   90 (226)
T ss_pred             HHHhhccCCEEEEecceehhhc----CchHHHHhhhHHHH---HHhcCCeEEEEcCCCChHHHH-HHHH----h-ccccc
Confidence            3455668999999999993221    11111111   122   234689999999997753311 1111    1 11111


Q ss_pred             eeeeeEecCceEEEEEEeCccccccccCCCCCCCCCccccchhhhhHHHH-HHHHHHHhhcCCCCeEEEEeccccccCCC
Q 024595           80 CSRSFILDAEIAEFVFVDTTPFVDEYFEDPGDSTYDWRGVYRRKEYLSDL-LKDVDGALKNSKAKWKIVVGHHTIKSAGH  158 (265)
Q Consensus        80 ~~~~y~~~~~~~~~i~lds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q-~~wl~~~l~~~~~~~~iv~~H~P~~~~~~  158 (265)
                      .++  .+..+++.|+.+-..-.          +  +|   .+...+.+++ ..-+++.+....+..+|+++|.||+....
T Consensus        91 ~~~--v~~i~~~~~~G~Ggsn~----------t--p~---nt~~e~~E~~I~s~l~~~v~~~~~~~~Il~~HaPP~gt~~  153 (226)
T COG2129          91 HGR--VVEIGGYGFVGFGGSNP----------T--PF---NTPREFSEDEIYSKLKSLVKKADNPVNILLTHAPPYGTLL  153 (226)
T ss_pred             ccc--eEEecCcEEEEecccCC----------C--CC---CCccccCHHHHHHHHHHHHhcccCcceEEEecCCCCCccc
Confidence            111  12334555555322110          0  00   0011222233 33344444443333339999999987542


Q ss_pred             C--CChHHH-HHHHHHHHHhCCccEEEeCCcccceEEee-CCeEEEEeCCCCCCCCCCCCCCCCccceeeecCCCeEEEE
Q 024595          159 H--GVTKEL-LLRLLPILEENNVDMYVNGHDHCLQHISS-NGIEFLTSGGGSKAWRGDRNWWSPEELKLYYDGQGFMSVK  234 (265)
Q Consensus       159 ~--~~~~~~-~~~l~~~~~~~~v~~vl~GH~H~~~~~~~-~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~gy~~~~  234 (265)
                      .  ...... ...+..++++.++.+.+|||.|-...... +++..+.-|.                    .....|++++
T Consensus       154 d~~~g~~hvGS~~vr~~ieefqP~l~i~GHIHEs~G~d~iG~TivVNPG~--------------------~~~g~yA~i~  213 (226)
T COG2129         154 DTPSGYVHVGSKAVRKLIEEFQPLLGLHGHIHESRGIDKIGNTIVVNPGP--------------------LGEGRYALIE  213 (226)
T ss_pred             cCCCCccccchHHHHHHHHHhCCceEEEeeecccccccccCCeEEECCCC--------------------ccCceEEEEE
Confidence            2  110111 25678899999999999999998766655 4555554222                    1356889999


Q ss_pred             EeCCeEEEEEE
Q 024595          235 MTRSEAVVLFY  245 (265)
Q Consensus       235 v~~~~i~~~~~  245 (265)
                      +++..++.+.+
T Consensus       214 l~~~~Vk~~~~  224 (226)
T COG2129         214 LEKEVVKLEQF  224 (226)
T ss_pred             ecCcEEEEEEe
Confidence            99998877654

>cd08164 MPP_Ted1 Saccharomyces cerevisiae Ted1 and related proteins, metallophosphatase domain

Probab=99.04  E-value=2.7e-10  Score=87.98  Aligned_cols=54  Identities=24%  Similarity=0.307  Sum_probs=35.4

Q ss_pred             ccccCCCEEEecCCccCCCCCCCCCChhhhhh---cccccCCCC----------------CCCceEEcCCCcccCC
Q 024595            5 GEKLEIDFVISTGDNFYEDGLTGEEDPAFLDS---FTSIYTAPS----------------LQKQWYNVLGNHDYRG   61 (265)
Q Consensus         5 ~~~~~pd~vv~~GD~~~~~g~~~~~~~~~~~~---~~~~~~~~~----------------l~~p~~~i~GNHD~~~   61 (265)
                      ....+||.|+++||++ +.++.  .+.+|.+.   |..++....                -++|++.|+||||...
T Consensus        40 ~~~l~Pd~V~fLGDLf-d~~w~--~D~ef~~~~~RF~~if~~~~~~~~~~~~~~~~~~~~~~i~~i~V~GNHDIG~  112 (193)
T cd08164          40 QFWLKPDAVVVLGDLF-SSQWI--DDEEFAKRADRYRRRFFGRNDWQVGNISLAARTFEDGKTPLINIAGNHDVGY  112 (193)
T ss_pred             HHhcCCCEEEEecccc-CCCcc--cHHHHHHHHHHHHHHhcCCcccccccccccccccccCCceEEEECCcccCCC
Confidence            3457999999999999 44554  34444433   333331111                1489999999999854

Saccharomyces cerevisiae Ted1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1) is a metallophosphatase domain-containing protein which acts together with Emp24p and Erv25p in cargo exit from the ER. Ted1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the

>PRK09453 phosphodiesterase; Provisional

Probab=99.03  E-value=9.3e-09  Score=79.99  Aligned_cols=65  Identities=22%  Similarity=0.250  Sum_probs=46.2

Q ss_pred             hCCccEEEeCCcccceEEeeCCeEEEEeCCCCCCCCCCCCCCCCccceeeecCCCeEEEEEeCCeEEEEEEe-cCCCeEE
Q 024595          175 ENNVDMYVNGHDHCLQHISSNGIEFLTSGGGSKAWRGDRNWWSPEELKLYYDGQGFMSVKMTRSEAVVLFYD-VHGNILH  253 (265)
Q Consensus       175 ~~~v~~vl~GH~H~~~~~~~~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~gy~~~~v~~~~i~~~~~~-~~g~~~~  253 (265)
                      ..+.+++++||+|.......+++.+++.|+.+.+. +             .....|+++++.    +++.++ ..|+++-
T Consensus       116 ~~~~d~vi~GHtH~p~~~~~~~~~~iNpGs~~~p~-~-------------~~~~s~~il~~~----~~~~~~~~~~~~~~  177 (182)
T PRK09453        116 LHDGDVLVYGHTHIPVAEKQGGIILFNPGSVSLPK-G-------------GYPASYGILDDN----VLSVIDLEGGEVIA  177 (182)
T ss_pred             ccCCCEEEECCCCCCcceEECCEEEEECCCccccC-C-------------CCCCeEEEEECC----cEEEEECCCCeEEE
Confidence            34679999999999887777899999988876442 1             123478888873    445566 5667777


Q ss_pred             EEEc
Q 024595          254 KWSI  257 (265)
Q Consensus       254 ~~~i  257 (265)
                      +..|
T Consensus       178 ~~~~  181 (182)
T PRK09453        178 QVAI  181 (182)
T ss_pred             eecc
Confidence            6654

>cd07389 MPP_PhoD Bacillus subtilis PhoD and related proteins, metallophosphatase domain

Probab=98.93  E-value=3.6e-09  Score=85.31  Aligned_cols=57  Identities=18%  Similarity=0.360  Sum_probs=37.4

Q ss_pred             cccCCCEEEecCCccCCCCCCC-----------------CCChhhhhhcccccCCCC-----CCCceEEcCCCcccCCC
Q 024595            6 EKLEIDFVISTGDNFYEDGLTG-----------------EEDPAFLDSFTSIYTAPS-----LQKQWYNVLGNHDYRGD   62 (265)
Q Consensus         6 ~~~~pd~vv~~GD~~~~~g~~~-----------------~~~~~~~~~~~~~~~~~~-----l~~p~~~i~GNHD~~~~   62 (265)
                      .+.+|||+|++||.||.++...                 .....+++.+......+.     .++|+++++++||+.++
T Consensus        26 ~~~~~d~~l~~GD~IY~d~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~Y~~~~~~p~~~~~~~~~p~~~iwDDHDi~~n  104 (228)
T cd07389          26 SEEDPDLFLHLGDQIYADDVGGLMPALIEGRPLEPAHEALTLEEYRERYRQYRSDPDLQRLLAQVPTIGIWDDHDIGDN  104 (228)
T ss_pred             cccCCCEEEEcCCeecccCCCcccccccCCcCcCCcccccCHHHHHHHHHHHcCCHHHHHHhhcCCEEEeccccccccc
Confidence            4679999999999999886421                 111233333333222211     26899999999999865

PhoD (also known as alkaline phosphatase D/APaseD in Bacillus subtilis) is a secreted phosphodiesterase encoded by phoD of the Pho regulon in Bacillus subtilis. PhoD homologs are found in prokaryotes, eukaryotes, and archaea. PhoD contains a twin arginine (RR) motif and is transported by the Tat (Twin-arginine translocation) translocation pathway machinery (TatAyCy). This family also includes the Fusarium oxysporum Fso1 protein. PhoD belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF

>TIGR01854 lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase

Probab=98.93  E-value=8.6e-09  Score=83.25  Aligned_cols=38  Identities=16%  Similarity=0.211  Sum_probs=28.9

Q ss_pred             HHHHHHHhCCccEEEeCCcccceEEeeC----CeEEEEeCCC
Q 024595          168 RLLPILEENNVDMYVNGHDHCLQHISSN----GIEFLTSGGG  205 (265)
Q Consensus       168 ~l~~~~~~~~v~~vl~GH~H~~~~~~~~----~~~~i~~g~~  205 (265)
                      .+..++++++++++++||+|........    +..|++.|..
T Consensus       176 ~~~~~~~~~~~~~~i~GHtH~~~~~~~~~~~~~~~~~~lgdW  217 (231)
T TIGR01854       176 EVAAVMRRYGVDRLIHGHTHRPAIHPLQADGQPATRIVLGDW  217 (231)
T ss_pred             HHHHHHHHcCCCEEEECCccCcceeecccCCCccEEEEECCC
Confidence            3566677789999999999999866543    5678876654

This model represents LpxH, UDP-2,3-diacylglucosamine hydrolase, and essential enzyme in E. coli that catalyzes the fourth step in lipid A biosynthesis. Note that Pseudomonas aeruginosa has both a member of this family that shares this function and a more distant homolog, designated LpxH2, that does not. Many species that produce lipid A lack an lpxH gene in this family; some of those species have an lpxH2 gene instead, although for which the function is unknown.

>COG1408 Predicted phosphohydrolases [General function prediction only]

Probab=98.90  E-value=1.6e-08  Score=83.61  Aligned_cols=52  Identities=27%  Similarity=0.273  Sum_probs=32.4

Q ss_pred             ccccCCCEEEecCCccCCCCCCCCCChhhhhhcccccCCCCCCCceEEcCCCcccCCC
Q 024595            5 GEKLEIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQKQWYNVLGNHDYRGD   62 (265)
Q Consensus         5 ~~~~~pd~vv~~GD~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~p~~~i~GNHD~~~~   62 (265)
                      ..++.||+|+++||++....  ......+......+    ....++++++||||+...
T Consensus        69 i~~~~~DlivltGD~~~~~~--~~~~~~~~~~L~~L----~~~~gv~av~GNHd~~~~  120 (284)
T COG1408          69 IANELPDLIVLTGDYVDGDR--PPGVAALALFLAKL----KAPLGVFAVLGNHDYGVD  120 (284)
T ss_pred             HHhcCCCEEEEEeeeecCCC--CCCHHHHHHHHHhh----hccCCEEEEecccccccc
Confidence            45567899999999994211  11112232222221    235689999999999764

>COG0420 SbcD DNA repair exonuclease [DNA replication, recombination, and repair]

Probab=98.87  E-value=1.1e-08  Score=89.13  Aligned_cols=55  Identities=24%  Similarity=0.364  Sum_probs=36.9

Q ss_pred             ccccccCCCEEEecCCccCCCCCCCCCC-hhhhhhcccccCCCCCCCceEEcCCCcccCC
Q 024595            3 LIGEKLEIDFVISTGDNFYEDGLTGEED-PAFLDSFTSIYTAPSLQKQWYNVLGNHDYRG   61 (265)
Q Consensus         3 ~~~~~~~pd~vv~~GD~~~~~g~~~~~~-~~~~~~~~~~~~~~~l~~p~~~i~GNHD~~~   61 (265)
                      +.|++.++||||++||+++ .+.++.+. .++.+.+..+   ...++|+++|+||||...
T Consensus        34 ~~a~~~~vD~vliAGDlFd-~~~Ps~~a~~~~~~~l~~l---~~~~Ipv~~I~GNHD~~~   89 (390)
T COG0420          34 EIAKEEKVDFVLIAGDLFD-TNNPSPRALKLFLEALRRL---KDAGIPVVVIAGNHDSPS   89 (390)
T ss_pred             HHHHHccCCEEEEcccccc-CCCCCHHHHHHHHHHHHHh---ccCCCcEEEecCCCCchh
Confidence            4677889999999999884 44333221 2233333332   236799999999999754

>COG0622 Predicted phosphoesterase [General function prediction only]

Probab=98.86  E-value=2.3e-07  Score=70.81  Aligned_cols=87  Identities=22%  Similarity=0.238  Sum_probs=61.9

Q ss_pred             CeEEEEeccccccCCCCCChHHHHHHHHHHHHhCCccEEEeCCcccceEEeeCCeEEEEeCCCCCCCCCCCCCCCCccce
Q 024595          143 KWKIVVGHHTIKSAGHHGVTKELLLRLLPILEENNVDMYVNGHDHCLQHISSNGIEFLTSGGGSKAWRGDRNWWSPEELK  222 (265)
Q Consensus       143 ~~~iv~~H~P~~~~~~~~~~~~~~~~l~~~~~~~~v~~vl~GH~H~~~~~~~~~~~~i~~g~~~~~~~~~~~~~~~~~~~  222 (265)
                      ..+|+++|.-.+....  .    ...+..+.++.+.++++.||+|.......+++.+++-|+.+.+..+           
T Consensus        81 g~ki~l~HGh~~~~~~--~----~~~l~~la~~~~~Dvli~GHTH~p~~~~~~~i~~vNPGS~s~pr~~-----------  143 (172)
T COG0622          81 GVKIFLTHGHLYFVKT--D----LSLLEYLAKELGADVLIFGHTHKPVAEKVGGILLVNPGSVSGPRGG-----------  143 (172)
T ss_pred             CEEEEEECCCcccccc--C----HHHHHHHHHhcCCCEEEECCCCcccEEEECCEEEEcCCCcCCCCCC-----------
Confidence            3467788864433111  1    1233445556789999999999999999999999988777655432           


Q ss_pred             eeecCCCeEEEEEeCCeEEEEEEecCC
Q 024595          223 LYYDGQGFMSVKMTRSEAVVLFYDVHG  249 (265)
Q Consensus       223 ~~~~~~gy~~~~v~~~~i~~~~~~~~g  249 (265)
                         ...+|+++++++.++++.+++...
T Consensus       144 ---~~~sy~il~~~~~~~~~~~~~~~~  167 (172)
T COG0622         144 ---NPASYAILDVDNLEVEVLFLERDR  167 (172)
T ss_pred             ---CCcEEEEEEcCCCEEEEEEeeccc
Confidence               134899999999999988876543

>PRK10966 exonuclease subunit SbcD; Provisional

Probab=98.86  E-value=2.9e-08  Score=86.39  Aligned_cols=65  Identities=15%  Similarity=0.074  Sum_probs=41.8

Q ss_pred             CccEEEeCCcccceEEe-eCCeEEEEeCCCCCCCCCCCCCCCCccceee--ecCCCeEEEEEeCC-eEEEEEEe-cCCCe
Q 024595          177 NVDMYVNGHDHCLQHIS-SNGIEFLTSGGGSKAWRGDRNWWSPEELKLY--YDGQGFMSVKMTRS-EAVVLFYD-VHGNI  251 (265)
Q Consensus       177 ~v~~vl~GH~H~~~~~~-~~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~--~~~~gy~~~~v~~~-~i~~~~~~-~~g~~  251 (265)
                      .+++|..||.|..+... ...+.|    +|+      +.++     .|.  ....|+.+|+++++ ..+++.+. ...+.
T Consensus       220 ~~dYvALGHlH~~Q~v~~~~~vrY----sGS------pl~~-----sFsE~~~~K~v~lVel~~~~~~~v~~i~l~~~~~  284 (407)
T PRK10966        220 PADYIALGHIHRAQKVGGTEHIRY----SGS------PIPL-----SFDELGKSKSVHLVEFDQGKLQSVTPLPVPVFQP  284 (407)
T ss_pred             ccCeeeccccccCcCCCCCCcEEE----cCC------CCCC-----CccccCCCCeEEEEEEcCCccceEEEEECCCCce
Confidence            47999999999998773 244555    222      1111     111  13579999999866 56788887 44566


Q ss_pred             EEEEE
Q 024595          252 LHKWS  256 (265)
Q Consensus       252 ~~~~~  256 (265)
                      +.+++
T Consensus       285 l~~~~  289 (407)
T PRK10966        285 MAVLK  289 (407)
T ss_pred             eEEec
Confidence            66654

>PRK05340 UDP-2,3-diacylglucosamine hydrolase; Provisional

Probab=98.86  E-value=1.4e-08  Score=82.61  Aligned_cols=39  Identities=18%  Similarity=0.233  Sum_probs=27.5

Q ss_pred             HHHHHHHHhCCccEEEeCCcccceEEee--C--CeEEEEeCCC
Q 024595          167 LRLLPILEENNVDMYVNGHDHCLQHISS--N--GIEFLTSGGG  205 (265)
Q Consensus       167 ~~l~~~~~~~~v~~vl~GH~H~~~~~~~--~--~~~~i~~g~~  205 (265)
                      +.+.+++++++++++++||+|.......  .  +..+++.|..
T Consensus       177 ~~~~~~~~~~~~~~~i~GH~H~~~~~~~~~~~~~~~~~~lgdw  219 (241)
T PRK05340        177 EAVAALMEKHGVDTLIHGHTHRPAIHQLQAGGQPATRIVLGDW  219 (241)
T ss_pred             HHHHHHHHHhCCCEEEECcccCcceeeccCCCcceEEEEeCCC
Confidence            4566788889999999999999865433  2  2356665543

>cd07398 MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and related proteins, metallophosphatase domain

Probab=98.79  E-value=1e-08  Score=82.05  Aligned_cols=39  Identities=18%  Similarity=0.230  Sum_probs=32.4

Q ss_pred             HHHHHHHHHhCCccEEEeCCcccceEEeeCCeEEEEeCC
Q 024595          166 LLRLLPILEENNVDMYVNGHDHCLQHISSNGIEFLTSGG  204 (265)
Q Consensus       166 ~~~l~~~~~~~~v~~vl~GH~H~~~~~~~~~~~~i~~g~  204 (265)
                      ...+..++++++++++++||+|........++.|+++|+
T Consensus       178 ~~~~~~~~~~~~~~~~i~GH~H~~~~~~~~~~~~~n~G~  216 (217)
T cd07398         178 EEAVARLARRKGVDGVICGHTHRPALHELDGKLYINLGD  216 (217)
T ss_pred             HHHHHHHHHhcCCCEEEECCCCCCCeEEECCEEEEECCC
Confidence            345566677889999999999999888888899988775

YbbF/LpxH is an Escherichia coli UDP-2,3-diacylglucosamine hydrolase thought to catalyze the fourth step of lipid A biosynthesis, in which a precursor UDP-2,3-diacylglucosamine is hydrolyzed to yield 2,3-diacylglucosamine 1-phosphate and UMP. YbbF belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues l

>cd07410 MPP_CpdB_N Escherichia coli CpdB and related proteins, N-terminal metallophosphatase domain

Probab=98.74  E-value=1.4e-07  Score=78.43  Aligned_cols=73  Identities=19%  Similarity=0.210  Sum_probs=43.1

Q ss_pred             HHHHHHHHhhcCCCCeEEEEeccccccCCCCCChHHHHHHHHHHHHh-CCccEEEeCCcccceEE-eeCCeEEEEeC
Q 024595          129 LLKDVDGALKNSKAKWKIVVGHHTIKSAGHHGVTKELLLRLLPILEE-NNVDMYVNGHDHCLQHI-SSNGIEFLTSG  203 (265)
Q Consensus       129 Q~~wl~~~l~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~l~~~~~~-~~v~~vl~GH~H~~~~~-~~~~~~~i~~g  203 (265)
                      .+++..+.|++.+...+|+++|...........  ..+.....+.++ .+|+++++||+|..... ..+++..+.+|
T Consensus       171 ~~~~~v~~lr~~~~D~IIvl~H~g~~~~~~~~~--~~~~~~~~la~~~~~vD~IlgGHsH~~~~~~~~~~~~v~q~g  245 (277)
T cd07410         171 TAKKYVPKLRAEGADVVVVLAHGGFERDLEESL--TGENAAYELAEEVPGIDAILTGHQHRRFPGPTVNGVPVVQPG  245 (277)
T ss_pred             HHHHHHHHHHHcCCCEEEEEecCCcCCCccccc--CCccHHHHHHhcCCCCcEEEeCCCccccccCCcCCEEEEcCC
Confidence            355555556554567899999997654321101  001122344444 48999999999987654 33556555433

CpdB is a bacterial periplasmic protein with an N-terminal metallophosphatase domain and a C-terminal 3'-nucleotidase domain. This alignment model represents the N-terminal metallophosphatase domain, which has 2',3'-cyclic phosphodiesterase activity, hydrolyzing the 2',3'-cyclic phosphates of adenosine, guanosine, cytosine and uridine to yield nucleoside and phosphate. CpdB also hydrolyzes the chromogenic substrates p-nitrophenyl phosphate (PNPP), bis(PNPP) and p-nitrophenyl phosphorylcholine (NPPC). CpdB is thought to play a scavenging role during RNA hydrolysis by converting the non-transportable nucleotides produced by RNaseI to nucleosides which can easily enter a cell for use as a carbon source. This family also includes YfkN, a Bacillus subtilis nucleotide phosphoesterase with two copies of each of the metallophosphatase and 3'-nucleotidase domains. The N-terminal metallophos

>cd07406 MPP_CG11883_N Drosophila melanogaster CG11883 and related proteins, N-terminal metallophosphatase domain

Probab=98.71  E-value=1.5e-06  Score=71.30  Aligned_cols=56  Identities=23%  Similarity=0.439  Sum_probs=36.8

Q ss_pred             hhcCCCCeEEEEeccccccCCCCCChHHHHHHHHHHHHh-CCccEEEeCCcccceEEeeCCeEEEEeCCC
Q 024595          137 LKNSKAKWKIVVGHHTIKSAGHHGVTKELLLRLLPILEE-NNVDMYVNGHDHCLQHISSNGIEFLTSGGG  205 (265)
Q Consensus       137 l~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~l~~~~~~-~~v~~vl~GH~H~~~~~~~~~~~~i~~g~~  205 (265)
                      +.+.+...+|+++|.+...        .     ..++++ .+|+++|+||+|.......+++..+.+|+.
T Consensus       167 ~~~~~~D~iVvl~H~g~~~--------d-----~~la~~~~~iD~IlgGH~H~~~~~~~~~t~vv~~g~~  223 (257)
T cd07406         167 LREQGADLIIALTHMRLPN--------D-----KRLAREVPEIDLILGGHDHEYILVQVGGTPIVKSGSD  223 (257)
T ss_pred             HHhCCCCEEEEEeccCchh--------h-----HHHHHhCCCCceEEecccceeEeeeECCEEEEeCCcC
Confidence            3445677889999996421        1     123333 479999999999988555567666654433

CG11883 is an uncharacterized Drosophila melanogaster UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at th

>cd00844 MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-terminal metallophosphatase domain

Probab=98.66  E-value=2e-07  Score=76.17  Aligned_cols=164  Identities=16%  Similarity=0.142  Sum_probs=83.7

Q ss_pred             cCCCEEEecCCccCCCCCCCCCChh---------hhhhcccccC-CCCCCCceEEcCCCcccCCCccccccccccccCCC
Q 024595            8 LEIDFVISTGDNFYEDGLTGEEDPA---------FLDSFTSIYT-APSLQKQWYNVLGNHDYRGDVEAQLSPVLTRKDSR   77 (265)
Q Consensus         8 ~~pd~vv~~GD~~~~~g~~~~~~~~---------~~~~~~~~~~-~~~l~~p~~~i~GNHD~~~~~~~~~~~~~~~~~~~   77 (265)
                      .++|+||++||+.- ..  ...+.+         ....|...+. ....++|+++|.||||-...... +    .  ...
T Consensus        27 ~~~D~lI~~GDf~~-~~--~~~d~~~~~~p~k~~~~~~f~~~~~g~~~~p~~t~fi~GNHE~~~~l~~-l----~--~gg   96 (262)
T cd00844          27 TKVDLLICCGDFQA-VR--NEADLKCMAVPPKYRKMGDFYKYYSGEKKAPILTIFIGGNHEASNYLWE-L----P--YGG   96 (262)
T ss_pred             CCCcEEEEcCCCCC-cC--CcchhhhhccchhhhhhhhHHHHhcCCccCCeeEEEECCCCCCHHHHHh-h----c--CCC
Confidence            47999999999751 11  111110         0111222222 23367889999999995332211 0    0  122


Q ss_pred             ceeeeeeE------ecCceEEEEEEeCccccccccCCCCCCCCCccccchhhhhHHHHHHHHH-------HHhhcCCCCe
Q 024595           78 WLCSRSFI------LDAEIAEFVFVDTTPFVDEYFEDPGDSTYDWRGVYRRKEYLSDLLKDVD-------GALKNSKAKW  144 (265)
Q Consensus        78 ~~~~~~y~------~~~~~~~~i~lds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~~wl~-------~~l~~~~~~~  144 (265)
                      |..++-|.      +...+++|..|....-...+.... .....+         .++++..+-       ..|.......
T Consensus        97 ~v~~Ni~~Lg~~~v~~~~GlrIaGLsG~~~~~~~~~~~-~~~~~~---------t~~~~rs~y~~r~~~~~kl~~~~~~v  166 (262)
T cd00844          97 WVAPNIYYLGYAGVVNFGGLRIAGLSGIYKSHDYRKGH-FERPPY---------SEDTKRSAYHVRNIEVFKLKQLKQPI  166 (262)
T ss_pred             eecCcEEEecCCCEEEECCeEEEEeccccccccccccc-ccCCCC---------CHHHHHHhhhhhHHHHHHHHhcCCCC
Confidence            33332222      334678888886643211111000 000111         122222210       1122223345


Q ss_pred             EEEEeccccccCCCCCChHH----------------H-HHHHHHHHHhCCccEEEeCCcccceE
Q 024595          145 KIVVGHHTIKSAGHHGVTKE----------------L-LLRLLPILEENNVDMYVNGHDHCLQH  191 (265)
Q Consensus       145 ~iv~~H~P~~~~~~~~~~~~----------------~-~~~l~~~~~~~~v~~vl~GH~H~~~~  191 (265)
                      =|+++|.|+.....++....                . ...+..++++.+.++.|+||.|....
T Consensus       167 DIlLSHdWP~gI~~~~~~~~l~~~~~~~~~~~~~~~~Gs~~~~~ll~~lkPryhf~gH~H~~f~  230 (262)
T cd00844         167 DIFLSHDWPRGIYKHGDKKQLLRKKPFFRQDIESGTLGSPAAEELLKHLKPRYWFSAHLHVKFA  230 (262)
T ss_pred             cEEEeCCCCcchhhccchHHhhhcCccchhcccccCCCCHHHHHHHHHhCCCEEEEecCCcccc
Confidence            69999999988765444211                0 13466788889999999999999554

Dbr1 is an RNA lariat debranching enzyme that hydrolyzes 2'-5' phosphodiester bonds at the branch points of excised intron lariats. This alignment model represents the N-terminal metallophosphatase domain of Dbr1. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal s

>TIGR00619 sbcd exonuclease SbcD

Probab=98.55  E-value=1.4e-07  Score=77.16  Aligned_cols=54  Identities=22%  Similarity=0.284  Sum_probs=32.8

Q ss_pred             cccccCCCEEEecCCccCCCCCCCCCC-hhhhhhcccccCCCCCC-CceEEcCCCcccCC
Q 024595            4 IGEKLEIDFVISTGDNFYEDGLTGEED-PAFLDSFTSIYTAPSLQ-KQWYNVLGNHDYRG   61 (265)
Q Consensus         4 ~~~~~~pd~vv~~GD~~~~~g~~~~~~-~~~~~~~~~~~~~~~l~-~p~~~i~GNHD~~~   61 (265)
                      .+.+++||+|+++||++. ...++... ..+.+.+..+   .... +|+++|+||||...
T Consensus        34 ~~~~~~~D~lli~GDi~d-~~~p~~~~~~~~~~~l~~l---~~~~~i~v~~i~GNHD~~~   89 (253)
T TIGR00619        34 FAKAEQIDALLVAGDVFD-TANPPAEAQELFNAFFRNL---SDANPIPIVVISGNHDSAQ   89 (253)
T ss_pred             HHHHcCCCEEEECCccCC-CCCCCHHHHHHHHHHHHHH---HhcCCceEEEEccCCCChh
Confidence            456679999999999984 32221110 1112222222   1233 89999999999854

This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).

>KOG3770 consensus Acid sphingomyelinase and PHM5 phosphate metabolism protein [Lipid transport and metabolism]

Probab=98.49  E-value=5e-07  Score=79.63  Aligned_cols=172  Identities=19%  Similarity=0.213  Sum_probs=90.0

Q ss_pred             ccccC-CCEEEecCCccCCCCCCCCCChhhh--hhcccccCCCCCCCceEEcCCCcccCCC--cc-----cc--cccccc
Q 024595            5 GEKLE-IDFVISTGDNFYEDGLTGEEDPAFL--DSFTSIYTAPSLQKQWYNVLGNHDYRGD--VE-----AQ--LSPVLT   72 (265)
Q Consensus         5 ~~~~~-pd~vv~~GD~~~~~g~~~~~~~~~~--~~~~~~~~~~~l~~p~~~i~GNHD~~~~--~~-----~~--~~~~~~   72 (265)
                      .+..+ +|+|+.+||++-.+.+.-..+..+.  ..+...+..---.+|+|+..||||....  +.     ..  ...++.
T Consensus       205 ke~~~~iD~I~wTGD~~~H~~w~~t~~~~l~~~~~l~~~~~e~FpdvpvypalGNhe~~P~N~F~~~~~~~~~~~~wly~  284 (577)
T KOG3770|consen  205 KENHKDIDYIIWTGDNVAHDVWAQTEEENLSMLSRLTSLLSEYFPDVPVYPALGNHEIHPVNLFAPGSVPKRHSQLWLYK  284 (577)
T ss_pred             HhcCCCCCEEEEeCCCCcccchhhhHHHHHHHHHHHHHHHHHhCCCCceeeecccCCCCcHhhcCCCCCcchhhhhHHHH
Confidence            44455 9999999998832222110101000  0011111111127999999999997531  00     00  000011


Q ss_pred             cc---CCCce---------eeeeeE-ecCceEEEEEEeCccccc-cccCCCCCCCCCccccchhhhhHHHHHHHHHHHhh
Q 024595           73 RK---DSRWL---------CSRSFI-LDAEIAEFVFVDTTPFVD-EYFEDPGDSTYDWRGVYRRKEYLSDLLKDVDGALK  138 (265)
Q Consensus        73 ~~---~~~~~---------~~~~y~-~~~~~~~~i~lds~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~Q~~wl~~~l~  138 (265)
                      ..   -..|+         .+.+|. ...++.++|.||+..... +++...       +...     -.+|++|+..+|.
T Consensus       285 ~~~~~W~~wlp~e~~~t~~kga~Y~~~~~~Glr~IslNt~~c~~~N~~L~~-------n~td-----p~~~lqWf~~~L~  352 (577)
T KOG3770|consen  285 HLAGAWSTWLPAEAKETFLKGAYYLVLVIDGLRLISLNTNYCSAPNFWLYA-------NQTD-----PIDQLQWFVDQLQ  352 (577)
T ss_pred             HHHhhhhccCCHHHHhhhhcCcEEEEeecCCceEEEeccccccccceeeee-------cCCC-----chHHhhHHHHHHH
Confidence            11   12232         123454 335899999999986422 111111       1111     1367999999998


Q ss_pred             cC--CCCeEEEEeccccccCC-CCCChHHHHHHHHHHHHhC--CccEEEeCCcccceEE
Q 024595          139 NS--KAKWKIVVGHHTIKSAG-HHGVTKELLLRLLPILEEN--NVDMYVNGHDHCLQHI  192 (265)
Q Consensus       139 ~~--~~~~~iv~~H~P~~~~~-~~~~~~~~~~~l~~~~~~~--~v~~vl~GH~H~~~~~  192 (265)
                      .+  ....+=++.|.|+-... ..+..    ..+..++.++  -|...+.||+|.....
T Consensus       353 ~ae~~GekVhil~HIPpG~~~c~~~ws----~~f~~iv~r~~~tI~gqf~GH~h~d~f~  407 (577)
T KOG3770|consen  353 EAESAGEKVHILGHIPPGDGVCLEGWS----INFYRIVNRFRSTIAGQFYGHTHIDEFR  407 (577)
T ss_pred             HHHhcCCEEEEEEeeCCCCcchhhhhh----HHHHHHHHHHHHhhhhhccccCcceeEE
Confidence            74  45566799999985422 12222    2233444443  2567799999998744

>COG2908 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=98.45  E-value=6.3e-08  Score=76.25  Aligned_cols=40  Identities=20%  Similarity=0.257  Sum_probs=33.3

Q ss_pred             HHHHHHHHhCCccEEEeCCcccceEEeeCCeEEEEeCCCC
Q 024595          167 LRLLPILEENNVDMYVNGHDHCLQHISSNGIEFLTSGGGS  206 (265)
Q Consensus       167 ~~l~~~~~~~~v~~vl~GH~H~~~~~~~~~~~~i~~g~~~  206 (265)
                      +.....+.+++|+.+++||+|.......+++.|++.|+.-
T Consensus       177 ~~v~~~~~~~~vd~vI~GH~Hr~ai~~i~~~~yi~lGdW~  216 (237)
T COG2908         177 AAVADEARRHGVDGVIHGHTHRPAIHNIPGITYINLGDWV  216 (237)
T ss_pred             HHHHHHHHHcCCCEEEecCcccHhhccCCCceEEecCcch
Confidence            4456677889999999999999998888889999877553

>cd07411 MPP_SoxB_N Thermus thermophilus SoxB and related proteins, N-terminal metallophosphatase domain

Probab=98.37  E-value=1.9e-05  Score=65.08  Aligned_cols=57  Identities=14%  Similarity=0.297  Sum_probs=34.3

Q ss_pred             HHHhhcCCCCeEEEEeccccccCCCCCChHHHHHHHHHHHHh-CCccEEEeCCcccceEEe---eCCeEEEEeC
Q 024595          134 DGALKNSKAKWKIVVGHHTIKSAGHHGVTKELLLRLLPILEE-NNVDMYVNGHDHCLQHIS---SNGIEFLTSG  203 (265)
Q Consensus       134 ~~~l~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~l~~~~~~-~~v~~vl~GH~H~~~~~~---~~~~~~i~~g  203 (265)
                      .+.+.+.+...+|+++|.+...        +     ..+.++ .+|+++|+||+|......   .+++..+.+|
T Consensus       176 ~~~~~~~~~D~iI~l~H~g~~~--------~-----~~la~~~~~iDlilgGH~H~~~~~~~~~~~~t~v~~~g  236 (264)
T cd07411         176 VKLRREEGVDVVVLLSHNGLPV--------D-----VELAERVPGIDVILSGHTHERTPKPIIAGGGTLVVEAG  236 (264)
T ss_pred             HHHHHhCCCCEEEEEecCCchh--------h-----HHHHhcCCCCcEEEeCcccccccCcccccCCEEEEEcC
Confidence            3333344667889999986421        1     122333 479999999999765322   2556555443

SoxB (sulfur oxidation protein B) is a periplasmic thiosulfohydrolase and an essential component of the sulfur oxidation pathway in archaea and bacteria. SoxB has a dinuclear manganese cluster and is thought to catalyze the release of sulfate from a protein-bound cysteine S-thiosulfonate. SoxB is expressed from the sox (sulfur oxidation) gene cluster, which encodes 15 other sox genes, and has two domains, an N-terminal metallophosphatase domain and a C-terminal 5'-nucleotidase domain. SoxB binds the SoxYZ complex and is thought to function as a sulfate-thiohydrolase. SoxB is closely related to the UshA, YchR, and CpdB proteins, all of which have the same two-domain architecture. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzy

>cd00845 MPP_UshA_N_like Escherichia coli UshA-like family, N-terminal metallophosphatase domain

Probab=98.30  E-value=1.4e-05  Score=65.36  Aligned_cols=51  Identities=25%  Similarity=0.373  Sum_probs=32.9

Q ss_pred             CCCCeEEEEeccccccCCCCCChHHHHHHHHHHHHh-CCccEEEeCCcccceEE--eeCCeEEEEeC
Q 024595          140 SKAKWKIVVGHHTIKSAGHHGVTKELLLRLLPILEE-NNVDMYVNGHDHCLQHI--SSNGIEFLTSG  203 (265)
Q Consensus       140 ~~~~~~iv~~H~P~~~~~~~~~~~~~~~~l~~~~~~-~~v~~vl~GH~H~~~~~--~~~~~~~i~~g  203 (265)
                      .+...+|+++|.+...          ..   .++++ .++++|++||+|.....  ..+++..+.+|
T Consensus       169 ~~~D~vIvl~H~g~~~----------~~---~la~~~~giDlvlggH~H~~~~~~~~~~~~~v~~~g  222 (252)
T cd00845         169 EGADVIILLSHLGLDD----------DE---ELAEEVPGIDVILGGHTHHLLEEPEVVNGTLIVQAG  222 (252)
T ss_pred             CCCCEEEEEeccCccc----------hH---HHHhcCCCccEEEcCCcCcccCCCcccCCEEEEeCC
Confidence            4567889999987542          11   12222 58999999999987643  23566655433

This family includes the bacterial enzyme UshA, and related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich

>cd07408 MPP_SA0022_N Staphylococcus aureus SA0022 and related proteins, N-terminal metallophosphatase domain

Probab=98.25  E-value=5.3e-05  Score=62.21  Aligned_cols=61  Identities=20%  Similarity=0.320  Sum_probs=36.8

Q ss_pred             HHHhhcCCCCeEEEEeccccccCCCCCChHHHHHHHHHHHHh-CCccEEEeCCcccceEEe---eCCeEEEE
Q 024595          134 DGALKNSKAKWKIVVGHHTIKSAGHHGVTKELLLRLLPILEE-NNVDMYVNGHDHCLQHIS---SNGIEFLT  201 (265)
Q Consensus       134 ~~~l~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~l~~~~~~-~~v~~vl~GH~H~~~~~~---~~~~~~i~  201 (265)
                      ...+.+.+...+|+++|.+.........    ..   .+.++ .+++++|.||+|......   .+++..+.
T Consensus       164 v~~l~~~~~D~iIvl~H~G~~~~~~~~~----~~---~la~~~~giDvIigGH~H~~~~~~~~~~~~~~ivq  228 (257)
T cd07408         164 VAALKAKGADVIVALGHLGVDRTSSPWT----ST---ELAANVTGIDLIIDGHSHTTIEIGKKDGNNVLLTQ  228 (257)
T ss_pred             HHHHHhCCCCEEEEEeCcCcCCCCCCcc----HH---HHHHhCCCceEEEeCCCcccccCcccccCCeEEEc
Confidence            4444445677899999997654321111    11   22323 479999999999987543   24554443

SA0022 is an uncharacterized Staphylococcus aureus UshA-like protein with two putative domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. SA0022 also contains a putative C-terminal cell wall anchor domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet

>KOG3662 consensus Cell division control protein/predicted DNA repair exonuclease [Replication, recombination and repair]

Probab=98.24  E-value=1.2e-06  Score=74.66  Aligned_cols=91  Identities=22%  Similarity=0.276  Sum_probs=54.8

Q ss_pred             ccCCCEEEecCCccCCCCCCCCCChhhhhhc---ccccCCCCCCCceEEcCCCcccCCCccccccccccccCCCceeeee
Q 024595            7 KLEIDFVISTGDNFYEDGLTGEEDPAFLDSF---TSIYTAPSLQKQWYNVLGNHDYRGDVEAQLSPVLTRKDSRWLCSRS   83 (265)
Q Consensus         7 ~~~pd~vv~~GD~~~~~g~~~~~~~~~~~~~---~~~~~~~~l~~p~~~i~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~   83 (265)
                      -.+||.++++||++. .|.- ..+++|.+.+   ..++. .+..+|++.++||||.+... +........... ...+..
T Consensus        91 ~lkPdvvffLGDLfD-eG~~-~~~eEf~~~~~RfkkIf~-~k~~~~~~~i~GNhDIGf~~-~~~~~~i~Rfe~-~fg~~~  165 (410)
T KOG3662|consen   91 RLKPDVVFFLGDLFD-EGQW-AGDEEFKKRYERFKKIFG-RKGNIKVIYIAGNHDIGFGN-ELIPEWIDRFES-VFGPTE  165 (410)
T ss_pred             ccCCCEEEEeccccc-cCcc-CChHHHHHHHHHHHHhhC-CCCCCeeEEeCCcccccccc-ccchhHHHHHHH-hhcchh
Confidence            369999999999993 3422 2345665544   44443 23579999999999996532 111110000000 111233


Q ss_pred             eEecCceEEEEEEeCcccc
Q 024595           84 FILDAEIAEFVFVDTTPFV  102 (265)
Q Consensus        84 y~~~~~~~~~i~lds~~~~  102 (265)
                      ..++.++..|+++|+....
T Consensus       166 r~f~v~~~tf~~~d~~~ls  184 (410)
T KOG3662|consen  166 RRFDVGNLTFVMFDSNALS  184 (410)
T ss_pred             hhhccCCceeEEeeehhhc
Confidence            4577788899999988754

>cd07412 MPP_YhcR_N Bacillus subtilis YhcR endonuclease and related proteins, N-terminal metallophosphatase domain

Probab=98.23  E-value=2.3e-05  Score=65.47  Aligned_cols=73  Identities=18%  Similarity=0.183  Sum_probs=40.9

Q ss_pred             HHHhhcCCCCeEEEEeccccccCCCCCChHHHHHHHHHHHHh--CCccEEEeCCcccceEE---eeCCeEEEEeCCCC
Q 024595          134 DGALKNSKAKWKIVVGHHTIKSAGHHGVTKELLLRLLPILEE--NNVDMYVNGHDHCLQHI---SSNGIEFLTSGGGS  206 (265)
Q Consensus       134 ~~~l~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~l~~~~~~--~~v~~vl~GH~H~~~~~---~~~~~~~i~~g~~~  206 (265)
                      .+.|++.+...+|+++|.................+...++.+  .+++++++||+|.....   ..+++..+.+|+-+
T Consensus       184 v~~lr~~~~D~IIvL~H~G~~~~~~~~~~~~~~~~~~~l~~~~~~~iD~IlgGHsH~~~~~~~~~~~~~~v~q~g~~g  261 (288)
T cd07412         184 APELKAGGVDAIVVLAHEGGSTKGGDDTCSAASGPIADIVNRLDPDVDVVFAGHTHQAYNCTVPAGNPRLVTQAGSYG  261 (288)
T ss_pred             HHHHHHCCCCEEEEEeCCCCCCCCCCccccccChhHHHHHhhcCCCCCEEEeCccCccccccccCcCCEEEEecChhh
Confidence            334444456778899998764322211100001122334444  37999999999998755   23666666554333

YhcR is a Bacillus subtilis sugar-nonspecific endonuclease. It cleaves endonucleolytically to yield nucleotide 3'-monophosphate products, similar to Staphylococcus aureus micrococcal nuclease. YhcR appears to be located in the cell wall, and is thought to be a substrate for a Bacillus subtilis sortase. YhcR is the major calcium-activated nuclease of B. subtilis. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated wi

>cd07386 MPP_DNA_pol_II_small_archeal_C archeal DNA polymerase II, small subunit, C-terminal metallophosphatase domain

Probab=98.03  E-value=3.2e-05  Score=62.96  Aligned_cols=32  Identities=22%  Similarity=0.234  Sum_probs=26.6

Q ss_pred             CccEEEeCCcccceEEeeCCeEEEEeCCCCCC
Q 024595          177 NVDMYVNGHDHCLQHISSNGIEFLTSGGGSKA  208 (265)
Q Consensus       177 ~v~~vl~GH~H~~~~~~~~~~~~i~~g~~~~~  208 (265)
                      ..+++++||.|........++.++..|+....
T Consensus       191 ~p~vii~Gh~h~~~~~~~~~~~~vn~Gsf~~~  222 (243)
T cd07386         191 VPDILHTGHVHVYGVGVYRGVLLVNSGTWQSQ  222 (243)
T ss_pred             CCCEEEECCCCchHhEEECCEEEEECCCCcCC
Confidence            56899999999998887789999988776543

The small subunit of the archeal DNA polymerase II contains a C-terminal metallophosphatase domain. This domain is thought to be functionally active because the active site residues required for phosphoesterase activity in other members of this superfamily are intact. The archeal replicative DNA polymerases are thought to possess intrinsic phosphatase activity that hydrolyzes the pyrophosphate released during nucleotide polymerization. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiestera

>KOG2310 consensus DNA repair exonuclease MRE11 [Replication, recombination and repair]

Probab=97.99  E-value=2.9e-05  Score=67.72  Aligned_cols=86  Identities=17%  Similarity=0.147  Sum_probs=46.8

Q ss_pred             eEEEEeccccccCCCCCChHHHHHHHHHHHHhCCccEEEeCCcccceEEee--CCeEEEEeCCCCCCCCCCCCCCCCccc
Q 024595          144 WKIVVGHHTIKSAGHHGVTKELLLRLLPILEENNVDMYVNGHDHCLQHISS--NGIEFLTSGGGSKAWRGDRNWWSPEEL  221 (265)
Q Consensus       144 ~~iv~~H~P~~~~~~~~~~~~~~~~l~~~~~~~~v~~vl~GH~H~~~~~~~--~~~~~i~~g~~~~~~~~~~~~~~~~~~  221 (265)
                      +.+++.|..-   ..|+.+.-+.+.|++-+    .++|+.||.|-......  ..-.|.+...|+....+.++    .+ 
T Consensus       212 FNllvlHQNr---~~h~~tn~lpE~flp~F----~DlviWGHEHEC~i~p~~n~~~~F~i~QPGSsVaTSL~~----gE-  279 (646)
T KOG2310|consen  212 FNLLVLHQNR---SKHRPTNFLPEQFLPDF----LDLVIWGHEHECKIDPQYNAIQGFYILQPGSSVATSLSP----GE-  279 (646)
T ss_pred             eeeEEEeecc---cCCCCcccCcHhHhhhh----hhheeeccccccccCcccccccceeeecCCCccccccCc----cc-
Confidence            4688888753   22333323334444433    48999999998765433  22235555555544333332    11 


Q ss_pred             eeeecCCCeEEEEEeCCeEEEEE
Q 024595          222 KLYYDGQGFMSVKMTRSEAVVLF  244 (265)
Q Consensus       222 ~~~~~~~gy~~~~v~~~~i~~~~  244 (265)
                         .......++.|.+.+++.+-
T Consensus       280 ---a~~Khv~lL~Ikg~~~~l~~  299 (646)
T KOG2310|consen  280 ---AKPKHVGLLRIKGRKFKLEK  299 (646)
T ss_pred             ---ccCceEEEEEecCCcccccc
Confidence               12446678888876555443

>cd07407 MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and related proteins, N-terminal metallophosphatase domain

Probab=97.97  E-value=0.00028  Score=58.62  Aligned_cols=70  Identities=20%  Similarity=0.218  Sum_probs=41.4

Q ss_pred             HHHHHHhhcCCCCeEEEEeccccccCCCCCChHHHHHHHHHHHHhC-Ccc-EEEeCCcccceEEee-CCeEEEEeCCCC
Q 024595          131 KDVDGALKNSKAKWKIVVGHHTIKSAGHHGVTKELLLRLLPILEEN-NVD-MYVNGHDHCLQHISS-NGIEFLTSGGGS  206 (265)
Q Consensus       131 ~wl~~~l~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~l~~~~~~~-~v~-~vl~GH~H~~~~~~~-~~~~~i~~g~~~  206 (265)
                      .|+.+.|++.+...+|+++|..+....   ...+..+   .+.++. +++ ++++||+|....... +++..+..|.-+
T Consensus       177 ~~v~~~l~~~~~DvIIvlsH~G~~~d~---~~~~~~~---~la~~~~~id~~Ii~GHsH~~~~~~~~~~~~ivq~G~~g  249 (282)
T cd07407         177 PWFQDAINNEDVDLILVLGHMPVRDDA---EFKVLHD---AIRKIFPDTPIQFLGGHSHVRDFTQYDSSSTGLESGRYL  249 (282)
T ss_pred             HHHHHHHHhcCCCEEEEEeCCCCCCCc---cHHHHHH---HHHHhCCCCCEEEEeCCcccccceeccCcEEEEeccchh
Confidence            588777775567789999999764331   1111111   233333 567 799999997644333 566555544433

YHR202W is an uncharacterized Saccharomyces cerevisiae UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at

>KOG3325 consensus Membrane coat complex Retromer, subunit VPS29/PEP11 [Intracellular trafficking, secretion, and vesicular transport]

Probab=97.94  E-value=0.00022  Score=51.87  Aligned_cols=102  Identities=21%  Similarity=0.360  Sum_probs=70.4

Q ss_pred             CCeEEEEeccc-cccCCCCCChHHHHHHHHHHHHhCCccEEEeCCcccceEEeeCCeEEEEeCCCCCCCCCCCCCCCCcc
Q 024595          142 AKWKIVVGHHT-IKSAGHHGVTKELLLRLLPILEENNVDMYVNGHDHCLQHISSNGIEFLTSGGGSKAWRGDRNWWSPEE  220 (265)
Q Consensus       142 ~~~~iv~~H~P-~~~~~~~~~~~~~~~~l~~~~~~~~v~~vl~GH~H~~~~~~~~~~~~i~~g~~~~~~~~~~~~~~~~~  220 (265)
                      ..++|=+.|.. +.+   +++.    +.|.-+.++.+|++.+.||+|....+..+|--|+.-|++.+.+...-    .+ 
T Consensus        78 GqfkIG~chGhqViP---~gd~----~sL~~LaRqldvDILl~G~Th~f~Aye~eg~ffvnPGSaTGAfn~~~----t~-  145 (183)
T KOG3325|consen   78 GQFKIGLCHGHQVIP---WGDP----ESLALLARQLDVDILLTGHTHKFEAYEHEGKFFVNPGSATGAFNVSD----TD-  145 (183)
T ss_pred             ccEEEEeecCcEeec---CCCH----HHHHHHHHhcCCcEEEeCCceeEEEEEeCCcEEeCCCcccCCCcccc----cC-
Confidence            45667666642 222   2332    33445566679999999999999999999999998887765542111    00 


Q ss_pred             ceeeecCCCeEEEEEeCCeEEEEEEe-cCCCe-EEEEEccC
Q 024595          221 LKLYYDGQGFMSVKMTRSEAVVLFYD-VHGNI-LHKWSIPK  259 (265)
Q Consensus       221 ~~~~~~~~gy~~~~v~~~~i~~~~~~-~~g~~-~~~~~i~~  259 (265)
                          ...+.|+++++.+..+.+..|. .+|++ ++++...|
T Consensus       146 ----~~~PSFvLmDiqg~~~v~YvY~lidgeVkVdki~ykK  182 (183)
T KOG3325|consen  146 ----IIVPSFVLMDIQGSTVVTYVYRLIDGEVKVDKIEYKK  182 (183)
T ss_pred             ----CCCCceEEEEecCCEEEEEEeeeeCCcEEEEEEEecC
Confidence                1467999999999988888887 78877 66666554

>PRK04036 DNA polymerase II small subunit; Validated

Probab=97.92  E-value=8.6e-05  Score=66.71  Aligned_cols=30  Identities=23%  Similarity=0.303  Sum_probs=25.9

Q ss_pred             ccEEEeCCcccceEEeeCCeEEEEeCCCCC
Q 024595          178 VDMYVNGHDHCLQHISSNGIEFLTSGGGSK  207 (265)
Q Consensus       178 v~~vl~GH~H~~~~~~~~~~~~i~~g~~~~  207 (265)
                      .+++++||.|.+......++.++++|+...
T Consensus       441 Pdv~~~GH~H~~~~~~~~g~~~IN~gsf~~  470 (504)
T PRK04036        441 PDIFHTGHVHINGYGKYRGVLLINSGTWQA  470 (504)
T ss_pred             CCEEEeCCCCccceEEECCEEEEECCcccc
Confidence            589999999999888889999999887654

>KOG2863 consensus RNA lariat debranching enzyme [RNA processing and modification]

Probab=97.91  E-value=6.4e-05  Score=62.49  Aligned_cols=171  Identities=18%  Similarity=0.221  Sum_probs=88.0

Q ss_pred             cCCCEEEecCCccC-CCC--CCCCCC-h--hhhhhcccccC-CCCCCCceEEcCCCcccCCCccccccccccccCCCcee
Q 024595            8 LEIDFVISTGDNFY-EDG--LTGEED-P--AFLDSFTSIYT-APSLQKQWYNVLGNHDYRGDVEAQLSPVLTRKDSRWLC   80 (265)
Q Consensus         8 ~~pd~vv~~GD~~~-~~g--~~~~~~-~--~~~~~~~~~~~-~~~l~~p~~~i~GNHD~~~~~~~~~~~~~~~~~~~~~~   80 (265)
                      .++|+++++||.-- .++  ..+..- +  +....|-..++ .....+|.++|-||||..+.. ..+.|      +.|.-
T Consensus        29 tkVDLLlccGDFQavRn~~D~~siavPpKy~~m~~F~~YYsge~~APVlTIFIGGNHEAsnyL-~eLpy------GGwVA  101 (456)
T KOG2863|consen   29 TKVDLLLCCGDFQAVRNEQDLKSIAVPPKYRRMGDFYKYYSGEIKAPVLTIFIGGNHEASNYL-QELPY------GGWVA  101 (456)
T ss_pred             CCccEEEEccchHhhcchhhcccccCCHHHHHHHHHHHHhCCcccCceeEEEecCchHHHHHH-Hhccc------Cceec
Confidence            48999999999531 111  001111 1  11223333443 234579999999999975432 22222      33543


Q ss_pred             eeeeE------ecCceEEEEEEeCccccccccCCCCCCCCCccccc---hhhhhHHHHHHHHHHHhhcCCCCeEEEEecc
Q 024595           81 SRSFI------LDAEIAEFVFVDTTPFVDEYFEDPGDSTYDWRGVY---RRKEYLSDLLKDVDGALKNSKAKWKIVVGHH  151 (265)
Q Consensus        81 ~~~y~------~~~~~~~~i~lds~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Q~~wl~~~l~~~~~~~~iv~~H~  151 (265)
                      |+-|+      +..+++|+-.+-...-...|..    ...+|....   =+..+-..+.+=  ..|...+.+-=|+++|.
T Consensus       102 pNIyYlG~agVv~~~gvRIggiSGI~k~~dy~k----gh~E~ppyn~stiRsiYHvR~~dV--~~Lkqlk~piDIfLSHD  175 (456)
T KOG2863|consen  102 PNIYYLGYAGVVNFGGVRIGGISGIYKEHDYRK----GHFEWPPYNNSTIRSIYHVRISDV--AKLKQLKHPIDIFLSHD  175 (456)
T ss_pred             cceEEeeecceEEECCEEEeeccchhhhhhccc----CCCCCCCccchhhhhhhhhhhhhh--HHHHhhcCcceEEeecC
Confidence            43333      4457888877755432211110    011110000   011111122221  12223344455888888


Q ss_pred             ccccCCCCCChHHHH-----------------HHHHHHHHhCCccEEEeCCcccceE
Q 024595          152 TIKSAGHHGVTKELL-----------------LRLLPILEENNVDMYVNGHDHCLQH  191 (265)
Q Consensus       152 P~~~~~~~~~~~~~~-----------------~~l~~~~~~~~v~~vl~GH~H~~~~  191 (265)
                      =+.+...+|+..++.                 ..+..+|++.+..++++.|.|+-..
T Consensus       176 WP~GI~~yGd~~~LLr~KPFFrqeie~~~LGSp~~~eLL~~LkP~yWfsAHLH~KFa  232 (456)
T KOG2863|consen  176 WPRGIYYYGDKKQLLRLKPFFRQEIEEGKLGSPALEELLEDLKPQYWFSAHLHVKFA  232 (456)
T ss_pred             CCcchhhcCCHHHHHhcCcHHHHHHhcCCcCChHHHHHHHHhCcchhhhhhHhhHHh
Confidence            777766666654321                 2346788888999999999998654

>cd07391 MPP_PF1019 Pyrococcus furiosus PF1019 and related proteins, metallophosphatase domain

Probab=97.88  E-value=7.3e-06  Score=63.07  Aligned_cols=55  Identities=16%  Similarity=0.018  Sum_probs=33.5

Q ss_pred             ccccccCCCEEEecCCccCCCCCCCCCChhhhhhcccccCCCCCCCceEEcCCCcccCC
Q 024595            3 LIGEKLEIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQKQWYNVLGNHDYRG   61 (265)
Q Consensus         3 ~~~~~~~pd~vv~~GD~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~p~~~i~GNHD~~~   61 (265)
                      +.+++.+||.||++||+++.....  . ........ .......++|+++++||||...
T Consensus        35 ~~~~~~~~d~lii~GDl~~~~~~~--~-~~~~~~~~-~~~~~~~~~~v~~i~GNHD~~~   89 (172)
T cd07391          35 RLIEEYGPERLIILGDLKHSFGGL--S-RQEFEEVA-FLRLLAKDVDVILIRGNHDGGL   89 (172)
T ss_pred             HHHHhcCCCEEEEeCccccccccc--C-HHHHHHHH-HHHhccCCCeEEEEcccCccch
Confidence            345668999999999999533211  1 11111111 1112235789999999999743

This family includes bacterial and archeal proteins homologous to PF1019, an uncharacterized Pyrococcus furiosus protein. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for pro

>cd07405 MPP_UshA_N Escherichia coli UshA and related proteins, N-terminal metallophosphatase domain

Probab=97.87  E-value=0.0011  Score=55.26  Aligned_cols=55  Identities=24%  Similarity=0.279  Sum_probs=31.8

Q ss_pred             hhcCCCCeEEEEeccccccCCCCCChHHHHHHHHHHHHhCCccEEEeCCcccceE
Q 024595          137 LKNSKAKWKIVVGHHTIKSAGHHGVTKELLLRLLPILEENNVDMYVNGHDHCLQH  191 (265)
Q Consensus       137 l~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~l~~~~~~~~v~~vl~GH~H~~~~  191 (265)
                      |++.....+|+++|.........+........+.+.+...++++++.||+|....
T Consensus       169 lk~~~~D~VI~lsH~G~~~~~~~~~~~~~~~~lA~~~~~~giD~IigGHsH~~~~  223 (285)
T cd07405         169 LKQEKPDIVIAATHMGHYDNGEHGSNAPGDVEMARALPAGGLDLIVGGHSQDPVC  223 (285)
T ss_pred             HHHcCCCEEEEEecccccCCccccccCchHHHHHHhcCCCCCCEEEeCCCCcccc
Confidence            4444567889999997643322111101112233333225899999999999764

UshA is a bacterial periplasmic enzyme with UDP-sugar hydrolase and dinucleoside-polyphosphate hydrolase activities associated with its N-terminal metallophosphatase domain, and 5'-nucleotidase activity associated with its C-terminal domain. UshA has been studied in Escherichia coli where it is expressed from the ushA gene as an immature precursor and proteolytically cleaved to form a mature product upon export to the periplasm. UshA hydrolyzes many different nucleotides and nucleotide derivitives and has been shown to degrade external UDP-glucose to uridine, glucose 1-phosphate and phosphate for utilization by the cell. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs

>cd07424 MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase domain

Probab=97.80  E-value=9.9e-05  Score=58.58  Aligned_cols=31  Identities=19%  Similarity=0.363  Sum_probs=24.8

Q ss_pred             CccEEEeCCcccceEEeeCCeEEEEeCCCCC
Q 024595          177 NVDMYVNGHDHCLQHISSNGIEFLTSGGGSK  207 (265)
Q Consensus       177 ~v~~vl~GH~H~~~~~~~~~~~~i~~g~~~~  207 (265)
                      +.+++++||+|.......++...+.+|+.+.
T Consensus       168 ~~~~iV~GHTh~~~~~~~~~~i~ID~Gsv~g  198 (207)
T cd07424         168 GVDAVVHGHTPVKRPLRLGNVLYIDTGAVFD  198 (207)
T ss_pred             CCCEEEECCCCCCcceEECCEEEEECCCCCC
Confidence            3578999999998876677888888887653

PrpA and PrpB are bacterial type I serine/threonine and tyrosine phosphatases thought to modulate the expression of proteins that protect the cell upon accumulation of misfolded proteins in the periplasm. The PPP (phosphoprotein phosphatase) family, to which PrpA and PrpB belong, is one of two known protein phosphatase families specific for serine and threonine. This family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all

>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed

Probab=97.68  E-value=0.0006  Score=67.55  Aligned_cols=62  Identities=19%  Similarity=0.197  Sum_probs=39.1

Q ss_pred             CCCCeEEEEeccccccCCCCCChHHHHHHHHHHHHhC-CccEEEeCCcccceEEeeCCeEEEEeCCCC
Q 024595          140 SKAKWKIVVGHHTIKSAGHHGVTKELLLRLLPILEEN-NVDMYVNGHDHCLQHISSNGIEFLTSGGGS  206 (265)
Q Consensus       140 ~~~~~~iv~~H~P~~~~~~~~~~~~~~~~l~~~~~~~-~v~~vl~GH~H~~~~~~~~~~~~i~~g~~~  206 (265)
                      .+...+|+++|.........+     ......+.++. +|++++.||+|.......+++..+.+|+.+
T Consensus       837 ~~~D~VV~LsH~G~~~d~~~~-----~~~~~~lA~~v~gIDvIigGHsH~~~~~~v~~~~ivqag~~g  899 (1163)
T PRK09419        837 EKVDAIIALTHLGSNQDRTTG-----EITGLELAKKVKGVDAIISAHTHTLVDKVVNGTPVVQAYKYG  899 (1163)
T ss_pred             cCCCEEEEEecCCcccccccc-----ccHHHHHHHhCCCCCEEEeCCCCccccccCCCEEEEeCChhH
Confidence            456788999999765332211     11234455543 799999999998765444666666555443

>TIGR00282 metallophosphoesterase, MG_246/BB_0505 family

Probab=97.66  E-value=0.003  Score=51.76  Aligned_cols=62  Identities=16%  Similarity=0.107  Sum_probs=42.3

Q ss_pred             CCeEEEEeccccccCCCCCChHHHHHHHHHHHHhCCccEEEeCCcccceEEe---eCCeEEEEeCCCCCCCCCCC
Q 024595          142 AKWKIVVGHHTIKSAGHHGVTKELLLRLLPILEENNVDMYVNGHDHCLQHIS---SNGIEFLTSGGGSKAWRGDR  213 (265)
Q Consensus       142 ~~~~iv~~H~P~~~~~~~~~~~~~~~~l~~~~~~~~v~~vl~GH~H~~~~~~---~~~~~~i~~g~~~~~~~~~~  213 (265)
                      ...+||.+|--        .+.  .+..+..+-+.+|++|+.-|+|..-...   ..|+.|++--+..+++.+.+
T Consensus       144 ~d~IIVd~Hae--------ats--EK~a~~~~ldg~vsaVvGtHtHV~TaD~~il~~gtayitD~Gm~G~~~svi  208 (266)
T TIGR00282       144 CDLIFVDFHAE--------TTS--EKNAFGMAFDGYVTAVVGTHTHVPTADLRILPKGTAYITDVGMTGPFGSVI  208 (266)
T ss_pred             CCEEEEEeCCC--------CHH--HHHHHHHHhCCCccEEEeCCCCCCCCcceeCCCCCEEEecCCcccCcccCc
Confidence            45788889982        222  2444555666799999999999876443   48999997666665554433

A member of this family from Mycoplasma Pneumoniae has been crystallized and described as a novel phosphatase.

>PRK09558 ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor; Reviewed

Probab=97.65  E-value=0.002  Score=58.90  Aligned_cols=55  Identities=25%  Similarity=0.273  Sum_probs=32.0

Q ss_pred             HHHHhhc-CCCCeEEEEeccccccCCCCCChHHHHHHHHHHHHhC---CccEEEeCCcccce
Q 024595          133 VDGALKN-SKAKWKIVVGHHTIKSAGHHGVTKELLLRLLPILEEN---NVDMYVNGHDHCLQ  190 (265)
Q Consensus       133 l~~~l~~-~~~~~~iv~~H~P~~~~~~~~~~~~~~~~l~~~~~~~---~v~~vl~GH~H~~~  190 (265)
                      +-++|++ .+...+|+++|..............   .-..+.++.   +|++++.||+|...
T Consensus       200 ~v~~Lk~~~~~D~IV~LsH~G~~~~~~~~~~~~---~d~~la~~~~~~~IDvIlgGHsH~~~  258 (551)
T PRK09558        200 VIPELKQTEKPDVIIALTHMGHYDDGEHGSNAP---GDVEMARSLPAGGLDMIVGGHSQDPV  258 (551)
T ss_pred             HHHHHHhccCCCEEEEEeccccccCCccCCCCc---cHHHHHHhCCccCceEEEeCCCCccc
Confidence            3344543 3567899999987643322111101   012344443   79999999999865

>COG5555 Cytolysin, a secreted calcineurin-like phosphatase [Cell motility and secretion]

Probab=97.65  E-value=0.00015  Score=58.55  Aligned_cols=213  Identities=17%  Similarity=0.088  Sum_probs=118.6

Q ss_pred             CCEEEecCCccCCCCCCCC--CChhhhhhcccccC----CCCCCCceEEcCCCcccCCCc-ccccccc-------ccc--
Q 024595           10 IDFVISTGDNFYEDGLTGE--EDPAFLDSFTSIYT----APSLQKQWYNVLGNHDYRGDV-EAQLSPV-------LTR--   73 (265)
Q Consensus        10 pd~vv~~GD~~~~~g~~~~--~~~~~~~~~~~~~~----~~~l~~p~~~i~GNHD~~~~~-~~~~~~~-------~~~--   73 (265)
                      |=-+|..||++.+.|-.+-  .+..-.++|+..+.    ...+..|+|+-.||||...+. .-.++.+       ...  
T Consensus       127 plGlV~ggDitddgggq~~qprEg~ql~qf~~RYsq~vG~~h~H~PvYvGlgnhdldq~gpph~~DWyRrElrdyve~~H  206 (392)
T COG5555         127 PLGLVEGGDITDDGGGQSFQPREGNQLKQFELRYSQDVGNIHMHYPVYVGLGNHDLDQKGPPHSLDWYRRELRDYVENYH  206 (392)
T ss_pred             ceeEEeecceeccCCCcccCccccchhhchHhhhccCCCCceeeeeeEeccCchhhcccCCCCchhHHHHHHHHHHHhhc
Confidence            4457788899943332111  01111122222222    112358999999999985431 1111110       000  


Q ss_pred             -cCCCceee----------eeeEecCceEEEEEEeCccccccccCCCCCCCCCccccchhhhhHHHHHHHHHHHhhc--C
Q 024595           74 -KDSRWLCS----------RSFILDAEIAEFVFVDTTPFVDEYFEDPGDSTYDWRGVYRRKEYLSDLLKDVDGALKN--S  140 (265)
Q Consensus        74 -~~~~~~~~----------~~y~~~~~~~~~i~lds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~~wl~~~l~~--~  140 (265)
                       .+..|..|          ..|+++.+.+..+-.....-..    ++   ..            ..-+-||+..|..  +
T Consensus       207 r~~vf~Kppvp~atYd~l~d~ySwdwgglhlvh~hrf~Gd~----~~---ga------------~sslpwlk~dl~~~aa  267 (392)
T COG5555         207 RSDVFWKPPVPPATYDQLKDRYSWDWGGLHLVHYHRFIGDA----EP---GA------------NSSLPWLKVDLIYSAA  267 (392)
T ss_pred             CcCcccCCCCCcccccccchheeccccceeEEEEeeecccc----CC---Cc------------cccCcceeccceeecc
Confidence             01122211          3477777777776655443100    00   00            1127899988876  4


Q ss_pred             CCCeEEEEeccccccCC--CC----------C------ChHHHHHHHHHHHHhCCccEEEeCCcccceEEee-CCeEEEE
Q 024595          141 KAKWKIVVGHHTIKSAG--HH----------G------VTKELLLRLLPILEENNVDMYVNGHDHCLQHISS-NGIEFLT  201 (265)
Q Consensus       141 ~~~~~iv~~H~P~~~~~--~~----------~------~~~~~~~~l~~~~~~~~v~~vl~GH~H~~~~~~~-~~~~~i~  201 (265)
                      +.++++++.|.-.....  ..          |      .....+..++..++.|+|...+.||-|......+ .++... 
T Consensus       268 dgrpv~LfqhyGwdtfsteawdpAsrT~Dd~Gsgaphww~a~er~all~~lqGYNvvg~fhGhkhd~~mayrr~~ld~f-  346 (392)
T COG5555         268 DGRPVYLFQHYGWDTFSTEAWDPASRTLDDTGSGAPHWWPAPERGALLFFLQGYNVVGTFHGHKHDFNMAYRRYDLDAF-  346 (392)
T ss_pred             CCCceeehhhhCccceeccccCchhcccccCCCCCCCCCCCCCcchHHHhhcCceeEEeccccccccceeeeecCcccc-
Confidence            78899999997543211  00          1      0123356788888899999999999998754332 333221 


Q ss_pred             eCCCCCCCCCCCCCCCCccceeeecCCCeEEEEEeCCeEEEEEEe---cCCCeEEEEEccCCC
Q 024595          202 SGGGSKAWRGDRNWWSPEELKLYYDGQGFMSVKMTRSEAVVLFYD---VHGNILHKWSIPKEP  261 (265)
Q Consensus       202 ~g~~~~~~~~~~~~~~~~~~~~~~~~~gy~~~~v~~~~i~~~~~~---~~g~~~~~~~i~~~~  261 (265)
                                      ..+.   .-..||.+..|.+.-|.+-...   ..|.++.+-.+.|++
T Consensus       347 ----------------kpka---a~~Ggfav~rvt~~~mDva~geae~~~G~v~Ft~afsk~w  390 (392)
T COG5555         347 ----------------KPKA---AVRGGFAVGRVTNPWMDVANGEAEHPRGSVCFTTAFSKKW  390 (392)
T ss_pred             ----------------Cccc---hhhcceeEEEecCchhhhhcccccCCCccEEEehhhhhcc
Confidence                            0000   1246889999998877776654   668888888877765

>cd07409 MPP_CD73_N CD73 ecto-5'-nucleotidase and related proteins, N-terminal metallophosphatase domain

Probab=97.62  E-value=0.0011  Score=55.10  Aligned_cols=41  Identities=27%  Similarity=0.383  Sum_probs=27.0

Q ss_pred             hhcCCCCeEEEEeccccccCCCCCChHHHHHHHHHHHHh-CCccEEEeCCcccce
Q 024595          137 LKNSKAKWKIVVGHHTIKSAGHHGVTKELLLRLLPILEE-NNVDMYVNGHDHCLQ  190 (265)
Q Consensus       137 l~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~l~~~~~~-~~v~~vl~GH~H~~~  190 (265)
                      |++.+...+|+++|....        .+     ..+.++ .+|+++++||+|...
T Consensus       178 lr~~~~D~II~l~H~G~~--------~d-----~~la~~~~giD~IiggH~H~~~  219 (281)
T cd07409         178 LKAQGVNKIIALSHSGYE--------VD-----KEIARKVPGVDVIVGGHSHTFL  219 (281)
T ss_pred             HHhcCCCEEEEEeccCch--------hH-----HHHHHcCCCCcEEEeCCcCccc
Confidence            333356778899998532        11     123333 479999999999975

CD73 is a mammalian ecto-5'-nucleotidase expressed in endothelial cells and lymphocytes that catalyzes the conversion of 5'-AMP to adenosine in the final step of a pathway that generates adenosine from ATP. This pathway also includes a CD39 nucleoside triphosphate dephosphorylase that mediates the dephosphorylation of ATP to ADP and then to 5'-AMP. These enzymes all have an N-terminal metallophosphatase domain and a C-terminal 5'nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active si

>cd07382 MPP_DR1281 Deinococcus radiodurans DR1281 and related proteins, metallophosphatase domain

Probab=97.49  E-value=0.0073  Score=49.36  Aligned_cols=61  Identities=23%  Similarity=0.229  Sum_probs=38.2

Q ss_pred             CCCeEEEEeccccccCCCCCChHHHHHHHHHHHHhCCccEEEeCCcccceEEe---eCCeEEEEeCCCCCCCCC
Q 024595          141 KAKWKIVVGHHTIKSAGHHGVTKELLLRLLPILEENNVDMYVNGHDHCLQHIS---SNGIEFLTSGGGSKAWRG  211 (265)
Q Consensus       141 ~~~~~iv~~H~P~~~~~~~~~~~~~~~~l~~~~~~~~v~~vl~GH~H~~~~~~---~~~~~~i~~g~~~~~~~~  211 (265)
                      +...+|+.+|.-.        ..+ ...+...+ ..+|++|+.||+|..-...   .+++.|++--+..+.+.+
T Consensus       140 ~~D~IIV~~H~g~--------tsE-k~ala~~l-dg~VdvIvGtHTHv~t~d~~il~~gTa~itd~Gm~G~~~s  203 (255)
T cd07382         140 EADIIFVDFHAEA--------TSE-KIALGWYL-DGRVSAVVGTHTHVQTADERILPGGTAYITDVGMTGPYDS  203 (255)
T ss_pred             CCCEEEEEECCCC--------CHH-HHHHHHhC-CCCceEEEeCCCCccCCccEEeeCCeEEEecCccccCCCc
Confidence            4567888899832        111 11222222 2369999999999985443   488889876665555443

DR1281 is an uncharacterized Deinococcus radiodurans protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.

>TIGR00024 SbcD_rel_arch putative phosphoesterase, SbcD/Mre11-related

Probab=97.37  E-value=8.5e-05  Score=59.57  Aligned_cols=50  Identities=24%  Similarity=0.135  Sum_probs=31.4

Q ss_pred             cccccCCCEEEecCCccCCCCCCCCCChhhhhhcccccCCCCCCCceEEcCCCcccC
Q 024595            4 IGEKLEIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQKQWYNVLGNHDYR   60 (265)
Q Consensus         4 ~~~~~~pd~vv~~GD~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~p~~~i~GNHD~~   60 (265)
                      ++++.+||.||++||+++..... ....++.+.++      .+..+++.|+||||..
T Consensus        53 li~~~~~d~vIi~GDl~h~~~~~-~~~~~~~~~l~------~~~~~v~~V~GNHD~~  102 (225)
T TIGR00024        53 IADKYGIEALIINGDLKHEFKKG-LEWRFIREFIE------VTFRDLILIRGNHDAL  102 (225)
T ss_pred             HHhhcCCCEEEEcCccccccCCh-HHHHHHHHHHH------hcCCcEEEECCCCCCc
Confidence            45667899999999999643311 11111222221      2456999999999953

Members of this uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11. SbcD is a subunit of the SbcCD nuclease of E. coli that can cleave DNA hairpins to unblock stalled DNA replication. All members of this family are archaeal.

>COG0737 UshA 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases [Nucleotide transport and metabolism]

Probab=97.33  E-value=0.0044  Score=56.26  Aligned_cols=61  Identities=16%  Similarity=0.190  Sum_probs=33.3

Q ss_pred             CCeEEEEeccccccCCCCCChHHHHHHHHHHHHhCCccEEEeCCcccceEEe-----eCCeEEEEeCCCC
Q 024595          142 AKWKIVVGHHTIKSAGHHGVTKELLLRLLPILEENNVDMYVNGHDHCLQHIS-----SNGIEFLTSGGGS  206 (265)
Q Consensus       142 ~~~~iv~~H~P~~~~~~~~~~~~~~~~l~~~~~~~~v~~vl~GH~H~~~~~~-----~~~~~~i~~g~~~  206 (265)
                      ...+|+++|.+...........+.   ...... ..+++++.||+|......     .+++..+..|..|
T Consensus       204 vD~iI~LsH~G~~~d~~~~~~~~~---~~~~~~-~~iD~i~~GH~H~~~~~~~~~~~~~~t~ivqag~~g  269 (517)
T COG0737         204 VDVIIALSHLGIEDDLELASEVPG---DVDVAV-PGIDLIIGGHSHTVFPGGDKPGTVNGTPIVQAGEYG  269 (517)
T ss_pred             CCEEEEEeccCcCccccccccccc---cccccc-cCcceEeccCCcccccCCcccCccCCEEEEccChhh
Confidence            567899999987654332111000   000000 349999999999653222     2556665544443

>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed

Probab=97.29  E-value=0.0037  Score=62.12  Aligned_cols=54  Identities=22%  Similarity=0.262  Sum_probs=34.1

Q ss_pred             HHhhcCCCCeEEEEeccccccCCCCCChHHHHHHHHHHHHh-CCccEEEeCCcccceE
Q 024595          135 GALKNSKAKWKIVVGHHTIKSAGHHGVTKELLLRLLPILEE-NNVDMYVNGHDHCLQH  191 (265)
Q Consensus       135 ~~l~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~l~~~~~~-~~v~~vl~GH~H~~~~  191 (265)
                      .+|++.....+|+++|...........   ..+....+.++ .+|++++.||+|....
T Consensus       228 ~~lk~~gaDvII~l~H~G~~~~~~~~~---~en~~~~la~~~~gID~Il~GHsH~~~~  282 (1163)
T PRK09419        228 PEMKKGGADVIVALAHSGIESEYQSSG---AEDSVYDLAEKTKGIDAIVAGHQHGLFP  282 (1163)
T ss_pred             HHHHhcCCCEEEEEeccCcCCCCCCCC---cchHHHHHHHhCCCCcEEEeCCCccccc
Confidence            345444677899999997654321111   12233445544 4799999999999764

>cd07380 MPP_CWF19_N Schizosaccharomyces pombe CWF19 and related proteins, N-terminal metallophosphatase domain

Probab=97.26  E-value=0.00094  Score=49.92  Aligned_cols=46  Identities=22%  Similarity=0.250  Sum_probs=28.7

Q ss_pred             cccCCCEEEecCCccCCCCCCCCCChhhhhhcccccCCCCCCCceEEcCCCcc
Q 024595            6 EKLEIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQKQWYNVLGNHD   58 (265)
Q Consensus         6 ~~~~pd~vv~~GD~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~p~~~i~GNHD   58 (265)
                      ++.+.|++|++||..-..   . .+.++.+-+.   ....+.+|+|++-|||+
T Consensus        23 k~gpFd~~ic~Gdff~~~---~-~~~~~~~y~~---g~~~~pipTyf~ggn~~   68 (150)
T cd07380          23 KKGPFDALLCVGDFFGDD---E-DDEELEAYKD---GSKKVPIPTYFLGGNNP   68 (150)
T ss_pred             ccCCeeEEEEecCccCCc---c-chhhHHHHhc---CCccCCCCEEEECCCCC
Confidence            346899999999987211   1 1122322211   12346799999999997

CWF19 cell cycle control protein (also known as CWF19-like 1 (CWF19L1) in Homo sapiens), N-terminal metallophosphatase domain. CWF19 contains C-terminal domains similar to that found in the CwfJ cell cycle control protein. The metallophosphatase domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site

>PRK09418 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed

Probab=97.26  E-value=0.009  Score=56.40  Aligned_cols=67  Identities=21%  Similarity=0.219  Sum_probs=41.0

Q ss_pred             HhhcCCCCeEEEEeccccccCCCCCChHHHHHHHHHHHHh-CCccEEEeCCcccceEEeeCCeEEEEeCCCC
Q 024595          136 ALKNSKAKWKIVVGHHTIKSAGHHGVTKELLLRLLPILEE-NNVDMYVNGHDHCLQHISSNGIEFLTSGGGS  206 (265)
Q Consensus       136 ~l~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~l~~~~~~-~~v~~vl~GH~H~~~~~~~~~~~~i~~g~~~  206 (265)
                      +|++.....+|+++|.-+.......   ........ +++ -+|+++++||+|.......+++..+..|..|
T Consensus       239 ~Lr~~GaDvIIaLsH~G~~~d~~~~---~~ena~~~-l~~v~gID~IlgGHsH~~~~~~ingv~vvqaG~~G  306 (780)
T PRK09418        239 KMKAEGADVIVALAHSGVDKSGYNV---GMENASYY-LTEVPGVDAVLMGHSHTEVKDVFNGVPVVMPGVFG  306 (780)
T ss_pred             HHHhcCCCEEEEEeccCcccccccc---cchhhhHH-HhcCCCCCEEEECCCCCcccccCCCEEEEEcChhh
Confidence            3544467789999999764332110   11111111 344 3799999999999876555777777665544

>PF14008 Metallophos_C: Iron/zinc purple acid phosphatase-like protein C; PDB: 3KBP_B 1KBP_B 4KBP_C 2QFP_B 2QFR_A 1XZW_B

Probab=97.18  E-value=0.0018  Score=40.65  Aligned_cols=59  Identities=12%  Similarity=0.120  Sum_probs=30.6

Q ss_pred             CeEEEEeCCCCCCCCCCCCCCCCccceeeecCCCeEEEEEe-CCeEEEEEEe-cCCCeEEEE
Q 024595          196 GIEFLTSGGGSKAWRGDRNWWSPEELKLYYDGQGFMSVKMT-RSEAVVLFYD-VHGNILHKW  255 (265)
Q Consensus       196 ~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~gy~~~~v~-~~~i~~~~~~-~~g~~~~~~  255 (265)
                      ++.+|++|++|........+ .++...+....+||.++++. ...|.++++. .+|+++|++
T Consensus         2 apVhiv~G~aG~~l~~~~~~-~~~wsa~r~~~~Gy~~l~v~N~T~l~~e~i~~~~g~v~D~f   62 (62)
T PF14008_consen    2 APVHIVVGAAGNGLDPFPYP-PPEWSAFRDSEYGYGRLTVANATHLHWEFIRSDDGSVLDEF   62 (62)
T ss_dssp             S-EEEEE--S-T----B-SS---TTEEEEE---EEEEEEE-SSSEEEEEEEETTS-T-CEE-
T ss_pred             CCEEEEECcCCCCcccccCC-CCCeeeeeccccCEEEEEEEcCCeEEEEEEECCCCcEecCC
Confidence            46789999998854332221 23334455678999999965 6799999998 559998874

>PRK11907 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed

Probab=97.08  E-value=0.011  Score=55.98  Aligned_cols=52  Identities=23%  Similarity=0.212  Sum_probs=30.7

Q ss_pred             HHhhcCCCCeEEEEeccccccCCC-CCChHHHHHHHHHHHHhCCccEEEeCCcccce
Q 024595          135 GALKNSKAKWKIVVGHHTIKSAGH-HGVTKELLLRLLPILEENNVDMYVNGHDHCLQ  190 (265)
Q Consensus       135 ~~l~~~~~~~~iv~~H~P~~~~~~-~~~~~~~~~~l~~~~~~~~v~~vl~GH~H~~~  190 (265)
                      .+|++.....+|+++|.-+..... .+.    .+.-..+.+-.+||+++.||+|...
T Consensus       303 ~~Lr~~GaDvIIaLsH~G~~~d~~~~~~----En~~~~LA~v~GIDaIvgGHsH~~~  355 (814)
T PRK11907        303 PTMRAAGADIVLVLSHSGIGDDQYEVGE----ENVGYQIASLSGVDAVVTGHSHAEF  355 (814)
T ss_pred             HHHHhcCCCEEEEEeCCCcccccccccc----cchhhHHhcCCCCCEEEECCCCCcc
Confidence            334444577889999986543211 111    1111223322489999999999964

>COG1311 HYS2 Archaeal DNA polymerase II, small subunit/DNA polymerase delta, subunit B [DNA replication, recombination, and repair]

Probab=96.99  E-value=0.025  Score=49.49  Aligned_cols=31  Identities=23%  Similarity=0.356  Sum_probs=25.4

Q ss_pred             CccEEEeCCcccceEEeeCCeEEEEeCCCCC
Q 024595          177 NVDMYVNGHDHCLQHISSNGIEFLTSGGGSK  207 (265)
Q Consensus       177 ~v~~vl~GH~H~~~~~~~~~~~~i~~g~~~~  207 (265)
                      -.+++.+||.|.+......++..+.+++...
T Consensus       418 vPDv~~~Ghvh~~g~~~y~gv~~vns~T~q~  448 (481)
T COG1311         418 VPDVFHTGHVHKFGTGVYEGVNLVNSGTWQE  448 (481)
T ss_pred             CCcEEEEccccccceeEEeccceEEeeeecc
Confidence            4699999999999988887888887766543

>COG4186 Predicted phosphoesterase or phosphohydrolase [General function prediction only]

Probab=96.97  E-value=0.0012  Score=48.61  Aligned_cols=39  Identities=21%  Similarity=0.248  Sum_probs=26.3

Q ss_pred             eEEEEeccccccCCCCCChHHHHHHHHHHHHhCCccEEEeCCccc
Q 024595          144 WKIVVGHHTIKSAGHHGVTKELLLRLLPILEENNVDMYVNGHDHC  188 (265)
Q Consensus       144 ~~iv~~H~P~~~~~~~~~~~~~~~~l~~~~~~~~v~~vl~GH~H~  188 (265)
                      ..|+++|.|-.+....+.    ..++.-  ...++.+.+.||.|.
T Consensus       109 ~~~~LsHyP~~~~~~~~~----~~r~~y--~~~~~~llIHGH~H~  147 (186)
T COG4186         109 EDVYLSHYPRPGQDHPGM----ESRFDY--LRLRVPLLIHGHLHS  147 (186)
T ss_pred             eEEEEEeCCCCCCCCcch----hhhHHH--HhccCCeEEeccccc
Confidence            468999999766555442    122222  234688999999999

>TIGR01530 nadN NAD pyrophosphatase/5'-nucleotidase NadN

Probab=96.96  E-value=0.0096  Score=54.40  Aligned_cols=43  Identities=30%  Similarity=0.472  Sum_probs=28.0

Q ss_pred             HHhhcCCCCeEEEEeccccccCCCCCChHHHHHHHHHHHHh-CCccEEEeCCcccce
Q 024595          135 GALKNSKAKWKIVVGHHTIKSAGHHGVTKELLLRLLPILEE-NNVDMYVNGHDHCLQ  190 (265)
Q Consensus       135 ~~l~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~l~~~~~~-~~v~~vl~GH~H~~~  190 (265)
                      +.|++.....+|+++|.-..        ..     ..+.++ .+|+++|+||+|...
T Consensus       176 ~~Lk~~g~D~II~lsH~g~~--------~d-----~~la~~~~~iD~IigGHsH~~~  219 (550)
T TIGR01530       176 NALKQQGINKIILLSHAGFE--------KN-----CEIAQKINDIDVIVSGDSHYLL  219 (550)
T ss_pred             HHHHhCCCCEEEEEecCCcH--------HH-----HHHHhcCCCCCEEEeCCCCccc
Confidence            34444456778899998421        11     123444 379999999999965

This model describes NadN of Haemophilus influenzae and a small number of close homologs in pathogenic, Gram-negative bacteria. NadN is a periplasmic enzyme that cleaves NAD (nicotinamide adenine dinucleotide) to NMN (nicotinamide mononucleotide) and AMP. The NMN must be converted by a 5'-nucleotidase to nicotinamide riboside for import. NadN belongs a large family of 5'-nucleotidases and has NMN 5'-nucleotidase activity for NMN, AMP, etc.

>COG1407 Predicted ICC-like phosphoesterases [General function prediction only]

Probab=96.95  E-value=0.00052  Score=54.64  Aligned_cols=55  Identities=22%  Similarity=0.170  Sum_probs=36.4

Q ss_pred             ccccccCCCEEEecCCccCCCCCCCCCChhhhhhcccccCCCCCCCceEEcCCCcccCC
Q 024595            3 LIGEKLEIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQKQWYNVLGNHDYRG   61 (265)
Q Consensus         3 ~~~~~~~pd~vv~~GD~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~p~~~i~GNHD~~~   61 (265)
                      +.++..+|+-+|++||+.++.+............|......    .-|++|.||||-+.
T Consensus        57 ~ii~~~~p~~lIilGD~KH~~~~~~~~e~~~~~~f~~~~~~----~evi~i~GNHD~~i  111 (235)
T COG1407          57 RIIERYGPKRLIILGDLKHEFGKSLRQEKEEVREFLELLDE----REVIIIRGNHDNGI  111 (235)
T ss_pred             HHHHhcCCCEEEEcCccccccCccccccHHHHHHHHHHhcc----CcEEEEeccCCCcc
Confidence            45778899999999999976654332323333344443321    14999999999643

>TIGR01390 CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphodiesterase

Probab=96.93  E-value=0.019  Score=53.25  Aligned_cols=51  Identities=18%  Similarity=0.191  Sum_probs=30.6

Q ss_pred             HhhcCCCCeEEEEeccccccCCCCCChHHHHHHHHHHHHh-CCccEEEeCCcccce
Q 024595          136 ALKNSKAKWKIVVGHHTIKSAGHHGVTKELLLRLLPILEE-NNVDMYVNGHDHCLQ  190 (265)
Q Consensus       136 ~l~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~l~~~~~~-~~v~~vl~GH~H~~~  190 (265)
                      +|++.....+|+++|..+.........   .+. ...+.+ .+|+++++||+|...
T Consensus       190 ~Lr~~gaDvII~LsH~G~~~d~~~~~~---en~-~~~l~~v~gID~Il~GHsH~~~  241 (626)
T TIGR01390       190 EMKAKGADIIVALAHSGISADPYQPGA---ENS-AYYLTKVPGIDAVLFGHSHAVF  241 (626)
T ss_pred             HHHHcCCCEEEEEeccCcCCCcccccc---chH-HHHHhcCCCCCEEEcCCCCccC
Confidence            344445778999999976533211010   111 112344 489999999999975

2',3'-cyclic-nucleotide 2'-phosphodiesterase is a bifunctional enzyme localized to the periplasm of Gram-negative bacteria. 2',3'-cyclic-nucleotide 2'-phosphodiesters are intermediates formed during the hydrolysis of RNA by the ribonuclease I, which is also found to the periplasm, and other enzymes of the RNAse T2 family. Bacteria are unable to transport 2',3'-cyclic-nucleotides into the cytoplasm. 2',3'-cyclic-nucleotide 2'-phosphodiesterase contains 2 active sites which catalyze the reactions that convert the 2',3'-cyclic-nucleotide into a 3'-nucleotide, which is then converted into nucleic acid and phosphate. Both final products can be transported into the cytoplasm. Thus, it has been suggested that 2',3'-cyclic-nucleotide 2'-phosphodiesterase has a 'scavenging' function. Experimental evidence indicates that 2',3'-cyclic-nucleotide 2'-phosphodiesterase enables Yersinia enterocolitica O:8 to grow on 2'3'-cAMP as a

>cd08162 MPP_PhoA_N Synechococcus sp

Probab=96.85  E-value=0.027  Score=47.63  Aligned_cols=45  Identities=20%  Similarity=0.198  Sum_probs=28.4

Q ss_pred             HHHhhcCCCCeEEEEeccccccCCCCCChHHHHHHHHHHHHh-CCccEEEeCCcccce
Q 024595          134 DGALKNSKAKWKIVVGHHTIKSAGHHGVTKELLLRLLPILEE-NNVDMYVNGHDHCLQ  190 (265)
Q Consensus       134 ~~~l~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~l~~~~~~-~~v~~vl~GH~H~~~  190 (265)
                      -+.|++.....+|+++|.--+       ..+     ..+.++ .+|+++|.||+|...
T Consensus       200 v~~Lr~~gvD~II~LsH~g~~-------~~d-----~~lA~~v~gIDvIigGHsH~~l  245 (313)
T cd08162         200 IDALTAQGINKIILLSHLQQI-------SIE-----QALAALLSGVDVIIAGGSNTLL  245 (313)
T ss_pred             HHHHHHCCCCEEEEEeccccc-------chH-----HHHHhcCCCCCEEEeCCCCccC
Confidence            334444456778899998311       111     234444 379999999999875

strain PCC 7942 PhoA and related proteins, N-terminal metallophosphatase domain. Synechococcus sp. strain PCC 7942 PhoA is a large atypical alkaline phosphatase. It is known to be transported across the inner cytoplasmic membrane and into the periplasmic space. In vivo inactivation of the gene encoding PhoA leads to a loss of extracellular, phosphate-regulated phosphatase activity, but does not appear to affect the cells capacity for phosphate uptake. PhoA may play a role in scavenging phosphate during growth of Synechococcus sp. strain PCC 7942 in its natural environment. PhoA belongs to a domain family which includes the bacterial enzyme UshA and several other related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly relat

>cd07390 MPP_AQ1575 Aquifex aeolicus AQ1575 and related proteins, metallophosphatase domain

Probab=96.84  E-value=0.0013  Score=50.40  Aligned_cols=42  Identities=26%  Similarity=0.232  Sum_probs=27.5

Q ss_pred             CCCEEEecCCccCCCCCCCCCChhhhhhcccccCCCCCCCceEEcCCCcccCC
Q 024595            9 EIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQKQWYNVLGNHDYRG   61 (265)
Q Consensus         9 ~pd~vv~~GD~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~p~~~i~GNHD~~~   61 (265)
                      ++|.|+++||++. .+..    ....+.+      ..++.|+++|+||||...
T Consensus        42 ~~d~vi~~GDl~~-~~~~----~~~~~~l------~~~~~~~~~v~GNHD~~~   83 (168)
T cd07390          42 PDDTVYHLGDFSF-GGKA----GTELELL------SRLNGRKHLIKGNHDSSL   83 (168)
T ss_pred             CCCEEEEeCCCCC-CCCh----HHHHHHH------HhCCCCeEEEeCCCCchh
Confidence            6899999999994 2211    1111111      134579999999999643

This family includes bacterial and archeal proteins homologous to AQ1575, an uncharacterized Aquifex aeolicus protein. AQ1575 may play an accessory role in DNA repair, based on the close proximity of its gene to Holliday junction resolvasome genes. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a d

>PHA02239 putative protein phosphatase

Probab=96.67  E-value=0.00069  Score=54.71  Aligned_cols=43  Identities=21%  Similarity=0.313  Sum_probs=26.3

Q ss_pred             CCEEEecCCccCCCCCCCCCChhhhhhcccccCCCCCCCceEEcCCCccc
Q 024595           10 IDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQKQWYNVLGNHDY   59 (265)
Q Consensus        10 pd~vv~~GD~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~p~~~i~GNHD~   59 (265)
                      .|.++++||++ +.|..+   .+....+..+   .....++++++||||.
T Consensus        30 ~d~li~lGD~i-DrG~~s---~~v~~~l~~~---~~~~~~~~~l~GNHE~   72 (235)
T PHA02239         30 EETIVFLGDYV-DRGKRS---KDVVNYIFDL---MSNDDNVVTLLGNHDD   72 (235)
T ss_pred             CCEEEEecCcC-CCCCCh---HHHHHHHHHH---hhcCCCeEEEECCcHH
Confidence            59999999999 455221   2222222111   1123579999999996

>PRK00166 apaH diadenosine tetraphosphatase; Reviewed

Probab=96.39  E-value=0.0019  Score=53.39  Aligned_cols=43  Identities=30%  Similarity=0.314  Sum_probs=27.9

Q ss_pred             cCCCEEEecCCccCCCCCCCCCChhhhhhcccccCCCCCCCceEEcCCCcccC
Q 024595            8 LEIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQKQWYNVLGNHDYR   60 (265)
Q Consensus         8 ~~pd~vv~~GD~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~p~~~i~GNHD~~   60 (265)
                      .++|.++++||++ +.|..   ..+..+.   +.   .++.++++|.||||..
T Consensus        27 ~~~D~li~lGDlV-drGp~---s~~vl~~---l~---~l~~~~~~VlGNHD~~   69 (275)
T PRK00166         27 PAKDTLWLVGDLV-NRGPD---SLEVLRF---VK---SLGDSAVTVLGNHDLH   69 (275)
T ss_pred             CCCCEEEEeCCcc-CCCcC---HHHHHHH---HH---hcCCCeEEEecChhHH
Confidence            3689999999999 45521   1222222   21   2355788999999973

>KOG4419 consensus 5' nucleotidase [Nucleotide transport and metabolism]

Probab=96.39  E-value=0.029  Score=50.26  Aligned_cols=60  Identities=15%  Similarity=0.198  Sum_probs=39.9

Q ss_pred             HHHHHHHHHhhcCCCCeEEEEeccccccCCCCCChHHHHHHHHHHHHhC-CccE-EEeCCcccceEEe
Q 024595          128 DLLKDVDGALKNSKAKWKIVVGHHTIKSAGHHGVTKELLLRLLPILEEN-NVDM-YVNGHDHCLQHIS  193 (265)
Q Consensus       128 ~Q~~wl~~~l~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~l~~~~~~~-~v~~-vl~GH~H~~~~~~  193 (265)
                      .|.+|-...++..+-..++++.|.|+....      +..-.+..+.+.+ ++.+ |+.||+|......
T Consensus       212 ~~~~~~~~m~~~~~idlii~lgH~~~~~~~------e~~~~~~~ir~~~p~t~IqviGGHshird~a~  273 (602)
T KOG4419|consen  212 TQSEWEQDMVNTTDIDLIIALGHSPVRDDD------EWKSLHAEIRKVHPNTPIQVIGGHSHIRDFAV  273 (602)
T ss_pred             hccchHHHHhhccCccEEEEecccccccch------hhhhHHHHHhhhCCCCceEEECchhhhhhhhh
Confidence            567777777777777778888999875321      1112344455554 5677 9999999876543

>cd07422 MPP_ApaH Escherichia coli ApaH and related proteins, metallophosphatase domain

Probab=96.23  E-value=0.0029  Score=51.78  Aligned_cols=43  Identities=30%  Similarity=0.281  Sum_probs=27.5

Q ss_pred             cCCCEEEecCCccCCCCCCCCCChhhhhhcccccCCCCCCCceEEcCCCcccC
Q 024595            8 LEIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQKQWYNVLGNHDYR   60 (265)
Q Consensus         8 ~~pd~vv~~GD~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~p~~~i~GNHD~~   60 (265)
                      .+.|.++++||++ +.|..   ..+..   ..+.   .++..++.|+||||..
T Consensus        25 ~~~D~Li~lGDlV-dRGp~---s~evl---~~l~---~l~~~v~~VlGNHD~~   67 (257)
T cd07422          25 PAKDRLWLVGDLV-NRGPD---SLETL---RFVK---SLGDSAKTVLGNHDLH   67 (257)
T ss_pred             CCCCEEEEecCcC-CCCcC---HHHHH---HHHH---hcCCCeEEEcCCchHH
Confidence            3579999999999 45522   12222   2221   2335788999999974

ApaH (also known as symmetrically cleaving Ap4A hydrolase and bis(5'nucleosyl)-tetraphosphatase) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases that hydrolyzes the nucleotide-signaling molecule diadenosine tetraphosphate (Ap(4)A) into two ADP and also hydrolyzes Ap(5)A, Gp(4)G, and other extending compounds. Null mutations in apaH result in high intracellular levels of Ap(4)A which correlate with multiple phenotypes, including a decreased expression of catabolite-repressible genes, a reduction in the expression of flagellar operons, and an increased sensitivity to UV and heat. Ap4A hydrolase is important in responding to heat shock and oxidative stress via regulating the concentration of Ap4A in bacteria. Ap4A hydrolase is also thought to play a role in siderophore production, but the mechanism by which ApaH interacts with siderophore pathwa

>cd07425 MPP_Shelphs Shewanella-like phosphatases, metallophosphatase domain

Probab=95.92  E-value=0.0041  Score=49.34  Aligned_cols=25  Identities=28%  Similarity=0.219  Sum_probs=20.5

Q ss_pred             HHHHHHHhCCccEEEeCCcccceEE
Q 024595          168 RLLPILEENNVDMYVNGHDHCLQHI  192 (265)
Q Consensus       168 ~l~~~~~~~~v~~vl~GH~H~~~~~  192 (265)
                      .+..+++..+.+++++||+|.....
T Consensus       158 ~~~~~l~~~~~~~iv~GHTh~~~~~  182 (208)
T cd07425         158 HLDKVLERLGAKRMVVGHTPQEGGI  182 (208)
T ss_pred             HHHHHHHHcCCCeEEEcCeeeecCc
Confidence            4667788888999999999987644

This family includes bacterial, eukaryotic, and archeal proteins orthologous to the Shewanella cold-active protein-tyrosine phosphatase, CAPTPase. CAPTPase is an uncharacterized protein that belongs to the Shelph (Shewanella-like phosphatase) family of PPP (phosphoprotein phosphatases). The PPP family is one of two known protein phosphatase families specific for serine and threonine. In addition to Shelps, the PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metal

>PRK09420 cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein; Reviewed

Probab=95.79  E-value=0.18  Score=47.03  Aligned_cols=51  Identities=20%  Similarity=0.222  Sum_probs=30.6

Q ss_pred             HHhhcCCCCeEEEEeccccccCCC-CCChHHHHHHHHHHHHh-CCccEEEeCCcccce
Q 024595          135 GALKNSKAKWKIVVGHHTIKSAGH-HGVTKELLLRLLPILEE-NNVDMYVNGHDHCLQ  190 (265)
Q Consensus       135 ~~l~~~~~~~~iv~~H~P~~~~~~-~~~~~~~~~~l~~~~~~-~~v~~vl~GH~H~~~  190 (265)
                      .+|++.....+|+++|..+..... ...    .+.... +.+ .+|++++.||+|...
T Consensus       212 ~~Lk~~gaDvII~LsH~G~~~d~~~~~a----en~~~~-l~~v~gID~Il~GHsH~~~  264 (649)
T PRK09420        212 PEMKEKGADIVVAIPHSGISADPYKAMA----ENSVYY-LSEVPGIDAIMFGHSHAVF  264 (649)
T ss_pred             HHHHHcCCCEEEEEecCCcCCCCccccc----cchhHH-HhcCCCCCEEEeCCCCccC
Confidence            335544677899999997643211 111    111112 333 479999999999865

>cd00144 MPP_PPP_family phosphoprotein phosphatases of the metallophosphatase superfamily, metallophosphatase domain

Probab=95.76  E-value=0.0059  Score=48.91  Aligned_cols=46  Identities=22%  Similarity=0.193  Sum_probs=28.0

Q ss_pred             cCCCEEEecCCccCCCCCCCCCChhhhhhcccccCCCCCCCceEEcCCCcccC
Q 024595            8 LEIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQKQWYNVLGNHDYR   60 (265)
Q Consensus         8 ~~pd~vv~~GD~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~p~~~i~GNHD~~   60 (265)
                      .++|.+|++||++. .|..+   .+.......+.   ....+++++.||||..
T Consensus        23 ~~~d~li~lGD~vd-rg~~~---~~~l~~l~~~~---~~~~~~~~l~GNHe~~   68 (225)
T cd00144          23 PPNDKLIFLGDYVD-RGPDS---VEVIDLLLALK---ILPDNVILLRGNHEDM   68 (225)
T ss_pred             CCCCEEEEECCEeC-CCCCc---HHHHHHHHHhc---CCCCcEEEEccCchhh
Confidence            47899999999993 44211   22222111111   1145899999999974

The PPP (phosphoprotein phosphatase) family is one of two known protein phosphatase families specific for serine and threonine. This family includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate

>cd07387 MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2), C-terminal domain

Probab=95.73  E-value=0.17  Score=41.43  Aligned_cols=55  Identities=9%  Similarity=0.049  Sum_probs=31.2

Q ss_pred             CCceEEcCCCcccCCCcc--cccc-ccccccC--CCc-eeeeeeEecCceEEEEEEeCccc
Q 024595           47 QKQWYNVLGNHDYRGDVE--AQLS-PVLTRKD--SRW-LCSRSFILDAEIAEFVFVDTTPF  101 (265)
Q Consensus        47 ~~p~~~i~GNHD~~~~~~--~~~~-~~~~~~~--~~~-~~~~~y~~~~~~~~~i~lds~~~  101 (265)
                      .+|+.++|||||-.+...  ..+. .+++...  ..+ ...+.|.+..++++|++...+..
T Consensus        94 ~i~V~imPG~~Dp~~~~lPQqplh~~lfp~s~~~~~~~~vtNP~~~~i~g~~vLgtsGqni  154 (257)
T cd07387          94 SVPVDLMPGEFDPANHSLPQQPLHRCLFPKSSNYSTLNLVTNPYEFSIDGVRVLGTSGQNV  154 (257)
T ss_pred             CCeEEECCCCCCcccccCCCCCCCHHHhhcccccCCcEEeCCCeEEEECCEEEEEECCCCH
Confidence            689999999999754311  0010 0111110  111 12355677778899988877654

PolD2 (DNA polymerase delta, subunit 2) is an auxiliary subunit of the eukaryotic DNA polymerase delta (PolD) complex thought to play a regulatory role and to serve as a scaffold for PolD assembly by interacting simultaneously with all of the other three subunits. PolD2 is catalytically inactive and lacks the active site residues required for phosphoesterase activity in other members of this superfamily. PolD2 is also involved in the recruitment of several proteins regulating DNA metabolism, including p21, PDIP1, PDIP38, PDIP46, and WRN. Human PolD consists of four subunits: p125 (PolD1), p50 (PolD2), p66(PolD3), and p12(PolD4). PolD is one of three major replicases in eukaryotes. PolD also plays an essential role in translesion DNA synthesis, homologous recombination, and DNA repair. Within the PolD complex, PolD2 tightly associates with PolD3. PolD2 belongs to the metallophosphatase (MPP) superfamily

>cd07413 MPP_PA3087 Pseudomonas aeruginosa PA3087 and related proteins, metallophosphatase domain

Probab=95.53  E-value=0.0095  Score=47.79  Aligned_cols=43  Identities=23%  Similarity=0.316  Sum_probs=26.2

Q ss_pred             CCCEEEecCCccCCCCCCCCCChhhhhhcccccCCCCCCCceEEcCCCccc
Q 024595            9 EIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQKQWYNVLGNHDY   59 (265)
Q Consensus         9 ~pd~vv~~GD~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~p~~~i~GNHD~   59 (265)
                      ..|.+|++||+| +.|..   ..+..+.+..+.    ..-+++.+.||||.
T Consensus        33 ~~d~lvflGD~I-DRGp~---S~~vl~~l~~l~----~~~~~~~l~GNHE~   75 (222)
T cd07413          33 PERQVVFLGDLI-DRGPE---IRELLEIVKSMV----DAGHALAVMGNHEF   75 (222)
T ss_pred             CCCEEEEeCccc-CCCCC---HHHHHHHHHHhh----cCCCEEEEEccCcH
Confidence            468999999999 45522   222222222211    12368899999995

PA3087 is an uncharacterized protein from Pseudomonas aeruginosa with a metallophosphatase domain that belongs to the phosphoprotein phosphatase (PPP) family. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of

>PF13277 YmdB: YmdB-like protein; PDB: 2CV9_B 2Z06_C

Probab=95.30  E-value=0.27  Score=39.80  Aligned_cols=169  Identities=17%  Similarity=0.197  Sum_probs=68.0

Q ss_pred             ccccccCCCEEEecCCccCCCCCCCCCChhhhhhcccccCCCCCCCceEEcCCCcccCCC-cccccc---cccc-ccCCC
Q 024595            3 LIGEKLEIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQKQWYNVLGNHDYRGD-VEAQLS---PVLT-RKDSR   77 (265)
Q Consensus         3 ~~~~~~~pd~vv~~GD~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~p~~~i~GNHD~~~~-~~~~~~---~~~~-~~~~~   77 (265)
                      ++-++.++||||..|.+. ..|.. .. +..   ++.++   .+++-+ .+.|||=|... ....++   ..++ .+.+.
T Consensus        21 ~L~~~~~~DfVIaNgENa-a~G~G-it-~~~---~~~L~---~~GvDv-iT~GNH~wdkkei~~~i~~~~~ilRPaN~p~   90 (253)
T PF13277_consen   21 ELKEEYGIDFVIANGENA-AGGFG-IT-PKI---AEELF---KAGVDV-ITMGNHIWDKKEIFDFIDKEPRILRPANYPP   90 (253)
T ss_dssp             HHGG--G-SEEEEE-TTT-TTTSS----HHH---HHHHH---HHT-SE-EE--TTTTSSTTHHHHHHH-SSEE--TTS-T
T ss_pred             HHHhhcCCCEEEECCccc-CCCCC-CC-HHH---HHHHH---hcCCCE-EecCcccccCcHHHHHHhcCCCcEECCCCCC
Confidence            455678999999999988 34321 11 111   22222   123333 56799998653 111110   0010 01000


Q ss_pred             ceee---eeeEecCceEEEEEEeCccccccccCCCCCCCCCccccchhhhhHHHHHHHHHHHhhcCCCCeEEEEeccccc
Q 024595           78 WLCS---RSFILDAEIAEFVFVDTTPFVDEYFEDPGDSTYDWRGVYRRKEYLSDLLKDVDGALKNSKAKWKIVVGHHTIK  154 (265)
Q Consensus        78 ~~~~---~~y~~~~~~~~~i~lds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~~wl~~~l~~~~~~~~iv~~H~P~~  154 (265)
                      -..+   ..|..+...+.++.|=.+.++..         .+    +|.     .-++++-+.+ +.+...+||=+|.   
T Consensus        91 ~~pG~G~~i~~~~g~kv~ViNl~Gr~fm~~---------~~----~PF-----~~~d~~l~~l-~~~~~~iiVDFHA---  148 (253)
T PF13277_consen   91 GTPGRGYRIFEKNGKKVAVINLMGRVFMPP---------ID----CPF-----RAADRLLEEL-KEETDIIIVDFHA---  148 (253)
T ss_dssp             T-SSBSEEEEEETTEEEEEEEEE--TTS------------S-----HH-----HHHHHHHHH------SEEEEEEE----
T ss_pred             CCCcCcEEEEEECCEEEEEEECcccccCCC---------CC----ChH-----HHHHHHHHhc-cccCCEEEEEeec---
Confidence            0000   12333334455555555544321         11    111     1133344444 2345566666887   


Q ss_pred             cCCCCCChHHHHHHHHHHHHhCCccEEEeCCcccceEE---eeCCeEEEEeCCCCCCCC
Q 024595          155 SAGHHGVTKELLLRLLPILEENNVDMYVNGHDHCLQHI---SSNGIEFLTSGGGSKAWR  210 (265)
Q Consensus       155 ~~~~~~~~~~~~~~l~~~~~~~~v~~vl~GH~H~~~~~---~~~~~~~i~~g~~~~~~~  210 (265)
                            ..-. ++.-+...-+.+|.+|+.=|+|..-..   ...|+.|++--+..++..
T Consensus       149 ------EaTS-EK~A~g~~lDGrvsaV~GTHTHVqTaDerILp~GTaYiTDvGMtG~~d  200 (253)
T PF13277_consen  149 ------EATS-EKQAMGWYLDGRVSAVVGTHTHVQTADERILPGGTAYITDVGMTGPYD  200 (253)
T ss_dssp             ------S-HH-HHHHHHHHHBTTBSEEEEESSSS-BS--EE-TTS-EEES---EBEESS
T ss_pred             ------CcHH-HHHHHHHHhCCcEEEEEeCCCCccCchhhccCCCCEEEecCccccCcc
Confidence                  1112 222333444578999999999987544   347999996554444443

>PRK11439 pphA serine/threonine protein phosphatase 1; Provisional

Probab=94.82  E-value=0.015  Score=46.46  Aligned_cols=29  Identities=14%  Similarity=0.368  Sum_probs=22.0

Q ss_pred             CccEEEeCCcccceEEeeCCeEEEEeCCC
Q 024595          177 NVDMYVNGHDHCLQHISSNGIEFLTSGGG  205 (265)
Q Consensus       177 ~v~~vl~GH~H~~~~~~~~~~~~i~~g~~  205 (265)
                      +.+.|++||+|.......++...|-+|+.
T Consensus       179 ~~~~vv~GHT~~~~~~~~~~~i~IDtGav  207 (218)
T PRK11439        179 GADHFWFGHTPLRHRVDIGNLHYIDTGAV  207 (218)
T ss_pred             CCCEEEECCccCCCccccCCEEEEECCCC
Confidence            45689999999987665577777777764

>PRK09968 serine/threonine-specific protein phosphatase 2; Provisional

Probab=94.72  E-value=0.018  Score=46.07  Aligned_cols=29  Identities=14%  Similarity=0.222  Sum_probs=22.9

Q ss_pred             CccEEEeCCcccceEEeeCCeEEEEeCCC
Q 024595          177 NVDMYVNGHDHCLQHISSNGIEFLTSGGG  205 (265)
Q Consensus       177 ~v~~vl~GH~H~~~~~~~~~~~~i~~g~~  205 (265)
                      +.++|++||+|.......++..++.+|+.
T Consensus       179 ~~~~vv~GHTh~~~~~~~~~~i~IDtGs~  207 (218)
T PRK09968        179 GADYFIFGHMMFDNIQTFANQIYIDTGSP  207 (218)
T ss_pred             CCCEEEECCCCcCcceeECCEEEEECCCC
Confidence            56899999999987766677777777754

>cd07421 MPP_Rhilphs Rhilph phosphatases, metallophosphatase domain

Probab=94.55  E-value=0.023  Score=47.07  Aligned_cols=46  Identities=24%  Similarity=0.353  Sum_probs=25.3

Q ss_pred             CCCEEEecCCccCCCCCCCCCChhhhhhcccccCCCCCCCceEEcCCCccc
Q 024595            9 EIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQKQWYNVLGNHDY   59 (265)
Q Consensus         9 ~pd~vv~~GD~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~p~~~i~GNHD~   59 (265)
                      ..+.+|++||++ +.|..   ..+..+.+..... ......++++.||||.
T Consensus        34 ~~~~iVfLGDyV-DRGPd---S~eVld~L~~l~~-~~~~~~vv~LrGNHE~   79 (304)
T cd07421          34 ASALVIFLGDYC-DRGPE---TRKVIDFLISLPE-KHPKQRHVFLCGNHDF   79 (304)
T ss_pred             CCcEEEEeCCcC-CCCCC---HHHHHHHHHHhhh-cccccceEEEecCChH
Confidence            467899999999 45521   1222222221100 0011257899999994

Rhilphs (Rhizobiales/ Rhodobacterales/ Rhodospirillaceae-like phosphatases) are a phylogenetically distinct group of PPP (phosphoprotein phosphatases), found only in land plants. They are named for their close relationship to to PPP phosphatases from alpha-Proteobacteria, including Rhizobiales, Rhodobacterales and Rhodospirillaceae. The PPP (phosphoprotein phosphatase) family, to which the Rhilphs belong, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central rol

>PRK13625 bis(5'-nucleosyl)-tetraphosphatase PrpE; Provisional

Probab=94.54  E-value=0.019  Score=46.79  Aligned_cols=42  Identities=21%  Similarity=0.192  Sum_probs=25.6

Q ss_pred             CCEEEecCCccCCCCCCCCCChhhhhhcccccCCCCCCCceEEcCCCccc
Q 024595           10 IDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQKQWYNVLGNHDY   59 (265)
Q Consensus        10 pd~vv~~GD~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~p~~~i~GNHD~   59 (265)
                      -|.+|++||++ +.|..+   .+..+....+    ....+++++.||||.
T Consensus        37 ~d~li~lGDli-DRGp~S---~~vl~~~~~~----~~~~~~~~l~GNHE~   78 (245)
T PRK13625         37 QRKLAFVGDLT-DRGPHS---LRMIEIVWEL----VEKKAAYYVPGNHCN   78 (245)
T ss_pred             CCEEEEECccc-CCCcCh---HHHHHHHHHH----hhCCCEEEEeCccHH
Confidence            47999999999 455222   2222221111    123478999999994

>TIGR00668 apaH bis(5'-nucleosyl)-tetraphosphatase (symmetrical)

Probab=94.46  E-value=0.021  Score=47.11  Aligned_cols=42  Identities=33%  Similarity=0.288  Sum_probs=25.7

Q ss_pred             cCCCEEEecCCccCCCCCCCCCChhhhhhcccccCCCCCCCceEEcCCCccc
Q 024595            8 LEIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQKQWYNVLGNHDY   59 (265)
Q Consensus         8 ~~pd~vv~~GD~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~p~~~i~GNHD~   59 (265)
                      ...|-++++||++ ..|..   ..+..+.+.      +++..++.|.||||.
T Consensus        27 ~~~D~l~~lGDlV-dRGP~---slevL~~l~------~l~~~~~~VlGNHD~   68 (279)
T TIGR00668        27 PGQDTLWLTGDLV-ARGPG---SLEVLRYVK------SLGDAVRLVLGNHDL   68 (279)
T ss_pred             CCCCEEEEeCCcc-CCCCC---HHHHHHHHH------hcCCCeEEEEChhHH
Confidence            3569999999999 44522   122222222      233346689999996

Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase.

>cd07423 MPP_PrpE Bacillus subtilis PrpE and related proteins, metallophosphatase domain

Probab=94.38  E-value=0.023  Score=45.94  Aligned_cols=29  Identities=17%  Similarity=0.075  Sum_probs=22.0

Q ss_pred             CccEEEeCCcccceEEeeCCeEEEEeCCC
Q 024595          177 NVDMYVNGHDHCLQHISSNGIEFLTSGGG  205 (265)
Q Consensus       177 ~v~~vl~GH~H~~~~~~~~~~~~i~~g~~  205 (265)
                      +.+++++||+|.......++...|-+|+.
T Consensus       181 ~~~~vv~GHt~~~~~~~~~~~i~IDtGav  209 (234)
T cd07423         181 GDALVVYGHTPVPEPRWLNNTINIDTGCV  209 (234)
T ss_pred             CCeEEEECCCCCccceEeCCEEEEECCCC
Confidence            45789999999987655567777777764

PrpE (protein phosphatase E) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases and a key signal transduction pathway component controlling the expression of spore germination receptors GerA and GerK in Bacillus subtilis. PrpE is closely related to ApaH (also known symmetrical Ap(4)A hydrolase and bis(5'nucleosyl)-tetraphosphatase). PrpE has specificity for phosphotyrosine only, unlike the serine/threonine phosphatases to which it is related. The Bacilli members of this family are single domain proteins while the other members have N- and C-terminal domains in addition to this phosphatase domain. The PPP (phosphoprotein phosphatase) family, to which PrpE belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpA/Prp

>PF09587 PGA_cap: Bacterial capsule synthesis protein PGA_cap; InterPro: IPR019079 CapA is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria

Probab=93.73  E-value=1.7  Score=35.45  Aligned_cols=62  Identities=19%  Similarity=0.259  Sum_probs=38.6

Q ss_pred             HHHHHHHhhc--CCCCeEEEEeccccccCCCCCChHHHHHHHHHHHHhCCccEEEeCCcccceEEee
Q 024595          130 LKDVDGALKN--SKAKWKIVVGHHTIKSAGHHGVTKELLLRLLPILEENNVDMYVNGHDHCLQHISS  194 (265)
Q Consensus       130 ~~wl~~~l~~--~~~~~~iv~~H~P~~~~~~~~~~~~~~~~l~~~~~~~~v~~vl~GH~H~~~~~~~  194 (265)
                      .+.+.+.+++  .....+||++|--..   ......+....+...+.+.++++|+.+|.|..+-...
T Consensus       170 ~~~i~~~i~~~r~~~D~vIv~~HwG~e---~~~~p~~~q~~~a~~lidaGaDiIiG~HpHv~q~~E~  233 (250)
T PF09587_consen  170 IERIKEDIREARKKADVVIVSLHWGIE---YENYPTPEQRELARALIDAGADIIIGHHPHVIQPVEI  233 (250)
T ss_pred             HHHHHHHHHHHhcCCCEEEEEeccCCC---CCCCCCHHHHHHHHHHHHcCCCEEEeCCCCcccceEE
Confidence            3445555444  245688888997321   1111122334555566668999999999999987655

Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein [].

>COG1692 Calcineurin-like phosphoesterase [General function prediction only]

Probab=93.27  E-value=3.7  Score=33.15  Aligned_cols=74  Identities=18%  Similarity=0.137  Sum_probs=42.7

Q ss_pred             HHHHHHHhhcC--CCCeEEEEeccccccCCCCCChHHHHHHHHHHHHhCCccEEEeCCcccceEEee---CCeEEEEeCC
Q 024595          130 LKDVDGALKNS--KAKWKIVVGHHTIKSAGHHGVTKELLLRLLPILEENNVDMYVNGHDHCLQHISS---NGIEFLTSGG  204 (265)
Q Consensus       130 ~~wl~~~l~~~--~~~~~iv~~H~P~~~~~~~~~~~~~~~~l~~~~~~~~v~~vl~GH~H~~~~~~~---~~~~~i~~g~  204 (265)
                      +.-+++.+...  +.+.+||-+|.--.         ..... +...-+.++.+|+.=|+|..-...+   .|+.|++--+
T Consensus       129 F~~~d~l~~~~~~~~~~iiVDFHAEtT---------SEK~a-~g~yldGrvsavvGTHTHV~TaD~rIL~~GTayiTDvG  198 (266)
T COG1692         129 FKAADKLLDEIKLGTDLIIVDFHAETT---------SEKNA-FGWYLDGRVSAVVGTHTHVPTADERILPKGTAYITDVG  198 (266)
T ss_pred             HHHHHHHHHhCccCCceEEEEccccch---------hhhhh-hheEEcCeEEEEEeccCccccccceecCCCcEEEecCc
Confidence            44455555553  33466777887211         11111 1222245789999999998765443   7899997666


Q ss_pred             CCCCCCCCC
Q 024595          205 GSKAWRGDR  213 (265)
Q Consensus       205 ~~~~~~~~~  213 (265)
                      ..+++.+.+
T Consensus       199 MtG~~dSvi  207 (266)
T COG1692         199 MTGPYDSVI  207 (266)
T ss_pred             ccccccccc
Confidence            655554443

>smart00854 PGA_cap Bacterial capsule synthesis protein PGA_cap

Probab=92.41  E-value=1.1  Score=36.21  Aligned_cols=51  Identities=27%  Similarity=0.233  Sum_probs=32.2

Q ss_pred             CCCeEEEEeccccccCCCCCChHHHHHHHHHHHHhCCccEEEeCCcccceEEee
Q 024595          141 KAKWKIVVGHHTIKSAGHHGVTKELLLRLLPILEENNVDMYVNGHDHCLQHISS  194 (265)
Q Consensus       141 ~~~~~iv~~H~P~~~~~~~~~~~~~~~~l~~~~~~~~v~~vl~GH~H~~~~~~~  194 (265)
                      +...+|+++|--......  .. .....+..-+.+.++++|+.||.|..+....
T Consensus       172 ~~D~vIv~~H~G~e~~~~--p~-~~~~~~A~~l~~~G~DvIiG~H~H~~~~~e~  222 (239)
T smart00854      172 KADVVIVSLHWGVEYQYE--PT-DEQRELAHALIDAGADVVIGHHPHVLQPIEI  222 (239)
T ss_pred             cCCEEEEEecCccccCCC--CC-HHHHHHHHHHHHcCCCEEEcCCCCcCCceEE
Confidence            467889999985432211  11 1223344445457899999999999875544

This protein is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria. Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein.

>cd07381 MPP_CapA CapA and related proteins, metallophosphatase domain

Probab=92.37  E-value=1.2  Score=35.98  Aligned_cols=50  Identities=24%  Similarity=0.203  Sum_probs=32.0

Q ss_pred             CCeEEEEeccccccCCCCCChHHHHHHHHHHHHhCCccEEEeCCcccceEEee
Q 024595          142 AKWKIVVGHHTIKSAGHHGVTKELLLRLLPILEENNVDMYVNGHDHCLQHISS  194 (265)
Q Consensus       142 ~~~~iv~~H~P~~~~~~~~~~~~~~~~l~~~~~~~~v~~vl~GH~H~~~~~~~  194 (265)
                      ...+|+++|--.....   ........+...+...++++|+.||.|..+....
T Consensus       175 ~D~vIv~~H~G~e~~~---~p~~~~~~la~~l~~~G~D~IiG~H~Hv~q~~E~  224 (239)
T cd07381         175 ADIVIVSLHWGVEYSY---YPTPEQRELARALIDAGADLVIGHHPHVLQGIEI  224 (239)
T ss_pred             CCEEEEEecCcccCCC---CCCHHHHHHHHHHHHCCCCEEEcCCCCcCCCeEE
Confidence            6788899997432211   1112223455555557899999999999876554

CapA is one of three membrane-associated enzymes in Bacillus anthracis that is required for synthesis of gamma-polyglutamic acid (PGA), a major component of the bacterial capsule. The YwtB and PgsA proteins of Bacillus subtilis are closely related to CapA and are also included in this alignment model. CapA belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal

>KOG3947 consensus Phosphoesterases [General function prediction only]

Probab=91.69  E-value=2.4  Score=34.71  Aligned_cols=53  Identities=19%  Similarity=0.234  Sum_probs=32.8

Q ss_pred             CCCeEEEEeccccccCCCC-----CChHHHHHHHHHHHHh-CCccEEEeCCcccceEEee
Q 024595          141 KAKWKIVVGHHTIKSAGHH-----GVTKELLLRLLPILEE-NNVDMYVNGHDHCLQHISS  194 (265)
Q Consensus       141 ~~~~~iv~~H~P~~~~~~~-----~~~~~~~~~l~~~~~~-~~v~~vl~GH~H~~~~~~~  194 (265)
                      ....-++++|-|+....+.     +....+ .+|...+++ -+.++-+.||.|.......
T Consensus       211 p~~iDvL~tHtPPlG~gd~~~~~~gqr~GC-~ell~tVe~rvqpk~hVfGhvhe~~Gvta  269 (305)
T KOG3947|consen  211 PGGIDVLITHTPPLGHGDLVPVFSGQRNGC-VELLNTVERRVQPKYHVFGHVHEGHGVTA  269 (305)
T ss_pred             ccccceeccCCCCCCcchhcccccCcccCH-HHHHHhHhhccccceEEeeeeecCceeee
Confidence            3444589999998764432     111122 345555554 4678999999998854444

>cd07420 MPP_RdgC Drosophila melanogaster RdgC and related proteins, metallophosphatase domain

Probab=88.87  E-value=0.22  Score=42.11  Aligned_cols=24  Identities=8%  Similarity=0.203  Sum_probs=19.7

Q ss_pred             HHHHHHHHhCCccEEEeCCcccce
Q 024595          167 LRLLPILEENNVDMYVNGHDHCLQ  190 (265)
Q Consensus       167 ~~l~~~~~~~~v~~vl~GH~H~~~  190 (265)
                      +.....++++++++++-||.=...
T Consensus       254 ~~~~~Fl~~n~l~~IIR~He~v~~  277 (321)
T cd07420         254 DVTSKVLQKHGLSLLIRSHECKPE  277 (321)
T ss_pred             HHHHHHHHHCCCcEEEEcChhhhc
Confidence            566788999999999999995433

RdgC (retinal degeneration C) is a vertebrate serine-threonine protein phosphatase that is required to prevent light-induced retinal degeneration. In addition to its catalytic domain, RdgC has two C-terminal EF hands. Homologs of RdgC include the human phosphatases protein phosphatase with EF hands 1 and -2 (PPEF-1 and -2). PPEF-1 transcripts are present at low levels in the retina, PPEF-2 transcripts and PPEF-2 protein are present at high levels in photoreceptors. The PPP (phosphoprotein phosphatase) family, to which RdgC belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all

>cd07416 MPP_PP2B PP2B, metallophosphatase domain

Probab=87.68  E-value=0.35  Score=40.77  Aligned_cols=23  Identities=17%  Similarity=0.199  Sum_probs=19.1

Q ss_pred             HHHHHHHHhCCccEEEeCCcccc
Q 024595          167 LRLLPILEENNVDMYVNGHDHCL  189 (265)
Q Consensus       167 ~~l~~~~~~~~v~~vl~GH~H~~  189 (265)
                      +...+.++++++++++-||.=..
T Consensus       223 ~~~~~Fl~~n~l~~iiR~He~~~  245 (305)
T cd07416         223 RAVCEFLQKNNLLSIIRAHEAQD  245 (305)
T ss_pred             HHHHHHHHHcCCeEEEEeccccc
Confidence            55678899999999999999543

PP2B (calcineurin) is a unique serine/threonine protein phosphatase in its regulation by a second messenger (calcium and calmodulin). PP2B is involved in many biological processes including immune responses, the second messenger cAMP pathway, sodium/potassium ion transport in the nephron, cell cycle progression in lower eukaryotes, cardiac hypertrophy, and memory formation. PP2B is highly conserved from yeast to humans, but is absent from plants. PP2B is a heterodimer consisting of a catalytic subunit (CnA) and a regulatory subunit (CnB); CnB contains four Ca2+ binding motifs referred to as EF hands. The PPP (phosphoprotein phosphatase) family, to which PP2B belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -G

>smart00156 PP2Ac Protein phosphatase 2A homologues, catalytic domain

Probab=87.41  E-value=0.36  Score=39.95  Aligned_cols=22  Identities=18%  Similarity=0.318  Sum_probs=18.7

Q ss_pred             HHHHHHHHhCCccEEEeCCccc
Q 024595          167 LRLLPILEENNVDMYVNGHDHC  188 (265)
Q Consensus       167 ~~l~~~~~~~~v~~vl~GH~H~  188 (265)
                      +.+...++++++++++-||.=.
T Consensus       201 ~~~~~Fl~~n~l~~iiR~He~~  222 (271)
T smart00156      201 DAVDEFLKKNNLKLIIRAHQVV  222 (271)
T ss_pred             HHHHHHHHHCCCeEEEecCccc
Confidence            5677899999999999999843

Large family of serine/threonine phosphatases, that includes PP1, PP2A and PP2B (calcineurin) family members.

>cd07415 MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein phosphatases, metallophosphatase domain

Probab=86.00  E-value=0.36  Score=40.25  Aligned_cols=24  Identities=8%  Similarity=0.144  Sum_probs=19.9

Q ss_pred             HHHHHHHHhCCccEEEeCCcccce
Q 024595          167 LRLLPILEENNVDMYVNGHDHCLQ  190 (265)
Q Consensus       167 ~~l~~~~~~~~v~~vl~GH~H~~~  190 (265)
                      +.+...+++.++++++-||.-...
T Consensus       215 ~~~~~Fl~~n~l~~iiR~He~~~~  238 (285)
T cd07415         215 DVVEEFNHNNGLTLICRAHQLVME  238 (285)
T ss_pred             HHHHHHHHHCCCeEEEEcCccccc
Confidence            567788999999999999995543

PP2A-like family of phosphoprotein phosphatases (PPP's) including PP4 and PP6. PP2A (Protein phosphatase 2A) is a critical regulator of many cellular activities. PP2A comprises about 1% of total cellular proteins. PP2A, together with protein phosphatase 1 (PP1), accounts for more than 90% of all serine/threonine phosphatase activities in most cells and tissues. The PP2A subunit in addition to having a catalytic domain homologous to PP1, has a unique C-terminal tail, containing a motif that is conserved in the catalytic subunits of all PP2A-like phosphatases including PP4 and PP6, and has an important role in PP2A regulation. The PP2A-like family of phosphatases all share a similar heterotrimeric architecture, that includes: a 65kDa scaffolding subunit (A), a 36kDa catalytic subunit (C), and one of 18 regulatory subunits (B). The PPP (phosphoprotein phosphatase) family, to which PP2

>cd07390 MPP_AQ1575 Aquifex aeolicus AQ1575 and related proteins, metallophosphatase domain

Probab=85.74  E-value=0.91  Score=34.55  Aligned_cols=36  Identities=17%  Similarity=0.160  Sum_probs=24.6

Q ss_pred             CCeEEEEeccccccCCCCCChHHHHHHHHHHHHhCCccEEEeCCcccceEEe
Q 024595          142 AKWKIVVGHHTIKSAGHHGVTKELLLRLLPILEENNVDMYVNGHDHCLQHIS  193 (265)
Q Consensus       142 ~~~~iv~~H~P~~~~~~~~~~~~~~~~l~~~~~~~~v~~vl~GH~H~~~~~~  193 (265)
                      ....|+++|.|.....  .              ..+.+++++||+|......
T Consensus       106 ~~~~i~l~H~~~~~~~--~--------------~~~~d~vi~GHtH~~~~~~  141 (168)
T cd07390         106 GGRRVYLSHYPILEWN--G--------------LDRGSWNLHGHIHSNSPDI  141 (168)
T ss_pred             CCEEEEEEeCCcccCC--C--------------CCCCeEEEEeeeCCCCCCC
Confidence            4568999997643211  0              2456899999999987543

This family includes bacterial and archeal proteins homologous to AQ1575, an uncharacterized Aquifex aeolicus protein. AQ1575 may play an accessory role in DNA repair, based on the close proximity of its gene to Holliday junction resolvasome genes. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a d

>cd07419 MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase and related proteins, C-terminal metallophosphatase domain

Probab=85.65  E-value=0.47  Score=40.14  Aligned_cols=20  Identities=35%  Similarity=0.614  Sum_probs=17.9

Q ss_pred             HHHHHHHHhCCccEEEeCCc
Q 024595          167 LRLLPILEENNVDMYVNGHD  186 (265)
Q Consensus       167 ~~l~~~~~~~~v~~vl~GH~  186 (265)
                      +.+...+++.++++++-||.
T Consensus       243 ~~~~~Fl~~n~l~~iiRgHe  262 (311)
T cd07419         243 DRVHRFLEENDLQMIIRAHE  262 (311)
T ss_pred             HHHHHHHHHCCCeEEEEech
Confidence            56778899999999999998

Bsu1 encodes a nuclear serine-threonine protein phosphatase found in plants and protozoans. Bsu1 has a C-terminal phosphatase domain and an N-terminal Kelch-repeat domain. Bsu1 is preferentially expressed in elongating plant cells. It modulates the phosphorylation state of Bes1, a transcriptional regulator phosphorylated by the glycogen synthase kinase Bin2, as part of a steroid hormone signal transduction pathway. The PPP (phosphoprotein phosphatase) family, to which Bsu1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most

>cd07417 MPP_PP5_C PP5, C-terminal metallophosphatase domain

Probab=85.23  E-value=0.42  Score=40.47  Aligned_cols=24  Identities=25%  Similarity=0.259  Sum_probs=19.7

Q ss_pred             HHHHHHHHhCCccEEEeCCcccce
Q 024595          167 LRLLPILEENNVDMYVNGHDHCLQ  190 (265)
Q Consensus       167 ~~l~~~~~~~~v~~vl~GH~H~~~  190 (265)
                      +.+...+++.++++++-||.=...
T Consensus       234 ~~~~~Fl~~n~l~~iiR~He~~~~  257 (316)
T cd07417         234 DVTKRFLEENNLEYIIRSHEVKDE  257 (316)
T ss_pred             HHHHHHHHHcCCcEEEECCcccce
Confidence            566788999999999999995543

Serine/threonine protein phosphatase-5 (PP5) is a member of the PPP gene family of protein phosphatases that is highly conserved among eukaryotes and widely expressed in mammalian tissues. PP5 has a C-terminal phosphatase domain and an extended N-terminal TPR (tetratricopeptide repeat) domain containing three TPR motifs. The PPP (phosphoprotein phosphatase) family, to which PP5 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cel

>PTZ00480 serine/threonine-protein phosphatase; Provisional

Probab=84.87  E-value=0.63  Score=39.43  Aligned_cols=23  Identities=13%  Similarity=0.208  Sum_probs=19.5

Q ss_pred             HHHHHHHHhCCccEEEeCCcccc
Q 024595          167 LRLLPILEENNVDMYVNGHDHCL  189 (265)
Q Consensus       167 ~~l~~~~~~~~v~~vl~GH~H~~  189 (265)
                      +.+...+++++.++++-||.-..
T Consensus       232 ~~~~~Fl~~n~l~~IiR~Hq~v~  254 (320)
T PTZ00480        232 EIVQVFLKKHELDLICRAHQVVE  254 (320)
T ss_pred             HHHHHHHHhCCCcEEEEcCcccc
Confidence            56778899999999999999654

>cd07418 MPP_PP7 PP7, metallophosphatase domain

Probab=84.80  E-value=0.52  Score=40.80  Aligned_cols=20  Identities=25%  Similarity=0.393  Sum_probs=18.1

Q ss_pred             HHHHHHHHhCCccEEEeCCc
Q 024595          167 LRLLPILEENNVDMYVNGHD  186 (265)
Q Consensus       167 ~~l~~~~~~~~v~~vl~GH~  186 (265)
                      +.+...++++++++++-||.
T Consensus       274 ~~~~~FL~~n~l~~IIRsHe  293 (377)
T cd07418         274 DCTEEFLEKNNLKLIIRSHE  293 (377)
T ss_pred             HHHHHHHHHcCCcEEEECCC
Confidence            56788999999999999999

PP7 is a plant phosphoprotein phosphatase that is highly expressed in a subset of stomata and thought to play an important role in sensory signaling. PP7 acts as a positive regulator of signaling downstream of cryptochrome blue light photoreceptors. PP7 also controls amplification of phytochrome signaling, and interacts with nucleotidediphosphate kinase 2 (NDPK2), a positive regulator of phytochrome signalling. In addition, PP7 interacts with heat shock transcription factor HSF and up-regulates protective heat shock proteins. PP7 may also play a role in salicylic acid-dependent defense signaling. The PPP (phosphoprotein phosphatase) family, to which PP7 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-,

>PTZ00244 serine/threonine-protein phosphatase PP1; Provisional

Probab=84.17  E-value=0.48  Score=39.70  Aligned_cols=23  Identities=17%  Similarity=0.164  Sum_probs=19.4

Q ss_pred             HHHHHHHHhCCccEEEeCCcccc
Q 024595          167 LRLLPILEENNVDMYVNGHDHCL  189 (265)
Q Consensus       167 ~~l~~~~~~~~v~~vl~GH~H~~  189 (265)
                      +.+...+++.++++++-||.-..
T Consensus       225 ~~~~~Fl~~n~l~~iiR~Hq~~~  247 (294)
T PTZ00244        225 DIVNDFLDMVDMDLIVRAHQVME  247 (294)
T ss_pred             HHHHHHHHHcCCcEEEEcCcccc
Confidence            56778899999999999999554

>cd07414 MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzymes, and related proteins, metallophosphatase domain

Probab=83.59  E-value=0.6  Score=39.12  Aligned_cols=24  Identities=13%  Similarity=0.236  Sum_probs=19.8

Q ss_pred             HHHHHHHHhCCccEEEeCCcccce
Q 024595          167 LRLLPILEENNVDMYVNGHDHCLQ  190 (265)
Q Consensus       167 ~~l~~~~~~~~v~~vl~GH~H~~~  190 (265)
                      +.+...+++.+.++++-||.-...
T Consensus       223 ~~~~~Fl~~n~l~~iiR~He~~~~  246 (293)
T cd07414         223 DVVAKFLNKHDLDLICRAHQVVED  246 (293)
T ss_pred             HHHHHHHHHcCCeEEEECCccccC
Confidence            567788999999999999996543

PP1 (protein phosphatase type 1) is a serine/threonine phosphatase that regulates many cellular processes including: cell-cycle progression, protein synthesis, muscle contraction, carbohydrate metabolism, transcription and neuronal signaling, through its interaction with at least 180 known targeting proteins. PP1 occurs in all tissues and regulates many pathways, ranging from cell-cycle progression to carbohydrate metabolism. Also included here are the PPKL (PP1 and kelch-like) enzymes including the PPQ, PPZ1, and PPZ2 fungal phosphatases. These PPKLs have a large N-terminal kelch repeat in addition to a C-terminal phosphoesterase domain. The PPP (phosphoprotein phosphatase) family, to which PP1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, Rdg

>PTZ00239 serine/threonine protein phosphatase 2A; Provisional

Probab=82.86  E-value=0.72  Score=38.80  Aligned_cols=24  Identities=8%  Similarity=0.131  Sum_probs=19.9

Q ss_pred             HHHHHHHHhCCccEEEeCCcccce
Q 024595          167 LRLLPILEENNVDMYVNGHDHCLQ  190 (265)
Q Consensus       167 ~~l~~~~~~~~v~~vl~GH~H~~~  190 (265)
                      +.+...+++.++++++-||.-...
T Consensus       216 ~~~~~Fl~~n~l~~iiR~He~~~~  239 (303)
T PTZ00239        216 KVTKEFCRLNDLTLICRAHQLVME  239 (303)
T ss_pred             HHHHHHHHHCCCcEEEEcChhhcc
Confidence            567788999999999999996543

>PF04042 DNA_pol_E_B: DNA polymerase alpha/epsilon subunit B; InterPro: IPR007185 DNA polymerase epsilon is essential for cell viability and chromosomal DNA replication in budding yeast

Probab=81.82  E-value=0.45  Score=37.57  Aligned_cols=56  Identities=18%  Similarity=0.057  Sum_probs=27.7

Q ss_pred             ccCCCEEEecCCccCCCCCCC-------CCC--hhhhhhcccccCCCCCCCceEEcCCCcccCCC
Q 024595            7 KLEIDFVISTGDNFYEDGLTG-------EED--PAFLDSFTSIYTAPSLQKQWYNVLGNHDYRGD   62 (265)
Q Consensus         7 ~~~pd~vv~~GD~~~~~g~~~-------~~~--~~~~~~~~~~~~~~~l~~p~~~i~GNHD~~~~   62 (265)
                      +.+|+.+|++|+.+.......       ...  ......+...+..-.-.+++++|||+||....
T Consensus        29 ~~~p~~lIl~G~fi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~vvlvPg~~D~~~~   93 (209)
T PF04042_consen   29 ASKPDVLILMGPFIDSPHPYISSGSVPDSYSFEEDFLKELDSFLESILPSTQVVLVPGPNDPTSS   93 (209)
T ss_dssp             CTTECEEEEES-SCBTTSHHHHHT---HHCCHHHHHHHHCHHHHCCCHCCSEEEEE--TTCTT-S
T ss_pred             cCCCcEEEEeCCCcCccccccccccccccccccHHHHHHHHHHHhhcccccEEEEeCCCcccccc
Confidence            678999999999984221100       000  11111112222211126899999999998654

In addition, DNA polymerase epsilon may be involved in DNA repair and cell-cycle checkpoint control. The enzyme consists of at least four subunits in mammalian cells as well as in yeast. The largest subunit of DNA polymerase epsilon is responsible for polymerase activity. In mouse, the DNA polymerase epsilon subunit B is the second largest subunit of the DNA polymerase. A part of the N-terminal was found to be responsible for the interaction with SAP18. Experimental evidence suggests that this subunit may recruit histone deacetylase to the replication fork to modify the chromatin structure [].; GO: 0003677 DNA binding, 0003887 DNA-directed DNA polymerase activity, 0006260 DNA replication; PDB: 3E0J_C 3FLO_G.

>PRK09968 serine/threonine-specific protein phosphatase 2; Provisional

Probab=80.72  E-value=2.3  Score=33.97  Aligned_cols=41  Identities=34%  Similarity=0.490  Sum_probs=25.7

Q ss_pred             ccCCCEEEecCCccCCCCCCCCCChhhhhhcccccCCCCCCCceEEcCCCccc
Q 024595            7 KLEIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQKQWYNVLGNHDY   59 (265)
Q Consensus         7 ~~~pd~vv~~GD~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~p~~~i~GNHD~   59 (265)
                      ..+.|.++++||++ +.|..      -.+.+..+.     ...++.+.||||.
T Consensus        40 ~~~~d~l~~lGD~v-drG~~------~~~~l~~l~-----~~~~~~v~GNHE~   80 (218)
T PRK09968         40 CPETDLLISVGDNI-DRGPE------SLNVLRLLN-----QPWFISVKGNHEA   80 (218)
T ss_pred             CCCCCEEEECCCCc-CCCcC------HHHHHHHHh-----hCCcEEEECchHH
Confidence            34689999999999 44522      112222211     1246799999995

>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]

Probab=80.17  E-value=7.4  Score=33.57  Aligned_cols=62  Identities=23%  Similarity=0.285  Sum_probs=40.6

Q ss_pred             HHHHHHHhhcCCCCeEEEEeccccccCCCCCChHHHHHHHHHHHHhCCc---------cEEEeCCcccceEEee
Q 024595          130 LKDVDGALKNSKAKWKIVVGHHTIKSAGHHGVTKELLLRLLPILEENNV---------DMYVNGHDHCLQHISS  194 (265)
Q Consensus       130 ~~wl~~~l~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~l~~~~~~~~v---------~~vl~GH~H~~~~~~~  194 (265)
                      ++-|++.+...+.+--|+..-|.|.+..+   ..+....+.+++++++|         ++|+.||.|.......
T Consensus       147 ~~~LE~~~~~~~vkl~iLCnPHNP~Grvw---t~eeL~~i~elc~kh~v~VISDEIHaDlv~~g~~h~~~a~ls  217 (388)
T COG1168         147 FDALEKAFVDERVKLFILCNPHNPTGRVW---TKEELRKIAELCLRHGVRVISDEIHADLVLGGHKHIPFASLS  217 (388)
T ss_pred             HHHHHHHHhcCCccEEEEeCCCCCCCccc---cHHHHHHHHHHHHHcCCEEEeecccccccccCCCccchhhcC
Confidence            56688888776544444544454443333   23445678889999987         6889999998765433

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	265
1ute_A	313	Pig Purple Acid Phosphatase Complexed With Phosphat		7e-18
1qhw_A	327	Purple Acid Phosphatase From Rat Bone Length = 327		1e-17
1qfc_A	306	Structure Of Rat Purple Acid Phosphatase Length = 3		1e-17
2bq8_X	304	Crystal Structure Of Human Purple Acid Phosphatase		2e-17
1war_A	310	Recombinant Human Purple Acid Phosphatase Expressed		3e-17
3tgh_A	342	Gap50 The Anchor In The Inner Membrane Complex Of P		1e-04

>pdb|1UTE|A Chain A, Pig Purple Acid Phosphatase Complexed With Phosphate Length = 313

Iteration: 1
 Score = 87.4 bits (215), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 73/281 (25%), Positives = 128/281 (45%), Gaps = 43/281 (15%)
Query: 6   EKLEIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQK-QWYNVLGNHDYRGDVE 64
           + L  DF++S GDNFY  G+   +D  F ++F  +++ PSL+   W+ + GNHD+ G+V 
Sbjct: 40  KTLGADFILSLGDNFYFTGVHDAKDKRFQETFEDVFSDPSLRNVPWHVLAGNHDHLGNVS 99
Query: 65  AQLSPVLTRKDSRWLCSRSF------ILDAEIAEFVFV--------DTTPFVDEYFEDPG 110
           AQ++   ++   RW     +      I  + ++  +F+        ++  FV +  E P 
Sbjct: 100 AQIA--YSKISKRWNFPSPYYRLRFKIPRSNVSVAIFMLDTVTLCGNSDDFVSQQPERP- 156
Query: 111 DSTYDWRGVYRRKEYLSDLLKDVDGALKNSKAKWKIVVGHHTIKSAGHHGVTKXXXXXXX 170
                 R +   +  L+ + K +  A    K  + +V GH+ + S   HG T        
Sbjct: 157 ------RNLALARTQLAWIKKQLAAA----KEDYVLVAGHYPVWSIAEHGPTHCLVKQLL 206
Query: 171 XXXXXNNVDMYVNGHDHCLQHIS-SNGIEFLTSGGGS------KAWRGDRNWWSPEELKL 223
                + V  Y+ GHDH LQ++   NG+ F+ SG G+      K  R   N +    L+ 
Sbjct: 207 PLLTTHKVTAYLCGHDHNLQYLQDENGLGFVLSGAGNFMDPSKKHLRKVPNGY----LRF 262
Query: 224 YYDGQ----GFMSVKMTRSEAVVLFYDVHGNILHKWSIPKE 260
           ++  +    GF  V++T  E  V + +  G  L K  +P+ 
Sbjct: 263 HFGAENSLGGFAYVEITPKEMSVTYIEASGKSLFKTKLPRR 303

>pdb|1QHW|A Chain A, Purple Acid Phosphatase From Rat Bone Length = 327

Iteration: 1
 Score = 86.7 bits (213), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 75/273 (27%), Positives = 124/273 (45%), Gaps = 35/273 (12%)
Query: 11  DFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQK-QWYNVLGNHDYRGDVEAQLSP 69
           DF++S GDNFY  G+    D  F ++F  +++  +L+   WY + GNHD+ G+V AQ++ 
Sbjct: 66  DFIMSLGDNFYFTGVHDANDKRFQETFEDVFSDRALRNIPWYVLAGNHDHLGNVSAQIA- 124
Query: 70  VLTRKDSRWLCSRSF------ILDAEIAEFVFV--------DTTPFVDEYFEDPGDSTYD 115
             ++   RW     +      +  + I   +F+        ++  FV +  E P D    
Sbjct: 125 -YSKISKRWNFPSPYYRLRFKVPRSNITVAIFMLDTVMLCGNSDDFVSQQPEMPRD---- 179
Query: 116 WRGVYRRKEYLSDLLKDVDGALKNSKAKWKIVVGHHTIKSAGHHGVTKXXXXXXXXXXXX 175
             GV R +  LS L K +  A    K  + +V GH+ I S   HG T+            
Sbjct: 180 -LGVARTQ--LSWLKKQLAAA----KEDYVLVAGHYPIWSIAEHGPTRCLVKNLRPLLAA 232
Query: 176 NNVDMYVNGHDHCLQHIS-SNGIEFLTSGGGSKAWRGDRNWWSPEE--LKLYYDGQ---- 228
             V  Y+ GHDH LQ++   NG+ ++ SG G+      R+        L+ +Y  +    
Sbjct: 233 YGVTAYLCGHDHNLQYLQDENGVGYVLSGAGNFMDPSVRHQRKVPNGYLRFHYGSEDSLG 292
Query: 229 GFMSVKMTRSEAVVLFYDVHGNILHKWSIPKEP 261
           GF  V++   E  + + +  G  L K S+P+ P
Sbjct: 293 GFTYVEIGSKEMSITYVEASGKSLFKTSLPRRP 325

>pdb|1QFC|A Chain A, Structure Of Rat Purple Acid Phosphatase Length = 306

Iteration: 1
 Score = 86.7 bits (213), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 76/277 (27%), Positives = 126/277 (45%), Gaps = 43/277 (15%)
Query: 11  DFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQK-QWYNVLGNHDYRGDVEAQLSP 69
           DF++S GDNFY  G+    D  F ++F  +++  +L+   WY + GNHD+ G+V AQ++ 
Sbjct: 45  DFIMSLGDNFYFTGVHDANDKRFQETFEDVFSDRALRNIPWYVLAGNHDHLGNVSAQIA- 103
Query: 70  VLTRKDSRWLCSRSF------ILDAEIAEFVFV--------DTTPFVDEYFEDPGDSTYD 115
             ++   RW     +      +  + I   +F+        ++  FV +  E P D    
Sbjct: 104 -YSKISKRWNFPSPYYRLRFKVPRSNITVAIFMLDTVMLCGNSDDFVSQQPEMPRD---- 158
Query: 116 WRGVYRRKEYLSDLLKDVDGALKNSKAKWKIVVGHHTIKSAGHHGVTKXXXXXXXXXXXX 175
             GV R +  LS L K +  A    K  + +V GH+ I S   HG T+            
Sbjct: 159 -LGVARTQ--LSWLKKQLAAA----KEDYVLVAGHYPIWSIAEHGPTRCLVKNLRPLLAA 211
Query: 176 NNVDMYVNGHDHCLQHIS-SNGIEFLTSGGGS------KAWRGDRNWWSPEELKLYYDGQ 228
             V  Y+ GHDH LQ++   NG+ ++ SG G+      +  R   N +    L+ +Y  +
Sbjct: 212 YGVTAYLCGHDHNLQYLQDENGVGYVLSGAGNFMDPSVRHQRKVPNGY----LRFHYGSE 267
Query: 229 ----GFMSVKMTRSEAVVLFYDVHGNILHKWSIPKEP 261
               GF  V++   E  + + +  G  L K S+P+ P
Sbjct: 268 DSLGGFTYVEIGSKEMSITYVEASGKSLFKTSLPRRP 304

>pdb|2BQ8|X Chain X, Crystal Structure Of Human Purple Acid Phosphatase With An Inhibitory Conformation Of The Repression Loop Length = 304

Iteration: 1
 Score = 85.9 bits (211), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 73/275 (26%), Positives = 122/275 (44%), Gaps = 35/275 (12%)
Query: 8   LEIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQK-QWYNVLGNHDYRGDVEAQ 66
           L  DF++S GDNFY  G+    D  F ++F  +++  SL+K  WY + GNHD+ G+V AQ
Sbjct: 40  LGADFILSLGDNFYFTGVQDINDKRFQETFEDVFSDRSLRKVPWYVLAGNHDHLGNVSAQ 99
Query: 67  LSPVLTRKDSRWLCSRSF------ILDAEIAEFVFV--------DTTPFVDEYFEDPGDS 112
           ++   ++   RW     F      I    ++  +F+        ++  F+ +  E P   
Sbjct: 100 IA--YSKISKRWNFPSPFYRLHFKIPQTNVSVAIFMLDTVTLCGNSDDFLSQQPERP--- 154
Query: 113 TYDWRGVYRRKEYLSDLLKDVDGALKNSKAKWKIVVGHHTIKSAGHHGVTKXXXXXXXXX 172
               R V   +  LS L K +  A    +  + +V GH+ + S   HG T          
Sbjct: 155 ----RDVKLARTQLSWLKKQLAAA----REDYVLVAGHYPVWSIAEHGPTHCLVKQLRPL 206
Query: 173 XXXNNVDMYVNGHDHCLQHIS-SNGIEFLTSGGGSKAWRGDRNWWSPEE--LKLYYDGQ- 228
                V  Y+ GHDH LQ++   NG+ ++ SG G+      R+        L+ +Y  + 
Sbjct: 207 LATYGVTAYLCGHDHNLQYLQDENGVGYVLSGAGNFMDPSKRHQRKVPNGYLRFHYGTED 266
Query: 229 ---GFMSVKMTRSEAVVLFYDVHGNILHKWSIPKE 260
              GF  V+++  E  V + +  G  L K  +P+ 
Sbjct: 267 SLGGFAYVEISSKEMTVTYIEASGKSLFKTRLPRR 301

>pdb|1WAR|A Chain A, Recombinant Human Purple Acid Phosphatase Expressed In Pichia Pastoris Length = 310

Iteration: 1
 Score = 85.5 bits (210), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 73/275 (26%), Positives = 122/275 (44%), Gaps = 35/275 (12%)
Query: 8   LEIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQK-QWYNVLGNHDYRGDVEAQ 66
           L  DF++S GDNFY  G+    D  F ++F  +++  SL+K  WY + GNHD+ G+V AQ
Sbjct: 46  LGADFILSLGDNFYFTGVQDINDKRFQETFEDVFSDRSLRKVPWYVLAGNHDHLGNVSAQ 105
Query: 67  LSPVLTRKDSRWLCSRSF------ILDAEIAEFVFV--------DTTPFVDEYFEDPGDS 112
           ++   ++   RW     F      I    ++  +F+        ++  F+ +  E P   
Sbjct: 106 IA--YSKISKRWNFPSPFYRLHFKIPQTNVSVAIFMLDTVTLCGNSDDFLSQQPERP--- 160
Query: 113 TYDWRGVYRRKEYLSDLLKDVDGALKNSKAKWKIVVGHHTIKSAGHHGVTKXXXXXXXXX 172
               R V   +  LS L K +  A    +  + +V GH+ + S   HG T          
Sbjct: 161 ----RDVKLARTQLSWLKKQLAAA----REDYVLVAGHYPVWSIAEHGPTHCLVKQLRPL 212
Query: 173 XXXNNVDMYVNGHDHCLQHIS-SNGIEFLTSGGGSKAWRGDRNWWSPEE--LKLYYDGQ- 228
                V  Y+ GHDH LQ++   NG+ ++ SG G+      R+        L+ +Y  + 
Sbjct: 213 LATYGVTAYLCGHDHNLQYLQDENGVGYVLSGAGNFMDPSKRHQRKVPNGYLRFHYGTED 272
Query: 229 ---GFMSVKMTRSEAVVLFYDVHGNILHKWSIPKE 260
              GF  V+++  E  V + +  G  L K  +P+ 
Sbjct: 273 SLGGFAYVEISSKEMTVTYIEASGKSLFKTRLPRR 307

>pdb|3TGH|A Chain A, Gap50 The Anchor In The Inner Membrane Complex Of Plasmodium Length = 342

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 54/235 (22%), Positives = 95/235 (40%), Gaps = 51/235 (21%)
Query: 9   EIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPS--LQKQWYNVLGNHDYRGDVEAQ 66
            + F++S G NF  DG+ G  DPA+ + +  +Y+     +   ++ VLG  D+ G+  AQ
Sbjct: 34  RVTFIVSPGSNFI-DGVKGLNDPAWKNLYEDVYSEEKGDMYMPFFTVLGTRDWTGNYNAQ 92
Query: 67  L-----------SPVLTRKDS------RWLCSR-------SFILDAE-----------IA 91
           L                 KD+      +W+           F + +             A
Sbjct: 93  LLKGQGIYIEKNGETSIEKDADATNYPKWIMPNYWYHYFTHFTVSSGPSIVKTGHKDLAA 152
Query: 92  EFVFVDTTPFVDEYFEDPGDSTYDWRGVYRRKEYLSDLLKDVDGALKNSKAKWKIVVGHH 151
            F+F+DT             S + ++ ++ +    +DL   +  A K   A + IVVG  
Sbjct: 153 AFIFIDTWVL---------SSNFPYKKIHEKA--WNDLKSQLSVAKK--IADFIIVVGDQ 199
Query: 152 TIKSAGHHGVTKXXXXXXXXXXXXNNVDMYVNGHDHCLQHISSNGIEFLTSGGGS 206
            I S+G+   +               VD+Y++GHD+ ++ I  N +  +T G GS
Sbjct: 200 PIYSSGYSRGSSYLAYYLLPLLKDAEVDLYISGHDNNMEVIEDNDMAHITCGSGS 254

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	265
1ute_A	313	Protein (II purple acid phosphatase); tartrate res	4e-73
3tgh_A	342	Glideosome-associated protein 50; phosphatase fold	4e-54
1xzw_A	426	Purple acid phosphatase; hydrolase; HET: NAG FUC M	5e-12
2qfp_A	424	Purple acid phosphatase; binuclear, Fe-Zn, hydrola	3e-11
3ib7_A	330	ICC protein; metallophosphoesterase, alpha-beta fo	6e-11
2nxf_A	322	Putative dimetal phosphatase; dinuclear metal cent	9e-11
2xmo_A	443	LMO2642 protein; phosphodiesterase, hydrolase; 1.7	8e-09
3d03_A	274	Phosphohydrolase; glycerophosphodiesterase, metall	4e-08

>1ute_A Protein (II purple acid phosphatase); tartrate resistant acid phosphatase metalloenzyme, uteroferrin, hydrolase; HET: NAG; 1.55A {Sus scrofa} SCOP: d.159.1.1 PDB: 1war_A* 2bq8_X 1qfc_A* 1qhw_A* Length = 313

 Score =  225 bits (574), Expect = 4e-73
 Identities = 73/274 (26%), Positives = 126/274 (45%), Gaps = 17/274 (6%)

Query: 1   MGLIGEKLEIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQK-QWYNVLGNHDY 59
           +    + L  DF++S GDNFY  G+   +D  F ++F  +++ PSL+   W+ + GNHD+
Sbjct: 35  IATTVKTLGADFILSLGDNFYFTGVHDAKDKRFQETFEDVFSDPSLRNVPWHVLAGNHDH 94

Query: 60  RGDVEAQLSPVLTRK----DSRWLCSRSFILDAEI-AEFVFVDTTPFVDEYFEDPGDSTY 114
            G+V AQ++     K     S +   R  I  + +      +DT        +       
Sbjct: 95  LGNVSAQIAYSKISKRWNFPSPYYRLRFKIPRSNVSVAIFMLDTVTLCGNSDDFVSQQPE 154

Query: 115 DWRGVYRRKEYLSDLLKDVDGALKNSKAKWKIVVGHHTIKSAGHHGVTKELLLRLLPILE 174
             R +   +  L+ + K     L  +K  + +V GH+ + S   HG T  L+ +LLP+L 
Sbjct: 155 RPRNLALARTQLAWIKKQ----LAAAKEDYVLVAGHYPVWSIAEHGPTHCLVKQLLPLLT 210

Query: 175 ENNVDMYVNGHDHCLQHI-SSNGIEFLTSGGGSKAW--RGDRNWWSPEELKLYYDGQ--- 228
            + V  Y+ GHDH LQ++   NG+ F+ SG G+     +          L+ ++  +   
Sbjct: 211 THKVTAYLCGHDHNLQYLQDENGLGFVLSGAGNFMDPSKKHLRKVPNGYLRFHFGAENSL 270

Query: 229 -GFMSVKMTRSEAVVLFYDVHGNILHKWSIPKEP 261
            GF  V++T  E  V + +  G  L K  +P+  
Sbjct: 271 GGFAYVEITPKEMSVTYIEASGKSLFKTKLPRRA 304

>3tgh_A Glideosome-associated protein 50; phosphatase fold, NOT A phosphatase, motor protein, structur protein, membrane protein; 1.70A {Plasmodium falciparum 3D7} Length = 342

 Score =  177 bits (449), Expect = 4e-54
 Identities = 58/288 (20%), Positives = 112/288 (38%), Gaps = 28/288 (9%)

Query: 1   MGLIGEKLEIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPS--LQKQWYNVLGNHD 58
                +   + F++S G NF  DG+ G  DPA+ + +  +Y+     +   ++ VLG  D
Sbjct: 26  FKQFIKNERVTFIVSPGSNFI-DGVKGLNDPAWKNLYEDVYSEEKGDMYMPFFTVLGTRD 84

Query: 59  YRGDVEAQLSPVL-----------------TRKDSRWLCSRSF---ILDAEIAEFVFVDT 98
           + G+  AQL                          +W+    +        ++    +  
Sbjct: 85  WTGNYNAQLLKGQGIYIEKNGETSIEKDADATNYPKWIMPNYWYHYFTHFTVSSGPSIVK 144

Query: 99  TPFVDEYFEDPGDSTYDWRGVYRRKEYLSDLLKDVDGALK--NSKAKWKIVVGHHTIKSA 156
           T   D         T+     +  K+       D+   L      A + IVVG   I S+
Sbjct: 145 TGHKDLAAAFIFIDTWVLSSNFPYKKIHEKAWNDLKSQLSVAKKIADFIIVVGDQPIYSS 204

Query: 157 GHHGVTKELLLRLLPILEENNVDMYVNGHDHCLQHISSNGIEFLTSGGGSKAWRGDRNWW 216
           G+   +  L   LLP+L++  VD+Y++GHD+ ++ I  N +  +T G GS +    ++  
Sbjct: 205 GYSRGSSYLAYYLLPLLKDAEVDLYISGHDNNMEVIEDNDMAHITCGSGSMSQ--GKSGM 262

Query: 217 SPEELKLYYDGQGFMSVKMTRSEAVVLFYDVH-GNILHKWSIPKEPLK 263
              +   +    GF   +++ +  V  F     G +++   +  +  K
Sbjct: 263 KNSKSLFFSSDIGFCVHELSNNGIVTKFVSSKKGEVIYTHKLNIKKKK 310

>1xzw_A Purple acid phosphatase; hydrolase; HET: NAG FUC MAN; 2.50A {Ipomoea batatas} SCOP: b.1.12.1 d.159.1.1 Length = 426

 Score = 64.3 bits (156), Expect = 5e-12
 Identities = 27/200 (13%), Positives = 58/200 (29%), Gaps = 30/200 (15%)

Query: 3   LIGEKLEIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQKQWYNVLGNHDYRGD 62
                 +   V+  GD  Y +     ++  + D++          + W    GNH+    
Sbjct: 148 YEQNSAKGQAVLFMGDLSYSNRWPNHDNNRW-DTWGRFSERSVAYQPWIWTAGNHEIDYA 206

Query: 63  VEAQLSPVLTRKDSRW---------LCSRSFILDAEIAEFVFVDTTPFVDEYFEDPGDST 113
            +           +R+              + +    A  + + +               
Sbjct: 207 PDIGEYQPFVPFTNRYPTPHEASGSGDPLWYAIKRASAHIIVLSS-----YSGFVKYSPQ 261

Query: 114 YDWRGVYRRKEYLSDLLKDVDGALKNSKAKWKIVVGHHTIKS--AGHHGVTKELLLRLLP 171
           Y W          +  L+ V+     S+  W IV+ H  + +    H+   + +     P
Sbjct: 262 YKW---------FTSELEKVN----RSETPWLIVLVHAPLYNSYEAHYMEGEAMRAIFEP 308

Query: 172 ILEENNVDMYVNGHDHCLQH 191
                 VD+  +GH H  + 
Sbjct: 309 YFVYYKVDIVFSGHVHSYER 328

>2qfp_A Purple acid phosphatase; binuclear, Fe-Zn, hydrolase; HET: NAG NDG; 2.20A {Phaseolus vulgaris} SCOP: b.1.12.1 d.159.1.1 PDB: 2qfr_A* 1kbp_A* 3kbp_A* 4kbp_A* Length = 424

 Score = 61.6 bits (149), Expect = 3e-11
 Identities = 36/240 (15%), Positives = 67/240 (27%), Gaps = 49/240 (20%)

Query: 9   EIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQKQWYNVLGNHDYRGDVEAQLS 68
           +   V+  GD  Y D     ++  + D++          + W    GNH+     E   +
Sbjct: 147 KGQTVLFVGDLSYADRYPNHDNVRW-DTWGRFTERSVAYQPWIWTAGNHEIEFAPEINET 205

Query: 69  PVLTRKDSRW---------LCSRSFILDAEIAEFVFVDTTPFVDEYFEDPGDSTYDWRGV 119
                   R+              + +    A  + + +           G   Y W   
Sbjct: 206 EPFKPFSYRYHVPYEASQSTSPFWYSIKRASAHIIVLSS-----YSAYGRGTPQYTW--- 257

Query: 120 YRRKEYLSDLLKDVDGALKNSKAKWKIVVGHHTIKSAGHHGVTKELLLR--LLPILEENN 177
                 L   L+ V      S+  W IV+ H  + ++ +H   +   +R        +  
Sbjct: 258 ------LKKELRKVK----RSETPWLIVLMHSPLYNSYNHHFMEGEAMRTKFEAWFVKYK 307

Query: 178 VDMYVNGHDHCLQH-------------------ISSNGIEFLTSGGGSKAWRGDRNWWSP 218
           VD+   GH H  +                       +   ++T G        D N   P
Sbjct: 308 VDVVFAGHVHAYERSERVSNIAYKITNGLCTPVKDQSAPVYITIGDAGNYGVIDSNMIQP 367

>3ib7_A ICC protein; metallophosphoesterase, alpha-beta fold, swapped-dimer, HYDR; HET: BTB; 1.60A {Mycobacterium tuberculosis} PDB: 3ib8_A* 2hy1_A 2hyp_A 2hyo_A Length = 330

 Score = 60.7 bits (147), Expect = 6e-11
 Identities = 35/203 (17%), Positives = 61/203 (30%), Gaps = 35/203 (17%)

Query: 8   LEIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIY--TAPSLQKQWYNVLGNHDYRGDVEA 65
           L  D ++ TGD      L  + +PA       +    A  L  +   V+GNHD R ++  
Sbjct: 65  LRPDAIVFTGD------LADKGEPAAYRKLRGLVEPFAAQLGAELVWVMGNHDDRAELRK 118

Query: 66  QLSPVLTRKDSRWLCSRSFILDAEIAEFVFVDTT-PFVDEYFEDPGDSTYDWRGVYRRKE 124
            L       ++  +     +   +    + +DT+ P           S   W        
Sbjct: 119 FLL-----DEAPSMAPLDRVCMIDGLRIIVLDTSVPGHHHGEIRA--SQLGW-------- 163

Query: 125 YLSDLLKDVDGALKNSKAKWKIVVGHHTIKSAGHHGVTKELLL---RLLPILEENNVDMY 181
                   +   L        I+  HH    +         L     L  +L   +V   
Sbjct: 164 --------LAEELATPAPDGTILALHHPPIPSVLDMAVTVELRDQAALGRVLRGTDVRAI 215

Query: 182 VNGHDHCLQHISSNGIEFLTSGG 204
           + GH H   + +  GI    +  
Sbjct: 216 LAGHLHYSTNATFVGIPVSVASA 238

>2nxf_A Putative dimetal phosphatase; dinuclear metal center phosphatase, metalloprotein, metallophosphoesterase, protein structure initiative; 1.70A {Danio rerio} SCOP: d.159.1.12 Length = 322

 Score = 60.0 bits (144), Expect = 9e-11
 Identities = 30/241 (12%), Positives = 63/241 (26%), Gaps = 45/241 (18%)

Query: 6   EKLEIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQKQWYNVLGNHDYRGDVEA 65
            +  +  V+  GD         +     LD+  +     +     ++V GNH++      
Sbjct: 48  RRERVQCVVQLGDIIDGHNRRRDASDRALDTVMAEL--DACSVDVHHVWGNHEFYNFSRP 105

Query: 66  QLSPVLTRKDSRWLCSRSFILDAEIA-----------EFVFVDTTPFVDEYFEDPGDSTY 114
            L         R        L  +              FV +D          +     +
Sbjct: 106 SLLSSRLNSAQRTGTDTGSDLIGDDIYAYEFSPAPNFRFVLLDAYDL-SVIGREEESEKH 164

Query: 115 DWRGVYRRKEYLSDLLKDVDGA--------------------------LKNSKAKWK--I 146
                   +   +    ++                             L  S  K +  +
Sbjct: 165 THSWRILTQHNHNLQDLNLPPVSVGLEQRFVKFNGGFSEQQLQWLDAVLTLSDHKQERVL 224

Query: 147 VVGHHTIKSAGHHGVTKELLLR-LLPILEE-NNVDMYVNGHDHCLQHIS-SNGIEFLTSG 203
           +  H  +       +        +L +L    +V  ++ GHDH     + S+G + +T  
Sbjct: 225 IFSHLPVHPCAADPICLAWNHEAVLSVLRSHQSVLCFIAGHDHDGGRCTDSSGAQHITLE 284

Query: 204 G 204
           G
Sbjct: 285 G 285

>2xmo_A LMO2642 protein; phosphodiesterase, hydrolase; 1.70A {Listeria monocytogenes} Length = 443

 Score = 54.8 bits (131), Expect = 8e-09
 Identities = 34/217 (15%), Positives = 64/217 (29%), Gaps = 44/217 (20%)

Query: 6   EKLEIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTA-PSLQKQWYNVLGNHDYRG--- 61
           E  + D +I +GD      LT   +    +      T       Q + V GNHD      
Sbjct: 89  ESKKTDVLIISGD------LTNNGEKTSHEELAKKLTQVEKNGTQVFVVPGNHDINNPWA 142

Query: 62  ----DVEAQLSPVLTRKDSRWLCSRSFILDAEIAE---------------FVFVDTTPFV 102
                 +   +  ++  D   + S     DA  ++                + +DT  + 
Sbjct: 143 RKFEKDKQLPTDTISPTDFSKIYSDFGYEDAISSDEFSLSYLAAPSSKVWLLMLDTAIYK 202

Query: 103 DEYFEDPGDSTYDWRGVYRRK--EYLSDLLKDVDGALKNSKAKWKIVVGHHTIKSAGHHG 160
               +          G       +++ +                 I V HH +       
Sbjct: 203 TNMQQGNP----TTEGGLTAGTLDWIKESSALA-----KKNGAKLIPVLHHNLTDHNDVI 253

Query: 161 VTKELLL---RLLPILEENNVDMYVNGHDHCLQHISS 194
                +    +++  L E  +D  ++GH H  Q+I S
Sbjct: 254 QKGYTINYNQQVIDALTEGAMDFSLSGHIH-TQNIRS 289

>3d03_A Phosphohydrolase; glycerophosphodiesterase, metallohydrolase, phosphatase, metal ION; 1.90A {Enterobacter aerogenes} SCOP: d.159.1.11 PDB: 2zoa_A 2zo9_B 2dxn_A 2dxl_A Length = 274

 Score = 52.1 bits (125), Expect = 4e-08
 Identities = 38/200 (19%), Positives = 63/200 (31%), Gaps = 30/200 (15%)

Query: 9   EIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQKQWYNVLGNHDYRGDVEAQLS 68
             D V+ +GD      +     P        I    SL    Y + GNHD +      L 
Sbjct: 41  RPDAVVVSGD------IVNCGRPEEYQVARQI--LGSLNYPLYLIPGNHDDKALFLEYLQ 92

Query: 69  PVLTRKDSRWLCSRSFILDAEIAEFVFVDTTPFVDEYFEDPGDSTYDWRGVYRRKEYLSD 128
           P+  +  S     R  + D      +F+D++          G S    +G    +     
Sbjct: 93  PLCPQLGSDANNMRCAVDDFATR-LLFIDSS--------RAGTS----KGWLTDET---- 135

Query: 129 LLKDVDGALKNSKAKWKIVVGHHTIKSAGHHGVTKELLL---RLLPILEEN-NVDMYVNG 184
            +  ++  L     K   +  HH     G+  +         RLL ++E   ++     G
Sbjct: 136 -ISWLEAQLFEGGDKPATIFMHHPPLPLGNAQMDPIACENGHRLLALVERFPSLTRIFCG 194

Query: 185 HDHCLQHISSNGIEFLTSGG 204
           H+H L           T  G
Sbjct: 195 HNHSLTMTQYRQALISTLPG 214

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	265
3tgh_A	342	Glideosome-associated protein 50; phosphatase fold	100.0
1ute_A	313	Protein (II purple acid phosphatase); tartrate res	100.0
1xzw_A	426	Purple acid phosphatase; hydrolase; HET: NAG FUC M	99.97
2qfp_A	424	Purple acid phosphatase; binuclear, Fe-Zn, hydrola	99.96
2yeq_A	527	Apased, PHOD, alkaline phosphatase D; hydrolase, p	99.93
3d03_A	274	Phosphohydrolase; glycerophosphodiesterase, metall	99.92
3ib7_A	330	ICC protein; metallophosphoesterase, alpha-beta fo	99.91
2nxf_A	322	Putative dimetal phosphatase; dinuclear metal cent	99.9
2xmo_A	443	LMO2642 protein; phosphodiesterase, hydrolase; 1.7	99.81
2q8u_A	336	Exonuclease, putative; structural genomics, joint	99.65
1uf3_A	228	Hypothetical protein TT1561; metallo-dependent pho	99.63
2yvt_A	260	Hypothetical protein AQ_1956; structural genomics,	99.59
3av0_A	386	DNA double-strand break repair protein MRE11; DNA	99.55
1z2w_A	192	Vacuolar protein sorting 29; VPS29, retromer, phos	99.54
3tho_B	379	Exonuclease, putative; adenosine triphosphate, bac	99.51
2a22_A	215	Vacuolar protein sorting 29; alpha-beta-BETA-alpha	99.49
3ck2_A	176	Conserved uncharacterized protein (predicted phosp	99.49
1nnw_A	252	Hypothetical protein; structural genomics, PSI, pr	99.46
1s3l_A	190	Hypothetical protein MJ0936; phosphodiesterase, nu	99.36
3rqz_A	246	Metallophosphoesterase; PSI-biology, midwest cente	99.35
3qfm_A	270	SAPH, putative uncharacterized protein; sandwich f	99.33
3rl5_A	296	Metallophosphoesterase mpped2; alpha-beta fold, me	99.32
1ii7_A	333	MRE11 nuclease; RAD50, DNA double-strand break rep	99.28
3t1i_A	431	Double-strand break repair protein MRE11A; DNA rep	99.28
4fbw_A	417	DNA repair protein RAD32; DNA double-strand break	99.28
4fbk_A	472	DNA repair and telomere maintenance protein NBS1,	99.27
2kkn_A	178	Uncharacterized protein; protein phosphatase 2A ho	99.19
1xm7_A	195	Hypothetical protein AQ_1665; structural genomics,	99.08
1su1_A	208	Hypothetical protein YFCE; structural genomics, ph	99.07
1hp1_A	516	5'-nucleotidase; metallophosphatase, dinuclear, me	98.57
1g5b_A	221	Serine/threonine protein phosphatase; bacteriophag	98.32
2wdc_A	562	SOXB, sulfur oxidation protein SOXB; sulfur-sulfur	98.13
2z1a_A	552	5'-nucleotidase; metal-binding, nucleotide-binding	98.07
3qfk_A	527	Uncharacterized protein; structural genomics, cent	97.97
3ive_A	509	Nucleotidase; structural genomics, PSI-2, protein	97.94
4h2g_A	546	5'-nucleotidase; dimer, hydrolase, phosphatase, ex	97.55
3c9f_A	557	5'-nucleotidase; 2',3'-cyclic phosphodiesterase, p	97.49
3ztv_A	579	NAD nucleotidase, NADN; hydrolase, NAD pyrophospha	97.46
1t71_A	281	Phosphatase, conserved HYPO; crystal, X-RAY crysta	97.23
4h1s_A	530	5'-nucleotidase; hydrolase; HET: NAG; 2.20A {Homo	96.91
2z06_A	252	Putative uncharacterized protein TTHA0625; metal b	96.3
1t70_A	255	Phosphatase; crystal, X-RAY crystallography, struc	96.24
2dfj_A	280	Diadenosinetetraphosphatase; helices and strands m	95.43
2qjc_A	262	Diadenosine tetraphosphatase, putative; putative d	94.95
2z72_A	342	Protein-tyrosine-phosphatase; cold-active enzyme,	93.77
3gve_A	341	YFKN protein; alpha-beta-BETA-alpha sandwich, stru	93.63
2ie4_C	309	PP2A-alpha;, serine/threonine-protein phosphatase	91.55
1fjm_A	330	Protein serine/threonine phosphatase-1 (alpha ISO	90.34
3e7a_A	299	PP-1A, serine/threonine-protein phosphatase PP1-al	89.44
1wao_1	477	Serine/threonine protein phosphatase 5; hydrolase,	89.01
3ll8_A	357	Serine/threonine-protein phosphatase 2B catalytic	88.41
3icf_A	335	PPT, serine/threonine-protein phosphatase T; IRO m	87.55
3h63_A	315	Serine/threonine-protein phosphatase 5; metalloenz	87.49
3jyf_A	339	2',3'-cyclic nucleotide 2'-phosphodiesterase/3'- n	87.07
1aui_A	521	Calcineurin, serine/threonine phosphatase 2B; hydr	85.27
3flo_A	460	DNA polymerase alpha subunit B; protein-protein co	80.09

>3tgh_A Glideosome-associated protein 50; phosphatase fold, NOT A phosphatase, motor protein, structur protein, membrane protein; 1.70A {Plasmodium falciparum 3D7}

Probab=100.00  E-value=3.9e-42  Score=289.92  Aligned_cols=248  Identities=24%  Similarity=0.467  Sum_probs=195.9

Q ss_pred             CcccccccCCCEEEecCCccCCCCCCCCCChhhhhhcccccCCC--CCCCceEEcCCCcccCCCccccccccc-------
Q 024595            1 MGLIGEKLEIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAP--SLQKQWYNVLGNHDYRGDVEAQLSPVL-------   71 (265)
Q Consensus         1 ~~~~~~~~~pd~vv~~GD~~~~~g~~~~~~~~~~~~~~~~~~~~--~l~~p~~~i~GNHD~~~~~~~~~~~~~-------   71 (265)
                      |.+++++.+|||||++||++|. |..+..+++|.+.|+.++...  .+++||++++||||+.++..++..+..       
T Consensus        26 m~~~~~~~~pd~vl~~GD~~y~-G~~~~~d~~~~~~f~~~~~~~~~~~~~P~~~vlGNHD~~~~~~aq~~~~~~~~~~~~  104 (342)
T 3tgh_A           26 FKQFIKNERVTFIVSPGSNFID-GVKGLNDPAWKNLYEDVYSEEKGDMYMPFFTVLGTRDWTGNYNAQLLKGQGIYIEKN  104 (342)
T ss_dssp             HHHHHHHTTCCEEEECSCSBTT-CCCSTTCTHHHHHTTTTSCCGGGTTCSEEEECCCHHHHTSCHHHHHHHHHC------
T ss_pred             HHHHHhhcCCCEEEECCCcccC-CCCcCccHHHHHHHHHHhhhhhhhhCCCEEEeCCCCccCCCchHhhhhhhccccccc
Confidence            3456777899999999999987 877667788999998887653  468999999999999988666655422       


Q ss_pred             ----------cccCCCceeeee-eEe----cC---------c----eEEEEEEeCccccccccCCCCCCCCCccccchhh
Q 024595           72 ----------TRKDSRWLCSRS-FIL----DA---------E----IAEFVFVDTTPFVDEYFEDPGDSTYDWRGVYRRK  123 (265)
Q Consensus        72 ----------~~~~~~~~~~~~-y~~----~~---------~----~~~~i~lds~~~~~~~~~~~~~~~~~~~~~~~~~  123 (265)
                                ...+++|.+|.. |.+    ..         +    .++||+|||......         ..+.+.  ..
T Consensus       105 ~~~~~~~~~~~~~~~rw~~P~~yY~~~~~f~~~~~~~~~~~g~~~~~v~fi~LDT~~l~~~---------~~~~~~--~~  173 (342)
T 3tgh_A          105 GETSIEKDADATNYPKWIMPNYWYHYFTHFTVSSGPSIVKTGHKDLAAAFIFIDTWVLSSN---------FPYKKI--HE  173 (342)
T ss_dssp             ---------CCCSSCEEECSSSSEEEEEEEEEC---------CEEEEEEEEECCTTTTSTT---------CSCHHH--HH
T ss_pred             ccccccccccccCCCCccCCcceEEEEEEeeccccccccccCCCCceEEEEEEeCcccccC---------Cccccc--ch
Confidence                      234678988743 332    11         2    499999999875321         122222  23


Q ss_pred             hhHHHHHHHHHHHhhcCCCCeEEEEeccccccCCCCCChHHHHHHHHHHHHhCCccEEEeCCcccceEEeeCCeEEEEeC
Q 024595          124 EYLSDLLKDVDGALKNSKAKWKIVVGHHTIKSAGHHGVTKELLLRLLPILEENNVDMYVNGHDHCLQHISSNGIEFLTSG  203 (265)
Q Consensus       124 ~~~~~Q~~wl~~~l~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~l~~~~~~~~v~~vl~GH~H~~~~~~~~~~~~i~~g  203 (265)
                      ...++|++||++.|+  +++|+||++|||+++.+.++....+++.|.+++++++|+++|+||.|.+++....++.|+++|
T Consensus       174 ~~~~~Ql~WLe~~L~--~~~~~IV~~HhP~~~~~~~~~~~~l~~~l~~ll~~~~VdlvlsGH~H~~~~~~~~g~~~iv~G  251 (342)
T 3tgh_A          174 KAWNDLKSQLSVAKK--IADFIIVVGDQPIYSSGYSRGSSYLAYYLLPLLKDAEVDLYISGHDNNMEVIEDNDMAHITCG  251 (342)
T ss_dssp             HHHHHHHHHHHHHHH--HCSEEEEECSSCSSCSSTTCCCHHHHHHTHHHHHHTTCCEEEECSSSSEEEEEETTEEEEEEC
T ss_pred             HHHHHHHHHHHHhhc--cCCcEEEEECCCCCCCCCCCCcHHHHHHHHHHHHHcCCCEEEECCCcceeEEeeCCcEEEEeC
Confidence            456899999999994  458999999999999887776667788999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCccceeeecCCCeEEEEEeCCeEEEEEEe-cCCCeEEEEEccCCCccC
Q 024595          204 GGSKAWRGDRNWWSPEELKLYYDGQGFMSVKMTRSEAVVLFYD-VHGNILHKWSIPKEPLKA  264 (265)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~~gy~~~~v~~~~i~~~~~~-~~g~~~~~~~i~~~~~~~  264 (265)
                      ++|..+.....  ......+....+||.+++++++++++++++ .+|+++++++|.|+..++
T Consensus       252 a~g~~~~~~~~--~~~~s~f~~~~~Gf~~l~v~~~~l~~~~~~~~~G~vld~~~i~k~~~~~  311 (342)
T 3tgh_A          252 SGSMSQGKSGM--KNSKSLFFSSDIGFCVHELSNNGIVTKFVSSKKGEVIYTHKLNIKKKKT  311 (342)
T ss_dssp             CSSCCCCCCSS--CCTTEEEEECSSEEEEEEEETTEEEEEEEETTTTEEEEEEEEECCCCSS
T ss_pred             ccccccccCCC--CCCcceeecCCCcEEEEEEECCEEEEEEEECCCCcEEEEEEEECCCCcc
Confidence            99887653221  123445667899999999999999999999 999999999999986543

>1ute_A Protein (II purple acid phosphatase); tartrate resistant acid phosphatase metalloenzyme, uteroferrin, hydrolase; HET: NAG; 1.55A {Sus scrofa} SCOP: d.159.1.1 PDB: 1war_A* 2bq8_X 1qfc_A* 1qhw_A*

Probab=100.00  E-value=4.7e-35  Score=245.52  Aligned_cols=253  Identities=28%  Similarity=0.457  Sum_probs=179.0

Q ss_pred             ccccCCCEEEecCCccCCCCCCCCCChhhhhhcccccCCCCC-CCceEEcCCCcccCCCccccccccccccCCCceee-e
Q 024595            5 GEKLEIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSL-QKQWYNVLGNHDYRGDVEAQLSPVLTRKDSRWLCS-R   82 (265)
Q Consensus         5 ~~~~~pd~vv~~GD~~~~~g~~~~~~~~~~~~~~~~~~~~~l-~~p~~~i~GNHD~~~~~~~~~~~~~~~~~~~~~~~-~   82 (265)
                      +++.+|||||++||++|..|.....+.++.+.++.++....+ ++|+++++||||+..+......+  .....+|..+ .
T Consensus        39 ~~~~~~d~vv~~GD~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~p~~~v~GNHD~~~~~~~~~~~--~~~~~~~~~~~~  116 (313)
T 1ute_A           39 VKTLGADFILSLGDNFYFTGVHDAKDKRFQETFEDVFSDPSLRNVPWHVLAGNHDHLGNVSAQIAY--SKISKRWNFPSP  116 (313)
T ss_dssp             HHHHCCSEEEECSCCSTTTCCSSTTCTHHHHHTTTTSCSGGGTTCCEEECCCHHHHHSCHHHHHHG--GGTSTTEECCSS
T ss_pred             HHhcCCCEEEECCCccCcCCCCCcchHHHHHHHHHHcCchhhcCCCEEEECCCCccCCCccccccc--cccCCCccCccc
Confidence            455799999999999988776654555676766665543346 79999999999997654433221  1122345433 2


Q ss_pred             eeEecC------ceEEEEEEeCccccccccCCCCCCCCCccccchhhhhHHHHHHHHHHHhhcCCCCeEEEEeccccccC
Q 024595           83 SFILDA------EIAEFVFVDTTPFVDEYFEDPGDSTYDWRGVYRRKEYLSDLLKDVDGALKNSKAKWKIVVGHHTIKSA  156 (265)
Q Consensus        83 ~y~~~~------~~~~~i~lds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~~wl~~~l~~~~~~~~iv~~H~P~~~~  156 (265)
                      +|.+..      ++++||+||+..+.............    ......+.++|++||++.|++++++++|+++|+|++..
T Consensus       117 ~y~~~~~~~~~~~~~~~i~lds~~~~~~~~~~~~~~~~----~~~~~~~~~~q~~wL~~~L~~~~~~~~iv~~H~p~~~~  192 (313)
T 1ute_A          117 YYRLRFKIPRSNVSVAIFMLDTVTLCGNSDDFVSQQPE----RPRNLALARTQLAWIKKQLAAAKEDYVLVAGHYPVWSI  192 (313)
T ss_dssp             SEEEEEECTTSSCEEEEEECCHHHHHCCGGGSTTCSCC----SCSCHHHHHHHHHHHHHHHHHCCCSEEEEECSSCSSCC
T ss_pred             ceEEEEecCCCCceEEEEEEEChHHhCcCccccccccC----CccccchHHHHHHHHHHHHHhCCCCeEEEEECCCCccC
Confidence            333333      48999999998764321100000000    01134567899999999999988899999999999887


Q ss_pred             CCCCChHHHHHHHHHHHHhCCccEEEeCCcccceEEe-eCCeEEEEeCCCCCCCCCCCC--CCCCccceeeec----CCC
Q 024595          157 GHHGVTKELLLRLLPILEENNVDMYVNGHDHCLQHIS-SNGIEFLTSGGGSKAWRGDRN--WWSPEELKLYYD----GQG  229 (265)
Q Consensus       157 ~~~~~~~~~~~~l~~~~~~~~v~~vl~GH~H~~~~~~-~~~~~~i~~g~~~~~~~~~~~--~~~~~~~~~~~~----~~g  229 (265)
                      ..++......+.+.+++++++|+++|+||+|...... .+++.++++|+++...+....  ........|...    ..|
T Consensus       193 ~~~~~~~~~~~~l~~~l~~~~v~~~l~GH~H~~~~~~~~~g~~~i~~gs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  272 (313)
T 1ute_A          193 AEHGPTHCLVKQLLPLLTTHKVTAYLCGHDHNLQYLQDENGLGFVLSGAGNFMDPSKKHLRKVPNGYLRFHFGAENSLGG  272 (313)
T ss_dssp             SSSCCCHHHHHHTHHHHHHTTCSEEEECSSSSEEEEECTTCCEEEEECBSSCCCCCCTTGGGSCTTCEEEEECCTTSCCE
T ss_pred             CCCCCcHHHHHHHHHHHHHcCCcEEEECChhhhhhccCCCCceEEEECCCcCcCccccccccCCCcccceeccCcCCCCc
Confidence            6655555667889999999999999999999988776 589999999998865432110  111122334332    379


Q ss_pred             eEEEEEeCCeEEEEEEecCCCeEEEEEccCCCcc
Q 024595          230 FMSVKMTRSEAVVLFYDVHGNILHKWSIPKEPLK  263 (265)
Q Consensus       230 y~~~~v~~~~i~~~~~~~~g~~~~~~~i~~~~~~  263 (265)
                      |.+++++++++++++++.+|+++++++|+|+..+
T Consensus       273 y~~l~v~~~~~~~~~~~~~g~~~~~~~l~~~~~~  306 (313)
T 1ute_A          273 FAYVEITPKEMSVTYIEASGKSLFKTKLPRRARS  306 (313)
T ss_dssp             EEEEEECSSCEEEEEEETTSCEEEEEEECCCC--
T ss_pred             eEEEEEEcCEEEEEEEcCCCcEEEEEEeccccCc
Confidence            9999999999999999999999999999998543

>1xzw_A Purple acid phosphatase; hydrolase; HET: NAG FUC MAN; 2.50A {Ipomoea batatas} SCOP: b.1.12.1 d.159.1.1

Probab=99.97  E-value=1.4e-30  Score=227.58  Aligned_cols=232  Identities=13%  Similarity=0.129  Sum_probs=156.6

Q ss_pred             cCCCEEEecCCccCCCCCCCCCChhhhhhcccccCCCCCCCceEEcCCCcccCCCccccccccccccCCCcee-------
Q 024595            8 LEIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQKQWYNVLGNHDYRGDVEAQLSPVLTRKDSRWLC-------   80 (265)
Q Consensus         8 ~~pd~vv~~GD~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~p~~~i~GNHD~~~~~~~~~~~~~~~~~~~~~~-------   80 (265)
                      .+|||||++||++|.++.....+.+|.. |...+......+|+++++||||+..+........+.....+|.+       
T Consensus       153 ~~~D~vl~~GD~~y~~~~~~~~~~~~~~-~~~~l~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~p~~~~~~  231 (426)
T 1xzw_A          153 AKGQAVLFMGDLSYSNRWPNHDNNRWDT-WGRFSERSVAYQPWIWTAGNHEIDYAPDIGEYQPFVPFTNRYPTPHEASGS  231 (426)
T ss_dssp             TCCSEEEECSCCCCGGGSGGGCTHHHHH-HHHHHHHHHTTSCEECCCCGGGCCCBGGGTBCSTTHHHHHHSCCCCGGGTC
T ss_pred             CCCCEEEeCCChhhcccCCcccchHHHH-HHHHHHHHHhcCCEEEeccccccccCCccccccCChhheEEEeCCcccCCC
Confidence            3899999999999876643222233332 22222111236899999999998753210000000000011111       


Q ss_pred             --eeeeEecCceEEEEEEeCccccccccCCCCCCCCCccccchhhhhHHHHHHHHHHHhhc---CCCCeEEEEecccccc
Q 024595           81 --SRSFILDAEIAEFVFVDTTPFVDEYFEDPGDSTYDWRGVYRRKEYLSDLLKDVDGALKN---SKAKWKIVVGHHTIKS  155 (265)
Q Consensus        81 --~~~y~~~~~~~~~i~lds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~~wl~~~l~~---~~~~~~iv~~H~P~~~  155 (265)
                        +.+|+++.++++||+||+.....                     ...+|++||++.|++   ++.+|+||++|+|++.
T Consensus       232 ~~~~~ys~~~g~~~~i~Ldt~~~~~---------------------~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~  290 (426)
T 1xzw_A          232 GDPLWYAIKRASAHIIVLSSYSGFV---------------------KYSPQYKWFTSELEKVNRSETPWLIVLVHAPLYN  290 (426)
T ss_dssp             SSTTSEEEEETTEEEEECCTTSCCS---------------------TTSHHHHHHHHHHHHCCTTTCCEEEEECSSCSSC
T ss_pred             CCCCeEEEEECCEEEEEeeCcccCC---------------------CCHHHHHHHHHHHHhhhhcCCCEEEEEeccCcee
Confidence              23577888889999999864210                     124899999999998   3567999999999987


Q ss_pred             CCC--CCChHHHHHHHHHHHHhCCccEEEeCCcccceEEe-------------------eCCeEEEEeCCCCCCCCC--C
Q 024595          156 AGH--HGVTKELLLRLLPILEENNVDMYVNGHDHCLQHIS-------------------SNGIEFLTSGGGSKAWRG--D  212 (265)
Q Consensus       156 ~~~--~~~~~~~~~~l~~~~~~~~v~~vl~GH~H~~~~~~-------------------~~~~~~i~~g~~~~~~~~--~  212 (265)
                      ...  .+....+++.|.+++.+++|++||+||+|.+++..                   ..++.||++|+||.....  .
T Consensus       291 ~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~~~r~~p~~~~~~~~~~g~~~~~~~~~g~~yi~~G~gG~~~~~~~~  370 (426)
T 1xzw_A          291 SYEAHYMEGEAMRAIFEPYFVYYKVDIVFSGHVHSYERSERVSNVAYNIVNAKCTPVSDESAPVYITIGDGGNSEGLASE  370 (426)
T ss_dssp             CBSTTTTTTHHHHHHHHHHHHHTTCSEEEECSSSSEEEECSEECCCCCSTTCCCCCEECTTSCEEEEECCSCCTTCCCCC
T ss_pred             CCCcccCCCHHHHHHHHHHHHHhCCCEEEEcChhhheeeeeecCccccccCCccccccCCCccEEEEeCCCccccccccc
Confidence            542  23334567889999999999999999999998764                   257889999998865422  1


Q ss_pred             CCCCCCccceeeecCCCeEEEEEeCC-eEEEEEE-ecCCC--eEEEEEccCCC
Q 024595          213 RNWWSPEELKLYYDGQGFMSVKMTRS-EAVVLFY-DVHGN--ILHKWSIPKEP  261 (265)
Q Consensus       213 ~~~~~~~~~~~~~~~~gy~~~~v~~~-~i~~~~~-~~~g~--~~~~~~i~~~~  261 (265)
                      .....+....+....+||.++++.++ .+.++++ +.+|+  ++++++|.|+-
T Consensus       371 ~~~~~p~~s~~~~~~~G~~~l~v~n~t~~~~~~~~~~dg~~~~~D~~~i~~~~  423 (426)
T 1xzw_A          371 MTQPQPSYSAFREASFGHGIFDIKNRTHAHFSWHRNQDGASVEADSLWLLNRY  423 (426)
T ss_dssp             BCSSCCTTEEEEECCCEEEEEEECSSSEEEEEEEETTSCTTCCSEEEEEECSC
T ss_pred             cCCCCCCceeEEecCCCeEEEEEEcCCeEEEEEEECCCCCEEEeEEEEEEecc
Confidence            11112233455567899999999654 7999998 47888  79999999873

>2qfp_A Purple acid phosphatase; binuclear, Fe-Zn, hydrolase; HET: NAG NDG; 2.20A {Phaseolus vulgaris} SCOP: b.1.12.1 d.159.1.1 PDB: 2qfr_A* 1kbp_A* 3kbp_A* 4kbp_A*

Probab=99.96  E-value=6.8e-29  Score=216.80  Aligned_cols=230  Identities=14%  Similarity=0.159  Sum_probs=152.9

Q ss_pred             CCCEEEecCCccCCCCCCCCCChhhhhhcccccCCCCCCCceEEcCCCcccCCCcc-ccccccccccCCCce--------
Q 024595            9 EIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQKQWYNVLGNHDYRGDVE-AQLSPVLTRKDSRWL--------   79 (265)
Q Consensus         9 ~pd~vv~~GD~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~p~~~i~GNHD~~~~~~-~~~~~~~~~~~~~~~--------   79 (265)
                      +|||||++||++|..+....++.+|.. |...+......+|+++++||||+..... ..... +.....+|.        
T Consensus       147 ~~D~vl~~GDl~y~~~~~~~~~~~~~~-~~~~l~~~~~~~P~~~v~GNHD~~~~~~~~~~~~-~~~~~~~f~~P~~~~~~  224 (424)
T 2qfp_A          147 KGQTVLFVGDLSYADRYPNHDNVRWDT-WGRFTERSVAYQPWIWTAGNHEIEFAPEINETEP-FKPFSYRYHVPYEASQS  224 (424)
T ss_dssp             CCCEEEECSCCSCGGGSGGGCTHHHHH-HHHHHHHHHTTSCEEECCCHHHHCCBGGGTBCST-THHHHHHCCCCGGGGTC
T ss_pred             CCCEEEEcCccccccccccccchHHHH-HHHHHHHHHhcCCeEeecCCcccccCCccccccc-chhhhhhccCCccccCC
Confidence            899999999999876543222233322 2222211112589999999999864211 00000 000000111        


Q ss_pred             -eeeeeEecCceEEEEEEeCccccccccCCCCCCCCCccccchhhhhHHHHHHHHHHHhhcC---CCCeEEEEecccccc
Q 024595           80 -CSRSFILDAEIAEFVFVDTTPFVDEYFEDPGDSTYDWRGVYRRKEYLSDLLKDVDGALKNS---KAKWKIVVGHHTIKS  155 (265)
Q Consensus        80 -~~~~y~~~~~~~~~i~lds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~~wl~~~l~~~---~~~~~iv~~H~P~~~  155 (265)
                       .+.+|+++.++++||+||+....               +      ...+|++||++.|++.   +.+|+||++|+|++.
T Consensus       225 ~~~~~ys~~~g~~~~i~Ldt~~~~---------------~------~~~~Q~~WL~~~L~~~~~~~~~~~Iv~~H~P~~~  283 (424)
T 2qfp_A          225 TSPFWYSIKRASAHIIVLSSYSAY---------------G------RGTPQYTWLKKELRKVKRSETPWLIVLMHSPLYN  283 (424)
T ss_dssp             SSTTSEEEEETTEEEEECCTTSCC---------------S------TTSHHHHHHHHHHHHCCTTTCCEEEEECSSCSSC
T ss_pred             CCCcEEEEEECCEEEEEecCCccC---------------C------CcHHHHHHHHHHHhhhcccCCCEEEEEeCcCcee
Confidence             12356788789999999996410               0      1137999999999984   356999999999987


Q ss_pred             CCC-C-CChHHHHHHHHHHHHhCCccEEEeCCcccceEEee-------------------CCeEEEEeCCCCCCCCCC--
Q 024595          156 AGH-H-GVTKELLLRLLPILEENNVDMYVNGHDHCLQHISS-------------------NGIEFLTSGGGSKAWRGD--  212 (265)
Q Consensus       156 ~~~-~-~~~~~~~~~l~~~~~~~~v~~vl~GH~H~~~~~~~-------------------~~~~~i~~g~~~~~~~~~--  212 (265)
                      ... + .....+++.|.+++.+++|+++|+||+|.+++...                   .++.||++|+||......  
T Consensus       284 ~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~y~r~~~~~~~~~~~~~g~~~~~~~~~~~vyi~~G~gg~~~~~~~~  363 (424)
T 2qfp_A          284 SYNHHFMEGEAMRTKFEAWFVKYKVDVVFAGHVHAYERSERVSNIAYKITNGLCTPVKDQSAPVYITIGDAGNYGVIDSN  363 (424)
T ss_dssp             CBSTTTTTTHHHHHHHHHHHHHTTCSEEEECSSSSEEEECSEECCCCCSSSCCCSCEECTTSCEEEEECCSCTTSCCCCC
T ss_pred             cCcccccccHHHHHHHHHHHHHhCCcEEEECChhhhheeccccCcceeccCCccccccCCCCcEEEEecCCCCccccCcc
Confidence            532 1 22345678899999999999999999999877632                   357899999988764321  


Q ss_pred             CCCCCCccceeeecCCCeEEEEEeC-CeEEEEEEe-cCCCeE--EEEEccCCC
Q 024595          213 RNWWSPEELKLYYDGQGFMSVKMTR-SEAVVLFYD-VHGNIL--HKWSIPKEP  261 (265)
Q Consensus       213 ~~~~~~~~~~~~~~~~gy~~~~v~~-~~i~~~~~~-~~g~~~--~~~~i~~~~  261 (265)
                      .....+....+....+||.++++.+ ..+.++++. .+|+++  ++++|.|+.
T Consensus       364 ~~~~~p~~s~~~~~~~G~~~l~v~n~t~~~~~~~~~~~g~~~~~D~~~i~~~~  416 (424)
T 2qfp_A          364 MIQPQPEYSAFREASFGHGMFDIKNRTHAHFSWNRNQDGVAVEADSVWFFNRH  416 (424)
T ss_dssp             BCSSCCTTEEEEECCCEEEEEEECSSSEEEEEEEETTSCTTCCSEEEEEECTT
T ss_pred             CCCCCCCcceEEecCCCEEEEEEEcCcEEEEEEEECCCCCEEeeeEEEEEecc
Confidence            1111123344555789999999954 479999985 789975  999999884

>2yeq_A Apased, PHOD, alkaline phosphatase D; hydrolase, phosphodiesterase; HET: PE5; 1.93A {Bacillus subtilis}

Probab=99.93  E-value=1e-24  Score=194.16  Aligned_cols=239  Identities=14%  Similarity=0.149  Sum_probs=147.8

Q ss_pred             ccCCCEEEecCCccCCCCCCCC----------------CChhhhhhcccccCCCCC-----CCceEEcCCCcccCCCccc
Q 024595            7 KLEIDFVISTGDNFYEDGLTGE----------------EDPAFLDSFTSIYTAPSL-----QKQWYNVLGNHDYRGDVEA   65 (265)
Q Consensus         7 ~~~pd~vv~~GD~~~~~g~~~~----------------~~~~~~~~~~~~~~~~~l-----~~p~~~i~GNHD~~~~~~~   65 (265)
                      +.+|||||++||++|+++....                ...+++..|...+..+.+     .+||++++||||+.++...
T Consensus       140 ~~~~D~vlhlGD~iY~d~~~~~~~~~~~~R~~~~~e~~tl~~yr~~y~~~~~dp~lq~~~a~~P~i~~wDDHE~~nn~~~  219 (527)
T 2yeq_A          140 KEKLDLVFHLGDYIYEYGPNEYVSKTGNVRTHNSAEIITLQDYRNRHAQYRSDANLKAAHAAFPWVVTWDDHEVENNYAN  219 (527)
T ss_dssp             TSCCSEEEECSCSSCCCCTTSSCCTTCCCSCCSSSSCCSHHHHHHHHHHHHTCHHHHHHHHHSEEEECCCSTTTSTTCBT
T ss_pred             hcCCCEEEecCCcccCCCCCcccccccccccCCcccccCHHHHHHHHHHHhCCHHHHHHHhcCCEEEecccccccCCCCC
Confidence            3699999999999998864321                012333444333322222     4899999999999866322


Q ss_pred             ccc------------------ccccccC------CC-ceeeeeeEecCce-EEEEEEeCccccccccCCCCCCCCCccc-
Q 024595           66 QLS------------------PVLTRKD------SR-WLCSRSFILDAEI-AEFVFVDTTPFVDEYFEDPGDSTYDWRG-  118 (265)
Q Consensus        66 ~~~------------------~~~~~~~------~~-~~~~~~y~~~~~~-~~~i~lds~~~~~~~~~~~~~~~~~~~~-  118 (265)
                      ...                  .++..+.      +. -....+|+|.+++ ++||+|||+.+........ .....+.. 
T Consensus       220 ~~~~~~~~~~~f~~rr~~A~~ay~e~~P~~~~~~p~~~~~~~y~sf~~G~lv~~i~LDtR~yr~~~~~~~-~~~~~~~~~  298 (527)
T 2yeq_A          220 KIPEKGQSVEAFVLRRAAAYQAYYEHMPLRISSLPNGPDMQLYRHFTYGNLASFNVLDTRQYRDDQANND-GNKPPSDES  298 (527)
T ss_dssp             TBCSTTCCHHHHHHHHHHHHHHHHHHSCCCGGGCCBTTBCCCCEEEEETTTEEEEECCSSSSCCCCGGGS-SEECCCHHH
T ss_pred             CcccccCCcccHHHHHHHHHHHHHHhCCCCcccCCCCCCceEEEEEEcCCcceEEEEecccccccccccc-ccccccccc
Confidence            100                  0000000      00 0011346788788 9999999998653210000 00000000 


Q ss_pred             -cchhhhhHHHHHHHHHHHhhcCCCCeEEEEeccccccCCCC-C-----------ChHHHHHHHHHHHHhCCc--cEEEe
Q 024595          119 -VYRRKEYLSDLLKDVDGALKNSKAKWKIVVGHHTIKSAGHH-G-----------VTKELLLRLLPILEENNV--DMYVN  183 (265)
Q Consensus       119 -~~~~~~~~~~Q~~wl~~~l~~~~~~~~iv~~H~P~~~~~~~-~-----------~~~~~~~~l~~~~~~~~v--~~vl~  183 (265)
                       ...+..++++|++||++.|++++++|+||++|+|++....+ +           .....+++|+++|.+++|  .+||+
T Consensus       299 ~~~~~~~lG~~Q~~WL~~~L~~s~a~W~Iv~s~~p~~~~~~~~g~~~~~~~D~W~g~~~~R~~Ll~~l~~~~v~n~vvLs  378 (527)
T 2yeq_A          299 RNPNRTLLGKEQEQWLFNNLGSSTAHWNVLAQQIFFAKWNFGTSASPIYSMDSWDGYPAQRERVINFIKSKNLNNVVVLT  378 (527)
T ss_dssp             HCTTCCSSCHHHHHHHHHHHHHCCSSEEEEECSSCCSCCCSSCSSSCCEETTSGGGSHHHHHHHHHHHHHTTCCCEEEEE
T ss_pred             cCCcccccCHHHHHHHHHHHhcCCCCeEEEEeCCcccccccCCCcccccCccchhccHHHHHHHHHHHHHhCCCCEEEEE
Confidence             01123467899999999999999999999999999865321 1           113457899999999988  49999


Q ss_pred             CCcccceEEee-------C----CeEEEEeCCCCCCCCCCCCC----C--CCccceeeecCCCeEEEEEeCCeEEEEEEe
Q 024595          184 GHDHCLQHISS-------N----GIEFLTSGGGSKAWRGDRNW----W--SPEELKLYYDGQGFMSVKMTRSEAVVLFYD  246 (265)
Q Consensus       184 GH~H~~~~~~~-------~----~~~~i~~g~~~~~~~~~~~~----~--~~~~~~~~~~~~gy~~~~v~~~~i~~~~~~  246 (265)
                      ||.|.+.....       .    ++.|++++..+.........    +  ..+..+|.....||++|+|++++++++++.
T Consensus       379 GDvH~~~~~~~~~~~~~p~~~~~~~ef~~ssi~s~~~g~~~~~~~~~~~~~np~~~~~~~~~Gy~~v~vt~~~~~~~~~~  458 (527)
T 2yeq_A          379 GDVHASWASNLHVDFEKTSSKIFGAEFVGTSITSGGNGADKRADTDQILKENPHIQFFNDYRGYVRCTVTPHQWKADYRV  458 (527)
T ss_dssp             CSSSSEEEEEEESSTTCTTSCEEEEEEECCCSSTTCSCBSBCTTHHHHHHHCTTEEEEEBCEEEEEEEEETTEEEEEEEE
T ss_pred             cchHHHhHhhccccccCCCCCceEEEEEcCCeeCCCCcccchhhhhhhhhcCCcceeeeCCCCEEEEEEeccEEEEEEEE
Confidence            99999987643       1    35566554433322111000    0  112346666789999999999999999986

>3d03_A Phosphohydrolase; glycerophosphodiesterase, metallohydrolase, phosphatase, metal ION; 1.90A {Enterobacter aerogenes} SCOP: d.159.1.11 PDB: 2zoa_A 2zo9_B 2dxn_A 2dxl_A

Probab=99.92  E-value=2.9e-24  Score=176.63  Aligned_cols=210  Identities=17%  Similarity=0.138  Sum_probs=137.1

Q ss_pred             CCCEEEecCCccCCCCCCCCCChhhhhhcccccCCCCCCCceEEcCCCcccCCCccccccccccccCCCceeeeeeEecC
Q 024595            9 EIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQKQWYNVLGNHDYRGDVEAQLSPVLTRKDSRWLCSRSFILDA   88 (265)
Q Consensus         9 ~pd~vv~~GD~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~p~~~i~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~   88 (265)
                      +||+||++||+++ .+.    ..++. .+..++  ..+++|+++++||||........+...+....... .+..|.+..
T Consensus        41 ~~d~vi~~GDl~~-~~~----~~~~~-~~~~~l--~~l~~p~~~v~GNHD~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~  111 (274)
T 3d03_A           41 RPDAVVVSGDIVN-CGR----PEEYQ-VARQIL--GSLNYPLYLIPGNHDDKALFLEYLQPLCPQLGSDA-NNMRCAVDD  111 (274)
T ss_dssp             CCSEEEEESCCBS-SCC----HHHHH-HHHHHH--TTCSSCEEEECCTTSCHHHHHHHHGGGSGGGCSCG-GGCCEEECS
T ss_pred             CCCEEEECCCCCC-CCC----HHHHH-HHHHHH--HhcCCCEEEECCCCCCHHHHHHHhhhhhcCcccCC-CceEEEEEe
Confidence            6899999999994 331    12222 222222  23578999999999985432211111000000000 113467788


Q ss_pred             ceEEEEEEeCccccccccCCCCCCCCCccccchhhhhHHHHHHHHHHHhhcCCCCeEEEEeccccccCCCCCCh---HHH
Q 024595           89 EIAEFVFVDTTPFVDEYFEDPGDSTYDWRGVYRRKEYLSDLLKDVDGALKNSKAKWKIVVGHHTIKSAGHHGVT---KEL  165 (265)
Q Consensus        89 ~~~~~i~lds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~~wl~~~l~~~~~~~~iv~~H~P~~~~~~~~~~---~~~  165 (265)
                      ++++|++||+......                 ...+.++|++||++.|++.+.+++|+++|+|++........   ...
T Consensus       112 ~~~~~i~ld~~~~~~~-----------------~~~~~~~~~~wl~~~l~~~~~~~~iv~~H~p~~~~~~~~~~~~~~~~  174 (274)
T 3d03_A          112 FATRLLFIDSSRAGTS-----------------KGWLTDETISWLEAQLFEGGDKPATIFMHHPPLPLGNAQMDPIACEN  174 (274)
T ss_dssp             SSSEEEECCCCCTTCS-----------------SBCCCHHHHHHHHHHHHHHTTSCEEEEESSCSSCCSCTTTGGGSBTT
T ss_pred             CCEEEEEEeCCCCCCC-----------------CCeeCHHHHHHHHHHHHhCCCCCEEEEECCCCcccCCcccCcccCcC
Confidence            8999999999764210                 11245689999999999876788999999999865422111   012


Q ss_pred             HHHHHHHHHhC-CccEEEeCCcccceEEeeCCeEEEEeCCCCCCCCCCCCCCCCccceeeecCCCeEEEEEeCCeEEEEE
Q 024595          166 LLRLLPILEEN-NVDMYVNGHDHCLQHISSNGIEFLTSGGGSKAWRGDRNWWSPEELKLYYDGQGFMSVKMTRSEAVVLF  244 (265)
Q Consensus       166 ~~~l~~~~~~~-~v~~vl~GH~H~~~~~~~~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~gy~~~~v~~~~i~~~~  244 (265)
                      .+.+.++++++ +++++|+||+|........++.++++++.+.......   ......+.....||.+++++++++++++
T Consensus       175 ~~~l~~~l~~~~~v~~vl~GH~H~~~~~~~~g~~~~~~pg~~~~~~~~~---~~~~~~~~~~~~gy~i~~i~~~~~~~~~  251 (274)
T 3d03_A          175 GHRLLALVERFPSLTRIFCGHNHSLTMTQYRQALISTLPGTVHQVPYCH---ADTDPYYDLSPASCLMHRQVGEQWVSYQ  251 (274)
T ss_dssp             THHHHHHHHHCTTEEEEEECSSSSCEEEEETTEEEEECCCSSCBCCCCS---SCCSCEEBCCCCEEEEEEEETTEEEEEE
T ss_pred             HHHHHHHHHhCCCceEEEeCCCCCchhheECCEEEEEcCCcceeeccCC---CccccccccCCCceEEEEEeCCcEEEEE
Confidence            35678899988 8999999999999887778888877776655432111   0111123345789999999999999998


Q ss_pred             Eec
Q 024595          245 YDV  247 (265)
Q Consensus       245 ~~~  247 (265)
                      +..
T Consensus       252 ~~~  254 (274)
T 3d03_A          252 HSL  254 (274)
T ss_dssp             EEC
T ss_pred             Eec
Confidence            875

>3ib7_A ICC protein; metallophosphoesterase, alpha-beta fold, swapped-dimer, HYDR; HET: BTB; 1.60A {Mycobacterium tuberculosis} PDB: 3ib8_A* 2hy1_A 2hyp_A 2hyo_A

Probab=99.91  E-value=8.1e-25  Score=184.75  Aligned_cols=211  Identities=16%  Similarity=0.086  Sum_probs=139.4

Q ss_pred             cCCCEEEecCCccCCCCCCCCCChhhhhhcccccCCCCCCCceEEcCCCcccCCCccccccccccccCCCceeeeeeEec
Q 024595            8 LEIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQKQWYNVLGNHDYRGDVEAQLSPVLTRKDSRWLCSRSFILD   87 (265)
Q Consensus         8 ~~pd~vv~~GD~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~p~~~i~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~y~~~   87 (265)
                      .+||+||++||+++ .|... .-..+.+.++.+.  ..+++|+++++||||+.......+.    .. .....+.+|.+.
T Consensus        65 ~~~d~vi~~GDl~~-~~~~~-~~~~~~~~l~~l~--~~~~~pv~~v~GNHD~~~~~~~~~~----~~-~~~~~~~~~~~~  135 (330)
T 3ib7_A           65 LRPDAIVFTGDLAD-KGEPA-AYRKLRGLVEPFA--AQLGAELVWVMGNHDDRAELRKFLL----DE-APSMAPLDRVCM  135 (330)
T ss_dssp             CCCSEEEECSCCBT-TCCHH-HHHHHHHHHHHHH--HHHTCEEEECCCTTSCHHHHHHHHH----CC-CCCCSCCCEEEE
T ss_pred             CCCCEEEECCCCCC-CCCHH-HHHHHHHHHHHHH--hhcCCCEEEeCCCCCCHHHHHHHhc----cc-ccccCCcceEEE
Confidence            68999999999994 33110 0011222222211  1247899999999997542221111    00 001122446677


Q ss_pred             CceEEEEEEeCccccccccCCCCCCCCCccccchhhhhHHHHHHHHHHHhhcCCCCeEEEEeccccccCCCCCC---hHH
Q 024595           88 AEIAEFVFVDTTPFVDEYFEDPGDSTYDWRGVYRRKEYLSDLLKDVDGALKNSKAKWKIVVGHHTIKSAGHHGV---TKE  164 (265)
Q Consensus        88 ~~~~~~i~lds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~~wl~~~l~~~~~~~~iv~~H~P~~~~~~~~~---~~~  164 (265)
                      .++++|++||+.....         .        ...+.++|++||++.|+....+.+|+++|||++.......   ...
T Consensus       136 ~~~~~~i~lds~~~~~---------~--------~~~~~~~q~~wl~~~l~~~~~~~~iv~~Hh~p~~~~~~~~~~~~~~  198 (330)
T 3ib7_A          136 IDGLRIIVLDTSVPGH---------H--------HGEIRASQLGWLAEELATPAPDGTILALHHPPIPSVLDMAVTVELR  198 (330)
T ss_dssp             ETTEEEEECCCCCTTC---------C--------SBCCCHHHHHHHHHHTTSCCTTCEEEECSSCSSCCSSGGGGGGSBS
T ss_pred             eCCEEEEEecCCCCCC---------C--------CCccCHHHHHHHHHHHHhcccCCeEEEEECCCCCCCcccccccccc
Confidence            7899999999986311         0        1123568999999999997777789999999876532111   011


Q ss_pred             HHHHHHHHHHhCCccEEEeCCcccceEEeeCCeEEEEeCCCCCCCCCCCCCCCCccceeeecCCCeEEEEEeCCeEEEEE
Q 024595          165 LLLRLLPILEENNVDMYVNGHDHCLQHISSNGIEFLTSGGGSKAWRGDRNWWSPEELKLYYDGQGFMSVKMTRSEAVVLF  244 (265)
Q Consensus       165 ~~~~l~~~~~~~~v~~vl~GH~H~~~~~~~~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~gy~~~~v~~~~i~~~~  244 (265)
                      ..+.+..++++++++++++||+|.......+++.++++|+.+.......   ............||.+++++++.+++++
T Consensus       199 ~~~~l~~~l~~~~v~~v~~GH~H~~~~~~~~g~~~~~~gs~~~~~~~~~---~~g~~~~~~~~~gy~iv~i~~~~~~~~~  275 (330)
T 3ib7_A          199 DQAALGRVLRGTDVRAILAGHLHYSTNATFVGIPVSVASATCYTQDLTV---AAGGTRGRDGAQGCNLVHVYPDTVVHSV  275 (330)
T ss_dssp             CHHHHHHHHTTSSEEEEEECSSSSCEEEEETTEEEEECCCSSCEECTTS---CTTCCCEESCSCEEEEEEECSSCEEEEE
T ss_pred             CHHHHHHHHhccCceEEEECCCCCcccceECCEEEEecCcceeccCCCC---CCcceeccCCCCceEEEEEECCCeEEEE
Confidence            2467888999999999999999999988889999999988876542211   0111122234678999999999999999


Q ss_pred             Eec
Q 024595          245 YDV  247 (265)
Q Consensus       245 ~~~  247 (265)
                      +..
T Consensus       276 v~~  278 (330)
T 3ib7_A          276 IPL  278 (330)
T ss_dssp             EEC
T ss_pred             ecc
Confidence            874

>2nxf_A Putative dimetal phosphatase; dinuclear metal center phosphatase, metalloprotein, metallophosphoesterase, protein structure initiative; 1.70A {Danio rerio} SCOP: d.159.1.12

Probab=99.90  E-value=4.5e-24  Score=179.18  Aligned_cols=223  Identities=15%  Similarity=0.140  Sum_probs=132.9

Q ss_pred             ccCCCEEEecCCccCCCCCCCCCChhhhhhcccccCCCCCCCceEEcCCCcccCCCcccccccccccc-------CCC-c
Q 024595            7 KLEIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQKQWYNVLGNHDYRGDVEAQLSPVLTRK-------DSR-W   78 (265)
Q Consensus         7 ~~~pd~vv~~GD~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~p~~~i~GNHD~~~~~~~~~~~~~~~~-------~~~-~   78 (265)
                      +.+||+||++||+++..........+..+.+...+  ..+++|+++++||||........+...+...       ... +
T Consensus        49 ~~~~d~vi~~GD~~~~~~~~~~~~~~~~~~~~~~l--~~~~~p~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~~~  126 (322)
T 2nxf_A           49 RERVQCVVQLGDIIDGHNRRRDASDRALDTVMAEL--DACSVDVHHVWGNHEFYNFSRPSLLSSRLNSAQRTGTDTGSDL  126 (322)
T ss_dssp             HTTCSEEEECSCCBCTHHHHTTCHHHHHHHHHHHH--HTTCSEEEECCCHHHHHHCCHHHHHTSTTCCCC------CEEC
T ss_pred             hcCCCEEEECCCccCCCCCcchHHHHHHHHHHHHH--HhcCCcEEEecCCCCcccCCHHHHhhhhCCccccccccccccc
Confidence            36899999999999422100000011111122222  2357899999999998421111110001100       000 0


Q ss_pred             --eeeeeeEecC-ceEEEEEEeCccccccccCC----------------CC---CCCCC-cccc-----chhhhhHHHHH
Q 024595           79 --LCSRSFILDA-EIAEFVFVDTTPFVDEYFED----------------PG---DSTYD-WRGV-----YRRKEYLSDLL  130 (265)
Q Consensus        79 --~~~~~y~~~~-~~~~~i~lds~~~~~~~~~~----------------~~---~~~~~-~~~~-----~~~~~~~~~Q~  130 (265)
                        ..+.+|.+.. ++++||+||+..+.......                +.   ..... ..|.     .....+.++|+
T Consensus       127 ~~~~~~~y~~~~~~~~~~i~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~q~  206 (322)
T 2nxf_A          127 IGDDIYAYEFSPAPNFRFVLLDAYDLSVIGREEESEKHTHSWRILTQHNHNLQDLNLPPVSVGLEQRFVKFNGGFSEQQL  206 (322)
T ss_dssp             GGGTCCCEEEEEETTEEEEECCTTSBCSSSSCTTSHHHHHHHHHHHHHCCCTTCTTSCSCSSSGGGGCSTTCCBCCHHHH
T ss_pred             CCCCceEEEEecCCCEEEEEEcCceecccccCCCChhhHHHHHHHhhcCcccccccCccccccccccccccCCccCHHHH
Confidence              0123466775 78999999997642100000                00   00000 0000     00123457999


Q ss_pred             HHHHHHhhcCC--CCeEEEEeccccccCCCCCC-hHHHHHHHHHHHHhC-CccEEEeCCcccceEEe-eCCeEEEEeCCC
Q 024595          131 KDVDGALKNSK--AKWKIVVGHHTIKSAGHHGV-TKELLLRLLPILEEN-NVDMYVNGHDHCLQHIS-SNGIEFLTSGGG  205 (265)
Q Consensus       131 ~wl~~~l~~~~--~~~~iv~~H~P~~~~~~~~~-~~~~~~~l~~~~~~~-~v~~vl~GH~H~~~~~~-~~~~~~i~~g~~  205 (265)
                      +||++.|+..+  .+++||++|+|+++...... .....+.+.++++++ +|+++|+||+|...... ..++.++++|+.
T Consensus       207 ~wL~~~L~~~~~~~~~~iv~~H~p~~~~~~~~~~~~~~~~~~~~ll~~~~~v~~~~~GH~H~~~~~~~~~g~~~i~~~~~  286 (322)
T 2nxf_A          207 QWLDAVLTLSDHKQERVLIFSHLPVHPCAADPICLAWNHEAVLSVLRSHQSVLCFIAGHDHDGGRCTDSSGAQHITLEGV  286 (322)
T ss_dssp             HHHHHHHHHHHHHTCEEEEEESSCCCTTSSCGGGSCTTHHHHHHHHHTCTTEEEEEECSCTTCEEEECTTSCEEEECCCG
T ss_pred             HHHHHHHHHHHhcCCcEEEEEccCCCCCCCCccccccCHHHHHHHHhcCCCeEEEEcCCcCCCCceeccCCceEEEecch
Confidence            99999998854  67889999999986543110 000246788899998 79999999999999887 789999987766


Q ss_pred             CCCCCCCCCCCCCccceeeecCCCeEEEEEeCCeEEEEEEe
Q 024595          206 SKAWRGDRNWWSPEELKLYYDGQGFMSVKMTRSEAVVLFYD  246 (265)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~gy~~~~v~~~~i~~~~~~  246 (265)
                      ...   .            ....+|.++++++++++++.+.
T Consensus       287 ~~~---~------------~~~~~y~~v~~~~~~~~~~~~~  312 (322)
T 2nxf_A          287 IET---P------------PHSHAFATAYLYEDRMVMKGRG  312 (322)
T ss_dssp             GGC---C------------TTSCEEEEEEECSSEEEEEEEE
T ss_pred             hhC---C------------CCCCcEEEEEEECCeEEEEecc
Confidence            221   0            1357999999999999998875

>2xmo_A LMO2642 protein; phosphodiesterase, hydrolase; 1.70A {Listeria monocytogenes}

Probab=99.81  E-value=1.5e-19  Score=158.58  Aligned_cols=210  Identities=16%  Similarity=0.168  Sum_probs=122.6

Q ss_pred             ccccCCCEEEecCCccCCCCCCCCCChhhhhhcccccCCCCCCCceEEcCCCcccCCCccccccc---------------
Q 024595            5 GEKLEIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQKQWYNVLGNHDYRGDVEAQLSP---------------   69 (265)
Q Consensus         5 ~~~~~pd~vv~~GD~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~p~~~i~GNHD~~~~~~~~~~~---------------   69 (265)
                      +++.+||+||++||+++ .|... ....+.+.+..+   ...++|+++++||||+.......+..               
T Consensus        88 ~~~~~~d~vi~~GDl~~-~~~~~-~~~~~~~~l~~l---~~~~~~~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (443)
T 2xmo_A           88 VESKKTDVLIISGDLTN-NGEKT-SHEELAKKLTQV---EKNGTQVFVVPGNHDINNPWARKFEKDKQLPTDTISPTDFS  162 (443)
T ss_dssp             HHHHTCSEEEEESCCBS-SCCHH-HHHHHHHHHHHH---HHTTCEEEEECCTTTSSCTTCEEEETTEEEECCCCCHHHHH
T ss_pred             HHHcCCCEEEECCCCCC-CCCHH-HHHHHHHHHHHH---HhCCCeEEEECCcCCCCCccccccCCcccccccccCHHHHH
Confidence            34568999999999994 33110 001111122221   12378999999999986532211100               


Q ss_pred             -cccccC-CCce----eeeeeE-ecCceEEEEEEeCccccccccCCCCCCCCCccccchhhhhHHHHHHHHHHHhhcC--
Q 024595           70 -VLTRKD-SRWL----CSRSFI-LDAEIAEFVFVDTTPFVDEYFEDPGDSTYDWRGVYRRKEYLSDLLKDVDGALKNS--  140 (265)
Q Consensus        70 -~~~~~~-~~~~----~~~~y~-~~~~~~~~i~lds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~~wl~~~l~~~--  140 (265)
                       .+.... ....    .+..|. +..++++|++||+..+.......+     .+    ....+.++|++||++.|+..  
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~i~Lds~~~~~~~~~~~-----~~----~~g~~~~~ql~wL~~~L~~~~~  233 (443)
T 2xmo_A          163 KIYSDFGYEDAISSDEFSLSYLAAPSSKVWLLMLDTAIYKTNMQQGN-----PT----TEGGLTAGTLDWIKESSALAKK  233 (443)
T ss_dssp             HHTCCCCCTTCSEECSSSSCEEECSBSSEEEEECCCBCCTTHHHHTS-----CC----CCBCCCHHHHHHHHHHHHHHHH
T ss_pred             HHhhhcChhhhhccCCCCceEEEecCCCEEEEEeeCCCcCcccccCC-----CC----cCCccCHHHHHHHHHHHHHHHH
Confidence             000000 0000    012343 346889999999987532110000     00    01224569999999999874  


Q ss_pred             CCCeEEEEeccccccCCCC---CChHHHHHHHHHHHHhCCccEEEeCCcccceEEee---CC--eEEEEeCCCCCCCCCC
Q 024595          141 KAKWKIVVGHHTIKSAGHH---GVTKELLLRLLPILEENNVDMYVNGHDHCLQHISS---NG--IEFLTSGGGSKAWRGD  212 (265)
Q Consensus       141 ~~~~~iv~~H~P~~~~~~~---~~~~~~~~~l~~~~~~~~v~~vl~GH~H~~~~~~~---~~--~~~i~~g~~~~~~~~~  212 (265)
                      ..+++|+++|||+......   .......+.+.+++++++|+++|+||+|.......   ++  +..+.+|+.+.     
T Consensus       234 ~~~~~Iv~~H~p~~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~~~~~~~~~~~g~~~~~i~~gs~~~-----  308 (443)
T 2xmo_A          234 NGAKLIPVLHHNLTDHNDVIQKGYTINYNQQVIDALTEGAMDFSLSGHIHTQNIRSAKSTDGKEITDIVTNALSV-----  308 (443)
T ss_dssp             TTCEEEEECSSBSSCSSCC--CCSBCTTHHHHHHHHHHTTCCEEEECSSCSCEEEEEECTTSCEEEEEECCCTTS-----
T ss_pred             cCCeEEEEECCCCcccccccccccccccHHHHHHHHHHcCCeEEEECCcccCchhhcccCCCCceEEEEcCcccc-----
Confidence            3567899999999764321   11112246788899999999999999999886543   33  33333332211     


Q ss_pred             CCCCCCccceeeecCCCeEEEEEeCCe--EEEEEEe
Q 024595          213 RNWWSPEELKLYYDGQGFMSVKMTRSE--AVVLFYD  246 (265)
Q Consensus       213 ~~~~~~~~~~~~~~~~gy~~~~v~~~~--i~~~~~~  246 (265)
                                   ...+|.+++++++.  ++++.+.
T Consensus       309 -------------~p~~y~il~i~~~~~~~~~~~~~  331 (443)
T 2xmo_A          309 -------------FPHKYGNITYSAKNKNFTYQSQK  331 (443)
T ss_dssp             -------------TTCEEEEEEEETTTTEEEEEEEE
T ss_pred             -------------CCCCeEEEEEeCCCceEEEEEEE
Confidence                         23589999999876  6776664

>2q8u_A Exonuclease, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 2.20A {Thermotoga maritima MSB8} PDB: 3thn_A

Probab=99.65  E-value=1.1e-16  Score=135.38  Aligned_cols=221  Identities=17%  Similarity=0.141  Sum_probs=113.0

Q ss_pred             cccccCCCEEEecCC-ccCCCCCCCCCC-hhhhhhcccccCCCCCCCceEEcCCCcccCCCccccccccccccCCCc-ee
Q 024595            4 IGEKLEIDFVISTGD-NFYEDGLTGEED-PAFLDSFTSIYTAPSLQKQWYNVLGNHDYRGDVEAQLSPVLTRKDSRW-LC   80 (265)
Q Consensus         4 ~~~~~~pd~vv~~GD-~~~~~g~~~~~~-~~~~~~~~~~~~~~~l~~p~~~i~GNHD~~~~~~~~~~~~~~~~~~~~-~~   80 (265)
                      .+++++||+||++|| ++ +.+..+... ..+.+.+..+.   .. +|+++|+||||... ...... .+...+... ..
T Consensus        56 ~~~~~~~D~vliaGD~l~-d~~~~~~~~~~~~~~~l~~L~---~~-~pv~~i~GNHD~~~-~~~~~~-~l~~~g~nv~v~  128 (336)
T 2q8u_A           56 EAEKREVDLILLTGDLLH-SRNNPSVVALHDLLDYLKRMM---RT-APVVVLPGNHDWKG-LKLFGN-FVTSISSDITFV  128 (336)
T ss_dssp             HHHHHTCSEEEEESCSBS-CSSCCCHHHHHHHHHHHHHHH---HH-SCEEECCC-------CHHHHH-HHHHHCSSEEEC
T ss_pred             HHHHhCCCEEEECCcccc-CCCCCCHHHHHHHHHHHHHHH---hc-CCEEEECCCCCccc-cccHHH-HHHhcCCEEEEE
Confidence            455679999999999 66 444322110 11222233221   12 79999999999865 221111 111111000 00


Q ss_pred             e-----eeeEecCceEEEEEEeCccccccccCCCCCCCCCccccchhhhhHHHHHHHHHHHhhc---CCCCeEEEEeccc
Q 024595           81 S-----RSFILDAEIAEFVFVDTTPFVDEYFEDPGDSTYDWRGVYRRKEYLSDLLKDVDGALKN---SKAKWKIVVGHHT  152 (265)
Q Consensus        81 ~-----~~y~~~~~~~~~i~lds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~~wl~~~l~~---~~~~~~iv~~H~P  152 (265)
                      .     ....+..+++.+++++......          ....    .....++|+.|+.+.+..   ....++|+++|.|
T Consensus       129 ~~~~~~~~~~~~~~~v~i~glp~~~~~~----------~~~~----~~~~~~~~~~~~~~~l~~~~~~~~~~~Ill~H~~  194 (336)
T 2q8u_A          129 MSFEPVDVEAKRGQKVRILPFPYPDESE----------ALRK----NEGDFRFFLESRLNKLYEEALKKEDFAIFMGHFT  194 (336)
T ss_dssp             CSSSCEEEECTTSCEEEEEEECCC-----------------C----CSSHHHHHHHHHHHHHHHHHHTCSSEEEEEEESE
T ss_pred             ecccccCceEEeCCCEEEEECCCCCHHH----------HHHH----hhHHHHHHHHHHHHHHHHhccCCCCCEEEEECcc
Confidence            0     0122344678888886432100          0000    011235778888887764   3567899999999


Q ss_pred             cccCCCCCChHHHH-HHHHHHHHhCCccEEEeCCcccceEEeeCCeEEEEeCCCCCCCCCCCCCCCCccceeeecCCCeE
Q 024595          153 IKSAGHHGVTKELL-LRLLPILEENNVDMYVNGHDHCLQHISSNGIEFLTSGGGSKAWRGDRNWWSPEELKLYYDGQGFM  231 (265)
Q Consensus       153 ~~~~~~~~~~~~~~-~~l~~~~~~~~v~~vl~GH~H~~~~~~~~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~gy~  231 (265)
                      +............. ..+...+.+.+++++++||+|..+..... ...+.+|+......+..           ....||.
T Consensus       195 ~~~~~~~~~~~~~~~~~v~~~l~~~~~d~v~~GH~H~~~~~~~~-~~i~y~GS~~~~s~~e~-----------~~~~~~~  262 (336)
T 2q8u_A          195 VEGLAGYAGIEQGREIIINRALIPSVVDYAALGHIHSFREIQKQ-PLTIYPGSLIRIDFGEE-----------ADEKGAV  262 (336)
T ss_dssp             ETTCC--------CCCEECGGGSCTTSSEEEEESCSSCEEEEET-TEEEECCCSSCCSGGGT-----------TCCCEEE
T ss_pred             ccCCCCCCCccchhhcccCHHHccccCCEEEEccccCceEeCCC-ccEEECCCCcCCCcccc-----------CCCCEEE
Confidence            87532110000000 00111233458999999999999876543 33444443321111000           1257999


Q ss_pred             EEEEeCC-eEEEEEEecCCCeEEEEEc
Q 024595          232 SVKMTRS-EAVVLFYDVHGNILHKWSI  257 (265)
Q Consensus       232 ~~~v~~~-~i~~~~~~~~g~~~~~~~i  257 (265)
                      +++++++ .++++++....+++.++.+
T Consensus       263 lv~i~~~~~~~v~~i~~~~r~~~~~~~  289 (336)
T 2q8u_A          263 FVELKRGEPPRYERIDASPLPLKTLYY  289 (336)
T ss_dssp             EEEEETTSCCEEEEEECCCCCEEEEEE
T ss_pred             EEEEeCCCccEEEEEECCCEEEEEeec
Confidence            9999976 5889999876688888665

>1uf3_A Hypothetical protein TT1561; metallo-dependent phosphatases, structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.10A {Thermus thermophilus} SCOP: d.159.1.6

Probab=99.63  E-value=5.7e-16  Score=123.45  Aligned_cols=193  Identities=11%  Similarity=-0.062  Sum_probs=102.0

Q ss_pred             ccccCCCEEEecCCccCCCCCCCCCChhhhhhcccccCCCCCCCceEEcCCCcccCCCcccccccccc--cc--CCCcee
Q 024595            5 GEKLEIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQKQWYNVLGNHDYRGDVEAQLSPVLT--RK--DSRWLC   80 (265)
Q Consensus         5 ~~~~~pd~vv~~GD~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~p~~~i~GNHD~~~~~~~~~~~~~~--~~--~~~~~~   80 (265)
                      +++.+||+||++||++. .+..   ...+.+.++.+   ..+++|+++|+||||....  ..+...+.  ..  ......
T Consensus        28 ~~~~~~D~vi~~GDl~~-~~~~---~~~~~~~~~~l---~~~~~pv~~v~GNHD~~~~--~~~~~~~~~~~~~~~~~~l~   98 (228)
T 1uf3_A           28 APDTGADAIALIGNLMP-KAAK---SRDYAAFFRIL---SEAHLPTAYVPGPQDAPIW--EYLREAANVELVHPEMRNVH   98 (228)
T ss_dssp             HHHHTCSEEEEESCSSC-TTCC---HHHHHHHHHHH---GGGCSCEEEECCTTSCSHH--HHHHHHHHHHHHCTTEEECB
T ss_pred             HhhcCCCEEEECCCCCC-CCCC---HHHHHHHHHHH---HhcCCcEEEECCCCCchhH--HHHHhhhhhhccCcceEEcc
Confidence            34458999999999993 3311   12222222222   1356899999999998542  11110000  00  000111


Q ss_pred             eeeeEecCceEEEEEEeCccccccccCCCCCCCCCccccchhhhhHHHHHHHHHHHhhcCCCCeEEEEeccccccCCC-C
Q 024595           81 SRSFILDAEIAEFVFVDTTPFVDEYFEDPGDSTYDWRGVYRRKEYLSDLLKDVDGALKNSKAKWKIVVGHHTIKSAGH-H  159 (265)
Q Consensus        81 ~~~y~~~~~~~~~i~lds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~~wl~~~l~~~~~~~~iv~~H~P~~~~~~-~  159 (265)
                      ...+.+. ++++++.+++.... .+..    ....   ......   -+..|+++.|++....+.|+++|+|++.... .
T Consensus        99 ~~~~~~~-~~~~i~g~~~~~~~-~~~~----~~~~---~~~~~~---~~~~~~~~~l~~~~~~~~il~~H~p~~~~~~~~  166 (228)
T 1uf3_A           99 ETFTFWR-GPYLVAGVGGEIAD-EGEP----EEHE---ALRYPA---WVAEYRLKALWELKDYPKIFLFHTMPYHKGLNE  166 (228)
T ss_dssp             TSEEEET-TTEEEEEECSEEES-SSCC----BSSS---SCEEEH---HHHHHHHGGGGGSCSCCEEEEESSCBCBTTTBT
T ss_pred             cceEeeC-CCcEEecCCCCcCC-CCcc----Chhh---cccchh---hhHHHHHHHHHhCCCCCeEEEEccCcccCCccc
Confidence            1122232 37888888754311 0000    0000   000001   1234445555555456889999999876411 1


Q ss_pred             CChHHHHHHHHHHHHhCCccEEEeCCcccceEEeeCCeEEEEeCCCCCCCCCCCCCCCCccceeeecCCCeEEEEEeCCe
Q 024595          160 GVTKELLLRLLPILEENNVDMYVNGHDHCLQHISSNGIEFLTSGGGSKAWRGDRNWWSPEELKLYYDGQGFMSVKMTRSE  239 (265)
Q Consensus       160 ~~~~~~~~~l~~~~~~~~v~~vl~GH~H~~~~~~~~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~gy~~~~v~~~~  239 (265)
                      ..    ...+..++++++++++++||+| ......+++.++..|+.+                    ..+|.++++++  
T Consensus       167 ~~----~~~~~~~~~~~~~~~~~~GH~H-~~~~~~~~~~~in~Gs~~--------------------~~~~~i~~~~~--  219 (228)
T 1uf3_A          167 QG----SHEVAHLIKTHNPLLVLVAGKG-QKHEMLGASWVVVPGDLS--------------------EGEYSLLDLRA--  219 (228)
T ss_dssp             TS----BHHHHHHHHHHCCSEEEECCSS-CEEEEETTEEEEECCBGG--------------------GTEEEEEETTT--
T ss_pred             cC----HHHHHHHHHHhCCCEEEEcccc-cCccccCCceEEEecccC--------------------CCceEEEEecc--
Confidence            11    1345667777899999999999 444444677666554332                    34788999876  


Q ss_pred             EEEEEE
Q 024595          240 AVVLFY  245 (265)
Q Consensus       240 i~~~~~  245 (265)
                      ++++++
T Consensus       220 ~~~~~~  225 (228)
T 1uf3_A          220 RKLETG  225 (228)
T ss_dssp             TEEEEE
T ss_pred             eEeeec
Confidence            455544

>2yvt_A Hypothetical protein AQ_1956; structural genomics, unknown function, NPPSFA, national PROJ protein structural and functional analyses; 1.60A {Aquifex aeolicus} SCOP: d.159.1.6

Probab=99.59  E-value=3.6e-15  Score=121.40  Aligned_cols=163  Identities=10%  Similarity=-0.013  Sum_probs=85.6

Q ss_pred             CCCceEEcCCCcccCCCccccccccccccC--CCce-eeeeeEecCceEEEEEEeCccccccccCCCCCCCCCccccchh
Q 024595           46 LQKQWYNVLGNHDYRGDVEAQLSPVLTRKD--SRWL-CSRSFILDAEIAEFVFVDTTPFVDEYFEDPGDSTYDWRGVYRR  122 (265)
Q Consensus        46 l~~p~~~i~GNHD~~~~~~~~~~~~~~~~~--~~~~-~~~~y~~~~~~~~~i~lds~~~~~~~~~~~~~~~~~~~~~~~~  122 (265)
                      +++|+++|+||||.....  .+...+....  +... ......+..++++|++++.......+.      ...   ....
T Consensus        88 ~~~pv~~v~GNHD~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~i~g~~~~~~~~~~~------~~~---~~~~  156 (260)
T 2yvt_A           88 LGVKTFVVPGKNDAPLKI--FLRAAYEAETAYPNIRVLHEGFAGWRGEFEVIGFGGLLTEHEFE------EDF---VLKY  156 (260)
T ss_dssp             TCSEEEEECCTTSCCHHH--HHHHHHHTTTTCTTEEECSSEEEEETTTEEEEEECSEEESSCCB------SSS---SCEE
T ss_pred             cCCcEEEEcCCCCchhhh--hHHHHhhhccCCcceEEecCcceEEECCEEEEecCCCcCCCCcC------HHH---Hhhc
Confidence            468999999999975421  0000011100  0011 111122444678999988643211000      000   0000


Q ss_pred             hhhHHHHHHHHHHHhhcCCCCeEEEEeccccccCC--CC--CChHHHHHHHHHHHHhCCccEEEeCCcccceEEeeCCeE
Q 024595          123 KEYLSDLLKDVDGALKNSKAKWKIVVGHHTIKSAG--HH--GVTKELLLRLLPILEENNVDMYVNGHDHCLQHISSNGIE  198 (265)
Q Consensus       123 ~~~~~~Q~~wl~~~l~~~~~~~~iv~~H~P~~~~~--~~--~~~~~~~~~l~~~~~~~~v~~vl~GH~H~~~~~~~~~~~  198 (265)
                      ..+  ....|| +.+.+......|+++|+|++...  ..  .....-...+..++++++++++++||+| ......+++.
T Consensus       157 ~~~--~~~~~l-~~l~~~~~~~~Il~~H~pp~~~~~d~~~~~~~~~~~~~l~~~~~~~~~~~vl~GH~H-~~~~~~~~~~  232 (260)
T 2yvt_A          157 PRW--YVEYIL-KFVNELKPRRLVTIFYTPPIGEFVDRTPEDPKHHGSAVVNTIIKSLNPEVAIVGHVG-KGHELVGNTI  232 (260)
T ss_dssp             EHH--HHHHHG-GGGGGSCCCEEEEEESSCCSCSSTTCBTTBSCCCSCHHHHHHHHHHCCSEEEECSSC-CEEEEETTEE
T ss_pred             chh--hHHHHH-HHHHhcCCCCEEEEECCCccccccccCcccccccCcHHHHHHHHHhCCCEEEECCcc-CCcEEeCCEE
Confidence            011  112455 44554445677999999986431  10  0000001345667777899999999999 5444446666


Q ss_pred             EEEeCCCCCCCCCCCCCCCCccceeeecCCCeEEEEEeCCeEEEE
Q 024595          199 FLTSGGGSKAWRGDRNWWSPEELKLYYDGQGFMSVKMTRSEAVVL  243 (265)
Q Consensus       199 ~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~gy~~~~v~~~~i~~~  243 (265)
                      ++..|+.+                    ..+|.+++++++++++.
T Consensus       233 ~in~Gs~~--------------------~g~~~ii~~~~~~~~~~  257 (260)
T 2yvt_A          233 VVNPGEFE--------------------EGRYAFLDLTQHKIKLE  257 (260)
T ss_dssp             EEECCBGG--------------------GTEEEEEETTTTEEEEE
T ss_pred             EEeCCCCC--------------------CCceEEEEEcCCEEEee
Confidence            66544332                    12788999988877664

>3av0_A DNA double-strand break repair protein MRE11; DNA repair, calcineurin-like phosphoesterase, ABC transporte domain-like; HET: DNA AGS; 3.10A {Methanocaldococcus jannaschii} PDB: 3auz_A*

Probab=99.55  E-value=4.9e-14  Score=121.21  Aligned_cols=212  Identities=20%  Similarity=0.173  Sum_probs=110.5

Q ss_pred             ccccCCCEEEecCCccCCCCCCCCCC-hhhhhhcccccCCCCCCCceEEcCCCcccCCCcccccc-ccccccCCCceeee
Q 024595            5 GEKLEIDFVISTGDNFYEDGLTGEED-PAFLDSFTSIYTAPSLQKQWYNVLGNHDYRGDVEAQLS-PVLTRKDSRWLCSR   82 (265)
Q Consensus         5 ~~~~~pd~vv~~GD~~~~~g~~~~~~-~~~~~~~~~~~~~~~l~~p~~~i~GNHD~~~~~~~~~~-~~~~~~~~~~~~~~   82 (265)
                      +.+.+||+||++||++. .+...... ..+.+.+..+   ...++|+++|+||||.......... ..+... -..+.+.
T Consensus        56 ~~~~~~D~VliaGDl~d-~~~p~~~~~~~~~~~l~~L---~~~~~pv~~v~GNHD~~~~~~~~~~~~~l~~~-v~~l~~~  130 (386)
T 3av0_A           56 ILEIKPDVVLHSGDLFN-DLRPPVKALRIAMQAFKKL---HENNIKVYIVAGNHEMPRRLGEESPLALLKDY-VKILDGK  130 (386)
T ss_dssp             HHTTCCSEEEECSCSBS-SSSCCHHHHHHHHHHHHHH---HHTTCEEEECCCGGGSCSSTTSCCGGGGGTTT-CEECSEE
T ss_pred             HHHcCCCEEEECCCCCC-CCCCCHHHHHHHHHHHHHH---HhcCCcEEEEcCCCCCCccccccCHHHHHHHH-eEEcCCC
Confidence            44679999999999983 33221000 0112222221   1136899999999998653221100 011111 0011111


Q ss_pred             eeE-ecCceEEEEEEeCccccccccCCCCCCCCCccccchhhhhHHHHHHHHHHHhhcCCCCeEEEEeccccccCCCCCC
Q 024595           83 SFI-LDAEIAEFVFVDTTPFVDEYFEDPGDSTYDWRGVYRRKEYLSDLLKDVDGALKNSKAKWKIVVGHHTIKSAGHHGV  161 (265)
Q Consensus        83 ~y~-~~~~~~~~i~lds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~~wl~~~l~~~~~~~~iv~~H~P~~~~~~~~~  161 (265)
                      .+. .+.+++.+++++.....            .      ... ..+++.|+...+.  ...++|+++|+|+.+... +.
T Consensus       131 ~v~~~~~~~v~i~gl~~~~~~------------~------~~~-~~~~l~~l~~~~~--~~~~~Ill~H~~~~~~~~-~~  188 (386)
T 3av0_A          131 DVINVNGEEIFICGTYYHKKS------------K------REE-MLDKLKNFESEAK--NYKKKILMLHQGINPYIP-LD  188 (386)
T ss_dssp             EEEEETTEEEEEEEECCCCST------------T------HHH-HHHHHHHHHHHHH--TCSSEEEEECCCCTTTSS-SS
T ss_pred             cEEEeCCCCEEEEeCCCCCHH------------H------HHH-HHHHHHHhhhhcc--cCCCEEEEECcCccccCC-CC
Confidence            122 33356777777654210            0      011 1244555554433  356789999999754211 11


Q ss_pred             hHHHHHHHHHHHHhCCccEEEeCCcccceEEeeCCeEEEEeCCCCCCCCCCCCCCCCccceeeecCCCeEEEEEeC---C
Q 024595          162 TKELLLRLLPILEENNVDMYVNGHDHCLQHISSNGIEFLTSGGGSKAWRGDRNWWSPEELKLYYDGQGFMSVKMTR---S  238 (265)
Q Consensus       162 ~~~~~~~l~~~~~~~~v~~vl~GH~H~~~~~~~~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~gy~~~~v~~---~  238 (265)
                      . ..  .+ ..+.  +++++++||+|........+..++.+|+.........       ..+.....||.++++++   +
T Consensus       189 ~-~~--~~-~~l~--~~d~v~~GH~H~~~~~~~~~~~i~ypGS~~~~~~~e~-------~~~~~~~kg~~lv~i~~~~~~  255 (386)
T 3av0_A          189 Y-EL--EH-FDLP--KFSYYALGHIHKRILERFNDGILAYSGSTEIIYRNEY-------EDYKKEGKGFYLVDFSGNDLD  255 (386)
T ss_dssp             C-SS--CG-GGSC--CCSEEEECSCCSCEEEECSSSEEEECCCSSCCSGGGT-------HHHHHHCSEEEEEECCSSSCC
T ss_pred             c-cc--CH-HHhh--hCCeEEccCCCCCccccCCCceEEECCcccccCcchh-------ccccCCCCEEEEEEEecCcCC
Confidence            0 00  00 0121  3899999999998654446666666665532211100       00011357999999987   6


Q ss_pred             eEEEEEEecCCCeEEEEE
Q 024595          239 EAVVLFYDVHGNILHKWS  256 (265)
Q Consensus       239 ~i~~~~~~~~g~~~~~~~  256 (265)
                      .++++++....++.-++.
T Consensus       256 ~~~v~~i~l~~r~~~~~~  273 (386)
T 3av0_A          256 ISDIEKIDIECREFVEVN  273 (386)
T ss_dssp             GGGEEEEECCCCCEEEEE
T ss_pred             CceEEEEECCcceeEEEe
Confidence            678888887666653433

>1z2w_A Vacuolar protein sorting 29; VPS29, retromer, phosphatase, manganese, protein transport; 2.00A {Mus musculus} SCOP: d.159.1.7 PDB: 1z2x_A 3lh6_A 3lh7_A 3psn_A 3pso_A 1w24_A 2r17_A

Probab=99.54  E-value=3.9e-13  Score=104.47  Aligned_cols=100  Identities=18%  Similarity=0.273  Sum_probs=68.6

Q ss_pred             eEEEEeccccccCCCCCChHHHHHHHHHHHHhCCccEEEeCCcccceEEeeCCeEEEEeCCCCCCCCCCCCCCCCcccee
Q 024595          144 WKIVVGHHTIKSAGHHGVTKELLLRLLPILEENNVDMYVNGHDHCLQHISSNGIEFLTSGGGSKAWRGDRNWWSPEELKL  223 (265)
Q Consensus       144 ~~iv~~H~P~~~~~~~~~~~~~~~~l~~~~~~~~v~~vl~GH~H~~~~~~~~~~~~i~~g~~~~~~~~~~~~~~~~~~~~  223 (265)
                      ++|+++|.+++...  ..    .+.+..++++.+++++++||+|.......+++.++..|+.+......-          
T Consensus        90 ~~i~l~Hg~~~~~~--~~----~~~l~~~~~~~~~d~vi~GHtH~~~~~~~~~~~~inpGS~~~~~~~~~----------  153 (192)
T 1z2w_A           90 FKIGLIHGHQVIPW--GD----MASLALLQRQFDVDILISGHTHKFEAFEHENKFYINPGSATGAYNALE----------  153 (192)
T ss_dssp             EEEEEECSCCCCBT--TC----HHHHHHHHHHHSSSEEECCSSCCCEEEEETTEEEEECCCTTCCCCSSC----------
T ss_pred             EEEEEECCCcCCCC--CC----HHHHHHHHHhcCCCEEEECCcCcCccEeECCEEEEECCcccccCCCCC----------
Confidence            46888885544321  11    234555666678999999999999877778999999888765431100          


Q ss_pred             eecCCCeEEEEEeCCeEEEEEEecCCCe--EEEEEccC
Q 024595          224 YYDGQGFMSVKMTRSEAVVLFYDVHGNI--LHKWSIPK  259 (265)
Q Consensus       224 ~~~~~gy~~~~v~~~~i~~~~~~~~g~~--~~~~~i~~  259 (265)
                      .....+|+++++++++++++++..++..  +.+.+++|
T Consensus       154 ~~~~~~y~il~~~~~~~~~~~~~~~~~~~~v~~~~~~~  191 (192)
T 1z2w_A          154 TNIIPSFVLMDIQASTVVTYVYQLIGDDVKVERIEYKK  191 (192)
T ss_dssp             SCCCCEEEEEEEETTEEEEEEEEEETTEEEEEEEEEEC
T ss_pred             cCCCCcEEEEEEECCEEEEEEEEccCCEEEEEEEEEcc
Confidence            0135799999999999999999865544  44555544

>3tho_B Exonuclease, putative; adenosine triphosphate, bacterial proteins, DNA breaks, DOUB stranded, DNA repair, DNA repair enzymes; HET: ADP; 2.61A {Thermotoga maritima} PDB: 3qg5_C

Probab=99.51  E-value=2.1e-14  Score=123.20  Aligned_cols=221  Identities=16%  Similarity=0.152  Sum_probs=112.5

Q ss_pred             cccccCCCEEEecCCccCCCCCCCCCC-hhhhhhcccccCCCCCCCceEEcCCCcccCCCc-cccccccccccCCCce-e
Q 024595            4 IGEKLEIDFVISTGDNFYEDGLTGEED-PAFLDSFTSIYTAPSLQKQWYNVLGNHDYRGDV-EAQLSPVLTRKDSRWL-C   80 (265)
Q Consensus         4 ~~~~~~pd~vv~~GD~~~~~g~~~~~~-~~~~~~~~~~~~~~~l~~p~~~i~GNHD~~~~~-~~~~~~~~~~~~~~~~-~   80 (265)
                      .+.+.+||+||++||++++.+..+... ..+.+.+..+   ... +|+++|+||||..+.. .......+... .... .
T Consensus        38 ~~~~~~~D~vliaGDl~hd~~~~~~~~~~~~~~~l~~l---~~~-~~v~~i~GNHD~~~~~~~~~~~~~~~~~-~~~~~~  112 (379)
T 3tho_B           38 EAEKREVDLILLTGDLLHSRNNPSVVALHDLLDYLKRM---MRT-APVVVLPGNQDWKGLKLFGNFVTSISSD-ITFVMS  112 (379)
T ss_dssp             HHHHHTCSEEEECSCCBSCSSSCCHHHHHHHHHHHHHH---HHH-SCEEECCCTTSCTTHHHHHHHHHTTCSS-EEECCS
T ss_pred             HHHhcCCCEEEECCCccccCCCCCHHHHHHHHHHHHHH---HhC-CCEEEEcCCCccccCccccccccccCCc-ceeecc
Confidence            345679999999999984333221110 1122222222   123 8999999999965410 00000000000 0000 0


Q ss_pred             eeeeEec--Cc-eEEEEEEeCccccccccCCCCCCCCCccccchhhhhHHHHHHHHHHHhh----c--CCCCeEEEEecc
Q 024595           81 SRSFILD--AE-IAEFVFVDTTPFVDEYFEDPGDSTYDWRGVYRRKEYLSDLLKDVDGALK----N--SKAKWKIVVGHH  151 (265)
Q Consensus        81 ~~~y~~~--~~-~~~~i~lds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~~wl~~~l~----~--~~~~~~iv~~H~  151 (265)
                      +..+.+.  .+ .+.++.+.-...            ...     ...+..++..|+.+.+.    .  ....+.|+++|.
T Consensus       113 ~~~v~l~~~~G~~v~i~glp~~~~------------~~~-----~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~I~l~H~  175 (379)
T 3tho_B          113 FEPVDVEAKRGQKVRILPFPYPDE------------SEA-----LRKNEGDFRFFLESRLNKLYEEALKKEDFAIFMGHF  175 (379)
T ss_dssp             SCCEEEECTTCCEEEEEEECCCCC------------C---------CHHHHHHHHHHHHHHHHHHHHHTCSSEEEEEEES
T ss_pred             cceEEEEcCCCCEEEEEECCCCCH------------HHH-----hhhhccchHHHHHHHHHHHHHHhcCCCCCeEEEEec
Confidence            1112221  22 466655532210            000     01134567888888876    2  256788999999


Q ss_pred             ccccCCC-CCChHHHHHHHHHHHHhCCccEEEeCCcccceEEeeCCeEEEEeCCCCCCCCCCCCCCCCccceeeecCCCe
Q 024595          152 TIKSAGH-HGVTKELLLRLLPILEENNVDMYVNGHDHCLQHISSNGIEFLTSGGGSKAWRGDRNWWSPEELKLYYDGQGF  230 (265)
Q Consensus       152 P~~~~~~-~~~~~~~~~~l~~~~~~~~v~~vl~GH~H~~~~~~~~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~gy  230 (265)
                      ++..... .+........+...+...++++|++||+|..+...... ..+.+|+.....   .     .+   .....||
T Consensus       176 ~v~g~~~~~~se~~~~~~v~~~~~~~~~dyvalGH~H~~q~~~~~~-~i~y~GS~~~~~---f-----~E---~~~~k~~  243 (379)
T 3tho_B          176 TVEGLAGYAGIEQGREIIINRALIPSVVDYAALGHIHSFREIQKQP-LTIYPGSLIRID---F-----GE---EADEKGA  243 (379)
T ss_dssp             CBSCCCC-------CSCCBCGGGSCTTSSEEEEESCSSCEEEEETT-EEEECCCSSCCS---G-----GG---SSSCCEE
T ss_pred             cccCCccCCCCccccccccCHHHcCcCCCEEEcccccCCeEeCCCC-cEEecCCCCCCC---c-----cc---ccCCCEE
Confidence            8864322 11100000011111223579999999999997654422 222233221110   0     00   0135799


Q ss_pred             EEEEEeCC-eEEEEEEecCCCeEEEEEcc
Q 024595          231 MSVKMTRS-EAVVLFYDVHGNILHKWSIP  258 (265)
Q Consensus       231 ~~~~v~~~-~i~~~~~~~~g~~~~~~~i~  258 (265)
                      .+++++++ ..+++++......+.+++.+
T Consensus       244 ~lv~~~~~~~~~v~~i~~~~r~~~~~~~~  272 (379)
T 3tho_B          244 VFVELKRGEPPRYERIDASPLPLKTLYYK  272 (379)
T ss_dssp             EEEECCSSSCCEEEEEECCCCCEEEEECS
T ss_pred             EEEEEcCCCcceEEEeCCCCeeeEEEEcC
Confidence            99999865 57888888667888888765

>2a22_A Vacuolar protein sorting 29; alpha-beta-BETA-alpha sandwich, structural genomics, structural genomics consortium, SGC, protein transport; 2.20A {Cryptosporidium parvum} SCOP: d.159.1.7

Probab=99.49  E-value=2.8e-12  Score=101.34  Aligned_cols=93  Identities=23%  Similarity=0.275  Sum_probs=65.3

Q ss_pred             CeEEEEeccccccCCCCCChHHHHHHHHHHHHhCCccEEEeCCcccceEEeeCCeEEEEeCCCCCCCCCCCCCCCCccce
Q 024595          143 KWKIVVGHHTIKSAGHHGVTKELLLRLLPILEENNVDMYVNGHDHCLQHISSNGIEFLTSGGGSKAWRGDRNWWSPEELK  222 (265)
Q Consensus       143 ~~~iv~~H~P~~~~~~~~~~~~~~~~l~~~~~~~~v~~vl~GH~H~~~~~~~~~~~~i~~g~~~~~~~~~~~~~~~~~~~  222 (265)
                      ..+|+++|.+++...  ..    .+.+..++++.+++++++||+|.......+++.++..|+.+......-     .   
T Consensus       113 ~~~i~l~Hg~~~~~~--~~----~~~l~~~~~~~~~d~vl~GHtH~~~~~~~~~~~~inpGS~~~~~~~~~-----~---  178 (215)
T 2a22_A          113 EFKIGLMHGNQVLPW--DD----PGSLEQWQRRLDCDILVTGHTHKLRVFEKNGKLFLNPGTATGAFSALT-----P---  178 (215)
T ss_dssp             TEEEEEECSTTSSST--TC----HHHHHHHHHHHTCSEEEECSSCCCEEEEETTEEEEECCCSSCCCCTTS-----T---
T ss_pred             CeEEEEEcCCccCCC--CC----HHHHHHHHhhcCCCEEEECCcCCCccEeeCCEEEEECCcccccCCCCC-----C---
Confidence            457889996554321  11    234555666678999999999999877778999999888765432100     0   


Q ss_pred             eeecCCCeEEEEEeCCeEEEEEEecCCCe
Q 024595          223 LYYDGQGFMSVKMTRSEAVVLFYDVHGNI  251 (265)
Q Consensus       223 ~~~~~~gy~~~~v~~~~i~~~~~~~~g~~  251 (265)
                        ....+|+++++++++++++++..++..
T Consensus       179 --~~~~~y~il~i~~~~i~~~~~~~~~~~  205 (215)
T 2a22_A          179 --DAPPSFMLMALQGNKVVLYVYDLRDGK  205 (215)
T ss_dssp             --TCCCEEEEEEEETTEEEEEEEEEETTE
T ss_pred             --CCCCcEEEEEEeCCcEEEEEEEecCCe
Confidence              135699999999999999999865443

>3ck2_A Conserved uncharacterized protein (predicted phosphoesterase COG0622); structural genomics, predicted phosphodiesterase, PSI-2; HET: SRT; 2.30A {Streptococcus pneumoniae} SCOP: d.159.1.7

Probab=99.49  E-value=4.4e-13  Score=102.70  Aligned_cols=94  Identities=19%  Similarity=0.144  Sum_probs=71.4

Q ss_pred             eEEEEeccccccCCCCCChHHHHHHHHHHHHhCCccEEEeCCcccceEEeeCCeEEEEeCCCCCCCCCCCCCCCCcccee
Q 024595          144 WKIVVGHHTIKSAGHHGVTKELLLRLLPILEENNVDMYVNGHDHCLQHISSNGIEFLTSGGGSKAWRGDRNWWSPEELKL  223 (265)
Q Consensus       144 ~~iv~~H~P~~~~~~~~~~~~~~~~l~~~~~~~~v~~vl~GH~H~~~~~~~~~~~~i~~g~~~~~~~~~~~~~~~~~~~~  223 (265)
                      .+|+++|+|++....  .    .+.+..++++.+++++++||+|.......+++.++..|+.+.+...            
T Consensus        78 ~~i~~~Hg~~~~~~~--~----~~~l~~~~~~~~~d~vi~GHtH~~~~~~~~~~~~inpGs~~~~~~~------------  139 (176)
T 3ck2_A           78 TKIIQTHGHLFDINF--N----FQKLDYWAQEEEAAICLYGHLHVPSAWLEGKILFLNPGSISQPRGT------------  139 (176)
T ss_dssp             EEEEEECSGGGTTTT--C----SHHHHHHHHHTTCSEEECCSSCCEEEEEETTEEEEEECCSSSCCTT------------
T ss_pred             eEEEEECCCccCCCC--C----HHHHHHHHHhcCCCEEEECCcCCCCcEEECCEEEEECCCCCcCCCC------------
Confidence            478899998764321  1    1345566777899999999999998877789999988877644211            


Q ss_pred             eecCCCeEEEEEeCCeEEEEEEecCCCeEEEEE
Q 024595          224 YYDGQGFMSVKMTRSEAVVLFYDVHGNILHKWS  256 (265)
Q Consensus       224 ~~~~~gy~~~~v~~~~i~~~~~~~~g~~~~~~~  256 (265)
                       ....+|+++++++++++++++..+|+++.+++
T Consensus       140 -~~~~~y~il~~~~~~~~v~~~~~~~~~~~~~~  171 (176)
T 3ck2_A          140 -IRECLYARVEIDDSYFKVDFLTRDHEVYPGLS  171 (176)
T ss_dssp             -CCSCCEEEEEECSSEEEEEEECTTSCBCTTCC
T ss_pred             -CCCCeEEEEEEcCCEEEEEEEEECCEEcchhh
Confidence             11369999999999999999999998877544

>1nnw_A Hypothetical protein; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 1.90A {Pyrococcus furiosus} SCOP: d.159.1.5 PDB: 2gju_A

Probab=99.46  E-value=3.9e-14  Score=114.78  Aligned_cols=111  Identities=5%  Similarity=-0.123  Sum_probs=73.5

Q ss_pred             hhhHHHHHHHHHHHhhcCC---CCeEEEEecccccc-CCCCCChHHHHHHHHHHHHhC-CccEEEeCCcccceEEeeCCe
Q 024595          123 KEYLSDLLKDVDGALKNSK---AKWKIVVGHHTIKS-AGHHGVTKELLLRLLPILEEN-NVDMYVNGHDHCLQHISSNGI  197 (265)
Q Consensus       123 ~~~~~~Q~~wl~~~l~~~~---~~~~iv~~H~P~~~-~~~~~~~~~~~~~l~~~~~~~-~v~~vl~GH~H~~~~~~~~~~  197 (265)
                      ..+.++|++||++......   ...+|+++|+++.. ...........+.+..+++++ +++++++||+|.......+++
T Consensus       108 ~~l~~~~~~~L~~lp~~~~~~~~~~~i~~~H~~p~~~~~~~~~~~~~~~~l~~~~~~~~~~~~vi~GHtH~~~~~~~~~~  187 (252)
T 1nnw_A          108 EKLGHEGREYLRDLPIYLVDKIGGNEVFGVYGSPINPFDGEVLAEQPTSYYEAIMRPVKDYEMLIVASPMYPVDAMTRYG  187 (252)
T ss_dssp             HHHHHHHHHHHHTSCSCEEEEETTEEEEEESSCSSCTTTCCCCSSCCHHHHHHHHGGGTTSSEEEESTTCSEEEEEETTE
T ss_pred             HHCCHHHHHHHHhCCceEEEeeCCcEEEEEcCCCCCCcccccCCCCCHHHHHHHHhcCCCCCEEEECCccccceEecCCe
Confidence            4567889999987433211   34578899988742 211100011124567778777 899999999999988777899


Q ss_pred             EEEEeCCCCCCCCCCCCCCCCccceeeecCCCeEEEEEeCCeEEEEEEe
Q 024595          198 EFLTSGGGSKAWRGDRNWWSPEELKLYYDGQGFMSVKMTRSEAVVLFYD  246 (265)
Q Consensus       198 ~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~gy~~~~v~~~~i~~~~~~  246 (265)
                      .++..|+.+.+..+             ....+|+++++++.++++..+.
T Consensus       188 ~~in~Gs~~~~~~~-------------~~~~~y~il~~~~~~v~~~~v~  223 (252)
T 1nnw_A          188 RVVCPGSVGFPPGK-------------EHKATFALVDVDTLKPKFIEVE  223 (252)
T ss_dssp             EEEEECCSSSCSSS-------------SCCEEEEEEETTTCCEEEEEEC
T ss_pred             EEEECCCccCCCCC-------------CCcceEEEEECCCCeEEEEEeC
Confidence            99998887654211             0245889999987666665553

>1s3l_A Hypothetical protein MJ0936; phosphodiesterase, nuclease, structural genomics, BSGC struc funded by NIH; 2.40A {Methanocaldococcus jannaschii} SCOP: d.159.1.7 PDB: 1s3m_A 1s3n_A 2ahd_A

Probab=99.36  E-value=7.9e-12  Score=96.79  Aligned_cols=72  Identities=14%  Similarity=0.140  Sum_probs=54.0

Q ss_pred             CeEEEEeccccccCCCCCChHHHHHHHHHHHHhC-CccEEEeCCcccceEEeeCCeEEEEeCCCCCCCCCCCCCCCCccc
Q 024595          143 KWKIVVGHHTIKSAGHHGVTKELLLRLLPILEEN-NVDMYVNGHDHCLQHISSNGIEFLTSGGGSKAWRGDRNWWSPEEL  221 (265)
Q Consensus       143 ~~~iv~~H~P~~~~~~~~~~~~~~~~l~~~~~~~-~v~~vl~GH~H~~~~~~~~~~~~i~~g~~~~~~~~~~~~~~~~~~  221 (265)
                      ..+|+++|.|+..             +...+.+. +++++++||+|.......+++.++..|+.+. . ..         
T Consensus       115 ~~~ill~Hg~~~~-------------l~~~~~~~~~~d~vl~GHtH~~~~~~~~~~~~iNpGs~~~-r-~~---------  170 (190)
T 1s3l_A          115 DLKFFITHGHHQS-------------VLEMAIKSGLYDVVIYGHTHERVFEEVDDVLVINPGECCG-Y-LT---------  170 (190)
T ss_dssp             TEEEEEEESCCHH-------------HHHHHHHHSCCSEEEEECSSCCEEEEETTEEEEECCCSSC-T-TT---------
T ss_pred             CcEEEEECCChHH-------------HHHHHHhcCCCCEEEECCCCCcceEEECCEEEEECCcccc-c-CC---------
Confidence            4679999998653             23344444 8999999999999987778999999888764 2 11         


Q ss_pred             eeeecCCCeEEEEEeCCeEEE
Q 024595          222 KLYYDGQGFMSVKMTRSEAVV  242 (265)
Q Consensus       222 ~~~~~~~gy~~~~v~~~~i~~  242 (265)
                          ...+|++++++++++++
T Consensus       171 ----~~~~y~il~~~~~~v~~  187 (190)
T 1s3l_A          171 ----GIPTIGILDTEKKEYRE  187 (190)
T ss_dssp             ----SCCEEEEEETTTTEEEE
T ss_pred             ----CCCEEEEEEcCCCcEEE
Confidence                24689999998876655

>3rqz_A Metallophosphoesterase; PSI-biology, midwest center for structural genomics, MCSG, Zn binding, hydrolase; 1.95A {Sphaerobacter thermophilus} SCOP: d.159.1.0

Probab=99.35  E-value=1.7e-12  Score=104.80  Aligned_cols=106  Identities=11%  Similarity=0.063  Sum_probs=70.3

Q ss_pred             hhHHHHHHHHHHHhhcCCCCeEEEEeccccccCCCCCChHHHHHHHHHHHHhCCccEEEeCCcccceEEe----------
Q 024595          124 EYLSDLLKDVDGALKNSKAKWKIVVGHHTIKSAGHHGVTKELLLRLLPILEENNVDMYVNGHDHCLQHIS----------  193 (265)
Q Consensus       124 ~~~~~Q~~wl~~~l~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~l~~~~~~~~v~~vl~GH~H~~~~~~----------  193 (265)
                      .+.+++++||++....... ..++++|.++..........  ...+..++++.+++++|+||+|......          
T Consensus        92 ~l~~~~~~~L~~lp~~~~~-~~i~~~Hg~p~~~~~~~~~~--~~~~~~~l~~~~~~l~i~GHtH~p~~~~~~~~~~~~~~  168 (246)
T 3rqz_A           92 QLQAEHLQYLESLPNRMID-GDWTVVHGSPRHPIWEYIYN--ARIAALNFPAFDTPLCFVGHTHVPLYIREDEALSNVAP  168 (246)
T ss_dssp             HCCHHHHHHHHHCCSEEEE-TTEEEESSCSSSTTTCCCCS--HHHHHHHGGGCCSSEEECCSSSSEEEEEHHHHHTTCCC
T ss_pred             HcCHHHHHHHHhCCcEEEE-CCEEEEECCcCCccccccCC--hHHHHHHHhccCCCEEEECCcCcccEEEeccccccccc
Confidence            4557889999975433211 25788998776543211111  2456678888899999999999887554          


Q ss_pred             -----------eCCeEEEEeCCCCCCCCCCCCCCCCccceeeecCCCeEEEEEeCCeEEEEEE
Q 024595          194 -----------SNGIEFLTSGGGSKAWRGDRNWWSPEELKLYYDGQGFMSVKMTRSEAVVLFY  245 (265)
Q Consensus       194 -----------~~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~gy~~~~v~~~~i~~~~~  245 (265)
                                 ..+..+++.|+.|.+..+.             ...+|++++.+..++++..+
T Consensus       169 ~~~~~~~~~~l~~g~~ivNpGSVG~Prdg~-------------p~A~Y~i~d~~~~~v~~~rv  218 (246)
T 3rqz_A          169 HHPNDGEVLDVSSGRYIINPGAVGQPRDGD-------------PRASYAIFEPDAQRVTFHRV  218 (246)
T ss_dssp             BCCCTTCEEECSSSCEEEEECCSSCCCSSC-------------CSEEEEEEEGGGTEEEEEEE
T ss_pred             ccccccceeecCCCeEEEECCccCCCCCcC-------------CcceEEEEECCCCEEEEEEe
Confidence                       2357788888887654221             23489999998777766554

>3qfm_A SAPH, putative uncharacterized protein; sandwich fold, asymmetric AP4A hydrolase, phosphodiesterase, binding, Mn2+ binding, hydrolase; 1.90A {Streptococcus pneumoniae} PDB: 3qfn_A 3qfo_A*

Probab=99.33  E-value=1.2e-12  Score=107.07  Aligned_cols=115  Identities=10%  Similarity=0.048  Sum_probs=73.2

Q ss_pred             hHHHHHHHHHHHhhcC---CCCeEEEEeccccccCCCCC-ChHHHHHHHHHHHHhCCccEEEeCCcccceEEe-eCCeEE
Q 024595          125 YLSDLLKDVDGALKNS---KAKWKIVVGHHTIKSAGHHG-VTKELLLRLLPILEENNVDMYVNGHDHCLQHIS-SNGIEF  199 (265)
Q Consensus       125 ~~~~Q~~wl~~~l~~~---~~~~~iv~~H~P~~~~~~~~-~~~~~~~~l~~~~~~~~v~~vl~GH~H~~~~~~-~~~~~~  199 (265)
                      +.+++++||++.....   -....|+++|.++....... ......+.+..++++.+++++++||+|...... .++..+
T Consensus       108 L~~~~~~~L~~LP~~~~~~~~g~~i~lvHg~p~~~~~~~~~~~~~~~~l~~~~~~~~~d~~i~GHtH~~~~~~~~~~~~~  187 (270)
T 3qfm_A          108 ISLEEIEVLHNQPLQIHRQFGDLTVGISHHLPDKNWGRELIHTGKQEEFDRLVTHPPCDIAVYGHIHQQLLRYGTGGQLI  187 (270)
T ss_dssp             SCHHHHHHHHSCCSEEEEEETTEEEEEESSBTTBSSSSTTSTTCCHHHHHHTTTTTTCSEEECCSSCSEEEEECTTSCEE
T ss_pred             cCHHHHHHHHhCCCceEEEECCcEEEEEECCCCCCCCceecCCCcHHHHHHHhcccCCCEEEECCcCchHheeccCCEEE
Confidence            4568899998654331   13457788887665431111 111112445666767789999999999887766 478999


Q ss_pred             EEeCCCCCCCCCCCCCCCCccceeeecCCCeEEEEEeCCe-EEEEEEe
Q 024595          200 LTSGGGSKAWRGDRNWWSPEELKLYYDGQGFMSVKMTRSE-AVVLFYD  246 (265)
Q Consensus       200 i~~g~~~~~~~~~~~~~~~~~~~~~~~~~gy~~~~v~~~~-i~~~~~~  246 (265)
                      ++.|+.|.+..+...   .   . ......|++++++++. ++++++.
T Consensus       188 iNpGSvg~pr~~~~~---~---~-~~~~asyaild~~~~~~~~v~~~r  228 (270)
T 3qfm_A          188 VNPGSIGQPFFLDAQ---L---R-KDLRAQYMILEFDDKGLVDMDFRR  228 (270)
T ss_dssp             EEECCSSSCCCSSTT---G---G-GCCCEEEEEEEEETTEEEEEEEEE
T ss_pred             EECCCccCCCCCCcc---c---c-CCCCCEEEEEEecCCCceEEEEEE
Confidence            999999876432110   0   0 0124589999999875 5777764

>3rl5_A Metallophosphoesterase mpped2; alpha-beta fold, metallophosphodiesterase, active site mutan nucleotide polymorphism, hydrolase; 1.26A {Rattus norvegicus} PDB: 3rl3_A* 3rl4_A*

Probab=99.32  E-value=9.3e-12  Score=102.11  Aligned_cols=73  Identities=10%  Similarity=0.005  Sum_probs=48.8

Q ss_pred             hcCCCCeEEEEeccccccCCCCC---ChHHHHHHHHHHH-HhCCccEEEeCCcccceEEe-eCCeEEEEeCCCCCCCC
Q 024595          138 KNSKAKWKIVVGHHTIKSAGHHG---VTKELLLRLLPIL-EENNVDMYVNGHDHCLQHIS-SNGIEFLTSGGGSKAWR  210 (265)
Q Consensus       138 ~~~~~~~~iv~~H~P~~~~~~~~---~~~~~~~~l~~~~-~~~~v~~vl~GH~H~~~~~~-~~~~~~i~~g~~~~~~~  210 (265)
                      ..-.....|+++|.|++......   ....-.+.+...+ ++.+++++++||+|...... .+++.+++.|+.+....
T Consensus       203 ~~ip~~~dILvTH~PP~g~~D~~~~~~~~~G~~~L~~~i~~~~~p~l~v~GH~H~~~~~~~~g~t~vvNpGs~~~~~~  280 (296)
T 3rl5_A          203 NLIPEGTDILMTHGPPLGFRDWVPKELQRVGCVELLNTVQRRVRPKLHVFGGIHEGYGTMTDGYTTYINASTCTVSFQ  280 (296)
T ss_dssp             TTSCTTCSEEEESSCBTTSSCEEGGGTEECSBHHHHHHHHHTTCCSEEEECSCGGGCEEEECSSCEEEECBCSCTTSC
T ss_pred             hhCCCCCeEEEECCCccccccccccccCcCChHHHHHHHHHhcCCCEEEECCccCCCceEEECCEEEEECCcCCcCcC
Confidence            33344567999999998753210   0000014456666 57899999999999986544 47888998888876543

>1ii7_A MRE11 nuclease; RAD50, DNA double-strand break repair, DAMP, manganese, replication; HET: DA; 2.20A {Pyrococcus furiosus} SCOP: d.159.1.4 PDB: 3dsc_A* 3dsd_A* 1s8e_A

Probab=99.28  E-value=1.5e-11  Score=103.58  Aligned_cols=106  Identities=18%  Similarity=0.159  Sum_probs=56.3

Q ss_pred             CeEEEEeccccccCCC----CCChHHHHHHHHHHHHhCCccEEEeCCcccceEEeeCCeEEEEeCCCCCCCCCCCC---C
Q 024595          143 KWKIVVGHHTIKSAGH----HGVTKELLLRLLPILEENNVDMYVNGHDHCLQHISSNGIEFLTSGGGSKAWRGDRN---W  215 (265)
Q Consensus       143 ~~~iv~~H~P~~~~~~----~~~~~~~~~~l~~~~~~~~v~~vl~GH~H~~~~~~~~~~~~i~~g~~~~~~~~~~~---~  215 (265)
                      ..+|+++|.|+.....    .+....    +..+.  .++++|++||+|..+.....+...+.+|+......+...   +
T Consensus       166 ~~~Ill~H~~~~~~~~~~~~~~~~~~----~~~l~--~~~dyvalGH~H~~q~~~~~~~~i~ypGS~~~~~~~E~~~~~~  239 (333)
T 1ii7_A          166 DNAILMLHQGVREVSEARGEDYFEIG----LGDLP--EGYLYYALGHIHKRYETSYSGSPVVYPGSLERWDFGDYEVRYE  239 (333)
T ss_dssp             SSEEEEEECCBHHHHHTTTCCCCSBC----GGGSC--TTCSEEEEESCSSCEEEEETTEEEEECCCSSCCSGGGCSEEEE
T ss_pred             CCeEEEEcCChhhcccccccccceec----HHHCC--ccCCEEEccccccceecCCCCceEEEcCCCeecccchhccccc
Confidence            3589999998743210    010000    01111  368999999999999765556666665555322111110   0


Q ss_pred             CCCcc-ceeeecCCCeEEEEEeCCeEEEEEEecCCCeEEEEEcc
Q 024595          216 WSPEE-LKLYYDGQGFMSVKMTRSEAVVLFYDVHGNILHKWSIP  258 (265)
Q Consensus       216 ~~~~~-~~~~~~~~gy~~~~v~~~~i~~~~~~~~g~~~~~~~i~  258 (265)
                      +.... ........||.+++    ..+++++...-.++.+++|.
T Consensus       240 ~~G~~~~p~~~~~kg~~lv~----~~~~~~i~l~~r~~~~~~i~  279 (333)
T 1ii7_A          240 WDGIKFKERYGVNKGFYIVE----DFKPRFVEIKVRPFIDVKIK  279 (333)
T ss_dssp             ECSSSEEEEECCCCEEEEEE----TTEEEEEECCCCCEEEEEEE
T ss_pred             cccccccccccCCCeEEEEe----cCceeEEECCCCceEEEEec
Confidence            00000 00012367999998    25677777555777666554

>3t1i_A Double-strand break repair protein MRE11A; DNA repair, MRN complex, metallophosphatase, exonuclease, endonuclease, RAD50, NBS1, hydrolase; 3.00A {Homo sapiens}

Probab=99.28  E-value=6.4e-11  Score=102.09  Aligned_cols=98  Identities=12%  Similarity=0.080  Sum_probs=59.5

Q ss_pred             CeEEEEeccccccCCCCCChHHHHHHHHHHHHhCCccEEEeCCcccceEEee----CCeEEEEeCCCCCCCCCCCCCCCC
Q 024595          143 KWKIVVGHHTIKSAGHHGVTKELLLRLLPILEENNVDMYVNGHDHCLQHISS----NGIEFLTSGGGSKAWRGDRNWWSP  218 (265)
Q Consensus       143 ~~~iv~~H~P~~~~~~~~~~~~~~~~l~~~~~~~~v~~vl~GH~H~~~~~~~----~~~~~i~~g~~~~~~~~~~~~~~~  218 (265)
                      .+.|+++|......+......   +    -+...++++|+.||+|..+....    .++..+..|+.....   +   ..
T Consensus       230 ~~~Ilv~H~~~~~~g~~~~ip---~----~l~~~~~Dyv~lGH~H~~~~~~~~~~~~~~~i~yPGS~~~~s---~---~e  296 (431)
T 3t1i_A          230 WFNLFVIHQNRSKHGSTNFIP---E----QFLDDFIDLVIWGHEHECKIAPTKNEQQLFYISQPGSSVVTS---L---SP  296 (431)
T ss_dssp             EEEEEEECSCCSCSSSSSSCC---G----GGSCTTCCEEEECSCCSCEEEEEECTTTCCEEEECCCSSCCS---C---CH
T ss_pred             ceEEEEECCCccCCCccccCC---H----hHhhCCCCEEEecccccccccccccCCCCEEEEeCCCCcccC---c---Cc
Confidence            478999999764322111100   1    12345789999999999987542    345555544433211   0   00


Q ss_pred             ccceeeecCCCeEEEEEeCCeEEEEEEecC-CCeEEEEEc
Q 024595          219 EELKLYYDGQGFMSVKMTRSEAVVLFYDVH-GNILHKWSI  257 (265)
Q Consensus       219 ~~~~~~~~~~gy~~~~v~~~~i~~~~~~~~-g~~~~~~~i  257 (265)
                          -.....||.+++++++.++++++... -+++...+|
T Consensus       297 ----~E~~~k~~~lvei~~~~~~ve~i~l~~~R~f~~~~v  332 (431)
T 3t1i_A          297 ----GEAVKKHVGLLRIKGRKMNMHKIPLHTVRQFFMEDI  332 (431)
T ss_dssp             ----HHHSCCEEEEEEEETTEEEEEEEECSSSCCEEEEEE
T ss_pred             ----ccCCCCEEEEEEEECCEEEEEEEECCCcceEEEEEE
Confidence                00246799999999999999999865 465554444

>4fbw_A DNA repair protein RAD32; DNA double-strand break repair, nuclease, hydrolase; HET: DNA; 2.20A {Schizosaccharomyces pombe} PDB: 4fcx_B*

Probab=99.28  E-value=1.1e-10  Score=100.19  Aligned_cols=96  Identities=10%  Similarity=0.056  Sum_probs=60.3

Q ss_pred             CCCeEEEEeccccccCCCCCChHHHHHHHHHHHHhCCccEEEeCCcccceEEe----eCCeEEEEeCCCCCCCCCCCCCC
Q 024595          141 KAKWKIVVGHHTIKSAGHHGVTKELLLRLLPILEENNVDMYVNGHDHCLQHIS----SNGIEFLTSGGGSKAWRGDRNWW  216 (265)
Q Consensus       141 ~~~~~iv~~H~P~~~~~~~~~~~~~~~~l~~~~~~~~v~~vl~GH~H~~~~~~----~~~~~~i~~g~~~~~~~~~~~~~  216 (265)
                      ...+.|+++|.+...........+       -+...++++|++||+|..+...    ..++..+..|+.....   .   
T Consensus       209 ~~~~nIlvlH~~~~~~~~~~yip~-------~l~~~~~DyvalGH~H~~~~~~~~~~~~g~~i~~PGS~~~~s---~---  275 (417)
T 4fbw_A          209 DEWFNLLTVHQNHSAHTPTSYLPE-------SFIQDFYDFVLWGHEHECLIDGSYNPTQKFTVVQPGSTIATS---L---  275 (417)
T ss_dssp             TTSEEEEEEESCSSCSSSSSSCCG-------GGSCTTCSEEEEESCCSCEEEEEEETTTTEEEEECCCSSCSS---C---
T ss_pred             CCceEEEEecCCccCCCCcccCch-------hHhhcCCCEEEecCccccceeccccCCCCEEEEECCCCCcCC---C---
Confidence            345789999997754322111111       1444689999999999998764    2455665555443211   0   


Q ss_pred             CCccceeeecCCCeEEEEEeCCeEEEEEEecCC-CeEE
Q 024595          217 SPEELKLYYDGQGFMSVKMTRSEAVVLFYDVHG-NILH  253 (265)
Q Consensus       217 ~~~~~~~~~~~~gy~~~~v~~~~i~~~~~~~~g-~~~~  253 (265)
                      ...    .....||.+++++++.++++.+.... ++..
T Consensus       276 ~e~----E~~~kg~~lvei~~~~~~~e~i~l~~~Rpf~  309 (417)
T 4fbw_A          276 SPG----ETAPKHCGILNITGKDFHLEKIRLRTVRPFI  309 (417)
T ss_dssp             CHH----HHSCCEEEEEEEETTEEEEEEEECSSSCCEE
T ss_pred             ccc----cCCCCEEEEEEEECCEEEEEEEECCCcccEE
Confidence            000    01467999999999999999988554 5443

>4fbk_A DNA repair and telomere maintenance protein NBS1, protein RAD32 chimeric protein; DNA double-strand break repair, nuclease; HET: DNA; 2.38A {Schizosaccharomyces pombe} PDB: 4fbq_A*

Probab=99.27  E-value=1.1e-10  Score=100.95  Aligned_cols=100  Identities=11%  Similarity=0.037  Sum_probs=61.9

Q ss_pred             CCeEEEEeccccccCCCCCChHHHHHHHHHHHHhCCccEEEeCCcccceEEee----CCeEEEEeCCCCCCCCCCCCCCC
Q 024595          142 AKWKIVVGHHTIKSAGHHGVTKELLLRLLPILEENNVDMYVNGHDHCLQHISS----NGIEFLTSGGGSKAWRGDRNWWS  217 (265)
Q Consensus       142 ~~~~iv~~H~P~~~~~~~~~~~~~~~~l~~~~~~~~v~~vl~GH~H~~~~~~~----~~~~~i~~g~~~~~~~~~~~~~~  217 (265)
                      ..+.|+++|.+...........+       -+...++++|+.||+|..+....    .++..+..|+......  .    
T Consensus       273 ~~~nIlvlH~~~~~~~~~~yipe-------~ll~~g~DyValGH~H~~~~~~~~~~~~g~~ivyPGS~~~~s~--~----  339 (472)
T 4fbk_A          273 EWFNLLTVHQNHSAHTPTSYLPE-------SFIQDFYDFVLWGHEHECLIDGSYNPTQKFTVVQPGSTIATSL--S----  339 (472)
T ss_dssp             GEEEEEEEESCSCCSSTTSSCCG-------GGSCTTCSEEEEESCCSCEEEEEEETTTTEEEEECCCSSCSSC--C----
T ss_pred             CceEEEEecCCccCCCccccCCh-------hhhhcCCCEEEecCcccceeeecccCCCCeEEEECCCcccccc--C----
Confidence            34689999998764432111111       13345799999999999987642    4555555554322110  0    


Q ss_pred             CccceeeecCCCeEEEEEeCCeEEEEEEecCC-CeEEEEEcc
Q 024595          218 PEELKLYYDGQGFMSVKMTRSEAVVLFYDVHG-NILHKWSIP  258 (265)
Q Consensus       218 ~~~~~~~~~~~gy~~~~v~~~~i~~~~~~~~g-~~~~~~~i~  258 (265)
                      ..    .....||.+++++++.++++++.... +++...+|.
T Consensus       340 e~----E~~~kg~~lveI~~~~v~ve~I~L~t~Rpf~~~~i~  377 (472)
T 4fbk_A          340 PG----ETAPKHCGILNITGKDFHLEKIRLRTVRPFIMKDII  377 (472)
T ss_dssp             GG----GCSCCEEEEEEEETTEEEEEEEECSSSCCEEEEEEE
T ss_pred             cc----CCCCCEEEEEEEECCEEEEEEEECCCcccEEEEEEE
Confidence            00    01367999999999999999998554 655555543

>2kkn_A Uncharacterized protein; protein phosphatase 2A homologue, structural genomics, PSI- 2, protein structure initiative; NMR {Thermotoga maritima}

Probab=99.19  E-value=5e-10  Score=85.64  Aligned_cols=75  Identities=19%  Similarity=0.256  Sum_probs=52.6

Q ss_pred             eEEEEeccccccCCCCCChHHHHHHHHHHHHhCCccEEEeCCcccceEEeeCCeEEEEeCCCCCCCCCCCCCCCCcccee
Q 024595          144 WKIVVGHHTIKSAGHHGVTKELLLRLLPILEENNVDMYVNGHDHCLQHISSNGIEFLTSGGGSKAWRGDRNWWSPEELKL  223 (265)
Q Consensus       144 ~~iv~~H~P~~~~~~~~~~~~~~~~l~~~~~~~~v~~vl~GH~H~~~~~~~~~~~~i~~g~~~~~~~~~~~~~~~~~~~~  223 (265)
                      .+|+++|....       .......+...+. .+++++++||+|.......+++.++..|+.+.                
T Consensus       103 ~~i~l~HG~~~-------~~~~~~~~~~~~~-~~~d~vi~GHtH~~~~~~~~~~~~iNpGS~~~----------------  158 (178)
T 2kkn_A          103 VTIGMCHGWGA-------PWDLKDRLLKVFN-EKPQVILFGHTHEPEDTVKAGVRFLNPGSLAE----------------  158 (178)
T ss_dssp             EEEEECCSCCC-------HHHHHHHHHHHSS-SCCSEEECCSCSSCCEEEETTEEEECCCCTTT----------------
T ss_pred             EEEEEECCCCC-------CCCHHHHHHHHhc-cCCCEEEECccCCCCeEEeCCEEEEECCCCCC----------------
Confidence            46778886432       1122233334444 67899999999999877678888887665442                


Q ss_pred             eecCCCeEEEEEeCCeEEEEEEe
Q 024595          224 YYDGQGFMSVKMTRSEAVVLFYD  246 (265)
Q Consensus       224 ~~~~~gy~~~~v~~~~i~~~~~~  246 (265)
                          .+|+++++++++++++++.
T Consensus       159 ----~sy~il~~~~~~~~~~~~~  177 (178)
T 2kkn_A          159 ----GSYAVLELDGGEVRFELKT  177 (178)
T ss_dssp             ----TEEEEEEEETTEEEEEEEE
T ss_pred             ----CeEEEEEECCCEEEEEEEe
Confidence                5899999999999988864

>1xm7_A Hypothetical protein AQ_1665; structural genomics, protein structure initi midwest center for structural genomics, PSI, MCSG, unknown; 2.40A {Aquifex aeolicus} SCOP: d.159.1.8

Probab=99.08  E-value=8.9e-10  Score=85.55  Aligned_cols=62  Identities=18%  Similarity=0.164  Sum_probs=43.2

Q ss_pred             CeEEEEeccccccCCCCCChHHHHHHHHHHHHhCCccEEEeCCcccceEEeeC-----CeEEEEeCCC
Q 024595          143 KWKIVVGHHTIKSAGHHGVTKELLLRLLPILEENNVDMYVNGHDHCLQHISSN-----GIEFLTSGGG  205 (265)
Q Consensus       143 ~~~iv~~H~P~~~~~~~~~~~~~~~~l~~~~~~~~v~~vl~GH~H~~~~~~~~-----~~~~i~~g~~  205 (265)
                      ..+|+++|+|+......... ...+.+..++++++++++++||+|........     ++.++.+|+.
T Consensus       106 ~~~i~~~H~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~vi~GHtH~~~~~~~~g~~~~g~~~~nvg~~  172 (195)
T 1xm7_A          106 GKRILLSHYPAKDPITERYP-DRQEMVREIYFKENCDLLIHGHVHWNREGIKCACKDYRIECINANVE  172 (195)
T ss_dssp             TEEEEEESSCSSCSSCCSCH-HHHHHHHHHHHHTTCSEEEECCCCCCSCC--CCTTSSSCCEEECBGG
T ss_pred             CcEEEEEccCCcCCCccccc-chHHHHHHHHHHcCCcEEEECCcCCCCcccccccccCCcceEEEeEe
Confidence            45799999998765322221 22467888888889999999999998765443     6777766543

>1su1_A Hypothetical protein YFCE; structural genomics, phosphoesterase, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.25A {Escherichia coli} SCOP: d.159.1.7

Probab=99.07  E-value=5.1e-09  Score=82.11  Aligned_cols=83  Identities=16%  Similarity=0.159  Sum_probs=58.5

Q ss_pred             eEEEEeccccccCCCCCChHHHHHHHHHHHHhCCccEEEeCCcccceEEeeCCeEEEEeCCCCCCCCCCCCCCCCcccee
Q 024595          144 WKIVVGHHTIKSAGHHGVTKELLLRLLPILEENNVDMYVNGHDHCLQHISSNGIEFLTSGGGSKAWRGDRNWWSPEELKL  223 (265)
Q Consensus       144 ~~iv~~H~P~~~~~~~~~~~~~~~~l~~~~~~~~v~~vl~GH~H~~~~~~~~~~~~i~~g~~~~~~~~~~~~~~~~~~~~  223 (265)
                      .+|+++|.+++....-          .. +  ...+++++||+|.......+++.++..|+.+.+..+            
T Consensus       123 ~~i~l~Hg~~~~~~~l----------~~-~--~~~d~vi~GHtH~~~~~~~~~~~~iNpGs~~~pr~~------------  177 (208)
T 1su1_A          123 QRLFLTHGHLFGPENL----------PA-L--NQNDVLVYGHTHLPVAEQRGEIFHFNPGSVSIPKGG------------  177 (208)
T ss_dssp             CEEEEECSSSSBTTBC----------CC-C--CTTCEEECCSSCCCEEEEETTEEEEECCCSSCCCTT------------
T ss_pred             cEEEEECCCCCCcchh----------hh-h--cCCCEEEECCcccCccEEeCCEEEEECCCCcCCCCC------------
Confidence            4788999887643210          00 1  134899999999998777788889888877643210            


Q ss_pred             eecCCCeEEEEEeCCeEEEEEEecCCCeEEEEEc
Q 024595          224 YYDGQGFMSVKMTRSEAVVLFYDVHGNILHKWSI  257 (265)
Q Consensus       224 ~~~~~gy~~~~v~~~~i~~~~~~~~g~~~~~~~i  257 (265)
                        ...+|++++.  +  ++++++.+|+++.++++
T Consensus       178 --~~~sy~il~~--~--~~~~~~~~~~~~~~~~~  205 (208)
T 1su1_A          178 --NPASYGMLDN--D--VLSVIALNDQSIIAQVA  205 (208)
T ss_dssp             --CCCEEEEEET--T--EEEEEETTTCCEEEEEE
T ss_pred             --CCCEEEEEEC--C--eEEEEEeCCCEEEEEec
Confidence              2358889884  3  57778889999998887

>1hp1_A 5'-nucleotidase; metallophosphatase, dinuclear, metalloenzyme, hydrolase, domain movement; HET: ATP; 1.70A {Escherichia coli} SCOP: d.114.1.1 d.159.1.2 PDB: 1ush_A 2ush_A 1hpu_A* 1ho5_A* 1oi8_A 1oid_A 1oie_A

Probab=98.57  E-value=6.4e-07  Score=79.73  Aligned_cols=52  Identities=21%  Similarity=0.238  Sum_probs=31.3

Q ss_pred             CCCeEEEEeccccccCCCCCChHHHHHHHHHHHHhCCccEEEeCCcccceEE
Q 024595          141 KAKWKIVVGHHTIKSAGHHGVTKELLLRLLPILEENNVDMYVNGHDHCLQHI  192 (265)
Q Consensus       141 ~~~~~iv~~H~P~~~~~~~~~~~~~~~~l~~~~~~~~v~~vl~GH~H~~~~~  192 (265)
                      +...+|+++|.|.......+........+...+...+|+++|+||+|.....
T Consensus       183 ~~d~iI~l~H~g~~~~~~~~~~~~~~~~la~~~~~~~iDlilgGHtH~~~~~  234 (516)
T 1hp1_A          183 KPDIIIAATHMGHYDNGEHGSNAPGDVEMARALPAGSLAMIVGGHSQDPVCM  234 (516)
T ss_dssp             CCSEEEEEEESCCCGGGCCTTSCCCHHHHHHHSCTTSSSEEECCSSCCBCCE
T ss_pred             CCCEEEEEecCCccCCCcccccCchHHHHHHhCCCCceeEEECCCCCccccc
Confidence            5678999999997543322211010122333333345999999999987643

>1g5b_A Serine/threonine protein phosphatase; bacteriophage lambda, Ser/Thr protein phosphatase, ppase, manganese, sulfate, viral protein; 2.15A {Enterobacteria phage lambda} SCOP: d.159.1.3

Probab=98.32  E-value=9.3e-07  Score=69.74  Aligned_cols=83  Identities=12%  Similarity=0.103  Sum_probs=47.4

Q ss_pred             hhhHHHHHHHHHHHhhcC---CCCeEEEEeccccccCC----CCCChHHH---HHHHHHHHH-----hCCccEEEeCCcc
Q 024595          123 KEYLSDLLKDVDGALKNS---KAKWKIVVGHHTIKSAG----HHGVTKEL---LLRLLPILE-----ENNVDMYVNGHDH  187 (265)
Q Consensus       123 ~~~~~~Q~~wl~~~l~~~---~~~~~iv~~H~P~~~~~----~~~~~~~~---~~~l~~~~~-----~~~v~~vl~GH~H  187 (265)
                      ..+.+++++||+......   -...+++++|..+.+..    ........   +..+...++     ..++++|++||+|
T Consensus       109 ~~l~~~~~~~l~~lP~~~~~~~~~~~i~~vHgg~~~~~~~~~~~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~vv~GHth  188 (221)
T 1g5b_A          109 EILAKALAHKADELPLIIELVSKDKKYVICHADYPFDEYEFGKPVDHQQVIWNRERISNSQNGIVKEIKGADTFIFGHTP  188 (221)
T ss_dssp             HHHHHHHHHHHTTCCSEEEEEETTEEEEECSSCCCSSBCCTTCCCCHHHHHHCCHHHHHHHTTCCCCCBTSSEEEECSSC
T ss_pred             HHHHHHHHHHHHhCCcEEEEEecCCeEEEEecCCChhhcccCCCccccccccCchhhhhhccccCCcccCCCEEEECCCC
Confidence            345567778876542221   12357888997543221    11111111   123333344     3467899999999


Q ss_pred             cceEEeeCCeEEEEeCCC
Q 024595          188 CLQHISSNGIEFLTSGGG  205 (265)
Q Consensus       188 ~~~~~~~~~~~~i~~g~~  205 (265)
                      .......+++.++.+|+.
T Consensus       189 ~~~~~~~~~~~~in~Gs~  206 (221)
T 1g5b_A          189 AVKPLKFANQMYIDTGAV  206 (221)
T ss_dssp             CSSCEEETTEEECCCCHH
T ss_pred             CccceeeCCEEEEECCCC
Confidence            987766788878766654

>2wdc_A SOXB, sulfur oxidation protein SOXB; sulfur-sulfur hydrolysis, sulfur oxidation pathway, Cys S-thiosulfonate, hydrolase; 1.50A {Thermus thermophilus} PDB: 2wdd_A* 2wde_A 2wdf_A

Probab=98.13  E-value=5e-06  Score=74.57  Aligned_cols=56  Identities=14%  Similarity=0.284  Sum_probs=34.5

Q ss_pred             HhhcCCCCeEEEEeccccccCCCCCChHHHHHHHHHHHHh-CCccEEEeCCcccceEE--eeCCeEEEEeCC
Q 024595          136 ALKNSKAKWKIVVGHHTIKSAGHHGVTKELLLRLLPILEE-NNVDMYVNGHDHCLQHI--SSNGIEFLTSGG  204 (265)
Q Consensus       136 ~l~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~l~~~~~~-~~v~~vl~GH~H~~~~~--~~~~~~~i~~g~  204 (265)
                      .|++.....+|+++|.|...        +     ..+.++ .+|+++|+||+|.....  ..+++..+.+|+
T Consensus       249 ~l~~~~~d~iIvLsH~g~~~--------d-----~~la~~~~giDlIlgGHtH~~~~~~~~~~~t~vvqag~  307 (562)
T 2wdc_A          249 KARAEGANAVVLLSHNGMQL--------D-----AALAERIRGIDLILSGHTHDLTPRPWRVGKTWIVAGSA  307 (562)
T ss_dssp             HHHHTTCSEEEEEECSCHHH--------H-----HHHHTTSSSCCEEEECSSCCCCSSCEEETTEEEEECCS
T ss_pred             HHHHCCCCEEEEEeCCCCcc--------h-----HHHHhcCCCCcEEEeCCCCCCCccCEEECCEEEEecCc
Confidence            34444567889999997521        1     123444 48999999999987532  125555544443

>2z1a_A 5'-nucleotidase; metal-binding, nucleotide-binding, hydrolase, structural genomics, NPPSFA; HET: THM; 1.75A {Thermus thermophilus} SCOP: d.114.1.1 d.159.1.2

Probab=98.07  E-value=4.4e-06  Score=74.91  Aligned_cols=49  Identities=20%  Similarity=0.242  Sum_probs=32.1

Q ss_pred             HHHHHHHhhcCCCCeEEEEeccccccCCCCCChHHHHHHHHHHHHh-CCccEEEeCCcccceE
Q 024595          130 LKDVDGALKNSKAKWKIVVGHHTIKSAGHHGVTKELLLRLLPILEE-NNVDMYVNGHDHCLQH  191 (265)
Q Consensus       130 ~~wl~~~l~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~l~~~~~~-~~v~~vl~GH~H~~~~  191 (265)
                      ++...+.|++.....+|+++|.|...        +     ..+.++ .+|+++|+||+|....
T Consensus       195 ~~~~v~~l~~~~~d~iIvL~H~g~~~--------d-----~~la~~~~gvDlIlgGHtH~~~~  244 (552)
T 2z1a_A          195 AQKAVYELLAKGVNKIVVLSHLGYGE--------D-----LKLARRLVGVQVIVGGHSHTLLG  244 (552)
T ss_dssp             HHHHHHHHHHTTCCCEEEEEESCHHH--------H-----HHHHTTCSSCCEEEECSSCCCBS
T ss_pred             HHHHHHHHHhcCCCEEEEEeCCCcch--------H-----HHHHHhCCCccEEEeCCcCcccc
Confidence            44444445544567889999997531        1     123333 5799999999998764

>3qfk_A Uncharacterized protein; structural genomics, center for structural genomics of infec diseases, csgid, phosphoesterase, hydrolase; HET: MSE AKG; 2.05A {Staphylococcus aureus subsp}

Probab=97.97  E-value=1.2e-05  Score=71.61  Aligned_cols=64  Identities=17%  Similarity=0.281  Sum_probs=38.2

Q ss_pred             CCCeEEEEeccccccCCCCCC-------hHHHHHHHHHHHHhCCccEEEeCCcccceEEeeCCeEEEEeCCCC
Q 024595          141 KAKWKIVVGHHTIKSAGHHGV-------TKELLLRLLPILEENNVDMYVNGHDHCLQHISSNGIEFLTSGGGS  206 (265)
Q Consensus       141 ~~~~~iv~~H~P~~~~~~~~~-------~~~~~~~l~~~~~~~~v~~vl~GH~H~~~~~~~~~~~~i~~g~~~  206 (265)
                      +...+|+++|.+.......+.       ... ...+..-+ ..+|+++|+||+|.......+++..+.+|+-+
T Consensus       198 ~~D~iIvl~H~G~~~d~~~~~~~~~~~~e~~-~~~la~~~-~~giDlIlgGHtH~~~~~~v~~~~ivqag~~g  268 (527)
T 3qfk_A          198 HADIIVVCYHGGFEKDLESGTPTEVLTGENE-GYAMLEAF-SKDIDIFITGHQHRQIAERFKQTAVIQPGTRG  268 (527)
T ss_dssp             HCSEEEEEEECCCSBCTTTCCBSSCCSSSCC-HHHHHHHH-GGGCSEEECCSSCCEEEEEETTEEEEEECSTT
T ss_pred             CCCEEEEEeCcCcccccccCccccccccchH-HHHHHHhc-CCCCcEEEECCCCcccceEECCEEEeccChhh
Confidence            356788999987643321110       000 11222222 14799999999999886555777777666544

>3ive_A Nucleotidase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, nysgxrc; HET: CTN; 1.70A {Escherichia coli O6} PDB: 3ivd_A*

Probab=97.94  E-value=1.8e-05  Score=70.24  Aligned_cols=65  Identities=14%  Similarity=0.200  Sum_probs=32.9

Q ss_pred             HHhhcCCCCeEEEEeccccccCCCCCChHHH---HHHHHHHHHh-CCccEEEeCCcccceEE--eeCCeEEE
Q 024595          135 GALKNSKAKWKIVVGHHTIKSAGHHGVTKEL---LLRLLPILEE-NNVDMYVNGHDHCLQHI--SSNGIEFL  200 (265)
Q Consensus       135 ~~l~~~~~~~~iv~~H~P~~~~~~~~~~~~~---~~~l~~~~~~-~~v~~vl~GH~H~~~~~--~~~~~~~i  200 (265)
                      +.|++. ...+|+++|.+...........+.   .+.-..+.++ .+|+++|+||+|.....  ..+++..+
T Consensus       180 ~~Lk~~-~D~iIvl~H~G~~~~~~~~~~~~~~~~~~~d~~la~~~~giDlIlgGHtH~~~~~~~~~~~~~iv  250 (509)
T 3ive_A          180 DELKGK-VDLTVALIHEGVPARQSSMGGTDVRRALDKDIQTASQVKGLDILITGHAHVGTPEPIKVGNTLIL  250 (509)
T ss_dssp             HHHTTT-CSEEEEEEECSSCCCCCCC---CCCCCCHHHHHHHHHCSSCCEEEEESSCCCCSSCEEETTEEEE
T ss_pred             HHHHhc-CCEEEEEeccCcCCccccccccccccccchHHHHHhcCCCCcEEEeCCcCccCCCCeeeCCEEEE
Confidence            344433 667889999875322111100000   0111233444 37999999999975422  23555443

>4h2g_A 5'-nucleotidase; dimer, hydrolase, phosphatase, extracellular; HET: ADN; 1.55A {Homo sapiens} PDB: 4h2f_A* 4h1y_P* 4h2i_A* 4h1s_A* 4h2b_A*

Probab=97.55  E-value=5.3e-05  Score=67.79  Aligned_cols=41  Identities=27%  Similarity=0.417  Sum_probs=26.9

Q ss_pred             hhcCCCCeEEEEeccccccCCCCCChHHHHHHHHHHHHh-CCccEEEeCCcccce
Q 024595          137 LKNSKAKWKIVVGHHTIKSAGHHGVTKELLLRLLPILEE-NNVDMYVNGHDHCLQ  190 (265)
Q Consensus       137 l~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~l~~~~~~-~~v~~vl~GH~H~~~  190 (265)
                      |++.....+|+++|.+...        +  ..   +.++ .+|+++|+||+|...
T Consensus       204 l~~~g~D~iI~l~H~g~~~--------d--~~---la~~~~giDlIlgGHtH~~~  245 (546)
T 4h2g_A          204 LKTLNVNKIIALGHSGFEM--------D--KL---IAQKVRGVDVVVGGHSNTFL  245 (546)
T ss_dssp             HHHTTCCCEEEEEESCHHH--------H--HH---HHHHSTTCCEEECCSSCCCC
T ss_pred             HHhcCCCEEEEEeccCccc--------h--HH---HHHhCCCCcEEEeCCcCccc
Confidence            3333467789999986421        1  12   2333 379999999999865

>3c9f_A 5'-nucleotidase; 2',3'-cyclic phosphodiesterase, protein STR initiative, PSI-2, NEW YORK SGX research center for structu genomics, nysgxrc; 1.90A {Candida albicans} SCOP: d.114.1.1 d.159.1.2

Probab=97.49  E-value=0.00055  Score=61.23  Aligned_cols=68  Identities=25%  Similarity=0.256  Sum_probs=38.8

Q ss_pred             HHHHHHhhcCCCCeEEEEeccccccCCCCCChHHHHHHHHHHHHh--CCccE-EEeCCcccceEEee-CCeEEEEeCCC
Q 024595          131 KDVDGALKNSKAKWKIVVGHHTIKSAGHHGVTKELLLRLLPILEE--NNVDM-YVNGHDHCLQHISS-NGIEFLTSGGG  205 (265)
Q Consensus       131 ~wl~~~l~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~l~~~~~~--~~v~~-vl~GH~H~~~~~~~-~~~~~i~~g~~  205 (265)
                      +|+++.++ .+...+|+++|.+....   ..  +. ......+.+  .++++ +|+||+|....... +++..+.+|.-
T Consensus       188 ~~v~~l~~-~~~D~IIvL~H~G~~~~---~d--~~-~~~~~~lA~~~~giDilIlgGHtH~~~~~~~~~~t~ivqaG~~  259 (557)
T 3c9f_A          188 PWFQEALK-HEVDLIIIVGHTPISHN---WG--EF-YQVHQYLRQFFPDTIIQYFGGHSHIRDFTVFDSLSTGLQSGRY  259 (557)
T ss_dssp             HHHHHHTT-SCCSEEEEECSSCCCTT---TC--HH-HHHHHHHHHHCTTSEEEEEECSSCCEEEEEEETTEEEEEECST
T ss_pred             HHHHHHHh-cCCCEEEEecccCcccc---Cc--cc-cHHHHHHHHhCCCCCEEEECCCCCCCCcceecCCeEeeeccch
Confidence            36665553 35678899999976310   11  11 222222333  47995 99999999854333 55655544433

>3ztv_A NAD nucleotidase, NADN; hydrolase, NAD pyrophosphatase, NMN nucleotidase, periplasmi enzyme, CD73; HET: ADN; 1.30A {Haemophilus influenzae} PDB: 3zu0_A*

Probab=97.46  E-value=0.00075  Score=60.76  Aligned_cols=43  Identities=28%  Similarity=0.441  Sum_probs=27.6

Q ss_pred             HhhcCCCCeEEEEeccccccCCCCCChHHHHHHHHHHHHh-CCccEEEeCCcccceE
Q 024595          136 ALKNSKAKWKIVVGHHTIKSAGHHGVTKELLLRLLPILEE-NNVDMYVNGHDHCLQH  191 (265)
Q Consensus       136 ~l~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~l~~~~~~-~~v~~vl~GH~H~~~~  191 (265)
                      .|++.....+|+++|.+...        +  .   .+.++ .+|+++|+||+|....
T Consensus       189 ~lk~~g~d~iI~l~H~G~~~--------d--~---~la~~~~giDlIlgGHtH~~~~  232 (579)
T 3ztv_A          189 ALKQQGINKIILLSHAGSEK--------N--I---EIAQKVNDIDVIVTGDSHYLYG  232 (579)
T ss_dssp             HHHTTTCCCEEEEEETCHHH--------H--H---HHHHHCSSCCEEEECSSCCEEE
T ss_pred             HHHhCCCCEEEEEeccCchh--------h--H---HHHHhCCCCCEEEeCCCCcccc
Confidence            34433456788999985321        1  1   22333 3799999999999773

>1t71_A Phosphatase, conserved HYPO; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI; 2.10A {Mycoplasma pneumoniae M129} SCOP: d.159.1.9

Probab=97.23  E-value=0.0024  Score=51.74  Aligned_cols=59  Identities=17%  Similarity=0.164  Sum_probs=34.8

Q ss_pred             HHHHhhcCCCCeEEEEeccccccCCCCCChHHHHHHHHHHHHhCCccEEEeCCcccceEEee---CCeEEEE
Q 024595          133 VDGALKNSKAKWKIVVGHHTIKSAGHHGVTKELLLRLLPILEENNVDMYVNGHDHCLQHISS---NGIEFLT  201 (265)
Q Consensus       133 l~~~l~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~l~~~~~~~~v~~vl~GH~H~~~~~~~---~~~~~i~  201 (265)
                      +++.+++.+...+|+.+|.        +...+ ...+...+ ..+|++|+.||+|.......   +++.|++
T Consensus       141 a~~~v~~~~~diIIv~~H~--------g~t~E-k~~la~~~-dg~VD~VvGgHTHv~t~d~~il~~gt~~i~  202 (281)
T 1t71_A          141 LKELILKRDCDLHIVDFHA--------ETTSE-KNAFCMAF-DGYVTTIFGTHTHVPSADLRITPKGSAYIT  202 (281)
T ss_dssp             HHHHHTTCCCSEEEEEEEC--------SCHHH-HHHHHHHH-TTTSSEEEEESSSSCCTTCEECTTSCEEES
T ss_pred             HHHHHhhcCCCEEEEEeCC--------CchHH-HHHHHHhC-CCCeEEEEeCCCCcCCCceEEecCCcEEEe
Confidence            3333333345678888996        22222 12233322 24699999999999765332   7787876

>4h1s_A 5'-nucleotidase; hydrolase; HET: NAG; 2.20A {Homo sapiens}

Probab=96.91  E-value=0.0021  Score=57.26  Aligned_cols=45  Identities=24%  Similarity=0.332  Sum_probs=28.5

Q ss_pred             HHHHhhcCCCCeEEEEeccccccCCCCCChHHHHHHHHHHHHh-CCccEEEeCCcccce
Q 024595          133 VDGALKNSKAKWKIVVGHHTIKSAGHHGVTKELLLRLLPILEE-NNVDMYVNGHDHCLQ  190 (265)
Q Consensus       133 l~~~l~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~l~~~~~~-~~v~~vl~GH~H~~~  190 (265)
                      .-.+|++.....+|+++|.-+        ..+     ..+.++ .+|++++.||+|...
T Consensus       178 ~v~~Lr~~g~D~II~LsH~G~--------~~d-----~~la~~v~giD~IlgGHsH~~~  223 (530)
T 4h1s_A          178 EVDKLKTLNVNKIIALGHSGF--------EMD-----KLIAQKVRGVDVVVGGHSNTFL  223 (530)
T ss_dssp             HHHHHHHTTCCCEEEEEESCH--------HHH-----HHHHHHSTTCCEEECCSSCCCB
T ss_pred             HHhhhhhcCCCEEEEeccCCc--------hHH-----HHHHhcCCCCCeeccCCcccee
Confidence            334444445677899999732        111     123344 379999999999764

>2z06_A Putative uncharacterized protein TTHA0625; metal binding protein, structural genomics, NPPSFA; 2.20A {Thermus thermophilus} SCOP: d.159.1.10 PDB: 2cv9_A

Probab=96.30  E-value=0.1  Score=41.43  Aligned_cols=51  Identities=22%  Similarity=0.272  Sum_probs=31.5

Q ss_pred             CCeEEEEeccccccCCCCCChHHHHHHHHHHHHhCCccEEEeCCcccceEEe---eCCeEEEEe
Q 024595          142 AKWKIVVGHHTIKSAGHHGVTKELLLRLLPILEENNVDMYVNGHDHCLQHIS---SNGIEFLTS  202 (265)
Q Consensus       142 ~~~~iv~~H~P~~~~~~~~~~~~~~~~l~~~~~~~~v~~vl~GH~H~~~~~~---~~~~~~i~~  202 (265)
                      ...+|+.+|.        +...+ ...+...+ ..+|++|+.||+|......   .+++.|++.
T Consensus       137 ~d~IIv~~H~--------g~tse-k~~la~~~-dg~Vd~VvGgHTHv~t~d~~il~~gt~~itd  190 (252)
T 2z06_A          137 ADYVLVEVHA--------EATSE-KMALAHYL-DGRASAVLGTHTHVPTLDATRLPKGTLYQTD  190 (252)
T ss_dssp             CSEEEEEEEC--------SCHHH-HHHHHHHH-BTTBSEEEEESSCSCBSCCEECTTSCEEESC
T ss_pred             CCEEEEEeCC--------CcHHH-HHHHHHhC-CCCeEEEEcCCCCcCCCccEEcCCCcEeecC
Confidence            5678888997        22222 12222222 3469999999999976533   267777753

>1t70_A Phosphatase; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI, protein STR initiative; 2.30A {Deinococcus radiodurans} SCOP: d.159.1.9

Probab=96.24  E-value=0.075  Score=42.36  Aligned_cols=60  Identities=20%  Similarity=0.141  Sum_probs=35.3

Q ss_pred             HHHHhhcCCCCeEEEEeccccccCCCCCChHHHHHHHHHHHHhCCccEEEeCCcccceEEee---CCeEEEEe
Q 024595          133 VDGALKNSKAKWKIVVGHHTIKSAGHHGVTKELLLRLLPILEENNVDMYVNGHDHCLQHISS---NGIEFLTS  202 (265)
Q Consensus       133 l~~~l~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~l~~~~~~~~v~~vl~GH~H~~~~~~~---~~~~~i~~  202 (265)
                      +++.+++.+...+|+.+|.        +...+ ...+...+ ..+|++|+.||+|.......   +++.|++.
T Consensus       131 ~~~~v~~l~~d~IIv~~H~--------e~t~E-k~~la~~~-dg~vd~VvGgHTHv~~~d~~il~~gt~~i~d  193 (255)
T 1t70_A          131 MDALLERDDLGTVFVDFHA--------EATSE-KEAMGWHL-AGRVAAVIGTHTHVPTADTRILKGGTAYQTD  193 (255)
T ss_dssp             HHHHTTCSSCCEEEEEEEC--------SCHHH-HHHHHHHH-TTSSSEEEEESSCSCBSCCEEETTTEEEESC
T ss_pred             HHHHHHHhCCCEEEEEeCC--------CChHH-HHHHHHhC-CCCeEEEEeCCCCcCCCceEEcCCCeEEEEc
Confidence            3333333345577888995        22222 12233222 34699999999999865433   78888764

>2dfj_A Diadenosinetetraphosphatase; helices and strands mixture, hydrolase; 2.72A {Shigella flexneri 2A}

Probab=95.43  E-value=0.003  Score=51.42  Aligned_cols=43  Identities=28%  Similarity=0.271  Sum_probs=27.1

Q ss_pred             cCCCEEEecCCccCCCCCCCCCChhhhhhcccccCCCCCCCceEEcCCCcccC
Q 024595            8 LEIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQKQWYNVLGNHDYR   60 (265)
Q Consensus         8 ~~pd~vv~~GD~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~p~~~i~GNHD~~   60 (265)
                      .++|.+|++||++ +.|..   ..+.   +..+..   +..+++++.||||..
T Consensus        27 ~~~d~~v~lGD~v-drG~~---s~~~---l~~l~~---l~~~~~~v~GNHe~~   69 (280)
T 2dfj_A           27 PGKDTLWLTGDLV-ARGPG---SLDV---LRYVKS---LGDSVRLVLGNHDLH   69 (280)
T ss_dssp             TTTCEEEECSCCS-SSSSC---HHHH---HHHHHH---TGGGEEECCCHHHHH
T ss_pred             CCCCEEEEeCCcC-CCCCc---cHHH---HHHHHh---CCCceEEEECCCcHH
Confidence            4679999999999 34421   1222   222211   234899999999964

>2qjc_A Diadenosine tetraphosphatase, putative; putative diadenosine tetraphosphatase, monomer, PSI- 2, protein structure initiative, nysgrc; 2.05A {Trypanosoma brucei}

Probab=94.95  E-value=0.0049  Score=49.59  Aligned_cols=28  Identities=21%  Similarity=-0.041  Sum_probs=19.9

Q ss_pred             CccEEEeCCcccceEEeeC--CeEEEEeCC
Q 024595          177 NVDMYVNGHDHCLQHISSN--GIEFLTSGG  204 (265)
Q Consensus       177 ~v~~vl~GH~H~~~~~~~~--~~~~i~~g~  204 (265)
                      +.+.|+.||+|.......+  ++..+-+|+
T Consensus       196 g~~~vvfGHt~~~~~~~~~~~~~i~IDtG~  225 (262)
T 2qjc_A          196 GPETVVFGHDARRGLQEQYKPLAIGLDSRC  225 (262)
T ss_dssp             CSSEEEECCCGGGCCBCTTTTTEEECCCBG
T ss_pred             CCCEEEECCCccccccccCCCCEEEeeCcc
Confidence            4689999999997654445  666665544

>2z72_A Protein-tyrosine-phosphatase; cold-active enzyme, psychrophIle, hydrolase; 1.10A {Shewanella SP} PDB: 1v73_A 2zbm_A

Probab=93.77  E-value=0.012  Score=49.36  Aligned_cols=24  Identities=33%  Similarity=0.329  Sum_probs=19.0

Q ss_pred             HHHHHHHHhCCccEEEeCCcccce
Q 024595          167 LRLLPILEENNVDMYVNGHDHCLQ  190 (265)
Q Consensus       167 ~~l~~~~~~~~v~~vl~GH~H~~~  190 (265)
                      +.+..++..++.+.++.||+|...
T Consensus       268 ~~~~~fl~~~~~~~IV~GHt~~~~  291 (342)
T 2z72_A          268 AELDTILQHFNVNHIVVGHTSQER  291 (342)
T ss_dssp             HHHHHHHHHHTCSEEEECSSCCSS
T ss_pred             HHHHHHHHHCCCcEEEECCCcccc
Confidence            344566777789999999999875

>3gve_A YFKN protein; alpha-beta-BETA-alpha sandwich, structural genomics, PSI-2, structure initiative; HET: CIT; 1.25A {Bacillus subtilis subsp}

Probab=93.63  E-value=0.27  Score=40.98  Aligned_cols=51  Identities=22%  Similarity=0.415  Sum_probs=30.1

Q ss_pred             HhhcCCCCeEEEEeccccccCCCC-CChHHHHHHHHHHHHh-CCccEEEeCCcccce
Q 024595          136 ALKNSKAKWKIVVGHHTIKSAGHH-GVTKELLLRLLPILEE-NNVDMYVNGHDHCLQ  190 (265)
Q Consensus       136 ~l~~~~~~~~iv~~H~P~~~~~~~-~~~~~~~~~l~~~~~~-~~v~~vl~GH~H~~~  190 (265)
                      +|++.....+|+++|......... ....    ....+.++ .+|++++.||+|...
T Consensus       202 ~Lk~~g~D~II~l~H~G~~~d~~~~~~e~----~~~~lA~~v~giD~IigGHsH~~~  254 (341)
T 3gve_A          202 KMKAEGADVIIALAHTGIEKQAQSSGAEN----AVFDLATKTKGIDAIISGHQHGLF  254 (341)
T ss_dssp             HHHHTTCSEEEEEECCCCCSSCCCTTCSS----CHHHHHHHCSCCCEEEECSSCCEE
T ss_pred             HHHhcCCCEEEEEeccCccccccccccch----hHHHHHhcCCCCcEEEECCCCccC
Confidence            344445678899999876432211 1111    11223333 479999999999875

>2ie4_C PP2A-alpha;, serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform; protein-protein complex, heat repeat, signaling protein; HET: OKA; 2.60A {Homo sapiens} SCOP: d.159.1.3 PDB: 2npp_C* 3dw8_C* 3k7v_C* 3k7w_C* 3c5w_C 2ie3_C* 3fga_C* 2iae_C* 3p71_C* 2nym_C* 2nyl_C*

Probab=91.55  E-value=0.042  Score=45.18  Aligned_cols=26  Identities=8%  Similarity=0.029  Sum_probs=20.2

Q ss_pred             HHHHHHHHhCCccEEEeCCcccceEE
Q 024595          167 LRLLPILEENNVDMYVNGHDHCLQHI  192 (265)
Q Consensus       167 ~~l~~~~~~~~v~~vl~GH~H~~~~~  192 (265)
                      +.....++++++++++-||.-....+
T Consensus       223 ~~~~~fl~~n~l~~iir~Hq~~~~G~  248 (309)
T 2ie4_C          223 DISETFNHANGLTLVSRAHQLVMEGY  248 (309)
T ss_dssp             HHHHHHHHHTTCSEEEECCSCCTEEE
T ss_pred             HHHHHHHHHcCCeEEEecCcceeCCE
Confidence            44567888899999999998765443

>1fjm_A Protein serine/threonine phosphatase-1 (alpha ISO 1); hydrolase, toxin, hydrolase-hydrolase inhibitor complex; HET: 1ZN; 2.10A {Oryctolagus cuniculus} SCOP: d.159.1.3

Probab=90.34  E-value=0.081  Score=43.89  Aligned_cols=22  Identities=14%  Similarity=0.341  Sum_probs=16.9

Q ss_pred             HHHHHHhCCccEEEeCCcccce
Q 024595          169 LLPILEENNVDMYVNGHDHCLQ  190 (265)
Q Consensus       169 l~~~~~~~~v~~vl~GH~H~~~  190 (265)
                      ...++++.++++++-||.-...
T Consensus       232 ~~~fl~~~~l~liir~Hq~v~~  253 (330)
T 1fjm_A          232 VAKFLHKHDLDLICRAHQVVED  253 (330)
T ss_dssp             HHHHHHHHTCSEEEECCSCCTT
T ss_pred             HHHHHHhCCCceEecccccccC
Confidence            3456778899999999987654

>3e7a_A PP-1A, serine/threonine-protein phosphatase PP1-alpha Ca subunit; carbohydrate metabolism, cell cycle, cell division; HET: 1ZN; 1.63A {Homo sapiens} SCOP: d.159.1.3 PDB: 3e7b_A* 3egg_A* 3egh_A* 3hvq_A 3v4y_A* 3n5u_A 1jk7_A* 1it6_A* 2bcd_A* 2bdx_A* 2o8g_A 2o8a_A 1u32_A* 1s70_A*

Probab=89.44  E-value=0.086  Score=43.05  Aligned_cols=23  Identities=13%  Similarity=0.244  Sum_probs=18.9

Q ss_pred             HHHHHHHHhCCccEEEeCCcccc
Q 024595          167 LRLLPILEENNVDMYVNGHDHCL  189 (265)
Q Consensus       167 ~~l~~~~~~~~v~~vl~GH~H~~  189 (265)
                      +.....++++++++++-||.=..
T Consensus       229 ~~~~~fl~~n~l~~IiR~Hq~v~  251 (299)
T 3e7a_A          229 EVVAKFLHKHDLDLICRAHQVVE  251 (299)
T ss_dssp             HHHHHHHHHHTCSEEEECCSCCT
T ss_pred             HHHHHHHHHCCCeEEEEcCeeee
Confidence            55677888899999999999543

>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3

Probab=89.01  E-value=0.093  Score=45.86  Aligned_cols=28  Identities=25%  Similarity=0.259  Sum_probs=22.2

Q ss_pred             HHHHHHHHhCCccEEEeCCcccceEEee
Q 024595          167 LRLLPILEENNVDMYVNGHDHCLQHISS  194 (265)
Q Consensus       167 ~~l~~~~~~~~v~~vl~GH~H~~~~~~~  194 (265)
                      +....++++.++++++.||.+....+..
T Consensus       387 ~~~~~fl~~~~~~~iir~H~~~~~g~~~  414 (477)
T 1wao_1          387 DVTKAFLEENNLDYIIRSHEVKAEGYEV  414 (477)
T ss_dssp             HHHHHHHHHTTCCEEEECCSCCTEEEEE
T ss_pred             HHHHHHHHHcCCeEEEECCCCCcCCeEE
Confidence            4456788889999999999998765543

>3ll8_A Serine/threonine-protein phosphatase 2B catalytic alpha isoform; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 2p6b_A 1m63_A* 1tco_A* 1mf8_A* 2jog_A

Probab=88.41  E-value=0.11  Score=43.47  Aligned_cols=23  Identities=17%  Similarity=0.167  Sum_probs=18.7

Q ss_pred             HHHHHHHHhCCccEEEeCCcccc
Q 024595          167 LRLLPILEENNVDMYVNGHDHCL  189 (265)
Q Consensus       167 ~~l~~~~~~~~v~~vl~GH~H~~  189 (265)
                      +.....++++++++++-||.=..
T Consensus       250 ~~~~~Fl~~n~l~~IiRaHq~~~  272 (357)
T 3ll8_A          250 PAVCEFLQHNNLLSILRAHEAQD  272 (357)
T ss_dssp             HHHHHHHHHTTCSEEEECCSCCT
T ss_pred             HHHHHHHHHCCCeEEEEeccccc
Confidence            45567889999999999998543

>3icf_A PPT, serine/threonine-protein phosphatase T; IRO metalloprotein, structural genomics, PSI-2, protein structu initiative; 2.30A {Saccharomyces cerevisiae}

Probab=87.55  E-value=0.13  Score=42.68  Aligned_cols=27  Identities=11%  Similarity=0.086  Sum_probs=21.1

Q ss_pred             HHHHHHHHhCCccEEEeCCcccceEEe
Q 024595          167 LRLLPILEENNVDMYVNGHDHCLQHIS  193 (265)
Q Consensus       167 ~~l~~~~~~~~v~~vl~GH~H~~~~~~  193 (265)
                      +.....++++++++++-||.=....+.
T Consensus       238 ~~~~~fl~~n~l~~IiR~Hq~~~~Gy~  264 (335)
T 3icf_A          238 DITDRFLRNNKLRKIFRSHELRMGGVQ  264 (335)
T ss_dssp             HHHHHHHHHTTCSEEEECSSCCTEEEE
T ss_pred             HHHHHHHHHCCCeEEEEcCceecCeEE
Confidence            456778899999999999997654443

>3h63_A Serine/threonine-protein phosphatase 5; metalloenzyme, inhibitors, drug design, cytoplasm, hydrolase, iron, manganese, metal-binding, nucleus; HET: NHC; 1.30A {Homo sapiens} SCOP: d.159.1.3 PDB: 3h60_A* 3h61_A* 3h62_C* 3h64_A* 3h66_A 3h67_A* 3h68_A* 3h69_A* 1s95_A

Probab=87.49  E-value=0.14  Score=42.10  Aligned_cols=24  Identities=29%  Similarity=0.342  Sum_probs=19.1

Q ss_pred             HHHHHHHHhCCccEEEeCCcccce
Q 024595          167 LRLLPILEENNVDMYVNGHDHCLQ  190 (265)
Q Consensus       167 ~~l~~~~~~~~v~~vl~GH~H~~~  190 (265)
                      +.....++++++++++-||.=...
T Consensus       234 ~~~~~fl~~n~l~~iiR~Hq~~~~  257 (315)
T 3h63_A          234 DVTKAFLEENNLDYIIRSHEVKAE  257 (315)
T ss_dssp             HHHHHHHHHHTCSEEEECCSCCTT
T ss_pred             HHHHHHHHHcCCcEEEEeceeecC
Confidence            455678888999999999996543

>3jyf_A 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'- nucleotidase bifunctional periplasmic...; APC63187.2; HET: EPE TAM; 2.43A {Klebsiella pneumoniae subsp}

Probab=87.07  E-value=1.3  Score=36.69  Aligned_cols=50  Identities=20%  Similarity=0.289  Sum_probs=29.3

Q ss_pred             HhhcCCCCeEEEEeccccccCCCC-CChHHHHHHHHHHHHh-CCccEEEeCCcccce
Q 024595          136 ALKNSKAKWKIVVGHHTIKSAGHH-GVTKELLLRLLPILEE-NNVDMYVNGHDHCLQ  190 (265)
Q Consensus       136 ~l~~~~~~~~iv~~H~P~~~~~~~-~~~~~~~~~l~~~~~~-~~v~~vl~GH~H~~~  190 (265)
                      +|++.....+|+++|.-+...... .....  .   .++++ .+|++++.||+|...
T Consensus       196 ~lr~~g~D~II~l~H~G~~~d~~~~~~en~--~---~~~~~v~gID~IlgGHsH~~~  247 (339)
T 3jyf_A          196 EMRAKGADVVVVVAHSGLSADPYQAMAENS--V---YYLSQVPGVDAIMFGHAHAVF  247 (339)
T ss_dssp             HHHHTTCSEEEEEECCCCCCSCCCTTCSCC--H---HHHTTSTTCCEEEECSSCSEE
T ss_pred             HHHhcCCCEEEEEeccCccccccccccchh--H---HHHhhCCCCCEEEeCCCcccc
Confidence            444445678899999866322211 01001  1   12233 479999999999875

>1aui_A Calcineurin, serine/threonine phosphatase 2B; hydrolase, immunosuppression; 2.10A {Homo sapiens} SCOP: d.159.1.3

Probab=85.27  E-value=0.23  Score=43.56  Aligned_cols=24  Identities=17%  Similarity=0.158  Sum_probs=19.9

Q ss_pred             HHHHHHHHhCCccEEEeCCcccce
Q 024595          167 LRLLPILEENNVDMYVNGHDHCLQ  190 (265)
Q Consensus       167 ~~l~~~~~~~~v~~vl~GH~H~~~  190 (265)
                      +.+..+++++++++++-||.-...
T Consensus       263 d~v~~FL~~n~l~lIIRaHq~v~~  286 (521)
T 1aui_A          263 PAVCEFLQHNNLLSILRAHEAQDA  286 (521)
T ss_dssp             HHHHHHHHHTTCSEEEECCSCCTT
T ss_pred             HHHHHHHHHcCCcEEEEccchhcc
Confidence            456778999999999999997654

>3flo_A DNA polymerase alpha subunit B; protein-protein complex, phosphoesterase fold, OB fold, zinc motif, DNA replication, nucleus; HET: DNA; 2.50A {Saccharomyces cerevisiae}

Probab=80.09  E-value=0.98  Score=39.04  Aligned_cols=54  Identities=13%  Similarity=0.020  Sum_probs=31.3

Q ss_pred             cCCCEEEecCCccCCC------CCC----CC--CChhhhhhcccc----cCCCCCCCceEEcCCCcccCC
Q 024595            8 LEIDFVISTGDNFYED------GLT----GE--EDPAFLDSFTSI----YTAPSLQKQWYNVLGNHDYRG   61 (265)
Q Consensus         8 ~~pd~vv~~GD~~~~~------g~~----~~--~~~~~~~~~~~~----~~~~~l~~p~~~i~GNHD~~~   61 (265)
                      .+||++|++|..++..      |.-    ..  +...+.+.|+.+    ...-.-.+.+++|||+||...
T Consensus       179 ~kPdvLIL~GPFvD~~hp~i~~G~~p~~~~~~~~~~t~~~lF~~~i~~il~~l~~~t~VVlVPS~rD~~~  248 (460)
T 3flo_A          179 VKPHVLIMFGPFIDITHPLIASGKLPNFPQFKTQPKTLDELFLKLFTPILKTISPHIQTVLIPSTKDAIS  248 (460)
T ss_dssp             CCCSEEEEESCSSBTTCHHHHHTCCCCCTTCSSCCSSHHHHHHHHTHHHHTTSCTTSEEEEECCTTBTTC
T ss_pred             cCCCEEEEecCcccccCcccccCcccccccccccccCHHHHHHHHHHHHHHhccCCCEEEEeCCcccccC
Confidence            4899999999988433      210    00  012233333332    221123588999999999853

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	265
d1utea_	302	d.159.1.1 (A:) Mammalian purple acid phosphatase {	1e-41
d2qfra2	312	d.159.1.1 (A:121-432) Plant purple acid phosphatas	2e-15
d2nxfa1	320	d.159.1.12 (A:3-322) Uncharacterized C17orf48 homo	1e-08
d2hy1a1	256	d.159.1.11 (A:10-265) Rv0805 cyclic nucleotide pho	1e-05
d3d03a1	271	d.159.1.11 (A:1-271) Glycerophosphodiesterase GpdQ	5e-05

>d1utea_ d.159.1.1 (A:) Mammalian purple acid phosphatase {Pig (Sus scrofa) [TaxId: 9823]} Length = 302

class: Alpha and beta proteins (a+b)
fold: Metallo-dependent phosphatases
superfamily: Metallo-dependent phosphatases
family: Purple acid phosphatase-like
domain: Mammalian purple acid phosphatase
species: Pig (Sus scrofa) [TaxId: 9823]

 Score =  142 bits (358), Expect = 1e-41
 Identities = 73/272 (26%), Positives = 127/272 (46%), Gaps = 17/272 (6%)

Query: 1   MGLIGEKLEIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQK-QWYNVLGNHDY 59
           +    + L  DF++S GDNFY  G+   +D  F ++F  +++ PSL+   W+ + GNHD+
Sbjct: 33  IATTVKTLGADFILSLGDNFYFTGVHDAKDKRFQETFEDVFSDPSLRNVPWHVLAGNHDH 92

Query: 60  RGDVEAQLSPVLTRK----DSRWLCSRSFILDAEI-AEFVFVDTTPFVDEYFEDPGDSTY 114
            G+V AQ++     K     S +   R  I  + +      +DT        +       
Sbjct: 93  LGNVSAQIAYSKISKRWNFPSPYYRLRFKIPRSNVSVAIFMLDTVTLCGNSDDFVSQQPE 152

Query: 115 DWRGVYRRKEYLSDLLKDVDGALKNSKAKWKIVVGHHTIKSAGHHGVTKELLLRLLPILE 174
             R +   +  L+ + K     L  +K  + +V GH+ + S   HG T  L+ +LLP+L 
Sbjct: 153 RPRNLALARTQLAWIKKQ----LAAAKEDYVLVAGHYPVWSIAEHGPTHCLVKQLLPLLT 208

Query: 175 ENNVDMYVNGHDHCLQHISS-NGIEFLTSGGGSKAWRGDRNW--WSPEELKLYYDGQ--- 228
            + V  Y+ GHDH LQ++   NG+ F+ SG G+      ++        L+ ++  +   
Sbjct: 209 THKVTAYLCGHDHNLQYLQDENGLGFVLSGAGNFMDPSKKHLRKVPNGYLRFHFGAENSL 268

Query: 229 -GFMSVKMTRSEAVVLFYDVHGNILHKWSIPK 259
            GF  V++T  E  V + +  G  L K  +P+
Sbjct: 269 GGFAYVEITPKEMSVTYIEASGKSLFKTKLPR 300

>d2qfra2 d.159.1.1 (A:121-432) Plant purple acid phosphatase, catalytic domain {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 312

class: Alpha and beta proteins (a+b)
fold: Metallo-dependent phosphatases
superfamily: Metallo-dependent phosphatases
family: Purple acid phosphatase-like
domain: Plant purple acid phosphatase, catalytic domain
species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]

 Score = 72.2 bits (176), Expect = 2e-15
 Identities = 29/187 (15%), Positives = 58/187 (31%), Gaps = 12/187 (6%)

Query: 6   EKLEIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQKQWYNVLGNHDYRGDVEA 65
              +   V+  GD  Y D     ++  + D++          + W    GNH+     E 
Sbjct: 32  SPKKGQTVLFVGDLSYADRYPNHDNVRW-DTWGRFTERSVAYQPWIWTAGNHEIEFAPEI 90

Query: 66  QLSPVLTRKDSRWLCSRSFILDAEIAEFVFVDTTPFVDEYFEDPGDSTYDWRGVYRRKEY 125
             +        R+                F  +      +       +   RG  +    
Sbjct: 91  NETEPFKPFSYRYHVPYEASQSTS----PFWYSIKRASAHIIVLSSYSAYGRGTPQYTWL 146

Query: 126 LSDLLKDVDGALKNSKAKWKIVVGHHTIKSAGHHGV--TKELLLRLLPILEENNVDMYVN 183
             +L K     +K S+  W IV+ H  + ++ +H     + +  +      +  VD+   
Sbjct: 147 KKELRK-----VKRSETPWLIVLMHSPLYNSYNHHFMEGEAMRTKFEAWFVKYKVDVVFA 201

Query: 184 GHDHCLQ 190
           GH H  +
Sbjct: 202 GHVHAYE 208

>d2nxfa1 d.159.1.12 (A:3-322) Uncharacterized C17orf48 homolog zgc:64213 {Zebrafish (Danio rerio) [TaxId: 7955]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Metallo-dependent phosphatases
superfamily: Metallo-dependent phosphatases
family: ADPRibase-Mn-like
domain: Uncharacterized C17orf48 homolog zgc:64213
species: Zebrafish (Danio rerio) [TaxId: 7955]

 Score = 52.5 bits (124), Expect = 1e-08
 Identities = 31/240 (12%), Positives = 59/240 (24%), Gaps = 43/240 (17%)

Query: 6   EKLEIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQKQWYNVLGNHDYRGDVEA 65
            +  +  V+  GD         +     LD+  +     +     ++V GNH++      
Sbjct: 46  RRERVQCVVQLGDIIDGHNRRRDASDRALDTVMAEL--DACSVDVHHVWGNHEFYNFSRP 103

Query: 66  QLSPVLTRKDSRWLCSRSFILDAEIAEFVFVDTTPFVDEYFEDPGDST--YDWRGVYRRK 123
            L         R        L  +          P       D  D +         +  
Sbjct: 104 SLLSSRLNSAQRTGTDTGSDLIGDDIYAYEFSPAPNFRFVLLDAYDLSVIGREEESEKHT 163

Query: 124 EYLSDL----------------------------------LKDVDGALKNSKA--KWKIV 147
                L                                  L+ +D  L  S    +  ++
Sbjct: 164 HSWRILTQHNHNLQDLNLPPVSVGLEQRFVKFNGGFSEQQLQWLDAVLTLSDHKQERVLI 223

Query: 148 VGHHTIKSAGHHGVTKELLLR--LLPILEENNVDMYVNGHDHCLQHI-SSNGIEFLTSGG 204
             H  +       +         L  +    +V  ++ GHDH       S+G + +T  G
Sbjct: 224 FSHLPVHPCAADPICLAWNHEAVLSVLRSHQSVLCFIAGHDHDGGRCTDSSGAQHITLEG 283

>d2hy1a1 d.159.1.11 (A:10-265) Rv0805 cyclic nucleotide phosphodiesterase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 256

class: Alpha and beta proteins (a+b)
fold: Metallo-dependent phosphatases
superfamily: Metallo-dependent phosphatases
family: GpdQ-like
domain: Rv0805 cyclic nucleotide phosphodiesterase
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 42.9 bits (99), Expect = 1e-05
 Identities = 34/242 (14%), Positives = 59/242 (24%), Gaps = 36/242 (14%)

Query: 6   EKLEIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYT--APSLQKQWYNVLGNHDYRGDV 63
             L  D ++ TGD      L  + +PA       +    A  L  +   V+GNHD R ++
Sbjct: 42  SGLRPDAIVFTGD------LADKGEPAAYRKLRGLVEPFAAQLGAELVWVMGNHDDRAEL 95

Query: 64  EAQLSPVLTRKDSRWLCSRSFILDAEIAEFVFVDTTPFVDEYFEDPGDSTYDWRGVYRRK 123
                                       + V +     +           +      +  
Sbjct: 96  --------------RKFLLDEAPSMAPLDRVCMIDGLRIIVLDTSVPGHHHGEIRASQLG 141

Query: 124 EYLSDLLKDVDGALKNSKAKWKIVVGHHTIKSAGHHGVTKELLL---RLLPILEENNVDM 180
                        L        I+  HH    +         L     L  +L   +V  
Sbjct: 142 WLAE--------ELATPAPDGTILALHHPPIPSVLDMAVTVELRDQAALGRVLRGTDVRA 193

Query: 181 YVNGHDHCLQHISSNGIEFLTSGGGSKAWRGDRNWWSPEELKLYYDGQGFMSVKMTRSEA 240
            + GH H   + +  GI    +              +    +     QG   V +     
Sbjct: 194 ILAGHLHYSTNATFVGIPVSVASATCYTQDLT---VAAGGTRGRDGAQGCNLVHVYPDTV 250

Query: 241 VV 242
           V 
Sbjct: 251 VH 252

>d3d03a1 d.159.1.11 (A:1-271) Glycerophosphodiesterase GpdQ {Enterobacter aerogenes [TaxId: 548]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Metallo-dependent phosphatases
superfamily: Metallo-dependent phosphatases
family: GpdQ-like
domain: Glycerophosphodiesterase GpdQ
species: Enterobacter aerogenes [TaxId: 548]

 Score = 41.2 bits (95), Expect = 5e-05
 Identities = 29/206 (14%), Positives = 52/206 (25%), Gaps = 30/206 (14%)

Query: 3   LIGEKLEIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQKQWYNVLGNHDYRGD 62
           L   +   D V+ +GD      +     P        I  +       Y + GNHD +  
Sbjct: 35  LNALRERPDAVVVSGD------IVNCGRPEEYQVARQILGSL--NYPLYLIPGNHDDKAL 86

Query: 63  VEAQLSPVLTRKDSRWLCSRSFILDAEIAEFVFVDTTPFVDEYFEDPGDSTYDWRGVYRR 122
               L P+  +  S     R  + D          +     +                  
Sbjct: 87  FLEYLQPLCPQLGSDANNMRCAVDDFATRLLFIDSSRAGTSK------------------ 128

Query: 123 KEYLSDLLKDVDGALKNSKAKWKIVVGHHTIKSAGHHGVTKELLL----RLLPILEENNV 178
                + +  ++  L     K   +  HH     G+  +           L  +    ++
Sbjct: 129 GWLTDETISWLEAQLFEGGDKPATIFMHHPPLPLGNAQMDPIACENGHRLLALVERFPSL 188

Query: 179 DMYVNGHDHCLQHISSNGIEFLTSGG 204
                GH+H L           T  G
Sbjct: 189 TRIFCGHNHSLTMTQYRQALISTLPG 214

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	265
d1utea_	302	Mammalian purple acid phosphatase {Pig (Sus scrofa	100.0
d2qfra2	312	Plant purple acid phosphatase, catalytic domain {K	100.0
d2hy1a1	256	Rv0805 cyclic nucleotide phosphodiesterase {Mycoba	99.94
d3d03a1	271	Glycerophosphodiesterase GpdQ {Enterobacter aeroge	99.93
d2nxfa1	320	Uncharacterized C17orf48 homolog zgc:64213 {Zebraf	99.88
d1uf3a_	228	Hypothetical protein TT1561 {Thermus thermophilus	99.75
d2yvta1	257	Uncharacterized protein Aq_1956 {Aquifex aeolicus	99.73
d2a22a1	193	Vacuolar protein sorting 29, VPS29 {Cryptosporidiu	99.52
d1z2wa1	182	Vacuolar protein sorting 29, VPS29 {Mouse (Mus mus	99.5
d3ck2a1	173	Uncharacterized protein SP1879 {Streptococcus pneu	99.35
d1nnwa_	251	Hypothetical protein PF1291 {Archaeon Pyrococcus f	99.23
d1s3la_	165	Putative phosphodiesterase MJ0936 {Methanococcus j	99.21
d1ii7a_	333	Mre11 {Archaeon Pyrococcus furiosus [TaxId: 2261]}	99.2
d1su1a_	184	Phosphodiesterase yfcE {Escherichia coli [TaxId: 5	98.87
d1xm7a_	188	Hypothetical protein aq_1666 {Aquifex aeolicus [Ta	98.6
d1usha2	337	5'-nucleotidase (syn. UDP-sugar hydrolase), N-term	98.37
d3c9fa2	322	5'-nucleotidase (syn. UDP-sugar hydrolase), N-term	97.87
d2z1aa2	302	5'-nucleotidase (syn. UDP-sugar hydrolase), N-term	96.1
d1g5ba_	219	lambda ser/thr protein phosphatase {Bacteriophage	94.45
d1t70a_	255	Putative phosphatase DR1281 {Deinococcus radiodura	91.63
d1t71a_	281	Hypothetical protein MPN349 {Mycoplasma pneumoniae	91.59
d2z06a1	252	Hypothetical protein TTHA0625 {Thermus thermophilu	89.76

>d1utea_ d.159.1.1 (A:) Mammalian purple acid phosphatase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a+b)
fold: Metallo-dependent phosphatases
superfamily: Metallo-dependent phosphatases
family: Purple acid phosphatase-like
domain: Mammalian purple acid phosphatase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=100.00  E-value=8.6e-37  Score=252.75  Aligned_cols=253  Identities=26%  Similarity=0.427  Sum_probs=182.2

Q ss_pred             ccccccCCCEEEecCCccCCCCCCCCCChhhhhhcccccCC-CCCCCceEEcCCCcccCCCccccccccccccCCCceee
Q 024595            3 LIGEKLEIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTA-PSLQKQWYNVLGNHDYRGDVEAQLSPVLTRKDSRWLCS   81 (265)
Q Consensus         3 ~~~~~~~pd~vv~~GD~~~~~g~~~~~~~~~~~~~~~~~~~-~~l~~p~~~i~GNHD~~~~~~~~~~~~~~~~~~~~~~~   81 (265)
                      +.+++++|||||++||++|..|..+..+.+|.+.+..++.. ...++|+++++||||+..+......+  .....++..+
T Consensus        35 ~~~~~~~~dfvl~~GD~vy~~g~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD~~~~~~~~~~~--~~~~~~~~~~  112 (302)
T d1utea_          35 TTVKTLGADFILSLGDNFYFTGVHDAKDKRFQETFEDVFSDPSLRNVPWHVLAGNHDHLGNVSAQIAY--SKISKRWNFP  112 (302)
T ss_dssp             HHHHHHCCSEEEECSCCSTTTCCSSTTCTHHHHHTTTTSCSGGGTTCCEEECCCHHHHHSCHHHHHHG--GGTSTTEECC
T ss_pred             HHHhhCCCCEEEECCCCCCCCCCCcccHHHHHHHHHHHhhhhhhcCCceEEeecccccccccccccch--hhccccccCC
Confidence            45567899999999999998887776667777776655432 23479999999999987753322211  1122223222


Q ss_pred             e-eeE------ecCceEEEEEEeCccccccccCCCCCCCCCccccchhhhhHHHHHHHHHHHhhcCCCCeEEEEeccccc
Q 024595           82 R-SFI------LDAEIAEFVFVDTTPFVDEYFEDPGDSTYDWRGVYRRKEYLSDLLKDVDGALKNSKAKWKIVVGHHTIK  154 (265)
Q Consensus        82 ~-~y~------~~~~~~~~i~lds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~~wl~~~l~~~~~~~~iv~~H~P~~  154 (265)
                      . +|.      ...+.+.|+++|+..............    ........+.++|++||++.|++++++++|+++|||++
T Consensus       113 ~~~~~~~~~~~~~~~~~~~~~ldt~~~~~~~~~~~~~~----~~~~~~~~~~~~Q~~WL~~~L~~~~~~~~iv~~h~~~~  188 (302)
T d1utea_         113 SPYYRLRFKIPRSNVSVAIFMLDTVTLCGNSDDFVSQQ----PERPRNLALARTQLAWIKKQLAAAKEDYVLVAGHYPVW  188 (302)
T ss_dssp             SSSEEEEEECTTSSCEEEEEECCHHHHHCCGGGSTTCS----CCSCSCHHHHHHHHHHHHHHHHHCCCSEEEEECSSCSS
T ss_pred             CcccceeecccCCCCcEEEEEccceeEeeccccccccc----ccccccchhHHHHHHHHHHHHHhhccCceEEEEecccc
Confidence            1 122      234689999999986543221111000    01112345778999999999999999999999999999


Q ss_pred             cCCCCCChHHHHHHHHHHHHhCCccEEEeCCcccceEEee-CCeEEEEeCCCCCCCCCCCCC--CCCccceee----ecC
Q 024595          155 SAGHHGVTKELLLRLLPILEENNVDMYVNGHDHCLQHISS-NGIEFLTSGGGSKAWRGDRNW--WSPEELKLY----YDG  227 (265)
Q Consensus       155 ~~~~~~~~~~~~~~l~~~~~~~~v~~vl~GH~H~~~~~~~-~~~~~i~~g~~~~~~~~~~~~--~~~~~~~~~----~~~  227 (265)
                      +...++.....+..|.+++++++|++|||||.|.+++... .++.|+++|+|+...+.....  .......+.    ...
T Consensus       189 ~~~~~~~~~~~~~~~~~ll~~~~v~~~~~GH~H~~~r~~~~~~~~~i~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (302)
T d1utea_         189 SIAEHGPTHCLVKQLLPLLTTHKVTAYLCGHDHNLQYLQDENGLGFVLSGAGNFMDPSKKHLRKVPNGYLRFHFGAENSL  268 (302)
T ss_dssp             CCSSSCCCHHHHHHTHHHHHHTTCSEEEECSSSSEEEEECTTCCEEEEECBSSCCCCCCTTGGGSCTTCEEEEECCTTSC
T ss_pred             ccCCCCCchhhhhhhhHHHHhcCceEEEeCCCcceEEEecCCccEEEEeCCCCCCCCCccccccCCCcccceeecccCCc
Confidence            8877777777788999999999999999999999987766 788999999888765432211  111112221    246


Q ss_pred             CCeEEEEEeCCeEEEEEEecCCCeEEEEEccCCC
Q 024595          228 QGFMSVKMTRSEAVVLFYDVHGNILHKWSIPKEP  261 (265)
Q Consensus       228 ~gy~~~~v~~~~i~~~~~~~~g~~~~~~~i~~~~  261 (265)
                      .||++++|+++++++++++.+|+++++.+|++|.
T Consensus       269 ~gf~~~~v~~~~l~~~~~~~~G~~~~~~~~~~~~  302 (302)
T d1utea_         269 GGFAYVEITPKEMSVTYIEASGKSLFKTKLPRRA  302 (302)
T ss_dssp             CEEEEEEECSSCEEEEEEETTSCEEEEEEECCCC
T ss_pred             ceEEEEEEECCEEEEEEEeCCCCEEEEEEecCCC
Confidence            7999999999999999999999999999999884

>d2qfra2 d.159.1.1 (A:121-432) Plant purple acid phosphatase, catalytic domain {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}

class: Alpha and beta proteins (a+b)
fold: Metallo-dependent phosphatases
superfamily: Metallo-dependent phosphatases
family: Purple acid phosphatase-like
domain: Plant purple acid phosphatase, catalytic domain
species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]

Probab=100.00  E-value=1.3e-33  Score=234.57  Aligned_cols=234  Identities=14%  Similarity=0.130  Sum_probs=159.0

Q ss_pred             ccccCCCEEEecCCccCCCCCCCCCChhhhhhcccccCCCCCCCceEEcCCCcccCCCccc----ccccc-----ccccC
Q 024595            5 GEKLEIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQKQWYNVLGNHDYRGDVEA----QLSPV-----LTRKD   75 (265)
Q Consensus         5 ~~~~~pd~vv~~GD~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~p~~~i~GNHD~~~~~~~----~~~~~-----~~~~~   75 (265)
                      +...+|||||++||++|.+|.......+|.+.++.+ ......+|+++++||||+......    .+...     .+...
T Consensus        31 ~~~~~pdfvl~~GDl~Y~~~~~~~~~~~wd~~~~~~-~~~~~~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~  109 (312)
T d2qfra2          31 LSPKKGQTVLFVGDLSYADRYPNHDNVRWDTWGRFT-ERSVAYQPWIWTAGNHEIEFAPEINETEPFKPFSYRYHVPYEA  109 (312)
T ss_dssp             HCSSCCSEEEECSCCCCGGGSGGGCTHHHHHHHHHH-HHHHTTSCEEECCCGGGTCCBGGGTBCSTTHHHHHHCCCCGGG
T ss_pred             HcCCCCCEEEECCCCCcCCCCcccchHHHHHHHHHH-HHHhhcceEEEecccccccccccccccccccchhhhccCCccc
Confidence            345689999999999987775444444554433222 111235899999999997432111    01000     00100


Q ss_pred             CCceeeeeeEecCceEEEEEEeCccccccccCCCCCCCCCccccchhhhhHHHHHHHHHHHhhcC---CCCeEEEEeccc
Q 024595           76 SRWLCSRSFILDAEIAEFVFVDTTPFVDEYFEDPGDSTYDWRGVYRRKEYLSDLLKDVDGALKNS---KAKWKIVVGHHT  152 (265)
Q Consensus        76 ~~~~~~~~y~~~~~~~~~i~lds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~~wl~~~l~~~---~~~~~iv~~H~P  152 (265)
                      .....+.+|+|+.++++||+||+.....                     ...+|++||++.|++.   +.+|+||++|+|
T Consensus       110 ~~~~~~~~Ysf~~g~v~fi~Lds~~~~~---------------------~~~~Q~~WL~~~L~~~~~~~~~w~iv~~H~P  168 (312)
T d2qfra2         110 SQSTSPFWYSIKRASAHIIVLSSYSAYG---------------------RGTPQYTWLKKELRKVKRSETPWLIVLMHSP  168 (312)
T ss_dssp             GTCSSTTSEEEEETTEEEEECCTTSCCS---------------------TTSHHHHHHHHHHHTCCTTTCCEEEEECSSC
T ss_pred             cCCCCCceEEEEECCEEEEEeecccccc---------------------chHHHHHHHHHHHHHHhhcCCCEEEEEcccc
Confidence            0001123588999999999999864210                     1237999999999873   456899999999


Q ss_pred             cccCCCCC--ChHHHHHHHHHHHHhCCccEEEeCCcccceEEee-------------------CCeEEEEeCCCCCCCCC
Q 024595          153 IKSAGHHG--VTKELLLRLLPILEENNVDMYVNGHDHCLQHISS-------------------NGIEFLTSGGGSKAWRG  211 (265)
Q Consensus       153 ~~~~~~~~--~~~~~~~~l~~~~~~~~v~~vl~GH~H~~~~~~~-------------------~~~~~i~~g~~~~~~~~  211 (265)
                      +++...+.  ....+++.|.+++.+++|++||+||.|.+++..+                   .++.||++|+||.....
T Consensus       169 ~y~~~~~~~~~~~~~r~~l~~l~~~~~Vdlv~~GH~H~YeRt~p~~~~~~~~~~~~~~~~~~~~g~vyiv~G~gG~~~~~  248 (312)
T d2qfra2         169 LYNSYNHHFMEGEAMRTKFEAWFVKYKVDVVFAGHVHAYERSERVSNIAYKITNGLCTPVKDQSAPVYITIGDAGNYGVI  248 (312)
T ss_dssp             SSCCBSTTTTTTHHHHHHHHHHHHHTTCSEEEECSSSSEEEECSEECCCCCSSSCCCSCEECTTSCEEEEECCSCTTSCC
T ss_pred             ccccCCCCcccchhHHHHHHHHHHHcCcEEEEEccCcceEEEeeccCCcccccCCccccccCCCcCEEEEECcCCCcccc
Confidence            99765432  2345678899999999999999999999998642                   46789999999853221


Q ss_pred             CCC--CCCCccceeeecCCCeEEEEEeC-CeEEEEEEe-cCCCeE--EEEEccCC
Q 024595          212 DRN--WWSPEELKLYYDGQGFMSVKMTR-SEAVVLFYD-VHGNIL--HKWSIPKE  260 (265)
Q Consensus       212 ~~~--~~~~~~~~~~~~~~gy~~~~v~~-~~i~~~~~~-~~g~~~--~~~~i~~~  260 (265)
                      ...  ...+....+....+||.+|++.+ ..+.++++. .+|+++  +++.|.|+
T Consensus       249 ~~~~~~~~~~~s~~~~~~~G~~~l~v~n~t~l~~~~~~~~d~~~~~~D~~~i~~~  303 (312)
T d2qfra2         249 DSNMIQPQPEYSAFREASFGHGMFDIKNRTHAHFSWNRNQDGVAVEADSVWFFNR  303 (312)
T ss_dssp             CCCBCSSCCTTEEEEECCCEEEEEEECSSSEEEEEEEESSSCTTCCSEEEEEECT
T ss_pred             cccccCCCCCeeEEEecCCCEEEEEEEcCCeEEEEEEECCCCCEEeeeEEEEEeC
Confidence            111  01122334555789999999964 579999985 889887  99999987

>d2hy1a1 d.159.1.11 (A:10-265) Rv0805 cyclic nucleotide phosphodiesterase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Metallo-dependent phosphatases
superfamily: Metallo-dependent phosphatases
family: GpdQ-like
domain: Rv0805 cyclic nucleotide phosphodiesterase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.94  E-value=5.3e-27  Score=189.55  Aligned_cols=207  Identities=18%  Similarity=0.133  Sum_probs=127.8

Q ss_pred             cCCCEEEecCCccCCCCCCCCCChhhhhhcccccC--CCCCCCceEEcCCCcccCCCccccccccccccCCCceeeeeeE
Q 024595            8 LEIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYT--APSLQKQWYNVLGNHDYRGDVEAQLSPVLTRKDSRWLCSRSFI   85 (265)
Q Consensus         8 ~~pd~vv~~GD~~~~~g~~~~~~~~~~~~~~~~~~--~~~l~~p~~~i~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~y~   85 (265)
                      .+|||||++||++ ..|..    .++. .+..++.  ...+++|+++++||||........+.   ... . ...+..+.
T Consensus        44 ~~pD~vl~~GDl~-~~g~~----~~~~-~~~~~l~~~~~~~~~p~~~v~GNHD~~~~~~~~~~---~~~-~-~~~~~~~~  112 (256)
T d2hy1a1          44 LRPDAIVFTGDLA-DKGEP----AAYR-KLRGLVEPFAAQLGAELVWVMGNHDDRAELRKFLL---DEA-P-SMAPLDRV  112 (256)
T ss_dssp             CCCSEEEECSCCB-SSCCH----HHHH-HHHHHHHHHHHHHTCEEEECCCTTSCHHHHHHHTT---CCC-C-CCSCCCEE
T ss_pred             CCCCEEEECCCCC-CCCCh----hHHH-HHHHHhhhhhhhcCCCEEEEcccccchhhhhhhhc---ccc-c-cccccceE
Confidence            5899999999999 34421    1222 1222111  12357899999999995432222111   110 0 11123355


Q ss_pred             ecCceEEEEEEeCccccccccCCCCCCCCCccccchhhhhHHHHHHHHHHHhhcCCCCeEEEEeccccccCCCC---CCh
Q 024595           86 LDAEIAEFVFVDTTPFVDEYFEDPGDSTYDWRGVYRRKEYLSDLLKDVDGALKNSKAKWKIVVGHHTIKSAGHH---GVT  162 (265)
Q Consensus        86 ~~~~~~~~i~lds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~~wl~~~l~~~~~~~~iv~~H~P~~~~~~~---~~~  162 (265)
                      +..++++|++|||......                 ...+.++|++||++.|++...+++||++|||++.....   ...
T Consensus       113 ~~~~~~~~~~ldt~~~~~~-----------------~g~~~~~~~~wl~~~L~~~~~~~~iv~~Hhpp~~~~~~~~~~~~  175 (256)
T d2hy1a1         113 CMIDGLRIIVLDTSVPGHH-----------------HGEIRASQLGWLAEELATPAPDGTILALHHPPIPSVLDMAVTVE  175 (256)
T ss_dssp             EEETTEEEEECCCBCTTCS-----------------SBCCCHHHHHHHHHHHTSCCTTCEEEECSSCSSCCSSHHHHTTS
T ss_pred             EEecccceeeeeeeecCCc-----------------CCcccHHHHHHHHHHHHhhhccCceeeeecCCcccccccccccc
Confidence            6668899999999753210                 01234689999999999887788999999998765321   110


Q ss_pred             HHHHHHHHHHHHhCCccEEEeCCcccceEEeeCCeEEEEeCCCCCCCCCCCCCCCCccceeeecCCCeEEEEEeCCeEEE
Q 024595          163 KELLLRLLPILEENNVDMYVNGHDHCLQHISSNGIEFLTSGGGSKAWRGDRNWWSPEELKLYYDGQGFMSVKMTRSEAVV  242 (265)
Q Consensus       163 ~~~~~~l~~~~~~~~v~~vl~GH~H~~~~~~~~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~gy~~~~v~~~~i~~  242 (265)
                      ....+.+..++++++|++++|||.|........|+.++++++.+.......   ............||.+++++++.+..
T Consensus       176 ~~~~~~~~~i~~~~~v~~~~~GH~H~~~~~~~~gi~~~~~~s~~~~~~~~~---~~~~~~~~~~~~g~~lv~v~~d~~~~  252 (256)
T d2hy1a1         176 LRDQAALGRVLRGTDVRAILAGHLHYSTNATFVGIPVSVASATCYTQDLTV---AAGGTRGRDGAQGCNLVHVYPDTVVH  252 (256)
T ss_dssp             BCCHHHHHHHHTTSSEEEEEECSSSSCEEEEETTEEEEECCCCC----------------------CEEEEEECSSCEEE
T ss_pred             cccHHHHHHHHhccCceEEEccccchhhceEECCEEEEEcCCccccccccC---CCCCcccccCCCCEEEEEEECCCEEE
Confidence            112356788999999999999999998888889999999887655432221   12222233467899999999998777


Q ss_pred             EEE
Q 024595          243 LFY  245 (265)
Q Consensus       243 ~~~  245 (265)
                      ..+
T Consensus       253 ~~i  255 (256)
T d2hy1a1         253 SVI  255 (256)
T ss_dssp             EEE
T ss_pred             EeC
Confidence            653

>d3d03a1 d.159.1.11 (A:1-271) Glycerophosphodiesterase GpdQ {Enterobacter aerogenes [TaxId: 548]}

class: Alpha and beta proteins (a+b)
fold: Metallo-dependent phosphatases
superfamily: Metallo-dependent phosphatases
family: GpdQ-like
domain: Glycerophosphodiesterase GpdQ
species: Enterobacter aerogenes [TaxId: 548]

Probab=99.93  E-value=1.9e-25  Score=181.84  Aligned_cols=210  Identities=17%  Similarity=0.132  Sum_probs=138.6

Q ss_pred             cCCCEEEecCCccCCCCCCCCCChhhhhhcccccCCCCCCCceEEcCCCcccCCCccccccccccccCCCceeeeeeEec
Q 024595            8 LEIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQKQWYNVLGNHDYRGDVEAQLSPVLTRKDSRWLCSRSFILD   87 (265)
Q Consensus         8 ~~pd~vv~~GD~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~p~~~i~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~y~~~   87 (265)
                      .+||+||++||+++ .|.    ..++ +.+.+++  ..+++|+++++||||........+........... ....|.+.
T Consensus        40 ~~~D~vv~~GDl~~-~~~----~~~y-~~~~~~l--~~l~~p~~~i~GNHD~~~~~~~~~~~~~~~~~~~~-~~~~~~~~  110 (271)
T d3d03a1          40 ERPDAVVVSGDIVN-CGR----PEEY-QVARQIL--GSLNYPLYLIPGNHDDKALFLEYLQPLCPQLGSDA-NNMRCAVD  110 (271)
T ss_dssp             SCCSEEEEESCCBS-SCC----HHHH-HHHHHHH--TTCSSCEEEECCTTSCHHHHHHHHGGGSGGGCSCG-GGCCEEEC
T ss_pred             CCCCEEEECcccCc-CCc----chhH-HHHHHHH--hccCCCEEEEecCccchHHHHHHhhhhhhcccccc-CcceEEEe
Confidence            58999999999994 331    1233 2333333  24689999999999975433222222111111100 11346677


Q ss_pred             CceEEEEEEeCccccccccCCCCCCCCCccccchhhhhHHHHHHHHHHHhhcCCCCeEEEEeccccccCCCCCCh---HH
Q 024595           88 AEIAEFVFVDTTPFVDEYFEDPGDSTYDWRGVYRRKEYLSDLLKDVDGALKNSKAKWKIVVGHHTIKSAGHHGVT---KE  164 (265)
Q Consensus        88 ~~~~~~i~lds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~~wl~~~l~~~~~~~~iv~~H~P~~~~~~~~~~---~~  164 (265)
                      .+++++++|||......                 ...+.++|++||++.|++...++++|++|||++........   ..
T Consensus       111 ~~~~~~i~ldt~~~~~~-----------------~~~l~~~ql~wL~~~L~~~~~~~~iv~~Hh~p~~~~~~~~d~~~~~  173 (271)
T d3d03a1         111 DFATRLLFIDSSRAGTS-----------------KGWLTDETISWLEAQLFEGGDKPATIFMHHPPLPLGNAQMDPIACE  173 (271)
T ss_dssp             SSSSEEEECCCCCTTCS-----------------SBCCCHHHHHHHHHHHHHHTTSCEEEEESSCSSCCSCTTTGGGSBT
T ss_pred             cCCeEEEecccccCCCC-----------------cceecHHHHHHHHHHHhhhccceeEEEeccCccccCcccccccccc
Confidence            78899999999753210                 12245799999999999877788999999998765432211   11


Q ss_pred             HHHHHHHHHHhC-CccEEEeCCcccceEEeeCCeEEEEeCCCCCCCCCCCCCCCCccceeeecCCCeEEEEEeCCeEEEE
Q 024595          165 LLLRLLPILEEN-NVDMYVNGHDHCLQHISSNGIEFLTSGGGSKAWRGDRNWWSPEELKLYYDGQGFMSVKMTRSEAVVL  243 (265)
Q Consensus       165 ~~~~l~~~~~~~-~v~~vl~GH~H~~~~~~~~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~gy~~~~v~~~~i~~~  243 (265)
                      ..+++.++++++ +|+++||||.|.......+|+.++++++.+...+....   .....+.....||.+....+..+...
T Consensus       174 ~~~~l~~~l~~~~~v~~vl~GH~H~~~~~~~~g~~~~~~pst~~~~~~~~~---~~~~~~~~~p~~~~~~~~~~~~~~~~  250 (271)
T d3d03a1         174 NGHRLLALVERFPSLTRIFCGHNHSLTMTQYRQALISTLPGTVHQVPYCHA---DTDPYYDLSPASCLMHRQVGEQWVSY  250 (271)
T ss_dssp             TTHHHHHHHHHCTTEEEEEECSSSSCEEEEETTEEEEECCCSSCBCCCCSS---CCSCEEBCCCCEEEEEEEETTEEEEE
T ss_pred             chHHHHHHHHhcCCeEEEEeCCcchhhceEECCEEEEEcCCceeecccCCC---CCCcccccCCCEEEEEEEeCCCEEEE
Confidence            235788899997 69999999999999988999999988887765432211   11112333567999988888876665


Q ss_pred             EEe
Q 024595          244 FYD  246 (265)
Q Consensus       244 ~~~  246 (265)
                      ...
T Consensus       251 ~~~  253 (271)
T d3d03a1         251 QHS  253 (271)
T ss_dssp             EEE
T ss_pred             EEe
Confidence            543

>d2nxfa1 d.159.1.12 (A:3-322) Uncharacterized C17orf48 homolog zgc:64213 {Zebrafish (Danio rerio) [TaxId: 7955]}

class: Alpha and beta proteins (a+b)
fold: Metallo-dependent phosphatases
superfamily: Metallo-dependent phosphatases
family: ADPRibase-Mn-like
domain: Uncharacterized C17orf48 homolog zgc:64213
species: Zebrafish (Danio rerio) [TaxId: 7955]

Probab=99.88  E-value=3.3e-23  Score=170.56  Aligned_cols=224  Identities=17%  Similarity=0.117  Sum_probs=130.2

Q ss_pred             ccccCCCEEEecCCccCCCCCCCCCC-hhhhhhcccccCCCCCCCceEEcCCCcccCCCccccccccccccCCCce----
Q 024595            5 GEKLEIDFVISTGDNFYEDGLTGEED-PAFLDSFTSIYTAPSLQKQWYNVLGNHDYRGDVEAQLSPVLTRKDSRWL----   79 (265)
Q Consensus         5 ~~~~~pd~vv~~GD~~~~~g~~~~~~-~~~~~~~~~~~~~~~l~~p~~~i~GNHD~~~~~~~~~~~~~~~~~~~~~----   79 (265)
                      +++++|||||++||++.... ..... .+..+.+...+  ..+++|+++++||||..................++.    
T Consensus        45 i~~~~~DfVv~~GDl~~~~~-~~~~~~~~~~~~~~~~~--~~~~~p~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~  121 (320)
T d2nxfa1          45 WRRERVQCVVQLGDIIDGHN-RRRDASDRALDTVMAEL--DACSVDVHHVWGNHEFYNFSRPSLLSSRLNSAQRTGTDTG  121 (320)
T ss_dssp             HHHTTCSEEEECSCCBCTHH-HHTTCHHHHHHHHHHHH--HTTCSEEEECCCHHHHHHCCHHHHHTSTTCCCC------C
T ss_pred             HhhCCCCEEEECCCCCCCCC-cchhHHHHHHHHHHHHH--HHcCCCEEEecccCccccccchhcccccccchhhhccccc
Confidence            34679999999999993211 11010 11111111111  246899999999999764321111000000000000    


Q ss_pred             -----e--eeeeEecCceEEEEEEeCccccccccC---------------------CCCCCCCCcc----ccchhhhhHH
Q 024595           80 -----C--SRSFILDAEIAEFVFVDTTPFVDEYFE---------------------DPGDSTYDWR----GVYRRKEYLS  127 (265)
Q Consensus        80 -----~--~~~y~~~~~~~~~i~lds~~~~~~~~~---------------------~~~~~~~~~~----~~~~~~~~~~  127 (265)
                           .  ...+....++++++.+|+.........                     ..........    .......+.+
T Consensus       122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  201 (320)
T d2nxfa1         122 SDLIGDDIYAYEFSPAPNFRFVLLDAYDLSVIGREEESEKHTHSWRILTQHNHNLQDLNLPPVSVGLEQRFVKFNGGFSE  201 (320)
T ss_dssp             EECGGGTCCCEEEEEETTEEEEECCTTSBCSSSSCTTSHHHHHHHHHHHHHCCCTTCTTSCSCSSSGGGGCSTTCCBCCH
T ss_pred             ccccCCCCccceeecCCCeEEEEecCcccccccccccccccccccceeeecccccceecccccccccccccccccccccH
Confidence                 0  012234457789999988653210000                     0000000000    0011123468


Q ss_pred             HHHHHHHHHhhcC--CCCeEEEEeccccccCCCCCCh-HHHHHHHHHHHHhC-CccEEEeCCcccceEEe-eCCeEEEEe
Q 024595          128 DLLKDVDGALKNS--KAKWKIVVGHHTIKSAGHHGVT-KELLLRLLPILEEN-NVDMYVNGHDHCLQHIS-SNGIEFLTS  202 (265)
Q Consensus       128 ~Q~~wl~~~l~~~--~~~~~iv~~H~P~~~~~~~~~~-~~~~~~l~~~~~~~-~v~~vl~GH~H~~~~~~-~~~~~~i~~  202 (265)
                      +|++||++.|+++  +.+++|+++|+|+......... ....+++..+|.++ +|++||+||+|...... .++++++++
T Consensus       202 ~Ql~WL~~~L~~~~~~~~~viv~~H~p~~~~~~~~~~~~~~~~~~~~~l~~~~~V~~v~~GH~H~~~~~~~~~g~~~i~~  281 (320)
T d2nxfa1         202 QQLQWLDAVLTLSDHKQERVLIFSHLPVHPCAADPICLAWNHEAVLSVLRSHQSVLCFIAGHDHDGGRCTDSSGAQHITL  281 (320)
T ss_dssp             HHHHHHHHHHHHHHHHTCEEEEEESSCCCTTSSCGGGSCTTHHHHHHHHHTCTTEEEEEECSCTTCEEEECTTSCEEEEC
T ss_pred             HHHHHHHHHHHhhhhcCCceEEEECCCCccCCCCCccchhhHHHHHHHHHhCCCeeEEEeCCcCCcCeeeccCCCEEEEC
Confidence            9999999999864  4578899999998765432211 11246688899988 59999999999987655 489999987


Q ss_pred             CCCCCCCCCCCCCCCCccceeeecCCCeEEEEEeCCeEEEEEEe
Q 024595          203 GGGSKAWRGDRNWWSPEELKLYYDGQGFMSVKMTRSEAVVLFYD  246 (265)
Q Consensus       203 g~~~~~~~~~~~~~~~~~~~~~~~~~gy~~~~v~~~~i~~~~~~  246 (265)
                      ++.....               ....+|.+++|.++++.++-+.
T Consensus       282 ~~~~~~~---------------~~~~~~~~~~v~~d~~~~~~~~  310 (320)
T d2nxfa1         282 EGVIETP---------------PHSHAFATAYLYEDRMVMKGRG  310 (320)
T ss_dssp             CCGGGCC---------------TTSCEEEEEEECSSEEEEEEEE
T ss_pred             CeeecCC---------------CCCCCEEEEEEECCEEEEEEec
Confidence            6542211               2456999999999999998875

>d1uf3a_ d.159.1.6 (A:) Hypothetical protein TT1561 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a+b)
fold: Metallo-dependent phosphatases
superfamily: Metallo-dependent phosphatases
family: TT1561-like
domain: Hypothetical protein TT1561
species: Thermus thermophilus [TaxId: 274]

Probab=99.75  E-value=2e-18  Score=135.62  Aligned_cols=198  Identities=9%  Similarity=-0.071  Sum_probs=115.4

Q ss_pred             ccccccCCCEEEecCCccCCCCCCCCCChhhhhhcccccCCCCCCCceEEcCCCcccCCCccccccccccccCCCce-ee
Q 024595            3 LIGEKLEIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQKQWYNVLGNHDYRGDVEAQLSPVLTRKDSRWL-CS   81 (265)
Q Consensus         3 ~~~~~~~pd~vv~~GD~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~p~~~i~GNHD~~~~~~~~~~~~~~~~~~~~~-~~   81 (265)
                      +.+.+.++|+||++||++ +.|..   ..++...+.. +  ..+++|+++|+||||..................... ..
T Consensus        26 ~~~~~~~~D~vv~~GDl~-~~~~~---~~~~~~~~~~-L--~~~~~pv~~i~GNHD~~~~~~~~~~~~~~~~~~~~~~~~   98 (228)
T d1uf3a_          26 KLAPDTGADAIALIGNLM-PKAAK---SRDYAAFFRI-L--SEAHLPTAYVPGPQDAPIWEYLREAANVELVHPEMRNVH   98 (228)
T ss_dssp             THHHHHTCSEEEEESCSS-CTTCC---HHHHHHHHHH-H--GGGCSCEEEECCTTSCSHHHHHHHHHHHHHHCTTEEECB
T ss_pred             HHHhhcCCCEEEECCCCC-CCCcc---chHHHHhhhh-h--ccccceEEEEecCCCchhhhhhhhhcccccccccccccc
Confidence            345667999999999999 33311   1233222222 2  246789999999999643110000000000000000 01


Q ss_pred             eeeEecCceEEEEEEeCccccccccCCCCCCCCCccccchhhhhHHHHHHHHHHHhhcCCCCeEEEEeccccccCCC-CC
Q 024595           82 RSFILDAEIAEFVFVDTTPFVDEYFEDPGDSTYDWRGVYRRKEYLSDLLKDVDGALKNSKAKWKIVVGHHTIKSAGH-HG  160 (265)
Q Consensus        82 ~~y~~~~~~~~~i~lds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~~wl~~~l~~~~~~~~iv~~H~P~~~~~~-~~  160 (265)
                      ..+.+..+.+.++.+++......      ......     ......+|..|+.+.++.....+.|+++|+|+..... +.
T Consensus        99 ~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~-----~~~~~~~~~~~l~~~l~~~~~~~~il~~H~p~~~~~~~~~  167 (228)
T d1uf3a_          99 ETFTFWRGPYLVAGVGGEIADEG------EPEEHE-----ALRYPAWVAEYRLKALWELKDYPKIFLFHTMPYHKGLNEQ  167 (228)
T ss_dssp             TSEEEETTTEEEEEECSEEESSS------CCBSSS-----SCEEEHHHHHHHHGGGGGSCSCCEEEEESSCBCBTTTBTT
T ss_pred             eeeeeccCCEEEEecCCccccCc------Ccchhh-----hhhhhHHHHHHHHHHHhhccCCceEEEEeeeccCcccccc
Confidence            22334446777887776553210      000000     1122357899999999887777899999999876432 11


Q ss_pred             ChHHHHHHHHHHHHhCCccEEEeCCcccceEEeeCCeEEEEeCCCCCCCCCCCCCCCCccceeeecCCCeEEEEEeCCeE
Q 024595          161 VTKELLLRLLPILEENNVDMYVNGHDHCLQHISSNGIEFLTSGGGSKAWRGDRNWWSPEELKLYYDGQGFMSVKMTRSEA  240 (265)
Q Consensus       161 ~~~~~~~~l~~~~~~~~v~~vl~GH~H~~~~~~~~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~gy~~~~v~~~~i  240 (265)
                      .    ...+.++++++++++++|||+|..+ ...++..++..|+.                    ....|.++++.+.++
T Consensus       168 ~----~~~~~~~~~~~~~~lvl~GH~H~~~-~~~g~~~~v~pG~~--------------------~~g~y~~i~~~~~~i  222 (228)
T d1uf3a_         168 G----SHEVAHLIKTHNPLLVLVAGKGQKH-EMLGASWVVVPGDL--------------------SEGEYSLLDLRARKL  222 (228)
T ss_dssp             S----BHHHHHHHHHHCCSEEEECCSSCEE-EEETTEEEEECCBG--------------------GGTEEEEEETTTTEE
T ss_pred             c----cHHHHHHHHhcCCcEEEEcccccch-hccCCEEEEECCcc--------------------ccceEEEEEccCCEE
Confidence            1    1346677888899999999999864 33355545443322                    134688999998887


Q ss_pred             EEE
Q 024595          241 VVL  243 (265)
Q Consensus       241 ~~~  243 (265)
                      ++.
T Consensus       223 e~~  225 (228)
T d1uf3a_         223 ETG  225 (228)
T ss_dssp             EEE
T ss_pred             EEE
Confidence            764

>d2yvta1 d.159.1.6 (A:4-260) Uncharacterized protein Aq_1956 {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a+b)
fold: Metallo-dependent phosphatases
superfamily: Metallo-dependent phosphatases
family: TT1561-like
domain: Uncharacterized protein Aq 1956
species: Aquifex aeolicus [TaxId: 63363]

Probab=99.73  E-value=3e-18  Score=136.81  Aligned_cols=206  Identities=9%  Similarity=-0.004  Sum_probs=114.9

Q ss_pred             ccccccCCCEEEecCCccCCCCCCCCCChhhhhh----------------------ccccc-CCCCCCCceEEcCCCccc
Q 024595            3 LIGEKLEIDFVISTGDNFYEDGLTGEEDPAFLDS----------------------FTSIY-TAPSLQKQWYNVLGNHDY   59 (265)
Q Consensus         3 ~~~~~~~pd~vv~~GD~~~~~g~~~~~~~~~~~~----------------------~~~~~-~~~~l~~p~~~i~GNHD~   59 (265)
                      +.+.+++||+||++||+++ .+..+   .++...                      +..++ ....+++|+++|+||||.
T Consensus        23 ~~~~~~~~D~vli~GDl~~-~~~~~---~~~~~~~~~~~~~~~~~~~~~~n~d~~~~~~~~~~L~~~~~pv~~i~GNHD~   98 (257)
T d2yvta1          23 GVIAEKQPDILVVVGNILK-NEALE---KEYERAHLARREPNRKVIHENEHYIIETLDKFFREIGELGVKTFVVPGKNDA   98 (257)
T ss_dssp             HHHHHHCCSEEEEESCCCC-CHHHH---HHHHHHHHTTCCCCTHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCTTSC
T ss_pred             HHHhhcCCCEEEEecccCC-CCCCC---HHHHHHHHhhhhhceeeeccccccchhhHHHHHHHHHhcCCcEEEEeCCCcc
Confidence            3456789999999999993 22110   111100                      00001 012357899999999996


Q ss_pred             CCCccccccccccccCCCcee-eeeeEecCceEEEEEEeCccccccccCCCCCCCCCccccchhhhhHHHHHHHHHHHhh
Q 024595           60 RGDVEAQLSPVLTRKDSRWLC-SRSFILDAEIAEFVFVDTTPFVDEYFEDPGDSTYDWRGVYRRKEYLSDLLKDVDGALK  138 (265)
Q Consensus        60 ~~~~~~~~~~~~~~~~~~~~~-~~~y~~~~~~~~~i~lds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~~wl~~~l~  138 (265)
                      .........+........... ...+....+.+.++.+++......+         ......   ...+.+..|+...+.
T Consensus        99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~---~~~~~~~~~~~~~~~  166 (257)
T d2yvta1          99 PLKIFLRAAYEAETAYPNIRVLHEGFAGWRGEFEVIGFGGLLTEHEF---------EEDFVL---KYPRWYVEYILKFVN  166 (257)
T ss_dssp             CHHHHHHHHHHTTTTCTTEEECSSEEEEETTTEEEEEECSEEESSCC---------BSSSSC---EEEHHHHHHHGGGGG
T ss_pred             hhhHHHHHhccccccccccccccceeEEecCCeEEEEeccccCCccc---------cchhhh---hhhhhHHHHHHHHhh
Confidence            432111100000000000110 1223333466777777765432110         000000   111234566777777


Q ss_pred             cCCCCeEEEEeccccccCCCCCC----hHHHHHHHHHHHHhCCccEEEeCCcccceEEeeCCeEEEEeCCCCCCCCCCCC
Q 024595          139 NSKAKWKIVVGHHTIKSAGHHGV----TKELLLRLLPILEENNVDMYVNGHDHCLQHISSNGIEFLTSGGGSKAWRGDRN  214 (265)
Q Consensus       139 ~~~~~~~iv~~H~P~~~~~~~~~----~~~~~~~l~~~~~~~~v~~vl~GH~H~~~~~~~~~~~~i~~g~~~~~~~~~~~  214 (265)
                      ..+..+.|+++|+|+........    .......+..++++++++++++||.|... ...++..++..|+.         
T Consensus       167 ~~~~~~~Il~~H~pp~~~~~~~~~~~~~~~g~~~l~~~l~~~~~~~~~~GHiH~~~-~~~g~~~~~~pGs~---------  236 (257)
T d2yvta1         167 ELKPRRLVTIFYTPPIGEFVDRTPEDPKHHGSAVVNTIIKSLNPEVAIVGHVGKGH-ELVGNTIVVNPGEF---------  236 (257)
T ss_dssp             GSCCCEEEEEESSCCSCSSTTCBTTBSCCCSCHHHHHHHHHHCCSEEEECSSCCEE-EEETTEEEEECCBG---------
T ss_pred             hcccccEEEEEccccccccccccccchhhhhhHHHHHhhhhcCCcEEEEEeecCCe-EecCCeEEEECCcc---------
Confidence            77888899999999875432100    00112457788999999999999999865 34466666654421         


Q ss_pred             CCCCccceeeecCCCeEEEEEeCCeEEEEEE
Q 024595          215 WWSPEELKLYYDGQGFMSVKMTRSEAVVLFY  245 (265)
Q Consensus       215 ~~~~~~~~~~~~~~gy~~~~v~~~~i~~~~~  245 (265)
                                 ...+|.++++++++++++.+
T Consensus       237 -----------~~g~y~~id~~~~~i~~~~~  256 (257)
T d2yvta1         237 -----------EEGRYAFLDLTQHKIKLEQF  256 (257)
T ss_dssp             -----------GGTEEEEEETTTTEEEEEEC
T ss_pred             -----------ccCEEEEEEEeCCEEEEEEC
Confidence                       24579999999999999865

>d2a22a1 d.159.1.7 (A:4-196) Vacuolar protein sorting 29, VPS29 {Cryptosporidium parvum [TaxId: 5807]}

class: Alpha and beta proteins (a+b)
fold: Metallo-dependent phosphatases
superfamily: Metallo-dependent phosphatases
family: YfcE-like
domain: Vacuolar protein sorting 29, VPS29
species: Cryptosporidium parvum [TaxId: 5807]

Probab=99.52  E-value=6e-13  Score=101.51  Aligned_cols=99  Identities=21%  Similarity=0.246  Sum_probs=68.5

Q ss_pred             eEEEEeccccccCCCCCChHHHHHHHHHHHHhCCccEEEeCCcccceEEeeCCeEEEEeCCCCCCCCCCCCCCCCcccee
Q 024595          144 WKIVVGHHTIKSAGHHGVTKELLLRLLPILEENNVDMYVNGHDHCLQHISSNGIEFLTSGGGSKAWRGDRNWWSPEELKL  223 (265)
Q Consensus       144 ~~iv~~H~P~~~~~~~~~~~~~~~~l~~~~~~~~v~~vl~GH~H~~~~~~~~~~~~i~~g~~~~~~~~~~~~~~~~~~~~  223 (265)
                      ++|+++|.......  +.    .+.+..++.+.+++++++||+|.......++..++..|+.+.+......         
T Consensus        92 ~~i~l~H~~~~~~~--~~----~~~l~~~~~~~~~dvvi~GHTH~~~~~~~~g~~~iNPGSvg~pr~~~~~---------  156 (193)
T d2a22a1          92 FKIGLMHGNQVLPW--DD----PGSLEQWQRRLDCDILVTGHTHKLRVFEKNGKLFLNPGTATGAFSALTP---------  156 (193)
T ss_dssp             EEEEEECSTTSSST--TC----HHHHHHHHHHHTCSEEEECSSCCCEEEEETTEEEEECCCSSCCCCTTST---------
T ss_pred             EEEEEEeccCCCCC--CC----HHHHHHHHhhcCCCEEEEcCccCceEEEECCEEEEECCCCCcCcCCCCC---------
Confidence            35666665432211  12    2345566777789999999999998888899999999988765422110         


Q ss_pred             eecCCCeEEEEEeCCeEEEEEEecCCCe--EEEEEcc
Q 024595          224 YYDGQGFMSVKMTRSEAVVLFYDVHGNI--LHKWSIP  258 (265)
Q Consensus       224 ~~~~~gy~~~~v~~~~i~~~~~~~~g~~--~~~~~i~  258 (265)
                       ....+|++++++++.+++++|+..+..  +..+++.
T Consensus       157 -~~~~syaild~~~~~v~v~~y~l~~~~~~~~~~~~~  192 (193)
T d2a22a1         157 -DAPPSFMLMALQGNKVVLYVYDLRDGKTNVAMSEFS  192 (193)
T ss_dssp             -TCCCEEEEEEEETTEEEEEEEEEETTEEEEEEEEEE
T ss_pred             -CCCCEEEEEEEECCEEEEEEEEecCCeEEEEEEEEe
Confidence             134589999999999999999965543  4455544

>d1z2wa1 d.159.1.7 (A:1-182) Vacuolar protein sorting 29, VPS29 {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Metallo-dependent phosphatases
superfamily: Metallo-dependent phosphatases
family: YfcE-like
domain: Vacuolar protein sorting 29, VPS29
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.50  E-value=8.9e-13  Score=99.41  Aligned_cols=100  Identities=18%  Similarity=0.269  Sum_probs=70.3

Q ss_pred             EEEEeccccccCCCCCChHHHHHHHHHHHHhCCccEEEeCCcccceEEeeCCeEEEEeCCCCCCCCCCCCCCCCccceee
Q 024595          145 KIVVGHHTIKSAGHHGVTKELLLRLLPILEENNVDMYVNGHDHCLQHISSNGIEFLTSGGGSKAWRGDRNWWSPEELKLY  224 (265)
Q Consensus       145 ~iv~~H~P~~~~~~~~~~~~~~~~l~~~~~~~~v~~vl~GH~H~~~~~~~~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~  224 (265)
                      +++++|.+.+...  +.    .+.+....+..+.+++++||+|.......+++.++..|+.+.+..+...          
T Consensus        81 ~i~~~Hg~~~~~~--~~----~~~l~~~~~~~~~divi~GHTH~p~~~~~~~~~~iNPGSv~~pr~~~~~----------  144 (182)
T d1z2wa1          81 KIGLIHGHQVIPW--GD----MASLALLQRQFDVDILISGHTHKFEAFEHENKFYINPGSATGAYNALET----------  144 (182)
T ss_dssp             EEEEECSCCCCBT--TC----HHHHHHHHHHHSSSEEECCSSCCCEEEEETTEEEEECCCTTCCCCSSCS----------
T ss_pred             EEEEEeCCCCCCC--CC----HHHHHHHHhccCCCEEEECCcCcceEEEECCEEEEeCCCCCCCCCCCCC----------
Confidence            4666666543221  12    2344556666789999999999998887899999999888765432110          


Q ss_pred             ecCCCeEEEEEeCCeEEEEEEecCCCe--EEEEEccCC
Q 024595          225 YDGQGFMSVKMTRSEAVVLFYDVHGNI--LHKWSIPKE  260 (265)
Q Consensus       225 ~~~~gy~~~~v~~~~i~~~~~~~~g~~--~~~~~i~~~  260 (265)
                      ...+.|++++++++++++.+|+..+..  +.++++.|+
T Consensus       145 ~~~~syaild~~~~~v~~~~~~l~~~~v~~~~~~~~~~  182 (182)
T d1z2wa1         145 NIIPSFVLMDIQASTVVTYVYQLIGDDVKVERIEYKKS  182 (182)
T ss_dssp             CCCCEEEEEEEETTEEEEEEEEEETTEEEEEEEEEECC
T ss_pred             CCCCEEEEEEEeCCEEEEEEEEecCCcEEEEEEEEEcC
Confidence            134579999999999999999966555  556666664

>d3ck2a1 d.159.1.7 (A:1-173) Uncharacterized protein SP1879 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a+b)
fold: Metallo-dependent phosphatases
superfamily: Metallo-dependent phosphatases
family: YfcE-like
domain: Uncharacterized protein SP1879
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=99.35  E-value=2.7e-11  Score=90.44  Aligned_cols=90  Identities=19%  Similarity=0.134  Sum_probs=66.9

Q ss_pred             EEEEeccccccCCCCCChHHHHHHHHHHHHhCCccEEEeCCcccceEEeeCCeEEEEeCCCCCCCCCCCCCCCCccceee
Q 024595          145 KIVVGHHTIKSAGHHGVTKELLLRLLPILEENNVDMYVNGHDHCLQHISSNGIEFLTSGGGSKAWRGDRNWWSPEELKLY  224 (265)
Q Consensus       145 ~iv~~H~P~~~~~~~~~~~~~~~~l~~~~~~~~v~~vl~GH~H~~~~~~~~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~  224 (265)
                      +++++|..++....  ..    +.+...+...+.+++++||+|.......+++.++..|+.|.+....            
T Consensus        76 ~~~~~Hg~~~~~~~--~~----~~l~~~~~~~~~dvvi~GHTH~p~~~~~~~~~~iNPGSvg~pr~~~------------  137 (173)
T d3ck2a1          76 KIIQTHGHLFDINF--NF----QKLDYWAQEEEAAICLYGHLHVPSAWLEGKILFLNPGSISQPRGTI------------  137 (173)
T ss_dssp             EEEEECSGGGTTTT--CS----HHHHHHHHHTTCSEEECCSSCCEEEEEETTEEEEEECCSSSCCTTC------------
T ss_pred             EEEEEeCcCCCCCC--CH----HHHHHHHHhcCCCEEEeCCcCcceEEEECCEEEEECCCCCCCCCCC------------
Confidence            46666665443321  11    2345566677899999999999998888999999999988654211            


Q ss_pred             ecCCCeEEEEEeCCeEEEEEEecCCCeEE
Q 024595          225 YDGQGFMSVKMTRSEAVVLFYDVHGNILH  253 (265)
Q Consensus       225 ~~~~gy~~~~v~~~~i~~~~~~~~g~~~~  253 (265)
                       ....|++++++++.+++++++.+++++.
T Consensus       138 -~~~syail~~~~~~~~v~~~~~d~~~~~  165 (173)
T d3ck2a1         138 -RECLYARVEIDDSYFKVDFLTRDHEVYP  165 (173)
T ss_dssp             -CSCCEEEEEECSSEEEEEEECTTSCBCT
T ss_pred             -CCCEEEEEEEeCCEEEEEEEEeCCeEeh
Confidence             2458999999999999999998887643

>d1nnwa_ d.159.1.5 (A:) Hypothetical protein PF1291 {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a+b)
fold: Metallo-dependent phosphatases
superfamily: Metallo-dependent phosphatases
family: Phosphoesterase-related
domain: Hypothetical protein PF1291
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=99.23  E-value=2.2e-12  Score=101.98  Aligned_cols=108  Identities=6%  Similarity=-0.106  Sum_probs=67.4

Q ss_pred             hhHHHHHHHHHHHhhc---CCCCeEEEEeccccccCCCCCCh-HHHHHHHHHHHHh-CCccEEEeCCcccceEEeeCCeE
Q 024595          124 EYLSDLLKDVDGALKN---SKAKWKIVVGHHTIKSAGHHGVT-KELLLRLLPILEE-NNVDMYVNGHDHCLQHISSNGIE  198 (265)
Q Consensus       124 ~~~~~Q~~wl~~~l~~---~~~~~~iv~~H~P~~~~~~~~~~-~~~~~~l~~~~~~-~~v~~vl~GH~H~~~~~~~~~~~  198 (265)
                      .+.++++.|+++....   ......++++|+++......... ......+...+.. .+.+++++||+|.......++..
T Consensus       108 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~H~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~GHtH~~~~~~~~~~~  187 (251)
T d1nnwa_         108 KLGHEGREYLRDLPIYLVDKIGGNEVFGVYGSPINPFDGEVLAEQPTSYYEAIMRPVKDYEMLIVASPMYPVDAMTRYGR  187 (251)
T ss_dssp             HHHHHHHHHHHTSCSCEEEEETTEEEEEESSCSSCTTTCCCCSSCCHHHHHHHHGGGTTSSEEEESTTCSEEEEEETTEE
T ss_pred             hcCHHHHHHHHhcccceEEeeCCCcEEEEecCccCcccchhhhhhHHHHHhhhcccccCceEEEEeccceEEEEEeeeee
Confidence            4456777887665433   12345788889876644321111 0111222223333 36899999999998888889999


Q ss_pred             EEEeCCCCCCCCCCCCCCCCccceeeecCCCeEEEEEeCCeEEEEE
Q 024595          199 FLTSGGGSKAWRGDRNWWSPEELKLYYDGQGFMSVKMTRSEAVVLF  244 (265)
Q Consensus       199 ~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~gy~~~~v~~~~i~~~~  244 (265)
                      ++.+|+.|.+..+.             ....|++++++..++++..
T Consensus       188 ~in~Gsvg~~~~g~-------------~~~~y~i~d~~~~~~~~~~  220 (251)
T d1nnwa_         188 VVCPGSVGFPPGKE-------------HKATFALVDVDTLKPKFIE  220 (251)
T ss_dssp             EEEECCSSSCSSSS-------------CCEEEEEEETTTCCEEEEE
T ss_pred             ccccccccccCCCC-------------CCCeEEEEEcCCCeEEEEE
Confidence            99999887654221             1346889998776666543

>d1s3la_ d.159.1.7 (A:) Putative phosphodiesterase MJ0936 {Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a+b)
fold: Metallo-dependent phosphatases
superfamily: Metallo-dependent phosphatases
family: YfcE-like
domain: Putative phosphodiesterase MJ0936
species: Methanococcus jannaschii [TaxId: 2190]

Probab=99.21  E-value=1.2e-10  Score=86.33  Aligned_cols=72  Identities=13%  Similarity=0.080  Sum_probs=53.6

Q ss_pred             eEEEEeccccccCCCCCChHHHHHHHHHHHHhCCccEEEeCCcccceEEeeCCeEEEEeCCCCCCCCCCCCCCCCcccee
Q 024595          144 WKIVVGHHTIKSAGHHGVTKELLLRLLPILEENNVDMYVNGHDHCLQHISSNGIEFLTSGGGSKAWRGDRNWWSPEELKL  223 (265)
Q Consensus       144 ~~iv~~H~P~~~~~~~~~~~~~~~~l~~~~~~~~v~~vl~GH~H~~~~~~~~~~~~i~~g~~~~~~~~~~~~~~~~~~~~  223 (265)
                      .+|+++|.++.            ..+..+++..+++++++||+|.......++..++..|+.|.+..             
T Consensus        91 ~~i~l~Hg~~~------------~~~~~~~~~~~~d~v~~GHtH~~~~~~~~~~~~iNPGSvg~p~~-------------  145 (165)
T d1s3la_          91 LKFFITHGHHQ------------SVLEMAIKSGLYDVVIYGHTHERVFEEVDDVLVINPGECCGYLT-------------  145 (165)
T ss_dssp             EEEEEEESCCH------------HHHHHHHHHSCCSEEEEECSSCCEEEEETTEEEEECCCSSCTTT-------------
T ss_pred             cEEEEEECCcc------------cHHHHHhhcCCCCEEEECCcCcceEEEECCEEEEECCCCCCCCC-------------
Confidence            36888887643            12334566788999999999999888889999999888875431             


Q ss_pred             eecCCCeEEEEEeCCeEEE
Q 024595          224 YYDGQGFMSVKMTRSEAVV  242 (265)
Q Consensus       224 ~~~~~gy~~~~v~~~~i~~  242 (265)
                        +.+.|+++++++++++.
T Consensus       146 --~~~s~~ild~~~~~~~~  162 (165)
T d1s3la_         146 --GIPTIGILDTEKKEYRE  162 (165)
T ss_dssp             --SCCEEEEEETTTTEEEE
T ss_pred             --CCCEEEEEEccCCeEEE
Confidence              23469999998886654

>d1ii7a_ d.159.1.4 (A:) Mre11 {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a+b)
fold: Metallo-dependent phosphatases
superfamily: Metallo-dependent phosphatases
family: DNA double-strand break repair nuclease
domain: Mre11
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=99.20  E-value=5.7e-13  Score=109.65  Aligned_cols=55  Identities=22%  Similarity=0.372  Sum_probs=34.1

Q ss_pred             cccccCCCEEEecCCccCCCCCCCCCChhhhhhccccc-CCCCCCCceEEcCCCcccCCC
Q 024595            4 IGEKLEIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIY-TAPSLQKQWYNVLGNHDYRGD   62 (265)
Q Consensus         4 ~~~~~~pd~vv~~GD~~~~~g~~~~~~~~~~~~~~~~~-~~~~l~~p~~~i~GNHD~~~~   62 (265)
                      .|.+.+||+||++||+++ .+..+   ......+...+ .....++|+++++||||....
T Consensus        35 ~a~~~~~D~vli~GDlfd-~~~~~---~~~~~~~~~~~~~l~~~~i~v~~i~GNHD~~~~   90 (333)
T d1ii7a_          35 IAVQENVDFILIAGDLFH-SSRPS---PGTLKKAIALLQIPKEHSIPVFAIEGNHDRTQR   90 (333)
T ss_dssp             HHHHTTCSEEEEESCSBS-SSSCC---HHHHHHHHHHHHHHHTTTCCEEEECCTTTCCSS
T ss_pred             HHHHcCCCEEEECCCCCC-CCCCC---HHHHHHHHHHHhhHHhcCCcEEEeCCCCccccc
Confidence            355679999999999984 33221   22222211111 112357999999999998654

>d1su1a_ d.159.1.7 (A:) Phosphodiesterase yfcE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Metallo-dependent phosphatases
superfamily: Metallo-dependent phosphatases
family: YfcE-like
domain: Phosphodiesterase yfcE
species: Escherichia coli [TaxId: 562]

Probab=98.87  E-value=1.1e-08  Score=76.62  Aligned_cols=67  Identities=19%  Similarity=0.184  Sum_probs=46.7

Q ss_pred             CCccEEEeCCcccceEEeeCCeEEEEeCCCCCCCCCCCCCCCCccceeeecCCCeEEEEEeCCeEEEEEEecCCCeEEEE
Q 024595          176 NNVDMYVNGHDHCLQHISSNGIEFLTSGGGSKAWRGDRNWWSPEELKLYYDGQGFMSVKMTRSEAVVLFYDVHGNILHKW  255 (265)
Q Consensus       176 ~~v~~vl~GH~H~~~~~~~~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~gy~~~~v~~~~i~~~~~~~~g~~~~~~  255 (265)
                      .+.+++++||+|.......+++.++..|+.+.+...              ....|++++..  ..++..+ -+++++.+.
T Consensus       118 ~~~d~vv~GHtH~p~~~~~~~~~~iNpGS~~~pr~~--------------~~~sy~il~~~--~~~v~~~-~~~~v~~~~  180 (184)
T d1su1a_         118 NQNDVLVYGHTHLPVAEQRGEIFHFNPGSVSIPKGG--------------NPASYGMLDND--VLSVIAL-NDQSIIAQV  180 (184)
T ss_dssp             CTTCEEECCSSCCCEEEEETTEEEEECCCSSCCCTT--------------CCCEEEEEETT--EEEEEET-TTCCEEEEE
T ss_pred             cCCCEEEECCccceeEEEECCEEEEECCCCCCCCCC--------------CCCEEEEEECC--CcEEEEE-eCCEEEEEE
Confidence            356899999999988888899999998877644211              12467887754  4444333 367788888


Q ss_pred             EccC
Q 024595          256 SIPK  259 (265)
Q Consensus       256 ~i~~  259 (265)
                      +|.+
T Consensus       181 ~~~p  184 (184)
T d1su1a_         181 AINP  184 (184)
T ss_dssp             ECCC
T ss_pred             ecCC
Confidence            7753

>d1xm7a_ d.159.1.8 (A:) Hypothetical protein aq_1666 {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a+b)
fold: Metallo-dependent phosphatases
superfamily: Metallo-dependent phosphatases
family: Hypothetical protein aq 1666
domain: Hypothetical protein aq 1666
species: Aquifex aeolicus [TaxId: 63363]

Probab=98.60  E-value=1.9e-07  Score=69.99  Aligned_cols=46  Identities=20%  Similarity=0.231  Sum_probs=33.1

Q ss_pred             eEEEEeccccccCCCCCChHHHHHHHHHHHHhCCccEEEeCCcccce
Q 024595          144 WKIVVGHHTIKSAGHHGVTKELLLRLLPILEENNVDMYVNGHDHCLQ  190 (265)
Q Consensus       144 ~~iv~~H~P~~~~~~~~~~~~~~~~l~~~~~~~~v~~vl~GH~H~~~  190 (265)
                      ..|+++|.|+........ ......+.....+.+..++|+||+|...
T Consensus       107 ~~i~l~H~P~~~~~~~~~-~~~~~~~~~~~~~~~~~~~lhGH~H~~~  152 (188)
T d1xm7a_         107 KRILLSHYPAKDPITERY-PDRQEMVREIYFKENCDLLIHGHVHWNR  152 (188)
T ss_dssp             EEEEEESSCSSCSSCCSC-HHHHHHHHHHHHHTTCSEEEECCCCCCS
T ss_pred             eEEEEEeCCCcccccccc-ccchhHHHHHHHhcCceEEEEeeccCCc
Confidence            478999999865443222 2234556677888899999999999754

>d1usha2 d.159.1.2 (A:26-362) 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Metallo-dependent phosphatases
superfamily: Metallo-dependent phosphatases
family: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain
domain: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=98.37  E-value=2.1e-06  Score=70.21  Aligned_cols=58  Identities=21%  Similarity=0.244  Sum_probs=34.2

Q ss_pred             HHhhc-CCCCeEEEEeccccccCCCCCChHHHHHHHHHHHHhCCccEEEeCCcccceEE
Q 024595          135 GALKN-SKAKWKIVVGHHTIKSAGHHGVTKELLLRLLPILEENNVDMYVNGHDHCLQHI  192 (265)
Q Consensus       135 ~~l~~-~~~~~~iv~~H~P~~~~~~~~~~~~~~~~l~~~~~~~~v~~vl~GH~H~~~~~  192 (265)
                      ++|.+ .+...+|+++|.+................+...+...+|++++.||+|.....
T Consensus       176 ~~l~~~~~~D~iI~lsH~G~~~d~~~~~~~~~~~~la~~~~~~~vD~IvgGHsH~~~~~  234 (337)
T d1usha2         176 QELQQTEKPDIIIAATHMGHYDNGEHGSNAPGDVEMARALPAGSLAMIVGGHSQDPVCM  234 (337)
T ss_dssp             HHHHHHTCCSEEEEEEESCCCGGGCCTTSCCCHHHHHHHSCTTSSSEEECCSSCCBCCE
T ss_pred             HHHhhccCCCEEEEecccCcccccccccccchhHHHHHhCcccCceEEecCccCccccc
Confidence            34443 45678999999987544322111110122333333457999999999987543

>d3c9fa2 d.159.1.2 (A:16-337) 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain {Candida albicans [TaxId: 5476]}

class: Alpha and beta proteins (a+b)
fold: Metallo-dependent phosphatases
superfamily: Metallo-dependent phosphatases
family: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain
domain: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain
species: Candida albicans [TaxId: 5476]

Probab=97.87  E-value=0.00013  Score=58.69  Aligned_cols=69  Identities=23%  Similarity=0.151  Sum_probs=36.5

Q ss_pred             HHHHHHhhcCCCCeEEEEeccccccCCCCCChHHHHHHHHHHHHhC-C-ccEEEeCCcccceEEee-CCeEEEEeCCC
Q 024595          131 KDVDGALKNSKAKWKIVVGHHTIKSAGHHGVTKELLLRLLPILEEN-N-VDMYVNGHDHCLQHISS-NGIEFLTSGGG  205 (265)
Q Consensus       131 ~wl~~~l~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~l~~~~~~~-~-v~~vl~GH~H~~~~~~~-~~~~~i~~g~~  205 (265)
                      .|+.+.++ .+...+|+++|.++....   .  +.......+.+.. + +++++.||+|....... .....+.+|.-
T Consensus       184 ~~~~~~~~-~~~D~IV~l~H~g~~~d~---~--~~~~~~~~la~~~~~~~~~iigGHsH~~~~~~~d~~~~~~~aG~y  255 (322)
T d3c9fa2         184 PWFQEALK-HEVDLIIIVGHTPISHNW---G--EFYQVHQYLRQFFPDTIIQYFGGHSHIRDFTVFDSLSTGLQSGRY  255 (322)
T ss_dssp             HHHHHHTT-SCCSEEEEECSSCCCTTT---C--HHHHHHHHHHHHCTTSEEEEEECSSCCEEEEEEETTEEEEEECST
T ss_pred             HHHHHHHh-CCCCEEEEEecCCccccc---c--ccchHHHHHHHhCCCCCEEEeccccccccccccCCcceEEeeccc
Confidence            45554443 356678899998764321   1  1111112222222 3 44699999997544333 55556555543

>d2z1aa2 d.159.1.2 (A:28-329) 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a+b)
fold: Metallo-dependent phosphatases
superfamily: Metallo-dependent phosphatases
family: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain
domain: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain
species: Thermus thermophilus [TaxId: 274]

Probab=96.10  E-value=0.02  Score=44.97  Aligned_cols=48  Identities=23%  Similarity=0.228  Sum_probs=30.3

Q ss_pred             HHHHHHHhhcCCCCeEEEEeccccccCCCCCChHHHHHHHHHHHHhC-CccEEEeCCcccce
Q 024595          130 LKDVDGALKNSKAKWKIVVGHHTIKSAGHHGVTKELLLRLLPILEEN-NVDMYVNGHDHCLQ  190 (265)
Q Consensus       130 ~~wl~~~l~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~l~~~~~~~-~v~~vl~GH~H~~~  190 (265)
                      .++..+.|++.....+|+++|....         .    -..+.++. +|+++++||+|...
T Consensus       168 ~~~~~~~l~~~~~DiiV~l~H~g~~---------~----d~~la~~~~giD~ii~gh~h~~~  216 (302)
T d2z1aa2         168 AQKAVYELLAKGVNKIVVLSHLGYG---------E----DLKLARRLVGVQVIVGGHSHTLL  216 (302)
T ss_dssp             HHHHHHHHHHTTCCCEEEEEESCHH---------H----HHHHHTTCSSCCEEEECSSCCCB
T ss_pred             HHHHHHHhhccCCCEEEEeeccCcc---------h----hhHHHhcCCCeeeeecCccceee
Confidence            3444444544456678999998421         1    12344443 79999999999754

>d1g5ba_ d.159.1.3 (A:) lambda ser/thr protein phosphatase {Bacteriophage lambda [TaxId: 10710]}

class: Alpha and beta proteins (a+b)
fold: Metallo-dependent phosphatases
superfamily: Metallo-dependent phosphatases
family: Protein serine/threonine phosphatase
domain: lambda ser/thr protein phosphatase
species: Bacteriophage lambda [TaxId: 10710]

Probab=94.45  E-value=0.0066  Score=45.30  Aligned_cols=29  Identities=14%  Similarity=0.385  Sum_probs=22.2

Q ss_pred             CccEEEeCCcccceEEeeCCeEEEEeCCC
Q 024595          177 NVDMYVNGHDHCLQHISSNGIEFLTSGGG  205 (265)
Q Consensus       177 ~v~~vl~GH~H~~~~~~~~~~~~i~~g~~  205 (265)
                      +.+.+++||+|.......+++.+|-+|+.
T Consensus       178 ~~~~vV~GHt~~~~~~~~~~~i~IDtG~~  206 (219)
T d1g5ba_         178 GADTFIFGHTPAVKPLKFANQMYIDTGAV  206 (219)
T ss_dssp             TSSEEEECSSCCSSCEEETTEEECCCCHH
T ss_pred             CCCEEEECCcCCCCcEEeCCEEEEECCcC
Confidence            35789999999988777777777765543

>d1t70a_ d.159.1.9 (A:) Putative phosphatase DR1281 {Deinococcus radiodurans [TaxId: 1299]}

class: Alpha and beta proteins (a+b)
fold: Metallo-dependent phosphatases
superfamily: Metallo-dependent phosphatases
family: DR1281-like
domain: Putative phosphatase DR1281
species: Deinococcus radiodurans [TaxId: 1299]

Probab=91.63  E-value=1.7  Score=32.35  Aligned_cols=73  Identities=16%  Similarity=0.107  Sum_probs=45.2

Q ss_pred             HHHHHHHhhcCCCCeEEEEeccccccCCCCCChHHHHHHHHHHHHhCCccEEEeCCcccceE---EeeCCeEEEEeCCCC
Q 024595          130 LKDVDGALKNSKAKWKIVVGHHTIKSAGHHGVTKELLLRLLPILEENNVDMYVNGHDHCLQH---ISSNGIEFLTSGGGS  206 (265)
Q Consensus       130 ~~wl~~~l~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~l~~~~~~~~v~~vl~GH~H~~~~---~~~~~~~~i~~g~~~  206 (265)
                      +.-+++.|++.+...+||=+|.         ..-..-..+.-.+ +.+|.+|+.=|+|..-.   ....|+.|++--+.+
T Consensus       128 F~~~d~~l~~~~~~~i~VDfHa---------EaTSEK~A~g~~l-dGrvsav~GTHTHV~TaD~rIlp~GTay~TDvGMt  197 (255)
T d1t70a_         128 FRTMDALLERDDLGTVFVDFHA---------EATSEKEAMGWHL-AGRVAAVIGTHTHVPTADTRILKGGTAYQTDAGFT  197 (255)
T ss_dssp             HHHHHHHTTCSSCCEEEEEEEC---------SCHHHHHHHHHHH-TTSSSEEEEESSCSCBSCCEEETTTEEEESCCCCB
T ss_pred             HHHHHHHHhhcCCCeEEEEccc---------hhHHHHHHHHhhh-cCcEEEEEecCcccccccceEecCCcEEEecCccc
Confidence            3335566666555666676887         2122223333344 46899999999998754   344799999766666


Q ss_pred             CCCCCC
Q 024595          207 KAWRGD  212 (265)
Q Consensus       207 ~~~~~~  212 (265)
                      +++.+.
T Consensus       198 G~~~SV  203 (255)
T d1t70a_         198 GPHDSI  203 (255)
T ss_dssp             EESSSB
T ss_pred             cchhhh
Confidence            554433

>d1t71a_ d.159.1.9 (A:) Hypothetical protein MPN349 {Mycoplasma pneumoniae [TaxId: 2104]}

class: Alpha and beta proteins (a+b)
fold: Metallo-dependent phosphatases
superfamily: Metallo-dependent phosphatases
family: DR1281-like
domain: Hypothetical protein MPN349
species: Mycoplasma pneumoniae [TaxId: 2104]

Probab=91.59  E-value=1.1  Score=33.91  Aligned_cols=65  Identities=17%  Similarity=0.177  Sum_probs=38.9

Q ss_pred             HHHHhhcCCCCeEEEEeccccccCCCCCChHHHHHHHHHHHHhCCccEEEeCCcccce---EEeeCCeEEEEeCCCCC
Q 024595          133 VDGALKNSKAKWKIVVGHHTIKSAGHHGVTKELLLRLLPILEENNVDMYVNGHDHCLQ---HISSNGIEFLTSGGGSK  207 (265)
Q Consensus       133 l~~~l~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~l~~~~~~~~v~~vl~GH~H~~~---~~~~~~~~~i~~g~~~~  207 (265)
                      +.+.+.+.+...+||=+|.         ..-..-..+.-.+ +.+|.+|+.=|+|..-   +...+|+.|++--+.++
T Consensus       141 ~~~~~~~~~~d~i~VDfHa---------EATSEK~A~g~~l-DGrvsaVvGTHTHV~TaD~rILp~GTAyiTDvGMtG  208 (281)
T d1t71a_         141 LKELILKRDCDLHIVDFHA---------ETTSEKNAFCMAF-DGYVTTIFGTHTHVPSADLRITPKGSAYITDVGMCG  208 (281)
T ss_dssp             HHHHHTTCCCSEEEEEEEC---------SCHHHHHHHHHHH-TTTSSEEEEESSSSCCTTCEECTTSCEEESCCCEEB
T ss_pred             HHHhhcccCCCeEEEEecc---------chhhhhhhheeee-CCcEEEEEecCcccccCccccccCCeEEEecCcccc
Confidence            3344444555666776887         2122223333344 4689999999999875   34448899995444433

>d2z06a1 d.159.1.10 (A:1-252) Hypothetical protein TTHA0625 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a+b)
fold: Metallo-dependent phosphatases
superfamily: Metallo-dependent phosphatases
family: TTHA0625-like
domain: Hypothetical protein TTHA0625
species: Thermus thermophilus [TaxId: 274]

Probab=89.76  E-value=2.9  Score=31.01  Aligned_cols=66  Identities=18%  Similarity=0.227  Sum_probs=40.5

Q ss_pred             HhhcCCCCeEEEEeccccccCCCCCChHHHHHHHHHHHHhCCccEEEeCCcccceE---EeeCCeEEEEeCCCCCCCCC
Q 024595          136 ALKNSKAKWKIVVGHHTIKSAGHHGVTKELLLRLLPILEENNVDMYVNGHDHCLQH---ISSNGIEFLTSGGGSKAWRG  211 (265)
Q Consensus       136 ~l~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~l~~~~~~~~v~~vl~GH~H~~~~---~~~~~~~~i~~g~~~~~~~~  211 (265)
                      .+.+.+...+||=+|.         ..-..-..+.-.+ +.+|.+|+.=|+|..-.   ....|+.|++--+.++++.+
T Consensus       131 ~~~~~~~~~i~VDfHa---------EaTSEK~A~g~~l-dGrvsavvGTHTHV~TaD~rILp~GTayiTDvGM~G~~~S  199 (252)
T d2z06a1         131 LLEEEKADYVLVEVHA---------EATSEKMALAHYL-DGRASAVLGTHTHVPTLDATRLPKGTLYQTDVGMTGTYHS  199 (252)
T ss_dssp             HHHHCCCSEEEEEEEC---------SCHHHHHHHHHHH-BTTBSEEEEESSCSCBSCCEECTTSCEEESCCCCBEESSS
T ss_pred             HHhhcCccEEEEEccc---------chhhhheeeeEec-CCCEEEEEecCccccccccEEecCCeEEEccCccccchhh
Confidence            3344455666666776         2122223333334 46899999999998754   34489999976666555433