Citrus Sinensis ID: 024609

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-----
Protein Sequence
MKFRFSNKVSVFPHYLRLEYDHHCRQFSTSFLRKLQTNPQVRASFSGGSNNSQGNTFLLPGATFATLLMLGALHARRMYDDRKVEEAREKGIEIEFKPDAKASFLRLLPLRSISRFWGFLTSVEYPVWMRPYVYKAWARAFHSNLEEAALPLGEYASLREFFVRTLKQGSRPIDPDPHCLVSPVDGIVLRVGELKGVGAMIEQVKGFSYSVSSLLGSSSFLPMIEEGDMHEQCGEQESSPTEKTKKSWWSISLASPRVRDTAITR
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccHHHHHHHcccccccEEEcccccccccccEEEccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEccHHHHHHHHHccHHHHHHHHHHHHccccccccHHHHHHHHHHHHcccHHHccccccccccccccccccccccccccccccccEEEccccEEEEEcEEEccccEEEEEccccccHHHccccccccccccccccccccccEEccccccccccEEEEEEcccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccEEccccEccccccccccHHHHHHccccccHHHHHcccccccccccEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHcccHHHHHccHHHHHHHHHHHHHHcccccccccccccEEEEccccEEEEcccccccccEEEEEccccEcHHHHHccHHHHHHHcccccccccccEEEccccccEEEEEEcccccccccHHHHcc
Coil and Loop (DISEMBL)
mkfrfsnkvsvfphylrleydhhcRQFSTSFLRklqtnpqvrasfsggsnnsqgntfllpgATFATLLMLGALHARRMYDDRKVEEAREKGieiefkpdakasflrlLPLRSISRFWGFLTsveypvwmrpYVYKAWARAFHSNLEEaalplgeyaSLREFFVRTLkqgsrpidpdphclvspvdgivLRVGELKGVGAMIEQVKGFSYSVSSllgsssflpmieegdmheqcgeqessptektkkswwsislasprvrdtaitr
Flexible Loop (DISEMBL)
mkfrfsnkvsvfphYLRLEYDHHCRQFSTSFLRKLQTNPQVRASFSGGSNNSQGNTFLLPGATFATLLMLGALHARRMYDDRKVEEAREkgieiefkpdakasfLRLLPLRSISRFWGFLTSVEYPVWMRPYVYKAWARAFHSNLEEAALPLGEYASLREFFVRTLKQgsrpidpdphclVSPVDGIVLRVGELKGVGAMIEQVKGFSYSVSSLLGSSSFLPMIEEGDMHEQCGeqessptektkkswwsislasprvrdtaitr
Low Complexity Region (SEG)
MKFRFSNKVSVFPHYLRLEYDHHCRQFSTSFLRKLQTNPQVRASFsggsnnsqgnTFLLPGATFATLLMLGALHARRMYDDRKVEEAREKGIEIEFKPDAKASFLRLLPLRSISRFWGFLTSVEYPVWMRPYVYKAWARAFHSNLEEAALPLGEYASLREFFVRTLKQGSRPIDPDPHCLVSPVDGIVLRVGELKGVGAMIEQVKgfsysvssllgsssflPMIEEGDMHEQCGEQESSPTEKTKKSWWSISLASPRVRDTAITR
Disordered region (IsUnstruct)
******NKVSVFPHYLRLEYDHHCRQFSTSFLRKL*******************NTFLLPGATFATLLMLGALHARRMYDDRKVE***EKGIEIEFKPDAKASFLRLLPLRSISRFWGFLTSVEYPVWMRPYVYKAWARAFHSNLEEAALPLGEYASLREFFVRTLKQGSRPIDPDPHCLVSPVDGIVLRVGELKGVGAMIEQVKGFSYSVSSLLGS************************************************
Disordered Region (DISOPRED)
********VS*********************************************TFLLPGATFATLLMLGALHARRMYDDRKV*****K*I*IEFKPDAKASFLRLLPLRSISRFWGFLTSVEYPVWMRPYVYKAWARAFHSNLEEAALPLGEYASLREFFVRTLKQGSRPIDPDPHCLVSPVDGIVLRVGELKGVGAMIEQVKGFSYSVSSLLGSSSFLPMIEEGDMHEQCGEQESSPTEKTKKSWWSISLASPRVRDTA***
Disordered Region (DISEMBL)
********VSVFPHYLRLEYDHHCRQFSTSFLRKLQTNPQVRASFSGGSNNSQGNTFLLPGATFATLLMLGALHARRMYDDRKVEEAREKGIEIEFKPDAKASFLRLLPLRSISRFWGFLTSVEYPVWMRPYVYKAWARAFHSNLEEAALPLGEYASLREFFVRTLKQGSRPIDPDPHCLVSPVDGIVLRVGELKGVGAMIEQVKGFSYSVSSLLGSSSFLPMIEEGDM******************WWSISLASPRVRDTAITR
Disordered Region (DISPRO)
*KFRFSNKVSVFPHYLRLEYDHHCRQFSTSFLRKLQTN************NSQGNTFLLPGATFATLLMLGALHARRMYDDRKVEEAREKGIEIEFKPDAKASFLRLLPLRSISRFWGFLTSVEYPVWMRPYVYKAWARAFHSNLEEAALPLGEYASLREFFVRTLKQGSRPIDPDPHCLVSPVDGIVLRVGELKGVGAMIEQVKGFSYSVSSLLGSSSFLPMIEEGDMHEQCGEQESSPTEKTKKSWWSISLASPRVRDTAI**
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MKFRFSNKVSVFPHYLRLEYDHHCRQFSTSFLRKLQTNPQVRASFSGGSNNSQGNTFLLPGATFATLLMLGALHARRMYDDRKVEEAREKGIEIEFKPDAKASFLRLLPLRSISRFWGFLTSVEYPVWMRPYVYKAWARAFHSNLEEAALPLGEYASLREFFVRTLKQGSRPIDPDPHCLVSPVDGIVLRVGELKGVGAMIEQVKGFSYSVSSLLGSSSFLPMIEEGDMHEQCGEQESSPTEKTKKSWWSISLASPRVRDTAITR
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	265	2.2.26 [Sep-21-2011]
O14333	437	Phosphatidylserine decarb	yes	no	0.622	0.377	0.362	9e-21
P39006	500	Phosphatidylserine decarb	yes	no	0.422	0.224	0.424	1e-20
Q9UG56	409	Phosphatidylserine decarb	yes	no	0.554	0.359	0.372	4e-17
P27465	409	Phosphatidylserine decarb	yes	no	0.554	0.359	0.352	5e-17
Q5R8I8	409	Phosphatidylserine decarb	yes	no	0.539	0.349	0.375	5e-17
Q58DH2	416	Phosphatidylserine decarb	yes	no	0.452	0.288	0.395	2e-16
Q8BSF4	406	Phosphatidylserine decarb	yes	no	0.539	0.352	0.369	2e-16
Q10949	377	Phosphatidylserine decarb	yes	no	0.449	0.315	0.376	1e-13
Q47VZ2	297	Phosphatidylserine decarb	yes	no	0.426	0.380	0.333	2e-12
Q83AQ4	282	Phosphatidylserine decarb	yes	no	0.407	0.382	0.339	5e-12

>sp|O14333|PSD1_SCHPO Phosphatidylserine decarboxylase proenzyme 1, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=psd1 PE=3 SV=4

 Score =  100 bits (250), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 62/171 (36%), Positives = 97/171 (56%), Gaps = 6/171 (3%)

Query: 48  GSNNSQGNTFLLPGATFATLLMLGALHARRMYDDRKVEEAREKGIEIEFKPDAKASFLRL 107
           G +NS+    ++  A   T + L  L       DR  +  ++KG+++E     +   L  
Sbjct: 22  GKHNSRKRVGIIRLAYGLTGIGLVGLAGFAWAQDRHEKTYQKKGVQVE--GPWQFYVLTT 79

Query: 108 LPLRSISRFWGFLTSVEYPVWMRPYVYKAWARAFHSNLEEA-ALPLGEYASLREFFVRTL 166
           LPLR++SR+WG++  +E P+WMR   +  +++ F  NL EA    + +Y +L EFF R L
Sbjct: 80  LPLRTLSRWWGYVNRIEIPLWMRVPAFGLYSKIFGCNLTEADPDDVRQYKNLAEFFTRKL 139

Query: 167 KQGSRPIDPDPHCLVSPVDGIVLRVGELKGVGAMIEQVKGFSYSVSSLLGS 217
           K G+R IDPD   +V P DG +L  G ++  G  +EQVKG +YS+ +LLG 
Sbjct: 140 KPGARVIDPDA-PIVIPADGKILNYGVIE--GGQLEQVKGITYSLDALLGD 187

May be involved in the regulation of phospholipid biosynthesis and interorganelle trafficking of phosphatidylserine (By similarity). Together with psd1 and psd3, responsible for the majority of phosphatidylethanolamine synthesis.
Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)
EC: 4EC: .EC: 1EC: .EC: 1EC: .EC: 6EC: 5

>sp|P39006|PSD1_YEAST Phosphatidylserine decarboxylase proenzyme 1, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PSD1 PE=1 SV=1

 Score =  100 bits (249), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 48/113 (42%), Positives = 70/113 (61%), Gaps = 1/113 (0%)

Query: 108 LPLRSISRFWGFLTSVEYPVWMRPYVYKAWARAFHSNLEEAALP-LGEYASLREFFVRTL 166
           LPL ++SR WG + S+  P+W+RP+ Y+ ++  F  NL+E   P L  YA+L EFF R +
Sbjct: 132 LPLNAMSRLWGQVNSLTLPIWVRPWGYRLYSFLFGVNLDEMEDPDLTHYANLSEFFYRNI 191

Query: 167 KQGSRPIDPDPHCLVSPVDGIVLRVGELKGVGAMIEQVKGFSYSVSSLLGSSS 219
           K G+RP+      + SP DG +L+VG +      IEQVKG +YS+   LG+ S
Sbjct: 192 KPGTRPVAQGEDVIASPSDGKILQVGIINSETGEIEQVKGMTYSIKEFLGTHS 244

May be involved in the regulation of phospholipid biosynthesis and interorganelle trafficking of phosphatidylserine.

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

EC: 4

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 6

EC: 5

>sp|Q9UG56|PISD_HUMAN Phosphatidylserine decarboxylase proenzyme OS=Homo sapiens GN=PISD PE=2 SV=4

 Score = 88.6 bits (218), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 57/153 (37%), Positives = 83/153 (54%), Gaps = 6/153 (3%)

Query: 67  LLMLGALHARRMYDDRKVEEAREKGIEIEFKPDA--KASFLRLLPLRSISRFWGFLTSVE 124
           L+  G     R Y+  +  E  + G+EI  K     + +  + +P R +SR WG L  VE
Sbjct: 71  LVTGGGYAGYRQYEKYRERELEKLGLEIPPKLAGHWEVALYKSVPTRLLSRAWGRLNQVE 130

Query: 125 YPVWMRPYVYKAWARAFHSNLEEAAL-PLGEYASLREFFVRTLKQGSRPIDPDPHCLVSP 183
            P W+R  VY  +   F  N++EAA+  L  Y +L EFF R LK  +RP+    H ++SP
Sbjct: 131 LPHWLRRPVYSLYIWTFGVNMKEAAVEDLHHYRNLSEFFRRKLKPQARPVC-GLHSVISP 189

Query: 184 VDGIVLRVGELKGVGAMIEQVKGFSYSVSSLLG 216
            DG +L  G++K     +EQVKG +YS+ S LG
Sbjct: 190 SDGRILNFGQVK--NCEVEQVKGVTYSLESFLG 220

Homo sapiens (taxid: 9606)

EC: 4

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 6

EC: 5

>sp|P27465|PISD_CRIGR Phosphatidylserine decarboxylase proenzyme OS=Cricetulus griseus GN=PISD PE=1 SV=2

 Score = 88.6 bits (218), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 54/153 (35%), Positives = 83/153 (54%), Gaps = 6/153 (3%)

Query: 71  GALHARRMYDDRKVEEAREKGIEI--EFKPDAKASFLRLLPLRSISRFWGFLTSVEYPVW 128
           G     R Y+  + ++  + G+EI  +     + +  + +P R +SR WG L  VE P W
Sbjct: 75  GGYAGYRQYEKYRDQKLEKLGLEIPPKLASHWEVALYKSVPTRLLSRAWGRLNQVELPYW 134

Query: 129 MRPYVYKAWARAFHSNLEEAAL-PLGEYASLREFFVRTLKQGSRPIDPDPHCLVSPVDGI 187
           +R  VY  +   F  N+ EAA+  L  Y +L EFF R LK  +RP+    H ++SP DG 
Sbjct: 135 LRRPVYSLYIWTFGVNMTEAAVEDLHHYRNLSEFFRRKLKPQARPVC-GLHSVISPSDGK 193

Query: 188 VLRVGELKGVGAMIEQVKGFSYSVSSLLGSSSF 220
           +L  G++K     +EQVKG +YS+ S LG  ++
Sbjct: 194 ILTFGQVK--NCEVEQVKGVTYSLESFLGPRTY 224

Cricetulus griseus (taxid: 10029)

EC: 4

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 6

EC: 5

>sp|Q5R8I8|PISD_PONAB Phosphatidylserine decarboxylase proenzyme OS=Pongo abelii GN=PISD PE=2 SV=1

 Score = 88.6 bits (218), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 56/149 (37%), Positives = 81/149 (54%), Gaps = 6/149 (4%)

Query: 71  GALHARRMYDDRKVEEAREKGIEIEFKPDA--KASFLRLLPLRSISRFWGFLTSVEYPVW 128
           G     R Y+  +  E  + G+EI  K     + +  + +P R +SR WG L  VE P W
Sbjct: 75  GGYAGYRQYEKYRERELEKLGLEIPPKLAGHWEVALYKSVPTRLLSRAWGRLNQVELPHW 134

Query: 129 MRPYVYKAWARAFHSNLEEAAL-PLGEYASLREFFVRTLKQGSRPIDPDPHCLVSPVDGI 187
           +R  VY  +   F  N++EAA+  L  Y +L EFF R LK  +RP+    H ++SP DG 
Sbjct: 135 LRRPVYSLYIWTFGVNMKEAAVEDLHHYRNLSEFFRRKLKPQARPVC-GLHSVISPSDGR 193

Query: 188 VLRVGELKGVGAMIEQVKGFSYSVSSLLG 216
           +L  G++K     +EQVKG +YS+ S LG
Sbjct: 194 ILNFGQVK--NCEVEQVKGVTYSLESFLG 220

Pongo abelii (taxid: 9601)

EC: 4

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 6

EC: 5

>sp|Q58DH2|PISD_BOVIN Phosphatidylserine decarboxylase proenzyme OS=Bos taurus GN=PISD PE=2 SV=1

 Score = 86.3 bits (212), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 49/124 (39%), Positives = 74/124 (59%), Gaps = 4/124 (3%)

Query: 94  IEFKPDAKASFLRLLPLRSISRFWGFLTSVEYPVWMRPYVYKAWARAFHSNLEEAAL-PL 152
           + ++P ++ +  + +P R +SR WG L  VE P W+R  VY  +   F  N++EAA+  L
Sbjct: 107 VGWRPVSRVALYKSVPTRLLSRAWGRLNQVELPHWLRRPVYSLYIWTFGVNMKEAAVEDL 166

Query: 153 GEYASLREFFVRTLKQGSRPIDPDPHCLVSPVDGIVLRVGELKGVGAMIEQVKGFSYSVS 212
             Y +L EFF R LK  +RP+    H ++SP DG +L  G++K     +EQVKG +YS+ 
Sbjct: 167 HHYRNLSEFFRRKLKPQARPVC-GLHSVISPSDGKILNFGQVK--NCEVEQVKGVTYSLE 223

Query: 213 SLLG 216
           S LG
Sbjct: 224 SFLG 227

Bos taurus (taxid: 9913)

EC: 4

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 6

EC: 5

>sp|Q8BSF4|PISD_MOUSE Phosphatidylserine decarboxylase proenzyme OS=Mus musculus GN=Pisd PE=2 SV=1

 Score = 86.3 bits (212), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 55/149 (36%), Positives = 80/149 (53%), Gaps = 6/149 (4%)

Query: 71  GALHARRMYDDRKVEEAREKGIEI--EFKPDAKASFLRLLPLRSISRFWGFLTSVEYPVW 128
           G     R Y+  +  +  + G+EI  +     + S  + +P R +SR  G L  VE P W
Sbjct: 72  GGYAGYRQYEKYRERKLEKLGLEIPPKLASHWEVSLYKSVPTRLLSRACGRLNQVELPYW 131

Query: 129 MRPYVYKAWARAFHSNLEEAAL-PLGEYASLREFFVRTLKQGSRPIDPDPHCLVSPVDGI 187
           +R  VY  +   F  N+ EAA+  L  Y +L EFF R LK  +RP+    HC+ SP DG 
Sbjct: 132 LRRPVYSLYIWTFGVNMTEAAVEDLHHYRNLSEFFRRKLKPQARPVC-GLHCVTSPSDGK 190

Query: 188 VLRVGELKGVGAMIEQVKGFSYSVSSLLG 216
           +L  G++K   + +EQVKG +YS+ S LG
Sbjct: 191 ILTFGQVK--NSEVEQVKGVTYSLESFLG 217

Mus musculus (taxid: 10090)

EC: 4

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 6

EC: 5

>sp|Q10949|PISD_CAEEL Phosphatidylserine decarboxylase proenzyme OS=Caenorhabditis elegans GN=psd-1 PE=3 SV=2

 Score = 77.4 bits (189), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 47/125 (37%), Positives = 66/125 (52%), Gaps = 6/125 (4%)

Query: 108 LPLRSISRFWGFLTSVEYPVWMRPYVYKAWARAFHSNLEEAALP-LGEYASLREFFVRTL 166
           LP  + SR  G L + E PVW+R ++   +AR +   +++   P    Y S   FF R L
Sbjct: 105 LPFNTASRVIGGLANQEIPVWLREHLLGGFARMYDCRMDDCVDPDFKNYPSFAAFFNRKL 164

Query: 167 KQGSRPIDPDPHCLVSPVDGIVLRVGELKGVGAMIEQVKGFSYSVSSLLGSSSFLPMIEE 226
           K+ +RPI   P  LVSP DG VL  G+++     IE VKG  Y V   LG    LP  +E
Sbjct: 165 KESTRPISASP--LVSPADGTVLHFGKVE--DNKIEYVKGHDYDVDKFLGDVD-LPQKDE 219

Query: 227 GDMHE 231
            D+++
Sbjct: 220 LDLYQ 224

Caenorhabditis elegans (taxid: 6239)

EC: 4

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 6

EC: 5

>sp|Q47VZ2|PSD_COLP3 Phosphatidylserine decarboxylase proenzyme OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=psd PE=3 SV=1

 Score = 72.8 bits (177), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 39/117 (33%), Positives = 67/117 (57%), Gaps = 4/117 (3%)

Query: 101 KASFLRLLPLRSISRFWGFLTSVEYPVWMRPYVYKAWARAFHSNLEEAALP-LGEYASLR 159
           K +F  ++P  +ISR  G L + +   W+   +   + +A+  N+ EA L    ++ +  
Sbjct: 12  KITFQYIMPKHAISRLVGKLAAAKMG-WLTTKLISMFIKAYGINMNEAKLKKASDFDTFN 70

Query: 160 EFFVRTLKQGSRPIDPDPHCLVSPVDGIVLRVGELKGVGAMIEQVKGFSYSVSSLLG 216
            FF R L++G+R ID D + +  PVDG + + G++  +   + Q KGF+YSV+SLLG
Sbjct: 71  NFFTRELEEGARIIDNDENTICYPVDGAISQQGDI--IDGQLIQAKGFNYSVTSLLG 125

Colwellia psychrerythraea (strain 34H / ATCC BAA-681) (taxid: 167879)

EC: 4

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 6

EC: 5

>sp|Q83AQ4|PSD_COXBU Phosphatidylserine decarboxylase proenzyme OS=Coxiella burnetii (strain RSA 493 / Nine Mile phase I) GN=psd PE=3 SV=1

 Score = 71.6 bits (174), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 38/112 (33%), Positives = 67/112 (59%), Gaps = 4/112 (3%)

Query: 106 RLLPLRSISRFWGFLTSVEYPVWMRPYVYKAWARAFHSNLEEAALP-LGEYASLREFFVR 164
           + LP R++S+  G+L + E+ + +  +  + + R +  N++EA  P +G Y S   FF R
Sbjct: 6   KYLPQRTLSKIVGWLATREWGL-LTQWAIRLFIRHYGINMQEAQYPDIGHYPSFNAFFTR 64

Query: 165 TLKQGSRPIDPDPHCLVSPVDGIVLRVGELKGVGAMIEQVKGFSYSVSSLLG 216
            LK+  RP+  +P  + SPVDGI+  +G++KG   +  Q K   Y++++LLG
Sbjct: 65  YLKRELRPVVEEPRAIASPVDGIISEMGQIKGENLI--QAKNHHYTITALLG 114

Coxiella burnetii (strain RSA 493 / Nine Mile phase I) (taxid: 227377)

EC: 4

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 6

EC: 5

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	265
224074169	444	predicted protein [Populus trichocarpa]	0.988	0.590	0.752	1e-106
255579633	420	phosphatidylserine decarboxylase, putati	0.988	0.623	0.709	1e-100
359495988	436	PREDICTED: LOW QUALITY PROTEIN: phosphat	0.954	0.580	0.693	2e-94
297744390	427	unnamed protein product [Vitis vinifera]	0.954	0.592	0.693	2e-94
358248866	435	uncharacterized protein LOC100811372 [Gl	0.969	0.590	0.672	2e-93
449469379	442	PREDICTED: phosphatidylserine decarboxyl	0.992	0.595	0.634	1e-88
350534910	445	phosphatidylserine decarboxylase [Solanu	0.992	0.591	0.643	3e-82
116788855	458	unknown [Picea sitchensis]	0.924	0.534	0.595	1e-79
42566885	453	phosphatidylserine decarboxylase [Arabid	0.969	0.567	0.589	1e-79
297800446	451	predicted protein [Arabidopsis lyrata su	0.969	0.569	0.586	2e-78

>gi|224074169|ref|XP_002304284.1| predicted protein [Populus trichocarpa] gi|222841716|gb|EEE79263.1| predicted protein [Populus trichocarpa]

 Score =  390 bits (1003), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 198/263 (75%), Positives = 224/263 (85%), Gaps = 1/263 (0%)

Query: 1   MKFRFSNKVSVFPHYLRLEYDHHCR-QFSTSFLRKLQTNPQVRASFSGGSNNSQGNTFLL 59
           MKFR+SNK+ +F H LRL + HH R QF TS L+++QT  QVRASF+G S N +GN FL+
Sbjct: 1   MKFRYSNKLPIFAHSLRLSHQHHQRRQFFTSLLKRVQTASQVRASFNGSSGNPRGNIFLV 60

Query: 60  PGATFATLLMLGALHARRMYDDRKVEEAREKGIEIEFKPDAKASFLRLLPLRSISRFWGF 119
           PGAT ATLLMLGALHARR+YDD+KVEEAREKGIE EF+PD KASFLR+LPLRSISR +G 
Sbjct: 61  PGATVATLLMLGALHARRLYDDKKVEEAREKGIEFEFQPDHKASFLRMLPLRSISRLFGS 120

Query: 120 LTSVEYPVWMRPYVYKAWARAFHSNLEEAALPLGEYASLREFFVRTLKQGSRPIDPDPHC 179
           LTSVE PVWMRP+VY+AWARAFHSNLEE ALPL  YASLREFFVRTLK+GSRPIDPDPHC
Sbjct: 121 LTSVELPVWMRPHVYRAWARAFHSNLEEVALPLENYASLREFFVRTLKEGSRPIDPDPHC 180

Query: 180 LVSPVDGIVLRVGELKGVGAMIEQVKGFSYSVSSLLGSSSFLPMIEEGDMHEQCGEQESS 239
           LVSPVDG VLR GELKG G MIEQVKGFSYSVSSLLG+SS LP+I EGDMH++  EQ+ +
Sbjct: 181 LVSPVDGTVLRFGELKGSGTMIEQVKGFSYSVSSLLGASSLLPVITEGDMHKESSEQQGN 240

Query: 240 PTEKTKKSWWSISLASPRVRDTA 262
             EK KKSWW  SLASP++RDT 
Sbjct: 241 LKEKNKKSWWRFSLASPKIRDTV 263

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255579633|ref|XP_002530657.1| phosphatidylserine decarboxylase, putative [Ricinus communis] gi|223529790|gb|EEF31726.1| phosphatidylserine decarboxylase, putative [Ricinus communis]

 Score =  371 bits (953), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 188/265 (70%), Positives = 218/265 (82%), Gaps = 3/265 (1%)

Query: 1   MKFRFSNKVSVFPHYLRLEY-DHHCRQFSTSFLRKLQTNPQVRASFSGGSNNSQGNT--F 57
           MKFRFS KV + PH LRL +  +H RQ  TSFL+K+QT  Q RASF+G  +++       
Sbjct: 1   MKFRFSQKVPIIPHNLRLNHHQYHQRQLFTSFLKKVQTASQARASFNGSGSSNNSQGSHL 60

Query: 58  LLPGATFATLLMLGALHARRMYDDRKVEEAREKGIEIEFKPDAKASFLRLLPLRSISRFW 117
           LLPGAT AT+LMLGALHARR+Y+D+K EEAREKGIEIEF+PD KA+FLR+LPLRSISRFW
Sbjct: 61  LLPGATVATILMLGALHARRLYEDKKTEEAREKGIEIEFQPDFKATFLRMLPLRSISRFW 120

Query: 118 GFLTSVEYPVWMRPYVYKAWARAFHSNLEEAALPLGEYASLREFFVRTLKQGSRPIDPDP 177
           G LT+VE P W+RPYVY++WARAFHSNLEEAALPL  YASLREFFVR LK+GSRPIDPDP
Sbjct: 121 GTLTNVELPPWVRPYVYRSWARAFHSNLEEAALPLDRYASLREFFVRGLKEGSRPIDPDP 180

Query: 178 HCLVSPVDGIVLRVGELKGVGAMIEQVKGFSYSVSSLLGSSSFLPMIEEGDMHEQCGEQE 237
           HCLVSPVDG +LR GELKG GAMIEQVKG SYSVS+LLG+SSFLPMI EGD+ E+  EQ+
Sbjct: 181 HCLVSPVDGTILRFGELKGSGAMIEQVKGHSYSVSTLLGASSFLPMIAEGDICEERSEQQ 240

Query: 238 SSPTEKTKKSWWSISLASPRVRDTA 262
           S+  E  KKSWW ISLA P+VR+  
Sbjct: 241 SNLEENNKKSWWRISLAFPKVRENV 265

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359495988|ref|XP_002266091.2| PREDICTED: LOW QUALITY PROTEIN: phosphatidylserine decarboxylase proenzyme 1, mitochondrial-like [Vitis vinifera]

 Score =  351 bits (901), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 181/261 (69%), Positives = 217/261 (83%), Gaps = 8/261 (3%)

Query: 1   MKFRFSNKVSVFPHYLRLEYDH-HCRQFSTSFLRKLQTNPQVRASFSGGSNNSQGNTFLL 59
           MKFR S K  +F H   L + H H      SF+RKLQT+   RAS +GGS++SQGN+FL+
Sbjct: 1   MKFRVSQKFPMFIHQATLNHRHLHL----ISFVRKLQTS---RASVNGGSSSSQGNSFLV 53

Query: 60  PGATFATLLMLGALHARRMYDDRKVEEAREKGIEIEFKPDAKASFLRLLPLRSISRFWGF 119
           PGAT AT+LMLGALHARR+YDD+KVE+AREKG+E EF PD KA+FL+LLPLRSISR+WG 
Sbjct: 54  PGATVATILMLGALHARRLYDDKKVEDAREKGLEFEFHPDVKATFLQLLPLRSISRYWGL 113

Query: 120 LTSVEYPVWMRPYVYKAWARAFHSNLEEAALPLGEYASLREFFVRTLKQGSRPIDPDPHC 179
           LTSVE PVW+RPYVY+AWARAFHSNLEEAA+PL EYA+LR+FFVR+LK+GSRPIDPDP C
Sbjct: 114 LTSVEIPVWLRPYVYRAWARAFHSNLEEAAMPLDEYATLRDFFVRSLKEGSRPIDPDPRC 173

Query: 180 LVSPVDGIVLRVGELKGVGAMIEQVKGFSYSVSSLLGSSSFLPMIEEGDMHEQCGEQESS 239
           LVSPVDGI+LR GELK  GAMIEQVKGFSYSVSSLLG++S LPMI E + H +  E E++
Sbjct: 174 LVSPVDGIILRFGELKAAGAMIEQVKGFSYSVSSLLGANSLLPMITEENTHAESSELENT 233

Query: 240 PTEKTKKSWWSISLASPRVRD 260
           P +++ KSWW +SLASP+V D
Sbjct: 234 PKDQSNKSWWRVSLASPKVWD 254

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297744390|emb|CBI37364.3| unnamed protein product [Vitis vinifera]

 Score =  350 bits (899), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 181/261 (69%), Positives = 217/261 (83%), Gaps = 8/261 (3%)

Query: 1   MKFRFSNKVSVFPHYLRLEYDH-HCRQFSTSFLRKLQTNPQVRASFSGGSNNSQGNTFLL 59
           MKFR S K  +F H   L + H H      SF+RKLQT+   RAS +GGS++SQGN+FL+
Sbjct: 1   MKFRVSQKFPMFIHQATLNHRHLHL----ISFVRKLQTS---RASVNGGSSSSQGNSFLV 53

Query: 60  PGATFATLLMLGALHARRMYDDRKVEEAREKGIEIEFKPDAKASFLRLLPLRSISRFWGF 119
           PGAT AT+LMLGALHARR+YDD+KVE+AREKG+E EF PD KA+FL+LLPLRSISR+WG 
Sbjct: 54  PGATVATILMLGALHARRLYDDKKVEDAREKGLEFEFHPDVKATFLQLLPLRSISRYWGL 113

Query: 120 LTSVEYPVWMRPYVYKAWARAFHSNLEEAALPLGEYASLREFFVRTLKQGSRPIDPDPHC 179
           LTSVE PVW+RPYVY+AWARAFHSNLEEAA+PL EYA+LR+FFVR+LK+GSRPIDPDP C
Sbjct: 114 LTSVEIPVWLRPYVYRAWARAFHSNLEEAAMPLDEYATLRDFFVRSLKEGSRPIDPDPRC 173

Query: 180 LVSPVDGIVLRVGELKGVGAMIEQVKGFSYSVSSLLGSSSFLPMIEEGDMHEQCGEQESS 239
           LVSPVDGI+LR GELK  GAMIEQVKGFSYSVSSLLG++S LPMI E + H +  E E++
Sbjct: 174 LVSPVDGIILRFGELKAAGAMIEQVKGFSYSVSSLLGANSLLPMITEENTHAESSELENT 233

Query: 240 PTEKTKKSWWSISLASPRVRD 260
           P +++ KSWW +SLASP+V D
Sbjct: 234 PKDQSNKSWWRVSLASPKVWD 254

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|358248866|ref|NP_001240209.1| uncharacterized protein LOC100811372 [Glycine max] gi|255644593|gb|ACU22799.1| unknown [Glycine max]

 Score =  348 bits (892), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 179/266 (67%), Positives = 215/266 (80%), Gaps = 9/266 (3%)

Query: 1   MKFRFSNKVSVFPHYLRLEYDHHCRQFSTSFLRKLQTNPQVRASF-SGGSNNSQGNTFLL 59
           MK+R S+K  V P + R    +H R F TSF +K QT PQ RAS  +GGS NSQGN+F++
Sbjct: 1   MKYRVSHKFPVLPRHTRP--FNHTRYF-TSFAKKFQT-PQPRASINAGGSGNSQGNSFVV 56

Query: 60  PGATFATLLMLGALHARRMYDDRKVEEAREKGIEIEFKPDAKASFLRLLPLRSISRFWGF 119
           PGAT AT+LMLG LHARR+Y+D+K E+ +EKGIEIEF+PDAKA+FLRLLPLRSISR WG+
Sbjct: 57  PGATVATILMLGVLHARRLYEDKKTEQMKEKGIEIEFQPDAKATFLRLLPLRSISRCWGY 116

Query: 120 LTSVEYPVWMRPYVYKAWARAFHSNLEEAALPLGEYASLREFFVRTLKQGSRPIDPDPHC 179
           LTS+E PVW+RP++YKAWARAFHSNLEEAALPL +YASLR+FFVRTLK+GSRPID DP C
Sbjct: 117 LTSMEIPVWLRPHIYKAWARAFHSNLEEAALPLDKYASLRDFFVRTLKEGSRPIDVDPQC 176

Query: 180 LVSPVDGIVLRVGELKGVGAMIEQVKGFSYSVSSLLGSSSFLPMIEEGDMHEQCGEQESS 239
           LVSPVDG VLR GELKG GAMIEQ+KGFSYSV SLLG+S FLP     D+ E+  E  ++
Sbjct: 177 LVSPVDGTVLRFGELKGAGAMIEQIKGFSYSVFSLLGASPFLPTT---DVQEEHSESITT 233

Query: 240 PTEKTKKSWWSISLASPRVRDTAITR 265
            T K+KKSWW +SLASP+V +   +R
Sbjct: 234 -TVKSKKSWWRVSLASPKVWNPTSSR 258

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449469379|ref|XP_004152398.1| PREDICTED: phosphatidylserine decarboxylase proenzyme-like [Cucumis sativus] gi|449488662|ref|XP_004158135.1| PREDICTED: phosphatidylserine decarboxylase proenzyme-like [Cucumis sativus]

 Score =  332 bits (850), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 170/268 (63%), Positives = 206/268 (76%), Gaps = 5/268 (1%)

Query: 1   MKFRFSNKVSVFPH---YLRLEYDHHCRQFSTSFLRKLQTNPQVRASFSGGSNNSQGNT- 56
           MKFR  N++ + P    Y      +H R F++ F R+ QT+ Q RAS  GG+ +S     
Sbjct: 1   MKFRAPNRIFILPSTSSYFNSSLRNHNRSFASVF-RRFQTSLQARASVGGGNGSSSQGDS 59

Query: 57  FLLPGATFATLLMLGALHARRMYDDRKVEEAREKGIEIEFKPDAKASFLRLLPLRSISRF 116
           +L+PGAT ATLLMLGALHARR+YDD+KVEEARE+GIE EFK D KA+FLRL+PLR +SR 
Sbjct: 60  YLVPGATVATLLMLGALHARRLYDDKKVEEARERGIEPEFKSDIKATFLRLIPLRLVSRC 119

Query: 117 WGFLTSVEYPVWMRPYVYKAWARAFHSNLEEAALPLGEYASLREFFVRTLKQGSRPIDPD 176
           WG +T+VE P+W+RPYV++AWARAFHSNLEE ALPL EYASLREFFVR+LK+G RPIDPD
Sbjct: 120 WGHITNVELPIWLRPYVHRAWARAFHSNLEEVALPLDEYASLREFFVRSLKEGCRPIDPD 179

Query: 177 PHCLVSPVDGIVLRVGELKGVGAMIEQVKGFSYSVSSLLGSSSFLPMIEEGDMHEQCGEQ 236
             CLVSPVDG VLR GELKG GAMIEQVKGFSYSV++LLG+ S LPM+  GD +E+   Q
Sbjct: 180 LQCLVSPVDGTVLRFGELKGAGAMIEQVKGFSYSVAALLGTGSLLPMMAAGDGNEEGSGQ 239

Query: 237 ESSPTEKTKKSWWSISLASPRVRDTAIT 264
           E+S T+  K+SWW ISLA P+V D   T
Sbjct: 240 ENSSTDSGKRSWWKISLAYPKVLDPVST 267

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|350534910|ref|NP_001234166.1| phosphatidylserine decarboxylase [Solanum lycopersicum] gi|29465780|gb|AAM11886.1| phosphatidylserine decarboxylase [Solanum lycopersicum]

 Score =  311 bits (796), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 173/269 (64%), Positives = 206/269 (76%), Gaps = 6/269 (2%)

Query: 1   MKFRFSNKVSVFPHYLRLEYDHHCRQFSTSFLRKLQTNPQVRASFSGGSNNSQGN----T 56
           MKFR S ++  F +  R  + H  R   T+FLRK+Q   + RAS + G ++S  +    T
Sbjct: 1   MKFRASQRIPCFTYNGRFSHLHAQRFHFTTFLRKVQAT-EARASLNRGGSSSNSSSQGNT 59

Query: 57  FLLPGATFATLLMLGALHARRMYDDRKVEEAREKGIEIEFKPDAKASFLRLLPLRSISRF 116
            LLPGAT AT++MLG LHARR+YDD+K+E+AREKGI +EF+PD KA+F+RLLPLRSISRF
Sbjct: 60  LLLPGATVATIVMLGLLHARRLYDDQKIEDAREKGI-LEFQPDVKATFMRLLPLRSISRF 118

Query: 117 WGFLTSVEYPVWMRPYVYKAWARAFHSNLEEAALPLGEYASLREFFVRTLKQGSRPIDPD 176
           WG LT+VE P+W+RP VYK WARAFHSNLEE ALPL EYASLREFFVR LK+G+RPIDPD
Sbjct: 119 WGTLTNVELPMWLRPSVYKGWARAFHSNLEEVALPLEEYASLREFFVRRLKEGTRPIDPD 178

Query: 177 PHCLVSPVDGIVLRVGELKGVGAMIEQVKGFSYSVSSLLGSSSFLPMIEEGDMHEQCGEQ 236
           P CL+SPVDG VL+ GELK VGAMIEQVKGFSYSVSSLLG+SS LPM    D   Q G Q
Sbjct: 179 PCCLISPVDGTVLQFGELKEVGAMIEQVKGFSYSVSSLLGASSLLPMNVVDDNTNQDGGQ 238

Query: 237 ESSPTEKTKKSWWSISLASPRVRDTAITR 265
           E S  +  +KSWW +SLASP+VRD A  R
Sbjct: 239 EGSMDDTNQKSWWRVSLASPKVRDPAPAR 267

Source: Solanum lycopersicum

Species: Solanum lycopersicum

Genus: Solanum

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|116788855|gb|ABK25027.1| unknown [Picea sitchensis]

 Score =  302 bits (773), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 147/247 (59%), Positives = 184/247 (74%), Gaps = 2/247 (0%)

Query: 13  PHYLRLEYDHHCRQFSTSFLRKLQTNPQVRASFSGGSNNSQGNTFLLPGATFATLLMLGA 72
           P  + L     CR F  S LR         AS +GG      N FL+PGAT AT++MLG 
Sbjct: 25  PQRIYLNNQPRCRSFMNS-LRGRDFKAAAGASQTGGGE-GDANQFLIPGATIATIVMLGV 82

Query: 73  LHARRMYDDRKVEEAREKGIEIEFKPDAKASFLRLLPLRSISRFWGFLTSVEYPVWMRPY 132
           LHARR+Y+D+K+EEAREKGIE+EF PD KA+FL+++PLRSISR WG +T+VE PVW+RP+
Sbjct: 83  LHARRLYEDKKMEEAREKGIELEFLPDMKATFLKMVPLRSISRAWGLVTAVELPVWLRPF 142

Query: 133 VYKAWARAFHSNLEEAALPLGEYASLREFFVRTLKQGSRPIDPDPHCLVSPVDGIVLRVG 192
           +Y++WARAFHSN+ EAA PL EYASLREFFVRTLK+GSRP+D DP CLVSPVDGI+LRVG
Sbjct: 143 IYRSWARAFHSNISEAAQPLEEYASLREFFVRTLKEGSRPLDQDPKCLVSPVDGIILRVG 202

Query: 193 ELKGVGAMIEQVKGFSYSVSSLLGSSSFLPMIEEGDMHEQCGEQESSPTEKTKKSWWSIS 252
           +LKG GAMIEQVKGFSYS  SLLGS S LP+ +  ++  +  EQ+       ++SWW +S
Sbjct: 203 QLKGPGAMIEQVKGFSYSALSLLGSRSVLPISDSQEVLAEQYEQKQVRRNLNQRSWWRVS 262

Query: 253 LASPRVR 259
             +P+VR
Sbjct: 263 WIAPKVR 269

Source: Picea sitchensis

Species: Picea sitchensis

Genus: Picea

Family: Pinaceae

Order: Coniferales

Class: Coniferopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|42566885|ref|NP_193403.2| phosphatidylserine decarboxylase [Arabidopsis thaliana] gi|29468598|gb|AAO38842.1| phosphatidylserine decarboxylase [Arabidopsis thaliana] gi|109946625|gb|ABG48491.1| At4g16700 [Arabidopsis thaliana] gi|332658388|gb|AEE83788.1| phosphatidylserine decarboxylase [Arabidopsis thaliana]

 Score =  301 bits (772), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 162/275 (58%), Positives = 195/275 (70%), Gaps = 18/275 (6%)

Query: 1   MKFRFSNKVSVFPHYLRLE-YDHHCRQFSTSFLRKLQTN-PQVRAS------------FS 46
           MK RF   V     Y  L  + H  R+  +SFL  +++N    RAS              
Sbjct: 1   MKPRFPQNVYFLARYSYLRRFQHSQRRTFSSFLNNIRSNYSGARASPLGGSSGAGAGAGG 60

Query: 47  GGSNNSQGNTFLLPGATFATLLMLGALHARRMYDDRKVEEAREKGIEIEFKPDAKASFLR 106
           GG+ +S+GN FL+PGAT AT+LMLGALHARR+Y+D+K+EE REKGIE+EF PD KASFL 
Sbjct: 61  GGTGDSKGNAFLVPGATMATILMLGALHARRLYEDKKIEEKREKGIELEFHPDIKASFLG 120

Query: 107 LLPLRSISRFWGFLTSVEYPVWMRPYVYKAWARAFHSNLEEAALPLGEYASLREFFVRTL 166
           +LPLRSISR WG   S+E PVWMRPY YKAWARAFHSNLEEAALPL EY SL++FFVR+L
Sbjct: 121 VLPLRSISRAWGSFMSLEIPVWMRPYAYKAWARAFHSNLEEAALPLEEYTSLQDFFVRSL 180

Query: 167 KQGSRPIDPDPHCLVSPVDGIVLRVGELKGVGAMIEQVKGFSYSVSSLLGSSSFLPMIEE 226
           K+G RPIDPDP CLVSPVDG VLR GELKG   MIEQVKG SYSV +LLG++S LPM  E
Sbjct: 181 KEGCRPIDPDPCCLVSPVDGTVLRFGELKGNRGMIEQVKGHSYSVPALLGNNSLLPMEPE 240

Query: 227 GDMHEQCGEQESSPTEKTKKSWWSISLASPRVRDT 261
           G        +E +  +K+ KSW  +SLASP++R+ 
Sbjct: 241 GKNE----SKEEAVGDKSDKSWLRVSLASPKLREN 271

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297800446|ref|XP_002868107.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297313943|gb|EFH44366.1| predicted protein [Arabidopsis lyrata subsp. lyrata]

 Score =  298 bits (763), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 160/273 (58%), Positives = 196/273 (71%), Gaps = 16/273 (5%)

Query: 1   MKFRFSNKVSVFPHYLRLEYDHHC-RQFSTSFLRKLQTN-----------PQVRASFSGG 48
           MK RFS+       Y  L   HH  R+  +SFL  +++N                   GG
Sbjct: 1   MKPRFSHNAYFLARYSHLRRFHHSHRRTFSSFLNNIRSNYYGTSASSLGGSSGAGGGGGG 60

Query: 49  SNNSQGNTFLLPGATFATLLMLGALHARRMYDDRKVEEAREKGIEIEFKPDAKASFLRLL 108
           + +S+GN FLLPGAT AT+LMLGALHARR+Y+D+K+EE RE+GIE+EF PD KASFL +L
Sbjct: 61  TGDSKGNAFLLPGATMATILMLGALHARRLYEDKKIEEKRERGIELEFHPDVKASFLGIL 120

Query: 109 PLRSISRFWGFLTSVEYPVWMRPYVYKAWARAFHSNLEEAALPLGEYASLREFFVRTLKQ 168
           PLRSISR WG + S+E PVWMRPY YKAWARAFHSNLEEAALPL EYASL++FFVR+LK+
Sbjct: 121 PLRSISRAWGSIMSLEIPVWMRPYAYKAWARAFHSNLEEAALPLKEYASLQDFFVRSLKE 180

Query: 169 GSRPIDPDPHCLVSPVDGIVLRVGELKGVGAMIEQVKGFSYSVSSLLGSSSFLPMIEEGD 228
           G RPIDPDP CLVSPVDG +LR GELKG   MIEQVKG SYSV +LLG++S LPM  EG 
Sbjct: 181 GCRPIDPDPCCLVSPVDGTILRFGELKGSRGMIEQVKGHSYSVPALLGNNSLLPMEPEG- 239

Query: 229 MHEQCGEQESSPTEKTKKSWWSISLASPRVRDT 261
              +   +E +  +K+ KSW  +SLASP++R+ 
Sbjct: 240 ---KDESEEEAVGDKSHKSWLRVSLASPKLREN 269

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	265
TAIR|locus:2129046	453	PSD1 "phosphatidylserine decar	0.966	0.565	0.540	4.5e-66
POMBASE|SPBC16E9.18	437	psd1 "phosphatidylserine decar	0.452	0.274	0.396	2.5e-17
UNIPROTKB|E2RN04	409	PISD "Uncharacterized protein"	0.667	0.432	0.345	3.3e-17
ASPGD|ASPL0000056138	547	AN0910 [Emericella nidulans (t	0.509	0.246	0.355	2e-16
SGD|S000005113	500	PSD1 "Phosphatidylserine decar	0.369	0.196	0.424	4.4e-16
ZFIN|ZDB-GENE-061215-46	426	pisd "phosphatidylserine decar	0.415	0.258	0.377	4.8e-16
UNIPROTKB|H0Y7P7	362	PISD "Phosphatidylserine decar	0.513	0.375	0.370	1.3e-15
UNIPROTKB|G4MPS4	536	MGG_09213 "Phosphatidylserine	0.403	0.199	0.392	1.5e-15
UNIPROTKB|Q9UG56	409	PISD "Phosphatidylserine decar	0.513	0.332	0.370	1.9e-15
UNIPROTKB|A8E4Q4	280	PISD "Phosphatidylserine decar	0.679	0.642	0.303	2.6e-15

TAIR|locus:2129046 PSD1 "phosphatidylserine decarboxylase 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 672 (241.6 bits), Expect = 4.5e-66, P = 4.5e-66
 Identities = 148/274 (54%), Positives = 176/274 (64%)

Query:     1 MKFRFSNKVSVFPHYLRLE-YDHHCRQFSTSFLRKLQTNPQ-VRASFXXXXXXXXXXT-- 56
             MK RF   V     Y  L  + H  R+  +SFL  +++N    RAS              
Sbjct:     1 MKPRFPQNVYFLARYSYLRRFQHSQRRTFSSFLNNIRSNYSGARASPLGGSSGAGAGAGG 60

Query:    57 ----------FLLPGATFATLLMLGALHARRMYDDRKVEEAREKGIEIEFKPDAKASFLR 106
                       FL+PGAT AT+LMLGALHARR+Y+D+K+EE REKGIE+EF PD KASFL 
Sbjct:    61 GGTGDSKGNAFLVPGATMATILMLGALHARRLYEDKKIEEKREKGIELEFHPDIKASFLG 120

Query:   107 LLPLRSISRFWGFLTSVEYPVWMRPYVYKAWARAFHSNLEEAALPLGEYASLREFFVRTL 166
             +LPLRSISR WG   S+E PVWMRPY YKAWARAFHSNLEEAALPL EY SL++FFVR+L
Sbjct:   121 VLPLRSISRAWGSFMSLEIPVWMRPYAYKAWARAFHSNLEEAALPLEEYTSLQDFFVRSL 180

Query:   167 KQGSRPIDPDPHCLVSPVDGIVLRVGELKGVGAMIEQVKXXXXXXXXXXXXXXXXPMIEE 226
             K+G RPIDPDP CLVSPVDG VLR GELKG   MIEQVK                PM  E
Sbjct:   181 KEGCRPIDPDPCCLVSPVDGTVLRFGELKGNRGMIEQVKGHSYSVPALLGNNSLLPMEPE 240

Query:   227 GDMHEQCGEQESSPTEKTKKSWWSISLASPRVRD 260
             G  +E    +E +  +K+ KSW  +SLASP++R+
Sbjct:   241 GK-NES---KEEAVGDKSDKSWLRVSLASPKLRE 270

GO:0004609 "phosphatidylserine decarboxylase activity" evidence=IEA;ISS;IMP

GO:0005739 "mitochondrion" evidence=ISM;IDA

GO:0008654 "phospholipid biosynthetic process" evidence=IEA

POMBASE|SPBC16E9.18 psd1 "phosphatidylserine decarboxylase Psd1" [Schizosaccharomyces pombe (taxid:4896)]

 Score = 218 (81.8 bits), Expect = 2.5e-17, P = 2.5e-17
 Identities = 50/126 (39%), Positives = 77/126 (61%)

Query:    81 DRKVEEAREKGIEIEFKPDAKASFLRLLPLRSISRFWGFLTSVEYPVWMRPYVYKAWARA 140
             DR  +  ++KG+++E  P  +   L  LPLR++SR+WG++  +E P+WMR   +  +++ 
Sbjct:    55 DRHEKTYQKKGVQVE-GP-WQFYVLTTLPLRTLSRWWGYVNRIEIPLWMRVPAFGLYSKI 112

Query:   141 FHSNLEEAALP-LGEYASLREFFVRTLKQGSRPIDPDPHCLVSPVDGIVLRVGELKGVGA 199
             F  NL EA    + +Y +L EFF R LK G+R IDPD   +V P DG +L  G ++G   
Sbjct:   113 FGCNLTEADPDDVRQYKNLAEFFTRKLKPGARVIDPDAP-IVIPADGKILNYGVIEG--G 169

Query:   200 MIEQVK 205
              +EQVK
Sbjct:   170 QLEQVK 175

GO:0004609 "phosphatidylserine decarboxylase activity" evidence=IGI

GO:0005739 "mitochondrion" evidence=IDA

GO:0005743 "mitochondrial inner membrane" evidence=ISS

GO:0006646 "phosphatidylethanolamine biosynthetic process" evidence=IGI

GO:0006656 "phosphatidylcholine biosynthetic process" evidence=ISS

UNIPROTKB|E2RN04 PISD "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 216 (81.1 bits), Expect = 3.3e-17, P = 3.3e-17
 Identities = 66/191 (34%), Positives = 96/191 (50%)

Query:    23 HCRQFSTS-FLRKLQTNPQVRASFXXXX---XXXXXXTFLLPGATFATLLMLGALHAR-R 77
             HC   + S FL+ L+  P VRA +              FLL       LL+ G+ +A  R
Sbjct:    25 HCENTTMSHFLQPLRKLP-VRAFYTNARRVHTASARTLFLL--RPLPILLVTGSGYAGYR 81

Query:    78 MYDDRKVEEAREKGIEIEFKPDA--KASFLRLLPLRSISRFWGFLTSVEYPVWMRPYVYK 135
              Y+  +  E  + G+EI  K     + +  + +P R +SR WG L  VE P W+R  VY 
Sbjct:    82 QYEKYRERELEKLGLEIPPKLAGHWEVALYKSVPTRLLSRAWGRLNQVELPHWLRRPVYS 141

Query:   136 AWARAFHSNLEEAALP-LGEYASLREFFVRTLKQGSRPIDPDPHCLVSPVDGIVLRVGEL 194
              +   F  N++EAA+  L  Y +L EFF R LK  +RP+    H ++SP DG +L  G++
Sbjct:   142 LYIWTFGVNMKEAAVEDLHHYRNLSEFFRRKLKPQARPVC-GLHSVISPSDGKILNFGQV 200

Query:   195 KGVGAMIEQVK 205
             K     +EQVK
Sbjct:   201 KN--CEVEQVK 209

GO:0005634 "nucleus" evidence=IEA

GO:0008654 "phospholipid biosynthetic process" evidence=IEA

GO:0004609 "phosphatidylserine decarboxylase activity" evidence=IEA

ASPGD|ASPL0000056138 AN0910 [Emericella nidulans (taxid:162425)]

 Score = 212 (79.7 bits), Expect = 2.0e-16, P = 2.0e-16
 Identities = 54/152 (35%), Positives = 82/152 (53%)

Query:    69 MLGALHARRMYDDRKVEEAREK---GIEIEF-KPDAK----------ASFLRLLPLRSIS 114
             +LG LH  +   + ++ + RE    G   +F KP  +             +  LPL+++S
Sbjct:    92 LLGILHYYKSQRNERIRQEREAEAAGESFDFSKPPPRPKIRPSGPWQVQIMSTLPLKAMS 151

Query:   115 RFWGFLTSVEYPVWMRPYVYKAWARAFHSNLEEAALP-LGEYASLREFFVRTLKQGSRPI 173
             R WG    +E P ++R   +K ++  F  NL+E A P L  Y +L  FF R LK G RP+
Sbjct:   152 RLWGRFNEIELPYYLRVPGFKLYSWIFGVNLDEVAEPDLHVYPNLAAFFYRKLKPGVRPL 211

Query:   174 DPDPHCLVSPVDGIVLRVGELKGVGAMIEQVK 205
             DPDPH ++SP DG +L+ G ++  G  +EQVK
Sbjct:   212 DPDPHAILSPSDGRILQFGLIER-GE-VEQVK 241

GO:0006644 "phospholipid metabolic process" evidence=RCA

GO:0004609 "phosphatidylserine decarboxylase activity" evidence=IEA;RCA

GO:0005739 "mitochondrion" evidence=IEA

GO:0006646 "phosphatidylethanolamine biosynthetic process" evidence=IEA

GO:0006656 "phosphatidylcholine biosynthetic process" evidence=IEA

SGD|S000005113 PSD1 "Phosphatidylserine decarboxylase of the mitochondrial inner membrane" [Saccharomyces cerevisiae (taxid:4932)]

 Score = 208 (78.3 bits), Expect = 4.4e-16, P = 4.4e-16
 Identities = 42/99 (42%), Positives = 61/99 (61%)

Query:   108 LPLRSISRFWGFLTSVEYPVWMRPYVYKAWARAFHSNLEEAALP-LGEYASLREFFVRTL 166
             LPL ++SR WG + S+  P+W+RP+ Y+ ++  F  NL+E   P L  YA+L EFF R +
Sbjct:   132 LPLNAMSRLWGQVNSLTLPIWVRPWGYRLYSFLFGVNLDEMEDPDLTHYANLSEFFYRNI 191

Query:   167 KQGSRPIDPDPHCLVSPVDGIVLRVGELKGVGAMIEQVK 205
             K G+RP+      + SP DG +L+VG +      IEQVK
Sbjct:   192 KPGTRPVAQGEDVIASPSDGKILQVGIINSETGEIEQVK 230

GO:0004609 "phosphatidylserine decarboxylase activity" evidence=IEA;IMP

GO:0005739 "mitochondrion" evidence=IEA;IDA

GO:0016831 "carboxy-lyase activity" evidence=IEA

GO:0008654 "phospholipid biosynthetic process" evidence=IEA

GO:0005743 "mitochondrial inner membrane" evidence=IEA

GO:0006646 "phosphatidylethanolamine biosynthetic process" evidence=IEA

GO:0006656 "phosphatidylcholine biosynthetic process" evidence=IDA

GO:0006629 "lipid metabolic process" evidence=IEA

GO:0031305 "integral to mitochondrial inner membrane" evidence=IDA

GO:0016829 "lyase activity" evidence=IEA

GO:0016020 "membrane" evidence=IEA

ZFIN|ZDB-GENE-061215-46 pisd "phosphatidylserine decarboxylase" [Danio rerio (taxid:7955)]

 Score = 206 (77.6 bits), Expect = 4.8e-16, P = 4.8e-16
 Identities = 43/114 (37%), Positives = 67/114 (58%)

Query:    93 EIEFKPDAKASFLRLLPLRSISRFWGFLTSVEYPVWMRPYVYKAWARAFHSNLEEAALP- 151
             ++ ++P ++ +  + +P R +SR WG L  V+ P W+R  +Y  +   F  N++EAA+  
Sbjct:   115 KVGWRPTSRVTIYKTIPTRLLSRAWGRLNRVDLPNWLRKPIYNLYIWTFGVNMKEAAVED 174

Query:   152 LGEYASLREFFVRTLKQGSRPIDPDPHCLVSPVDGIVLRVGELKGVGAMIEQVK 205
             L  Y +L EFF R LK   RP+  D HC++SP DG +L  G +K     +EQVK
Sbjct:   175 LQHYRNLGEFFRRKLKPQVRPVC-DSHCVISPADGKILHFGRVKN--CEVEQVK 225

GO:0008654 "phospholipid biosynthetic process" evidence=IEA

GO:0004609 "phosphatidylserine decarboxylase activity" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

UNIPROTKB|H0Y7P7 PISD "Phosphatidylserine decarboxylase alpha chain" [Homo sapiens (taxid:9606)]

 Score = 200 (75.5 bits), Expect = 1.3e-15, P = 1.3e-15
 Identities = 53/143 (37%), Positives = 78/143 (54%)

Query:    67 LLMLGALHAR-RMYDDRKVEEAREKGIEIEFKPDA--KASFLRLLPLRSISRFWGFLTSV 123
             LL+ G  +A  R Y+  +  E  + G+EI  K     + +  + +P R +SR WG L  V
Sbjct:    61 LLVTGGGYAGYRQYEKYRERELEKLGLEIPPKLAGHWEVALYKSVPTRLLSRAWGRLNQV 120

Query:   124 EYPVWMRPYVYKAWARAFHSNLEEAALP-LGEYASLREFFVRTLKQGSRPIDPDPHCLVS 182
             E P W+R  VY  +   F  N++EAA+  L  Y +L EFF R LK  +RP+    H ++S
Sbjct:   121 ELPHWLRRPVYSLYIWTFGVNMKEAAVEDLHHYRNLSEFFRRKLKPQARPVC-GLHSVIS 179

Query:   183 PVDGIVLRVGELKGVGAMIEQVK 205
             P DG +L  G++K     +EQVK
Sbjct:   180 PSDGRILNFGQVKN--CEVEQVK 200

GO:0004609 "phosphatidylserine decarboxylase activity" evidence=IEA

GO:0008654 "phospholipid biosynthetic process" evidence=IEA

UNIPROTKB|G4MPS4 MGG_09213 "Phosphatidylserine decarboxylase proenzyme 1" [Magnaporthe oryzae 70-15 (taxid:242507)]

 Score = 188 (71.2 bits), Expect = 1.5e-15, Sum P(2) = 1.5e-15
 Identities = 44/112 (39%), Positives = 67/112 (59%)

Query:    97 KPDA--KASFLRLLPLRSISRFWGFLTSVEYPVWMRPYVYKAWARAFHSNLEEAA-LPLG 153
             +PD   +   +  LPL+++SR WG    +  P ++R   +K ++  F  NL+E     L 
Sbjct:   128 RPDGPWQVQIMSTLPLKALSRLWGRFNELTLPYYLRIPGFKLYSFIFGVNLDEIEEQDLH 187

Query:   154 EYASLREFFVRTLKQGSRPIDPDPHCLVSPVDGIVLRVGELKGVGAMIEQVK 205
              + +L  FF RTLK G+R +DP+P  L+SP DG VL+ G+++G G  IEQVK
Sbjct:   188 NFPNLASFFYRTLKPGARVLDPNPLALLSPSDGRVLQYGQIEG-GD-IEQVK 237

GO:0005575 "cellular_component" evidence=ND

UNIPROTKB|Q9UG56 PISD "Phosphatidylserine decarboxylase proenzyme" [Homo sapiens (taxid:9606)]

 Score = 200 (75.5 bits), Expect = 1.9e-15, P = 1.9e-15
 Identities = 53/143 (37%), Positives = 78/143 (54%)

Query:    67 LLMLGALHAR-RMYDDRKVEEAREKGIEIEFKPDA--KASFLRLLPLRSISRFWGFLTSV 123
             LL+ G  +A  R Y+  +  E  + G+EI  K     + +  + +P R +SR WG L  V
Sbjct:    70 LLVTGGGYAGYRQYEKYRERELEKLGLEIPPKLAGHWEVALYKSVPTRLLSRAWGRLNQV 129

Query:   124 EYPVWMRPYVYKAWARAFHSNLEEAALP-LGEYASLREFFVRTLKQGSRPIDPDPHCLVS 182
             E P W+R  VY  +   F  N++EAA+  L  Y +L EFF R LK  +RP+    H ++S
Sbjct:   130 ELPHWLRRPVYSLYIWTFGVNMKEAAVEDLHHYRNLSEFFRRKLKPQARPVC-GLHSVIS 188

Query:   183 PVDGIVLRVGELKGVGAMIEQVK 205
             P DG +L  G++K     +EQVK
Sbjct:   189 PSDGRILNFGQVKN--CEVEQVK 209

GO:0004609 "phosphatidylserine decarboxylase activity" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0006646 "phosphatidylethanolamine biosynthetic process" evidence=IEA;TAS

GO:0006644 "phospholipid metabolic process" evidence=TAS

GO:0044281 "small molecule metabolic process" evidence=TAS

GO:0046474 "glycerophospholipid biosynthetic process" evidence=TAS

GO:0005634 "nucleus" evidence=IDA

UNIPROTKB|A8E4Q4 PISD "Phosphatidylserine decarboxylase alpha chain" [Bos taurus (taxid:9913)]

 Score = 193 (73.0 bits), Expect = 2.6e-15, P = 2.6e-15
 Identities = 57/188 (30%), Positives = 89/188 (47%)

Query:    23 HCRQFSTS-FLRKLQTNP-QVRASFXXXXXXXXXXTFLLPGATFATLLMLGALHARRMYD 80
             HC   + S FL+ L+  P +  ++           T  L       +   G     R Y+
Sbjct:    24 HCEDAALSHFLQSLRKPPLRTFSTNARKVHTAPARTSSLLRPLPILVATAGGYAGYRQYE 83

Query:    81 DRKVEEAREKGIEIEFKPDA--KASFLRLLPLRSISRFWGFLTSVEYPVWMRPYVYKAWA 138
               +  E  + G+++  K     + +  + +P R +SR WG L  VE P W+R  VY  + 
Sbjct:    84 KYRERELEKLGLDVPPKLAGHWEVALYKSVPTRLLSRAWGRLNQVELPHWLRRPVYSLYI 143

Query:   139 RAFHSNLEEAALP-LGEYASLREFFVRTLKQGSRPIDPDPHCLVSPVDGIVLRVGELKGV 197
               F  N++EAA+  L  Y +L EFF R LK  +RP+    H ++SP DG +L  G++K  
Sbjct:   144 WTFGVNMKEAAVEDLHHYRNLSEFFRRKLKPQARPVC-GLHSVISPSDGKILNFGQVKN- 201

Query:   198 GAMIEQVK 205
                +EQVK
Sbjct:   202 -CEVEQVK 208

GO:0008654 "phospholipid biosynthetic process" evidence=IEA

GO:0004609 "phosphatidylserine decarboxylase activity" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
4th Layer	4.1.1.65	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	estExt_fgenesh4_pg.C_LG_III0575	phosphatidylserine decarboxylase (EC-4.1.1.65) (444 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
	estExt_Genewise1_v1.C_LG_VIII2313	ethanolaminephosphotransferase (EC-2.7.8.1) (389 aa)						•	•		0.911
	gw1.X.421.1	ethanolaminephosphotransferase (EC-2.7.8.1) (383 aa)						•	•		0.911
	fgenesh4_pm.C_LG_III000383	membrane bound O-acyl transferase (MBOAT) family protein (461 aa)						•	•		0.908
	estExt_fgenesh4_pg.C_LG_I0971	membrane bound O-acyl transferase (MBOAT) family protein (461 aa)					•	•	•		0.908
	gw1.XVIII.245.1	SubName- Full=Putative uncharacterized protein; (138 aa)						•			0.899
	gw1.XVI.1394.1	hypothetical protein (823 aa)						•			0.899
	gw1.IX.3095.1	hypothetical protein (501 aa)						•			0.899
	gw1.I.9205.1	hypothetical protein (822 aa)						•			0.899
	gw1.40.286.1	phospholipase A1 (EC-3.1.1.32) (357 aa)						•			0.899
	gw1.1077.3.1	annotation not avaliable (431 aa)						•			0.899

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	265
PLN02938	428	PLN02938, PLN02938, phosphatidylserine decarboxyla	1e-139
PRK00044	288	PRK00044, psd, phosphatidylserine decarboxylase; R	1e-22
PRK03140	259	PRK03140, PRK03140, phosphatidylserine decarboxyla	6e-21
COG0688	239	COG0688, Psd, Phosphatidylserine decarboxylase [Li	2e-18
PRK03934	265	PRK03934, PRK03934, phosphatidylserine decarboxyla	2e-17
PTZ00403	353	PTZ00403, PTZ00403, phosphatidylserine decarboxyla	9e-17
pfam02666	201	pfam02666, PS_Dcarbxylase, Phosphatidylserine deca	2e-15
TIGR00163	238	TIGR00163, PS_decarb, phosphatidylserine decarboxy	9e-15
PRK00723	297	PRK00723, PRK00723, phosphatidylserine decarboxyla	1e-14
PRK09629	610	PRK09629, PRK09629, bifunctional thiosulfate sulfu	2e-08
PLN02964	644	PLN02964, PLN02964, phosphatidylserine decarboxyla	0.001

>gnl|CDD|178526 PLN02938, PLN02938, phosphatidylserine decarboxylase

 Score =  397 bits (1021), Expect = e-139
 Identities = 179/261 (68%), Positives = 205/261 (78%), Gaps = 18/261 (6%)

Query: 1   MKFRFSNKVSVFPHYLRLEYDHHCRQFSTSFLRKLQTNPQVRASFSGGSNNSQGNTFLLP 60
           MKFR S+K+ +   Y  L + HH +                RAS +GGS +SQGN+FLLP
Sbjct: 1   MKFRVSSKLPLLARYSLLRHQHHHQS--------------SRASVNGGSGSSQGNSFLLP 46

Query: 61  GATFATLLMLGALHARRMYDDRKVEEAREKGIEIEFKPDAKASFLRLLPLRSISRFWGFL 120
           GAT ATLLMLGALHARR+Y+D+KVEEAREKGIE EF PD KASFLRLLPLRSISR WG L
Sbjct: 47  GATVATLLMLGALHARRLYEDKKVEEAREKGIEPEFSPDTKASFLRLLPLRSISRLWGSL 106

Query: 121 TSVEYPVWMRPYVYKAWARAFHSNLEEAALPLGEYASLREFFVRTLKQGSRPIDPDPHCL 180
           TSVE PVWMRPYVYKAWARAFHSNLEEAALPL EYASLREFFVR+LK+G+RPIDPDP+CL
Sbjct: 107 TSVELPVWMRPYVYKAWARAFHSNLEEAALPLEEYASLREFFVRSLKEGARPIDPDPNCL 166

Query: 181 VSPVDGIVLRVGELKGVGAMIEQVKGFSYSVSSLLGSSSFLPMIEEGDMHEQCGEQESSP 240
           VSPVDGIVLR GELKG G MIEQVKGFSYSVS+LLG++S LPM  EG       ++E + 
Sbjct: 167 VSPVDGIVLRFGELKGPGTMIEQVKGFSYSVSALLGANSLLPMTAEGKEE----KEEETL 222

Query: 241 TEKTKKSWWSISLASPRVRDT 261
            +K+ KSW  +SLASP++RD 
Sbjct: 223 KDKSSKSWLRVSLASPKLRDP 243

Length = 428

>gnl|CDD|234591 PRK00044, psd, phosphatidylserine decarboxylase; Reviewed

 Score = 94.1 bits (235), Expect = 1e-22
 Identities = 42/111 (37%), Positives = 63/111 (56%), Gaps = 4/111 (3%)

Query: 107 LLPLRSISRFWGFLTSVEYPVWMRPYVYKAWARAFHSNLEEAALP-LGEYASLREFFVRT 165
           LLP   ++R  G+L S     W+   V + + + +  ++ EA  P    Y +  +FF R 
Sbjct: 12  LLPKHLLTRLAGWLASSRAG-WLTTAVIRLFIKKYKVDMSEAQKPDPAAYKTFNDFFTRA 70

Query: 166 LKQGSRPIDPDPHCLVSPVDGIVLRVGELKGVGAMIEQVKGFSYSVSSLLG 216
           LK G+RPID DP+ LVSP DG + ++G ++     I Q KG SYS+ +LLG
Sbjct: 71  LKDGARPIDEDPNALVSPADGAISQLGPIE--DGQIFQAKGHSYSLEALLG 119

Length = 288

>gnl|CDD|179544 PRK03140, PRK03140, phosphatidylserine decarboxylase; Provisional

 Score = 88.5 bits (220), Expect = 6e-21
 Identities = 33/83 (39%), Positives = 47/83 (56%), Gaps = 2/83 (2%)

Query: 137 WARAFHSNLEEAALPLGEYASLREFFVRTLKQGSRPIDPDPHCLVSPVDGIVLRVGELKG 196
           +A+ +  N +E    L EY +L E F R LK+G RPID D   +VSPVDG+   VG ++ 
Sbjct: 38  YAKVYQINQDEMEKGLKEYRTLHELFTRKLKEGKRPIDTDASSIVSPVDGVFADVGPIED 97

Query: 197 VGAMIEQVKGFSYSVSSLLGSSS 219
                  VKG  YS++ +LG+  
Sbjct: 98  DKTFD--VKGKRYSIAEMLGNEE 118

Length = 259

>gnl|CDD|223760 COG0688, Psd, Phosphatidylserine decarboxylase [Lipid metabolism]

 Score = 81.2 bits (201), Expect = 2e-18
 Identities = 43/120 (35%), Positives = 53/120 (44%), Gaps = 14/120 (11%)

Query: 104 FLRLLPLRSISRFWGFLTSVEYPVWMRPYVYKAWARAFHSNLEEAALPLGEYASLREFFV 163
              LLP  S++R +G L  V  P  +       +  AF  ++ EA  PL  YASL EFF 
Sbjct: 2   LRYLLPELSLTRLFGLLAGVRSPSPIIKREIYPFIAAFLVDMSEAEKPLEPYASLNEFFT 61

Query: 164 RTLKQGSRPIDPDPHCLVSPVDGIVLRVGELKGVGAMIEQVKGFSYSVSSLLGSSSFLPM 223
           R LK   RPIDP+    VSP DG             ++    G  YSV  LLG    L  
Sbjct: 62  RFLKYFFRPIDPE---RVSPADG-----------RIVVSPADGRVYSVEELLGPDDELAY 107

Length = 239

>gnl|CDD|235177 PRK03934, PRK03934, phosphatidylserine decarboxylase; Provisional

 Score = 79.2 bits (196), Expect = 2e-17
 Identities = 34/118 (28%), Positives = 61/118 (51%), Gaps = 5/118 (4%)

Query: 111 RSISRFWGFLTSVEYPVWMRPYVYKAWARAFHSNLEEAALPLGEYASLREFFVRTLKQGS 170
            ++SR +G     ++P +++ ++  ++ + F  ++ E   P   Y SL   F R+LK+  
Sbjct: 5   NALSRIFGKFAGYKFPKFIQKFINASYVKIFKIDMSEFK-PPENYKSLNALFTRSLKK-P 62

Query: 171 RPIDPDPHCLVSPVDGIVLRVGELKGVGAMIEQVKGFSYSVSSLLGSSSFLPMIEEGD 228
           R  D DP+  +SP D ++   G L+   A+  Q+KG  YS+  LLG  S   ++   D
Sbjct: 63  REFDEDPNIFISPCDSLITECGSLEEDKAL--QIKGMEYSIEELLG-ESNSELVNGFD 117

Length = 265

>gnl|CDD|173594 PTZ00403, PTZ00403, phosphatidylserine decarboxylase; Provisional

 Score = 78.4 bits (193), Expect = 9e-17
 Identities = 40/119 (33%), Positives = 63/119 (52%), Gaps = 3/119 (2%)

Query: 100 AKASFLRLLPLRSISRFWGFLTSVEYPVWMRPYVYKAWARAFHSNLEEAALPLGEYASLR 159
           +K  + RLL  R+ SR  G + ++E P   R  +Y    +    N EE   P+  Y S+ 
Sbjct: 52  SKLFWARLLFGRTRSRITGSIFNIEIPNTYRLPIYNFLIKYMGINKEEIKYPIESYKSIG 111

Query: 160 EFFVRTLKQGSRPI-DPDPHCLVSPVDGIVLRVGELKGVGAMIEQVKGFSYSVSSLLGS 217
           +FF R +++ +RPI D   + +VSP D  +   GEL      +E VKG  ++V++ LGS
Sbjct: 112 DFFSRYIREETRPIGDVSDYSIVSPCDSELTDYGELS--SEYLENVKGVKFNVNTFLGS 168

Length = 353

>gnl|CDD|217173 pfam02666, PS_Dcarbxylase, Phosphatidylserine decarboxylase

 Score = 72.3 bits (178), Expect = 2e-15
 Identities = 29/70 (41%), Positives = 39/70 (55%), Gaps = 2/70 (2%)

Query: 158 LREFFVRTLKQGSRPIDPDPHCLVSPVDGIVLRVGELKGVGAMIEQVKGFSYSVSSLLGS 217
           L +FF R L+  +RPI  D   +VSP DG V  +GE+      + QVKG +YS+  LLG 
Sbjct: 1   LNDFFTRFLRDPARPIPTDDDVVVSPADGRVTAIGEIS--EDSVIQVKGVTYSLEELLGD 58

Query: 218 SSFLPMIEEG 227
            S L    +G
Sbjct: 59  PSELAKKFKG 68

This is a family of phosphatidylserine decarboxylases, EC:4.1.1.65. These enzymes catalyze the reaction: Phosphatidyl-L-serine <=> phosphatidylethanolamine + CO2. Phosphatidylserine decarboxylase plays a central role in the biosynthesis of aminophospholipids by converting phosphatidylserine to phosphatidylethanolamine. Length = 201

>gnl|CDD|232850 TIGR00163, PS_decarb, phosphatidylserine decarboxylase precursor

 Score = 71.4 bits (175), Expect = 9e-15
 Identities = 33/70 (47%), Positives = 43/70 (61%), Gaps = 2/70 (2%)

Query: 152 LGEYASLREFFVRTLKQGSRPIDPDPHCLVSPVDGIVLRVGELKGVGAMIEQVKGFSYSV 211
           L +Y SL EFF+R LK   RP+D +P+ LVSP DG++  VG +      I QVKG  YS+
Sbjct: 9   LADYRSLNEFFIRPLKLERRPVDKEPNALVSPADGVISEVGIIN--PNQILQVKGMDYSL 66

Query: 212 SSLLGSSSFL 221
             LLG  + L
Sbjct: 67  EELLGEKNPL 76

Phosphatidylserine decarboxylase is synthesized as a single chain precursor. Generation of the pyruvoyl active site from a Ser is coupled to cleavage of a Gly-Ser bond between the larger (beta) and smaller (alpha chains). It is an integral membrane protein. A closely related family, possibly also active as phosphatidylserine decarboxylase, falls under model TIGR00164 [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 238

>gnl|CDD|179097 PRK00723, PRK00723, phosphatidylserine decarboxylase; Provisional

 Score = 71.9 bits (177), Expect = 1e-14
 Identities = 36/118 (30%), Positives = 58/118 (49%), Gaps = 7/118 (5%)

Query: 103 SFLRLLPLRSI-SRFWGFLTSVEYPVWMRPYVYKAWARAFHSNLEEAALPLGEYASLREF 161
           + L LL  + I S+ +G+          R  +   +   F+ ++ E+  PL ++ S  +F
Sbjct: 34  NLLELLIKKKIFSKIYGWYCDSR---LSRKKIKP-FVNDFNIDMSESEKPLSDFKSFNDF 89

Query: 162 FVRTLKQGSRPIDPDPHCLVSPVDGIVLRVGELKGVGAMIEQVKGFSYSVSSLLGSSS 219
           F R LK  +RPID   + L+SP DG +L    +      + QVKG +YS+  LLG   
Sbjct: 90  FTRKLKPEARPIDQGENILISPGDGRLLAYENIDLNS--LFQVKGKTYSLKELLGDPE 145

Length = 297

>gnl|CDD|104071 PRK09629, PRK09629, bifunctional thiosulfate sulfurtransferase/phosphatidylserine decarboxylase; Provisional

 Score = 54.4 bits (130), Expect = 2e-08
 Identities = 38/112 (33%), Positives = 56/112 (50%), Gaps = 6/112 (5%)

Query: 107 LLPLRSISRFWGFLTSVEYPVWMRPYVYKAW-ARAFHSNLEEAALP-LGEYASLREFFVR 164
           LLP   +SR  G +       W +   + AW AR +  ++ +A +  L  Y     FF R
Sbjct: 335 LLPHHLLSRLAGCVAECRVR-WFKN-AFTAWFARRYQVDMSQALVEDLTSYEHFNAFFTR 392

Query: 165 TLKQGSRPIDPDPHCLVSPVDGIVLRVGELKGVGAMIEQVKGFSYSVSSLLG 216
            LK  +RP+D  P  ++SP DG + ++G +      I Q KG S+SV  LLG
Sbjct: 393 ALKADARPLDTTPGAILSPADGAISQLGPID--HGRIFQAKGHSFSVLELLG 442

Length = 610

>gnl|CDD|215520 PLN02964, PLN02964, phosphatidylserine decarboxylase

 Score = 39.5 bits (92), Expect = 0.001
 Identities = 25/87 (28%), Positives = 40/87 (45%), Gaps = 2/87 (2%)

Query: 144 NLEEAALPLGEYASLREFFVRTLKQGSRPIDPDPHCLVSPVDGIVLRVGELKGVGAMIE- 202
           N++E   PL  + +  EFF+R LK G+RPI    +  V+ V     R+   + V      
Sbjct: 402 NMDEVKYPLEHFKTFNEFFIRELKPGARPIACMDNDDVA-VCAADCRLMAFQSVDDSTRF 460

Query: 203 QVKGFSYSVSSLLGSSSFLPMIEEGDM 229
            +KG  +S+  LLG         +G +
Sbjct: 461 WIKGRKFSIKGLLGKKVHSDAFLDGSL 487

Length = 644

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	265
PLN02938	428	phosphatidylserine decarboxylase	100.0
KOG2420	382	consensus Phosphatidylserine decarboxylase [Lipid	100.0
PTZ00403	353	phosphatidylserine decarboxylase; Provisional	100.0
PRK00044	288	psd phosphatidylserine decarboxylase; Reviewed	100.0
PRK00723	297	phosphatidylserine decarboxylase; Provisional	100.0
PRK03140	259	phosphatidylserine decarboxylase; Provisional	100.0
PRK03934	265	phosphatidylserine decarboxylase; Provisional	100.0
PRK09629	610	bifunctional thiosulfate sulfurtransferase/phospha	100.0
PLN02964	644	phosphatidylserine decarboxylase	99.98
TIGR00163	238	PS_decarb phosphatidylserine decarboxylase precurs	99.94
KOG2419	975	consensus Phosphatidylserine decarboxylase [Lipid	99.9
COG0688	239	Psd Phosphatidylserine decarboxylase [Lipid metabo	99.86
PF02666	202	PS_Dcarbxylase: Phosphatidylserine decarboxylase;	99.84
TIGR00164	189	PS_decarb_rel phosphatidylserine decarboxylase pre	98.57
PRK05305	206	phosphatidylserine decarboxylase; Provisional	98.32

>PLN02938 phosphatidylserine decarboxylase

Probab=100.00  E-value=1.7e-61  Score=466.69  Aligned_cols=245  Identities=73%  Similarity=1.180  Sum_probs=223.3

Q ss_pred             CcccCCCCccccccccccccccccccchhhhhhhcccCcCccccccCCCCCCccceeeechhHHHHHHHHHHHHHHHhhh
Q 024609            1 MKFRFSNKVSVFPHYLRLEYDHHCRQFSTSFLRKLQTNPQVRASFSGGSNNSQGNTFLLPGATFATLLMLGALHARRMYD   80 (265)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~i~~lg~~~~~~~~~   80 (265)
                      ||||+++++|+|+++.+++|+|+ ++             +.+++++|++++++++.||+||||++||+|||++|+||+|+
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~-~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~   66 (428)
T PLN02938          1 MKFRVSSKLPLLARYSLLRHQHH-HQ-------------SSRASVNGGSGSSQGNSFLLPGATVATLLMLGALHARRLYE   66 (428)
T ss_pred             CCCCCCCCcccccccCcchhhcc-hh-------------cccccccCCCCCCCCceeecCChhHHHHHHHHHHHHHHHHH
Confidence            99999999999999998888776 43             13357889999999999999999999999999999999999


Q ss_pred             hHHHHHhhhhccceeecChHHHHHHHhhchHHHHHHHHHhhcCCCCCcchhhhHHHHHHHhCCCcccccCCccccCchhh
Q 024609           81 DRKVEEAREKGIEIEFKPDAKASFLRLLPLRSISRFWGFLTSVEYPVWMRPYVYKAWARAFHSNLEEAALPLGEYASLRE  160 (265)
Q Consensus        81 ~~~~~~~~~~~i~~~~~~~~~~~ll~lLP~r~iSrl~G~~~~~~lp~~~r~~iik~fik~f~IdL~E~~~pl~~Y~Sfnd  160 (265)
                      ++++++++++|++++|+++|++.++++||++++||+||+++++++|.|+|+++|++|++.|+|||+|++.|+++|+||||
T Consensus        67 ~~~~~~~~~~g~~~~~~~~~~~~ll~lLP~r~iSrl~G~~a~~~~P~~lr~~i~~~fa~~f~inl~E~~~p~~~Y~Sfnd  146 (428)
T PLN02938         67 DKKVEEAREKGIEPEFSPDTKASFLRLLPLRSISRLWGSLTSVELPVWMRPYVYKAWARAFHSNLEEAALPLEEYASLRE  146 (428)
T ss_pred             HHHHHHHHhcCcccccCCHHHHHHHHHccHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHhCcCHHHhhcchhhCCCHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999989999999999


Q ss_pred             hhhhcCCCCCCcCCCCCCeeEecCCceEEEeeeecCCCceeEeecCCccchhhhcCCCCCCCCCCCCceeeeccccCccc
Q 024609          161 FFVRTLKQGSRPIDPDPHCLVSPVDGIVLRVGELKGVGAMIEQVKGFSYSVSSLLGSSSFLPMIEEGDMHEQCGEQESSP  240 (265)
Q Consensus       161 FFtRkLKpgaRPId~d~~~lVSPaDGkV~~~G~I~~~~~~ieqVKG~tYSL~~LLG~~~~~~~f~~G~~h~~~~~~~g~~  240 (265)
                      ||+|+||||+||||+++++|||||||+|+++|.|+++++.++||||++|||++|||+++.++.+.++.++.+    ++..
T Consensus       147 FFtRkLKpgaRPid~d~~~iVSPaDG~v~~~g~I~~~~~~~~qVKG~~YSL~~LLG~~~~~~~~~~~~~~~~----~~~~  222 (428)
T PLN02938        147 FFVRSLKEGARPIDPDPNCLVSPVDGIVLRFGELKGPGTMIEQVKGFSYSVSALLGANSLLPMTAEGKEEKE----EETL  222 (428)
T ss_pred             hheeccCCCCCcCCCCCCeEEeccCCceEEeeeecCCCceEEEecCCcccHHHHcCCCcccccccccccchh----hccc
Confidence            999999999999999999999999999999999986444667999999999999998887776665544443    2478


Q ss_pred             ccCCCceEEEEecCCCcccccCC
Q 024609          241 TEKTKKSWWSISLASPRVRDTAI  263 (265)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~  263 (265)
                      .+++.++|||++.|.+|+||+..
T Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~  245 (428)
T PLN02938        223 KDKSSKSWLRVSLASPKLRDPVS  245 (428)
T ss_pred             cccccchhhhhhhcccccccccc
Confidence            88888999999999999998654

>KOG2420 consensus Phosphatidylserine decarboxylase [Lipid transport and metabolism]

Probab=100.00  E-value=1.2e-41  Score=318.87  Aligned_cols=119  Identities=50%  Similarity=0.826  Sum_probs=113.3

Q ss_pred             eecChHHHHHHHhhchHHHHHHHHHhhcCCCCCcchhhhHHHHHHHhCCCcccccCC-ccccCchhhhhhhcCCCCCCcC
Q 024609           95 EFKPDAKASFLRLLPLRSISRFWGFLTSVEYPVWMRPYVYKAWARAFHSNLEEAALP-LGEYASLREFFVRTLKQGSRPI  173 (265)
Q Consensus        95 ~~~~~~~~~ll~lLP~r~iSrl~G~~~~~~lp~~~r~~iik~fik~f~IdL~E~~~p-l~~Y~SfndFFtRkLKpgaRPI  173 (265)
                      ...+.|+..++..||+|++||+||++++.++|.|+|++.|++|++.|||||+|++.| +++|+||+|||+|+||||+|||
T Consensus        72 r~~~~wq~~~y~sLPlrtlSR~WG~~n~~elP~wlR~~~y~lys~~Fg~NL~Ea~~pDl~hY~nlaeFF~RkLKpg~RpI  151 (382)
T KOG2420|consen   72 RTYSIWQFRVYSSLPLRTLSRVWGQLNSLELPVWLRPPGYGLYARTFGCNLDEAADPDLTHYRNLAEFFTRKLKPGTRPI  151 (382)
T ss_pred             eeccceEEEEEEecchHHHHHHHHhhhheeccchhcchhhhhhhHhhccCchhccCchhhhhhhHHHHHhhccCCCCccc
Confidence            455669999999999999999999999999999999999999999999999999998 9999999999999999999999


Q ss_pred             CCCCCeeEecCCceEEEeeeecCCCceeEeecCCccchhhhcC
Q 024609          174 DPDPHCLVSPVDGIVLRVGELKGVGAMIEQVKGFSYSVSSLLG  216 (265)
Q Consensus       174 d~d~~~lVSPaDGkV~~~G~I~~~~~~ieqVKG~tYSL~~LLG  216 (265)
                      |++ ..+||||||||++||.|++  ++||||||++|||++|||
T Consensus       152 dp~-~piVSPaDGkIL~fG~v~~--~~IEqVKG~tYSleafLG  191 (382)
T KOG2420|consen  152 DPA-SPLVSPADGKILHFGVVED--NEIEQVKGHTYSLEAFLG  191 (382)
T ss_pred             CCC-CceecCCCCcEEEEEEecC--ceeeEecCeeeeHHHHcC
Confidence            975 4799999999999999997  489999999999999999

>PTZ00403 phosphatidylserine decarboxylase; Provisional

Probab=100.00  E-value=2.3e-40  Score=314.01  Aligned_cols=145  Identities=28%  Similarity=0.411  Sum_probs=131.4

Q ss_pred             eecChHHHHHHHhhchHHHHHHHHHhhcCCCCCcchhhhHHHHHHHhCCCcccccCCccccCchhhhhhhcCCCCCCcCC
Q 024609           95 EFKPDAKASFLRLLPLRSISRFWGFLTSVEYPVWMRPYVYKAWARAFHSNLEEAALPLGEYASLREFFVRTLKQGSRPID  174 (265)
Q Consensus        95 ~~~~~~~~~ll~lLP~r~iSrl~G~~~~~~lp~~~r~~iik~fik~f~IdL~E~~~pl~~Y~SfndFFtRkLKpgaRPId  174 (265)
                      ..++++++.++++||.+.+||++|+++++++|.|++.++|++|++.|+|||+|+++|+++|+||||||+|+||||+|||+
T Consensus        47 ~~~~~~~~~~l~llp~~~~Srl~G~~a~~~~p~~lr~~ii~~fik~y~Inl~E~~~~~~~Y~SfndFFtR~lk~~~RPi~  126 (353)
T PTZ00403         47 NAQQSSKLFWARLLFGRTRSRITGSIFNIEIPNTYRLPIYNFLIKYMGINKEEIKYPIESYKSIGDFFSRYIREETRPIG  126 (353)
T ss_pred             eeccHHHHHHHHHhhhHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHCCCHHHhhCChhcCCCHHHceeecccCCCCCCC
Confidence            45678999999999999999999999999999889999999999999999999998899999999999999999999995


Q ss_pred             -CCCCeeEecCCceEEEeeeecCCCceeEeecCCccchhhhcCCCCCCCCCCCC--------------ceeeeccccCcc
Q 024609          175 -PDPHCLVSPVDGIVLRVGELKGVGAMIEQVKGFSYSVSSLLGSSSFLPMIEEG--------------DMHEQCGEQESS  239 (265)
Q Consensus       175 -~d~~~lVSPaDGkV~~~G~I~~~~~~ieqVKG~tYSL~~LLG~~~~~~~f~~G--------------~~h~~~~~~~g~  239 (265)
                       +++++|||||||+|+++|.|+++ .. +||||++|||++|||++ .++.|.+|              ||||.|+|++|+
T Consensus       127 ~~~~~~iVSPaDg~v~~~g~I~~~-~~-~qvKG~~Ysl~~LLg~~-~a~~~~~g~~~~~~~v~yLsP~DYHR~HsP~~g~  203 (353)
T PTZ00403        127 DVSDYSIVSPCDSELTDYGELSSE-YL-ENVKGVKFNVNTFLGSD-MQKKYNDGSTKFFYAIFYLSPKKYHHFHAPFNFK  203 (353)
T ss_pred             CCCCCeEEeCCCceeEeeeEecCC-CE-EEeCCCcccHHHHhCch-hHHhhcCCCCcEEEEEEEECcceeeEEeccCceE
Confidence             57889999999999999999874 34 49999999999999964 45555544              799999999999


Q ss_pred             ccc
Q 024609          240 PTE  242 (265)
Q Consensus       240 ~~~  242 (265)
                      +.+
T Consensus       204 v~~  206 (353)
T PTZ00403        204 YKI  206 (353)
T ss_pred             EEE
Confidence            865

>PRK00044 psd phosphatidylserine decarboxylase; Reviewed

Probab=100.00  E-value=1.1e-37  Score=288.26  Aligned_cols=142  Identities=33%  Similarity=0.596  Sum_probs=130.7

Q ss_pred             ChHHHHHHHhhchHHHHHHHHHhhcCCCCCcchhhhHHHHHHHhCCCcccccCC-ccccCchhhhhhhcCCCCCCcCCCC
Q 024609           98 PDAKASFLRLLPLRSISRFWGFLTSVEYPVWMRPYVYKAWARAFHSNLEEAALP-LGEYASLREFFVRTLKQGSRPIDPD  176 (265)
Q Consensus        98 ~~~~~~ll~lLP~r~iSrl~G~~~~~~lp~~~r~~iik~fik~f~IdL~E~~~p-l~~Y~SfndFFtRkLKpgaRPId~d  176 (265)
                      ..+...+++++|++++||++|+++++++| |+++.+|+.|++.|+|||+|+++| +++|+||||||+|+|||++|||+++
T Consensus         3 ~~~~~~~~~~~p~~~~Sr~~g~~~~~~~~-~~~~~~i~~f~~~~~i~~~E~~~~~~~~y~s~~~FF~R~lk~~~Rpi~~~   81 (288)
T PRK00044          3 DRLKILLQYLLPKHLLTRLAGWLASSRAG-WLTTAVIRLFIKKYKVDMSEAQKPDPAAYKTFNDFFTRALKDGARPIDED   81 (288)
T ss_pred             hHHHHHHHHHcChHHHHHHHHHHHcCCCc-cchHHHHHHHHHHhCCCHHHHccCChhhCCCHHHhceecccCCCCCCCCC
Confidence            45778899999999999999999999998 788888999999999999999876 8999999999999999999999999


Q ss_pred             CCeeEecCCceEEEeeeecCCCceeEeecCCccchhhhcC-CCCCCCCCCCC----------ceeeeccccCccccc
Q 024609          177 PHCLVSPVDGIVLRVGELKGVGAMIEQVKGFSYSVSSLLG-SSSFLPMIEEG----------DMHEQCGEQESSPTE  242 (265)
Q Consensus       177 ~~~lVSPaDGkV~~~G~I~~~~~~ieqVKG~tYSL~~LLG-~~~~~~~f~~G----------~~h~~~~~~~g~~~~  242 (265)
                      +++|||||||+|+.+|+|+++ . ++||||++|||++||| ++++++.|.+|          |||++|+|++|++.+
T Consensus        82 ~~~ivSPaDG~v~~~~~i~~~-~-~~~vKG~~Ysl~~lL~~~~~~~~~~~~G~~i~iyLsp~DYHr~HsPv~G~v~~  156 (288)
T PRK00044         82 PNALVSPADGAISQLGPIEDG-Q-IFQAKGHSYSLEALLGGDAALADPFRNGSFATIYLSPRDYHRVHMPCDGTLRE  156 (288)
T ss_pred             CCEEEeCCCceEEeEEeecCC-C-EEEECCceeeHHHHcCCChHHHHhcCCCEEEEEEECcceeeEEeccCCcEEEE
Confidence            999999999999999999874 3 4599999999999998 55678888887          799999999999976

>PRK00723 phosphatidylserine decarboxylase; Provisional

Probab=100.00  E-value=1.7e-37  Score=288.55  Aligned_cols=150  Identities=29%  Similarity=0.473  Sum_probs=136.8

Q ss_pred             hhhhccceeecChHHHHHHHhh-chHHHHHHHHHhhcCCCCCcchhhhHHHHHHHhCCCcccccCCccccCchhhhhhhc
Q 024609           87 AREKGIEIEFKPDAKASFLRLL-PLRSISRFWGFLTSVEYPVWMRPYVYKAWARAFHSNLEEAALPLGEYASLREFFVRT  165 (265)
Q Consensus        87 ~~~~~i~~~~~~~~~~~ll~lL-P~r~iSrl~G~~~~~~lp~~~r~~iik~fik~f~IdL~E~~~pl~~Y~SfndFFtRk  165 (265)
                      .++..+++.|++.+++.++.+| |.+++|+++|++++++++   +. .|+.|++.|+|||+|+++|+++|+||||||+|+
T Consensus        18 ~~~~~~~~~y~~~~gr~~l~~l~~~~~~S~~~G~~~~~~~s---~~-~I~~f~~~~~id~~e~~~~~~~y~sfn~FFtR~   93 (297)
T PRK00723         18 AGEKYLKWLYSSPIGKNLLELLIKKKIFSKIYGWYCDSRLS---RK-KIKPFVNDFNIDMSESEKPLSDFKSFNDFFTRK   93 (297)
T ss_pred             cHHHHHHHHhcCHHHHHHHHHhcCcHHHHHHHHHHhCCcch---HH-HHHHHHHHhCCCHHHhhcChhhCCCHHHceeec
Confidence            3466788999999999888766 669999999999999965   65 469999999999999998899999999999999


Q ss_pred             CCCCCCcCCCCCCeeEecCCceEEEeeeecCCCceeEeecCCccchhhhcCCCCCCCCCCCC----------ceeeeccc
Q 024609          166 LKQGSRPIDPDPHCLVSPVDGIVLRVGELKGVGAMIEQVKGFSYSVSSLLGSSSFLPMIEEG----------DMHEQCGE  235 (265)
Q Consensus       166 LKpgaRPId~d~~~lVSPaDGkV~~~G~I~~~~~~ieqVKG~tYSL~~LLG~~~~~~~f~~G----------~~h~~~~~  235 (265)
                      |||++|||++++++|||||||+|++++.|+++ ..+ ||||++|||++|||++++++.|.+|          ||||+|+|
T Consensus        94 lk~~~Rpi~~~~~~ivSPaDg~v~~~~~i~~~-~~~-~vKG~~Ysl~~LLg~~~~a~~f~~G~~~~~yLsp~DYHR~HsP  171 (297)
T PRK00723         94 LKPEARPIDQGENILISPGDGRLLAYENIDLN-SLF-QVKGKTYSLKELLGDPELAKKYAGGTCLILRLCPTDYHRFHFP  171 (297)
T ss_pred             CCCCCCCCCCCCCEEEECCCcEEEEEEEEcCC-CeE-EEcCceeeHHHHcCChhHHHhcCCCEEEEEEECCCeEEEEEcc
Confidence            99999999988899999999999999999874 455 9999999999999999999999987          79999999


Q ss_pred             cCccccc
Q 024609          236 QESSPTE  242 (265)
Q Consensus       236 ~~g~~~~  242 (265)
                      ++|++.+
T Consensus       172 v~G~v~~  178 (297)
T PRK00723        172 DSGICEE  178 (297)
T ss_pred             CCcEEEE
Confidence            9999976

>PRK03140 phosphatidylserine decarboxylase; Provisional

Probab=100.00  E-value=7.2e-37  Score=279.18  Aligned_cols=138  Identities=29%  Similarity=0.443  Sum_probs=128.3

Q ss_pred             hHHHHHHHhhchHHHHHHHHHhhcCCCCCcchhhhHHHHHHHhCCCcccccCCccccCchhhhhhhcCCCCCCcCCCCCC
Q 024609           99 DAKASFLRLLPLRSISRFWGFLTSVEYPVWMRPYVYKAWARAFHSNLEEAALPLGEYASLREFFVRTLKQGSRPIDPDPH  178 (265)
Q Consensus        99 ~~~~~ll~lLP~r~iSrl~G~~~~~~lp~~~r~~iik~fik~f~IdL~E~~~pl~~Y~SfndFFtRkLKpgaRPId~d~~  178 (265)
                      .+...+++++|.+++|+++|++++++++   +. +|+.|++.|+|||+|+++|+++|+||||||+|+|||++|||+++++
T Consensus         4 ~~~~~~~~~~~~~~~s~~~g~~~~~~~s---~~-~i~~f~~~~~i~~~e~~~~~~~y~sfn~FF~R~lk~~~Rpi~~~~~   79 (259)
T PRK03140          4 TLYRLLIELTNGRFTSYLLRKFAQSRLS---SI-LIPSYAKVYQINQDEMEKGLKEYRTLHELFTRKLKEGKRPIDTDAS   79 (259)
T ss_pred             HHHHHHHHHcchHHHHHHHHHHhCCccc---HH-HHHHHHHHhCCChHHhccChhcCCCHHHhceecCCCCCCCCCCCCC
Confidence            4677899999999999999999999964   55 6799999999999999999999999999999999999999998889


Q ss_pred             eeEecCCceEEEeeeecCCCceeEeecCCccchhhhcCCCCCCCCCCCC----------ceeeeccccCccccc
Q 024609          179 CLVSPVDGIVLRVGELKGVGAMIEQVKGFSYSVSSLLGSSSFLPMIEEG----------DMHEQCGEQESSPTE  242 (265)
Q Consensus       179 ~lVSPaDGkV~~~G~I~~~~~~ieqVKG~tYSL~~LLG~~~~~~~f~~G----------~~h~~~~~~~g~~~~  242 (265)
                      +|||||||+|+++|.|+++ ..+ ||||++|||++|||++++++.|.+|          |||++|+|++|++.+
T Consensus        80 ~vvSPaDg~v~~~~~i~~~-~~~-~iKg~~ysl~~lL~~~~~a~~f~~G~~~~i~Lsp~DYHr~h~Pv~G~v~~  151 (259)
T PRK03140         80 SIVSPVDGVFADVGPIEDD-KTF-DVKGKRYSIAEMLGNEERAQRYAGGTYMVLYLSPSHYHRIHSPISGTVTE  151 (259)
T ss_pred             EEEeCCCcEEEEEeecCCC-CEE-EECCceeeHHHhcCChhHHhhhcCCeEEEEEECccceEEEeccCCcEEEE
Confidence            9999999999999999874 455 9999999999999999999999988          799999999999977

>PRK03934 phosphatidylserine decarboxylase; Provisional

Probab=100.00  E-value=3e-35  Score=269.29  Aligned_cols=129  Identities=27%  Similarity=0.534  Sum_probs=118.7

Q ss_pred             chHHHHHHHHHhhcCCCCCcchhhhHHHHHHHhCCCcccccCCccccCchhhhhhhcCCCCCCcCCCCCCeeEecCCceE
Q 024609          109 PLRSISRFWGFLTSVEYPVWMRPYVYKAWARAFHSNLEEAALPLGEYASLREFFVRTLKQGSRPIDPDPHCLVSPVDGIV  188 (265)
Q Consensus       109 P~r~iSrl~G~~~~~~lp~~~r~~iik~fik~f~IdL~E~~~pl~~Y~SfndFFtRkLKpgaRPId~d~~~lVSPaDGkV  188 (265)
                      |.+++|+++|+++++++|.|++.++|++|++.|+|||+|++ ++++|+||||||+|+|||+ |||+++++.|||||||+|
T Consensus         3 ~~~~~S~~~g~~~~~~~~~~~~~~~i~~f~~~~~i~~~e~~-~~~~y~sfn~FF~R~lk~~-Rpi~~~~~~ivSPaDG~v   80 (265)
T PRK03934          3 LSNALSRIFGKFAGYKFPKFIQKFINASYVKIFKIDMSEFK-PPENYKSLNALFTRSLKKP-REFDEDPNIFISPCDSLI   80 (265)
T ss_pred             chHHHHHHHHHHhcCCCCccchHHHHHHHHHHHCCCHHHhc-CcccCCCHHHhccccCCCC-CCCCCCCCEEEECCCcEE
Confidence            66899999999999999989999999999999999999997 5899999999999999995 999999999999999999


Q ss_pred             EEeeeecCCCceeEeecCCccchhhhcCCCCCCCCCCCC----------ceeeeccccCccccc
Q 024609          189 LRVGELKGVGAMIEQVKGFSYSVSSLLGSSSFLPMIEEG----------DMHEQCGEQESSPTE  242 (265)
Q Consensus       189 ~~~G~I~~~~~~ieqVKG~tYSL~~LLG~~~~~~~f~~G----------~~h~~~~~~~g~~~~  242 (265)
                      +++|.|+++ .. +||||++|||++|||++.. +.|.+|          |||++|+|++|++.+
T Consensus        81 ~~~~~i~~~-~~-~~vKg~~y~l~~lL~~~~~-~~~~~g~~~~iyLsp~dYHr~hsP~~G~v~~  141 (265)
T PRK03934         81 TECGSLEED-KA-LQIKGMEYSIEELLGESNS-ELVNGFDYINFYLSPKDYHRYHAPCDLEILE  141 (265)
T ss_pred             EEEEEECCC-CE-EEECCccccHHHHcCCcch-hhcCCcEEEEEEECcceEEEEeccCCcEEEE
Confidence            999999874 34 4999999999999998744 788877          799999999999977

>PRK09629 bifunctional thiosulfate sulfurtransferase/phosphatidylserine decarboxylase; Provisional

Probab=100.00  E-value=1.8e-35  Score=297.16  Aligned_cols=142  Identities=28%  Similarity=0.445  Sum_probs=130.4

Q ss_pred             ChHHHHHHHhhchHHHHHHHHHhhcCCCCCcchhhhHHHHHHHhCCCccccc-CCccccCchhhhhhhcCCCCCCcCCCC
Q 024609           98 PDAKASFLRLLPLRSISRFWGFLTSVEYPVWMRPYVYKAWARAFHSNLEEAA-LPLGEYASLREFFVRTLKQGSRPIDPD  176 (265)
Q Consensus        98 ~~~~~~ll~lLP~r~iSrl~G~~~~~~lp~~~r~~iik~fik~f~IdL~E~~-~pl~~Y~SfndFFtRkLKpgaRPId~d  176 (265)
                      ..+...++.+||++++||++|+++++++| |++..+|++|++.|+|||+|++ +++++|+||||||+|+||||+|||+.+
T Consensus       326 ~~~~~~~~~llp~~~~S~~~g~~a~~~~~-~~~~~~i~~fi~~y~i~l~E~~~~~~~~y~sfn~FF~R~lk~~~Rpi~~~  404 (610)
T PRK09629        326 DRLFIISQYLLPHHLLSRLAGCVAECRVR-WFKNAFTAWFARRYQVDMSQALVEDLTSYEHFNAFFTRALKADARPLDTT  404 (610)
T ss_pred             HHHHHHHHHHcChHHHHHHHHHHHhCccH-hhHHHHHHHHHHHhCCCHHHhhccCcccCCCHHHhcccccCCCCCCCCCC
Confidence            34778889999999999999999999997 7899999999999999999998 459999999999999999999999999


Q ss_pred             CCeeEecCCceEEEeeeecCCCceeEeecCCccchhhhcC-CCCCCCCCCCC----------ceeeeccccCccccc
Q 024609          177 PHCLVSPVDGIVLRVGELKGVGAMIEQVKGFSYSVSSLLG-SSSFLPMIEEG----------DMHEQCGEQESSPTE  242 (265)
Q Consensus       177 ~~~lVSPaDGkV~~~G~I~~~~~~ieqVKG~tYSL~~LLG-~~~~~~~f~~G----------~~h~~~~~~~g~~~~  242 (265)
                      ++.|||||||+|+++|.|+++  .++||||++|||++||| +.+.++.|.+|          ||||+|+|++|++.+
T Consensus       405 ~~~ivSPaDg~v~~~g~i~~~--~~~~vKG~~Ysl~eLL~~~~~~~~~~~~G~~~~iyLsP~DYHR~H~Pv~G~v~~  479 (610)
T PRK09629        405 PGAILSPADGAISQLGPIDHG--RIFQAKGHSFSVLELLGGDPKLSAPFMGGEFATVYLSPKDYHRVHMPLAGTLRE  479 (610)
T ss_pred             CCeEEecCccceeeeccccCC--cEEEECCCcccHHHHhCCCHHHHhhcCCCeEEEEEECCCeeEEEeecCCcEEEE
Confidence            999999999999999999874  44599999999999999 55677888887          799999999999977

>PLN02964 phosphatidylserine decarboxylase

Probab=99.98  E-value=3.3e-33  Score=281.68  Aligned_cols=146  Identities=19%  Similarity=0.297  Sum_probs=133.7

Q ss_pred             ccceeecChHHHHHHHhhch---HHHHHHHHHhhcCCCCCcchhhhHHHHHHHh--CCCcccccCCccccCchhhhhhhc
Q 024609           91 GIEIEFKPDAKASFLRLLPL---RSISRFWGFLTSVEYPVWMRPYVYKAWARAF--HSNLEEAALPLGEYASLREFFVRT  165 (265)
Q Consensus        91 ~i~~~~~~~~~~~ll~lLP~---r~iSrl~G~~~~~~lp~~~r~~iik~fik~f--~IdL~E~~~pl~~Y~SfndFFtRk  165 (265)
                      ++++.|++.+++.+++++..   +.+|+++|++++++.+   +. .|+.|++.|  +|||+|+++|+++|+||||||+|+
T Consensus       348 ~~~~lY~~~~G~~~l~~~~~~~l~~~S~~~G~~~dsp~S---~~-~I~~Fi~~~~~~id~~E~~~p~~~y~SfNdFFtRk  423 (644)
T PLN02964        348 SMRAIYQSKIGLRLMDQGAKEILQRLSEKQGKKMNSVES---AQ-DIPKFLEFFKDQINMDEVKYPLEHFKTFNEFFIRE  423 (644)
T ss_pred             hHHHHhcCchhHHHHHHHHHHHHHHHHHHHHhHcCChhh---HH-HHHHHHHHhhcCcCHHHhhcCcccCCCHHHcceec
Confidence            56789999999999999988   7789999999999976   66 469999988  899999999999999999999999


Q ss_pred             CCCCCCcCCC--CCCeeEecCCceEEEeeeecCCCceeEeecCCccchhhhcCCCCCCCCCCCC----------ceeeec
Q 024609          166 LKQGSRPIDP--DPHCLVSPVDGIVLRVGELKGVGAMIEQVKGFSYSVSSLLGSSSFLPMIEEG----------DMHEQC  233 (265)
Q Consensus       166 LKpgaRPId~--d~~~lVSPaDGkV~~~G~I~~~~~~ieqVKG~tYSL~~LLG~~~~~~~f~~G----------~~h~~~  233 (265)
                      ||||+|||+.  ++++|||||||+|+++|.|+++ ..+ ||||++|||++|||++++++.|.+|          ||||+|
T Consensus       424 LKp~aRPi~~~~~~~~iVSPaDg~v~~~~~i~~~-~~~-~IKG~~Ysl~~LLg~~~~a~~f~gG~~~i~rLsP~DYHR~H  501 (644)
T PLN02964        424 LKPGARPIACMDNDDVAVCAADCRLMAFQSVDDS-TRF-WIKGRKFSIKGLLGKKVHSDAFLDGSLVIFRLAPQDYHRFH  501 (644)
T ss_pred             CCCCCCCCCCCCCCCEEEECCCceeEEeeeecCC-cEE-EECCCcccHHHHcCCchhHHhcCCCEEEEEEECCceeceee
Confidence            9999999984  6779999999999999998864 455 9999999999999999999999998          799999


Q ss_pred             cccCccccc
Q 024609          234 GEQESSPTE  242 (265)
Q Consensus       234 ~~~~g~~~~  242 (265)
                      +|++|++.+
T Consensus       502 sPv~G~v~~  510 (644)
T PLN02964        502 VPVSGVIEK  510 (644)
T ss_pred             cCCCCEEEE
Confidence            999999976

>TIGR00163 PS_decarb phosphatidylserine decarboxylase precursor

Probab=99.94  E-value=2.2e-27  Score=214.28  Aligned_cols=96  Identities=41%  Similarity=0.722  Sum_probs=87.0

Q ss_pred             cccccCC-ccccCchhhhhhhcCCCCCCcCCCCCCeeEecCCceEEEeeeecCCCceeEeecCCccchhhhcCCC-CCCC
Q 024609          145 LEEAALP-LGEYASLREFFVRTLKQGSRPIDPDPHCLVSPVDGIVLRVGELKGVGAMIEQVKGFSYSVSSLLGSS-SFLP  222 (265)
Q Consensus       145 L~E~~~p-l~~Y~SfndFFtRkLKpgaRPId~d~~~lVSPaDGkV~~~G~I~~~~~~ieqVKG~tYSL~~LLG~~-~~~~  222 (265)
                      |+|++++ +++|+||||||+|+|||++|||+++++.|||||||+|+++|+|+++ .. +||||++|||.+|||++ ++++
T Consensus         1 ~~e~~~~~~~~y~s~n~FF~R~lk~~~Rpi~~~~~~ivSPaDG~v~~~~~i~~~-~~-~~vKG~~ysl~~lL~~~~~~~~   78 (238)
T TIGR00163         1 LDEAEKPDLADYRSLNEFFIRPLKLERRPVDKEPNALVSPADGVISEVGIINPN-QI-LQVKGMDYSLEELLGEKNPLSP   78 (238)
T ss_pred             CchhccCCcccCCCHHHheeecCCCCCCCCCCCCCEEEECCCceeEEEEEecCC-cE-EEEcCCcccHHHHcCCChhHHH
Confidence            6899864 9999999999999999999999999999999999999999999874 34 49999999999999976 6777


Q ss_pred             CCCCC-----------ceeeeccccCccccc
Q 024609          223 MIEEG-----------DMHEQCGEQESSPTE  242 (265)
Q Consensus       223 ~f~~G-----------~~h~~~~~~~g~~~~  242 (265)
                      .|.+|           |||++|+|++|++.+
T Consensus        79 ~f~~G~~~i~iyLsp~DYHr~hsPv~G~v~~  109 (238)
T TIGR00163        79 YFRNGGFFVVTYLSPRDYHRFHSPCDCRLRK  109 (238)
T ss_pred             hccCCeEEEEEEECccceeEEeccCCcEEEE
Confidence            88776           699999999999976

Phosphatidylserine decarboxylase is synthesized as a single chain precursor. Generation of the pyruvoyl active site from a Ser is coupled to cleavage of a Gly-Ser bond between the larger (beta) and smaller (alpha chains). It is an integral membrane protein. A closely related family, possibly also active as phosphatidylserine decarboxylase, falls under model TIGR00164.

>KOG2419 consensus Phosphatidylserine decarboxylase [Lipid transport and metabolism]

Probab=99.90  E-value=1e-24  Score=217.46  Aligned_cols=146  Identities=23%  Similarity=0.353  Sum_probs=121.8

Q ss_pred             ccceeecChHHHHHHHh---hchHHHHHHHHHhhcCCCCCcchhhhHHHHHHHhCCCcccccCCccccCchhhhhhhcCC
Q 024609           91 GIEIEFKPDAKASFLRL---LPLRSISRFWGFLTSVEYPVWMRPYVYKAWARAFHSNLEEAALPLGEYASLREFFVRTLK  167 (265)
Q Consensus        91 ~i~~~~~~~~~~~ll~l---LP~r~iSrl~G~~~~~~lp~~~r~~iik~fik~f~IdL~E~~~pl~~Y~SfndFFtRkLK  167 (265)
                      |++..|++...+-++.-   -.++.+|--.|+-+++..+   .. -|+.|++.|.+||+|.+.|+.+|++|||||+|+||
T Consensus       682 gmR~iY~gk~~~r~~~~k~k~iL~~Ls~kQGkK~dS~~S---ak-~I~pFi~Ff~lnm~ev~~p~~~FKTFNEFFyRkLK  757 (975)
T KOG2419|consen  682 GMRAIYQGKIGLRLMDQKAKEILQTLSEKQGKKMDSVES---AK-QIPPFIEFFKLNMAEVKYPLKHFKTFNEFFYRKLK  757 (975)
T ss_pred             ehhhhhcccccchhhhhhHHHHHHHHHHHhccccCchhh---hh-hcchHHhhhhcchhhhcCccccchhHHHHHHHhcC
Confidence            44556666544333211   1246788888999999976   23 36999999999999999999999999999999999


Q ss_pred             CCCCcCC--CCCCeeEecCCceEEEeeeecCCCceeEeecCCccchhhhcCCCCCCCCCCCC----------ceeeeccc
Q 024609          168 QGSRPID--PDPHCLVSPVDGIVLRVGELKGVGAMIEQVKGFSYSVSSLLGSSSFLPMIEEG----------DMHEQCGE  235 (265)
Q Consensus       168 pgaRPId--~d~~~lVSPaDGkV~~~G~I~~~~~~ieqVKG~tYSL~~LLG~~~~~~~f~~G----------~~h~~~~~  235 (265)
                      ||+|||+  .+++++|||||+++.+|..|++. +.+ ||||..||++.|||.+--.+.|.+|          ||||+|+|
T Consensus       758 PGsRp~a~~nn~dIlvspADsR~~af~~Ie~s-t~~-WIKGrkFsik~Llg~n~n~~~F~dgSi~IfRLAPQDYHRFHsP  835 (975)
T KOG2419|consen  758 PGSRPIACMNNKDILVSPADSRLMAFQSIEDS-TRF-WIKGRKFSIKGLLGYNVNPEAFLDGSIVIFRLAPQDYHRFHSP  835 (975)
T ss_pred             CCCcccCCCCCCceeecccccceEeeeeeccc-ceE-EEeccEEehhHhhCCCCCchhccCCcEEEEEeccchhhhccCc
Confidence            9999996  57889999999999999999974 677 9999999999999988777878776          89999999


Q ss_pred             cCccccc
Q 024609          236 QESSPTE  242 (265)
Q Consensus       236 ~~g~~~~  242 (265)
                      |+|+..-
T Consensus       836 vnG~Igk  842 (975)
T KOG2419|consen  836 VNGVIGK  842 (975)
T ss_pred             ccccccC
Confidence            9998753

>COG0688 Psd Phosphatidylserine decarboxylase [Lipid metabolism]

Probab=99.86  E-value=6.1e-23  Score=186.31  Aligned_cols=125  Identities=37%  Similarity=0.524  Sum_probs=114.9

Q ss_pred             HHHhhchHHHHHHHHHhhcCCCCCcchhhhHHHHHHHhCCCcccccCCccccCchhhhhhhcCCCCCCcCCCCCCeeEec
Q 024609          104 FLRLLPLRSISRFWGFLTSVEYPVWMRPYVYKAWARAFHSNLEEAALPLGEYASLREFFVRTLKQGSRPIDPDPHCLVSP  183 (265)
Q Consensus       104 ll~lLP~r~iSrl~G~~~~~~lp~~~r~~iik~fik~f~IdL~E~~~pl~~Y~SfndFFtRkLKpgaRPId~d~~~lVSP  183 (265)
                      +++++|....++++|+++....|.++....++.|++.|.+|++|++.|++.|.|||+||+|.|+++.||||++   +++|
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fi~~~~v~~~e~~~~~~~~~~~~~~f~r~l~~~~Rp~dp~---~v~P   78 (239)
T COG0688           2 LRYLLPELSLTRLFGLLAGVRSPSPIIKREIYPFIAAFLVDMSEAEKPLEPYASLNEFFTRFLKYFFRPIDPE---RVSP   78 (239)
T ss_pred             cccccchhhhhhhHHHHhhhcCCCceeehhhhhHHHHHHhhHHHhhhhhhHHHHHHHHHHHHHhcccccCCCC---ccCC
Confidence            3568899999999999999998877788889999999999999999888999999999999999999999986   8999


Q ss_pred             CCceEEEeeeecCCCceeEeecCCccchhhhcCCC-CCCCCCCCC----------ceeeeccccCccccc
Q 024609          184 VDGIVLRVGELKGVGAMIEQVKGFSYSVSSLLGSS-SFLPMIEEG----------DMHEQCGEQESSPTE  242 (265)
Q Consensus       184 aDGkV~~~G~I~~~~~~ieqVKG~tYSL~~LLG~~-~~~~~f~~G----------~~h~~~~~~~g~~~~  242 (265)
                      +||+++++|           |||+.||+++||+++ +++..+.+|          |||++|+|++|+..+
T Consensus        79 ~D~~i~~~p-----------akG~~~sv~~ll~~~~el~~~~~~g~~v~i~Lsp~DyHr~haP~~G~i~~  137 (239)
T COG0688          79 ADGRIVVSP-----------ADGRVYSVEELLGPDDELAYGDRDGTRVSIFLSPFDYHRNHAPVDGTIIE  137 (239)
T ss_pred             CCCcEEEec-----------CCCeEEEHHHhcCChhhhccccCCceEEEEEeCcceeeeEeCCCCCEEEE
Confidence            999999988           899999999999955 677788887          899999999999876

>PF02666 PS_Dcarbxylase: Phosphatidylserine decarboxylase; InterPro: IPR003817 Phosphatidylserine decarboxylase plays a pivotal role in the synthesis of phospholipid by the mitochondria

Probab=99.84  E-value=1.2e-21  Score=171.99  Aligned_cols=83  Identities=36%  Similarity=0.669  Sum_probs=76.6

Q ss_pred             hhhhhhhcCCCCCCcCCCCCCeeEecCCceEEEeeeecCCCceeEeecCCccchhhhcCC-CCCCCCCCCC---------
Q 024609          158 LREFFVRTLKQGSRPIDPDPHCLVSPVDGIVLRVGELKGVGAMIEQVKGFSYSVSSLLGS-SSFLPMIEEG---------  227 (265)
Q Consensus       158 fndFFtRkLKpgaRPId~d~~~lVSPaDGkV~~~G~I~~~~~~ieqVKG~tYSL~~LLG~-~~~~~~f~~G---------  227 (265)
                      |||||+|.+|+++|||+++++.|||||||+|+.+++|+++ ..+ ||||.+||+++|||+ +++++.|.+|         
T Consensus         1 f~~FF~r~~r~~~R~i~~~~~~ivSPaDG~v~~~~~i~~~-~~~-~iKg~~y~l~~ll~~~~~~~~~~~~g~~i~i~Lsp   78 (202)
T PF02666_consen    1 FNDFFTRFFRDPARPIPDDPDAIVSPADGKVLVIGEIEED-SLF-QIKGQPYSLRELLGDPSPLAEPFQGGTFIVIYLSP   78 (202)
T ss_pred             ChhHeehhcCCCCCCCCCCCCEEEeCcCcEEEeeEEECCC-ceE-EEecCcCCHHHHhCccccceeccCCceEEEEEcCC
Confidence            7999999999999999999999999999999999999874 455 999999999999998 7788888887         


Q ss_pred             -ceeeeccccCccccc
Q 024609          228 -DMHEQCGEQESSPTE  242 (265)
Q Consensus       228 -~~h~~~~~~~g~~~~  242 (265)
                       |||++|+|++|++.+
T Consensus        79 ~DyHr~haPv~G~v~~   94 (202)
T PF02666_consen   79 FDYHRNHAPVDGRVEE   94 (202)
T ss_pred             CcceEEEecCCEEEEE
Confidence             799999999999976

The substrate phosphatidylserine is synthesized extramitochondrially and must be translocated to the mitochondria prior to decarboxylation []. Phosphatidylserine decarboxylases 4.1.1.65 from EC is responsible for conversion of phosphatidylserine to phosphatidylethanolamine and plays a central role in the biosynthesis of aminophospholipids [].; GO: 0004609 phosphatidylserine decarboxylase activity, 0008654 phospholipid biosynthetic process

>TIGR00164 PS_decarb_rel phosphatidylserine decarboxylase precursor-related protein

Probab=98.57  E-value=6.7e-08  Score=84.86  Aligned_cols=71  Identities=20%  Similarity=0.250  Sum_probs=50.6

Q ss_pred             cCchhhhhhhcCCCCCCcCCCCCCeeEecCCceEEEeeeecCCCceeEeecCCccchhhhcCCCCCCCCCCCCceeeecc
Q 024609          155 YASLREFFVRTLKQGSRPIDPDPHCLVSPVDGIVLRVGELKGVGAMIEQVKGFSYSVSSLLGSSSFLPMIEEGDMHEQCG  234 (265)
Q Consensus       155 Y~SfndFFtRkLKpgaRPId~d~~~lVSPaDGkV~~~G~I~~~~~~ieqVKG~tYSL~~LLG~~~~~~~f~~G~~h~~~~  234 (265)
                      +..|..||.|.   +.||++++++.++|||||+|..++++.+   .+  ..|.-+-+         .=.....|||++|+
T Consensus        15 ~~~~~~~ffR~---p~R~~~~~~~~ivSPaDG~v~~i~~~~~---~~--~~g~~~~i---------~I~Lsp~DyHr~ha   77 (189)
T TIGR00164        15 FTLFTLQFFRD---PDREIPQGPEAVLSPADGRIDVVERARR---PF--PDGDGLKI---------SIFMSPFDVHVNRA   77 (189)
T ss_pred             HHHHHHHhcCC---CCCCCCCCCCEEEeCCCcEEEEEEeecc---cc--CCCcEEEE---------EEEcCCcccceEEc
Confidence            34488888887   6799998999999999999999876543   11  11110111         11345669999999


Q ss_pred             ccCccccc
Q 024609          235 EQESSPTE  242 (265)
Q Consensus       235 ~~~g~~~~  242 (265)
                      |++|++.+
T Consensus        78 P~~G~v~~   85 (189)
T TIGR00164        78 PAGGKVTY   85 (189)
T ss_pred             ccccEEEE
Confidence            99999977

It is unclear whether this protein is a form of phosphatidylserine decarboxylase or is a related enzyme. It is found in Neisseria gonorrhoeae, Mycobacterium tuberculosis, and several archaeal species, all of which lack known phosphatidylserine decarboxylase.

>PRK05305 phosphatidylserine decarboxylase; Provisional

Probab=98.32  E-value=4.1e-07  Score=80.92  Aligned_cols=68  Identities=22%  Similarity=0.250  Sum_probs=50.4

Q ss_pred             hhhhhhhcCCCCCCcCCCCCCeeEecCCceEEEeeeecCCCceeEeecCCccchhhhcCCCCCCCCCCCCceeeeccccC
Q 024609          158 LREFFVRTLKQGSRPIDPDPHCLVSPVDGIVLRVGELKGVGAMIEQVKGFSYSVSSLLGSSSFLPMIEEGDMHEQCGEQE  237 (265)
Q Consensus       158 fndFFtRkLKpgaRPId~d~~~lVSPaDGkV~~~G~I~~~~~~ieqVKG~tYSL~~LLG~~~~~~~f~~G~~h~~~~~~~  237 (265)
                      |..||.|.  | .||++++++.++|||||+|..+++++++  .+    |     +++++   ..=.....+||++|+|++
T Consensus        37 ~~~~ffRd--p-~R~~~~~~~~i~SPaDG~v~~i~~v~d~--~~----~-----~~~~~---i~i~lsp~d~H~~~aP~~   99 (206)
T PRK05305         37 FCLYFFRD--P-ERVIPTDDGLVVSPADGKVVVIEEVVPP--YG----D-----EPRLR---ISIFMSVFNVHVNRAPVS   99 (206)
T ss_pred             HHHheecC--C-CCCCCCCCCEEEeCCCcEEEEEEEECCC--cc----C-----CceEE---EEEEECcccCCEEEeCcc
Confidence            77889998  3 7999989999999999999999998852  11    1     11111   111233559999999999


Q ss_pred             ccccc
Q 024609          238 SSPTE  242 (265)
Q Consensus       238 g~~~~  242 (265)
                      |++.+
T Consensus       100 G~V~~  104 (206)
T PRK05305        100 GTVTK  104 (206)
T ss_pred             CEEEE
Confidence            99976

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00