Citrus Sinensis ID: 024631

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-----
Protein Sequence
MAVELMGFPKRMMEDQTAIQEAATQGIKSMEHLIRLMSHHQSSNHVDCSDLTDLTVSKFKKVISLLNRTGHARFRRGPVHSSPSSSSASAPAAAASGNSPHTQTLTLTPPAPTMAVAPSTASYVQSQPHSLTLDFTKPSLFSGNVKSTELEFSKDSFCVSSNSSFMSSAITGDGSVSNGKQGGSSIFLAPQAPAVSAGKPPLAAQPYKKRCQDHKDHSDDLSGKFSGSTSGNNKCHCSKRRYVLSNFTFGTFSHRHTLQIFTENF
Secondary Structure (PSIPRED)
ccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEccccc
Secondary Structure Prediction (SSPRO)
ccHHHHccccccHHHHHHHHHHHHHcHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHcccccEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEccccccccccccccEEEEEccccccccccccccccccccccccccccccccccccHcccccccccccccccccccccccccccccccccEEEEEcccccccccccEEEEEcccc
Coil and Loop (DISEMBL)
mavelmgfpkrmmEDQTAIQEAATQGIKSMEHLIRLMShhqssnhvdcsdltdltVSKFKKVISLLNRtgharfrrgpvhsspssssasapaaaasgnsphtqtltltppaptmavapstasyvqsqphsltldftkpslfsgnvkstelefskdsfcvssnssfmssaitgdgsvsngkqggssiflapqapavsagkpplaaqpykkrcqdhkdhsddlsgkfsgstsgnnkchcskrryvlsnftfgtfshrhtLQIFTENF
Flexible Loop (DISEMBL)
mavelmgfpkrmmEDQTAIQEAATQGIKSMEHLIRLMSHHQSSNHVDCSDLTDLTVSKFKKVISLLnrtgharfrrgpvhsspssSSASAPAAAASGNSPHTQTLTLTPPAPTMAVAPSTASYVQSQPHSLTLDFTKPSLFSGNVKSTELEFSKDSFCVSSNSSFMSSAITGDGSVSNGKQGGSSIFLAPQAPAVSAGKPPLAAQPYKKRCQDHKDHSDDLSgkfsgstsgnnkchcSKRRYVLSNFTfgtfshrhtlqiftenf
Low Complexity Region (SEG)
MAVELMGFPKRMMEDQTAIQEAATQGIKSMEHLIRLMSHHQSSNHVDCSDLTDLTVSKFKKVISLLNRTGHARFRRGPVHsspssssasapaaaasGNSPHtqtltltppaptmavapstaSYVQSQPHSLTLDFTKPSLFSGNVKSTELEfskdsfcvssnssfmssAITGDGSVSNGKQGGSSIFLAPQAPAVSAGKPPLAAQPYKKRCQDHKDHSDDLSGKFSGSTSGNNKCHCSKRRYVLSNFTFGTFSHRHTLQIFTENF
Disordered region (IsUnstruct)
********************************LIRL********HVDCSDLTDLTVSKFKKVISLLNRTG********************************************************************************************************************************************************************CHCSKRRYVLSNFTFGTFSHRHTLQIF****
Disordered Region (DISOPRED)
MAVEL**FPKR*MEDQTAIQEAATQGIKSMEHLI******************DLTVSKFKKVISLLNRT***********************************************************************************************************************************************************************CSKRRYVLSNFTFGTFSHRHTLQIFTEN*
Disordered Region (DISEMBL)
MAVELMGFPKRMMEDQTAIQEAATQGIKSMEHLIRLMSHHQSSNHVDCSDLTDLTVSKFKKVISLLNRTGHARFR***************************QTLTLTPPAPTMA*************HSLTLDFTKPSLFSGNVKSTELEFSKDSFCVSSNSSFMSSAITGDGSVSNGKQGGSSIFLAPQAPA***************************************KCHCSKRRYVLSNFTFGTFSHRHTLQIFTENF
Disordered Region (DISPRO)
****LMGFPKRMMEDQTAIQEAATQGIKSMEHLIRLMSHHQSSNHVDCSDLTDLTVSKFKKVISLLNRTGHARFRRGPV****************************************************TLD**KPS********TELEF*KDSFCVSSNSSFMSSAITGD*************************************************************CHCSKRRYVLSNFTFGTFSHRHTLQIFTENF
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAVELMGFPKRMMEDQTAIQEAATQGIKSMEHLIRLMSHHQSSNHVDCSDLTDLTVSKFKKVISLLNRTGHARFRRGPVHSSPSSSSASAPAAAASGNSPHTQTLTLTPPAPTMAVAPSTASYVQSQPHSLTLDFTKPSLFSGNVKSTELEFSKDSFCVSSNSSFMSSAITGDGSVSNGKQGGSSIFLAPQAPAVSAGKPPLAAQPYKKRCQDHKDHSDDLSGKFSGSTSGNNKCHCSKRRYVLSNFTFGTFSHRHTLQIFTENF
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	265	2.2.26 [Sep-21-2011]
Q9SV15	325	Probable WRKY transcripti	yes	no	0.833	0.68	0.573	7e-66
Q9SJA8	321	Probable WRKY transcripti	no	no	0.818	0.676	0.583	5e-59
O22176	317	Probable WRKY transcripti	no	no	0.301	0.252	0.450	3e-10

>sp|Q9SV15|WRK11_ARATH Probable WRKY transcription factor 11 OS=Arabidopsis thaliana GN=WRKY11 PE=2 SV=2

 Score =  250 bits (639), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 140/244 (57%), Positives = 167/244 (68%), Gaps = 23/244 (9%)

Query: 1   MAVELMGFPKRMMEDQTAIQEAATQGIKSMEHLIRLMSHHQSSNH-VDCSDLTDLTVSKF 59
           MAV+LM FPK  ++DQTAIQEAA+QG++SMEHLIR++S+     H VDCS++TD TVSKF
Sbjct: 1   MAVDLMRFPK--IDDQTAIQEAASQGLQSMEHLIRVLSNRPEQQHNVDCSEITDFTVSKF 58

Query: 60  KKVISLLNRTGHARFRRGPVHSSPSSSSASAPAAAASGNSPHTQTLTLTPPAPTMAVAPS 119
           K VISLLNRTGHARFRRGPVHS+ S++S    +       P    +  T   P +   PS
Sbjct: 59  KTVISLLNRTGHARFRRGPVHSTSSAASQKLQSQIVKNTQPEAPIVRTTTNHPQIVPPPS 118

Query: 120 TASYVQSQPHSLTLDFTKPSLFSGNVKSTELEFSKDSFCVSSNSSFMSSAITGDGSVSNG 179
                     S+TLDF+KPS+F    KS ELEFSK++F VS NSSFMSSAITGDGSVSNG
Sbjct: 119 ----------SVTLDFSKPSIFGTKAKSAELEFSKENFSVSLNSSFMSSAITGDGSVSNG 168

Query: 180 KQGGSSIFL--APQAPAVSAGKPPLAAQPYKKRCQDHKDHSDDLSGKFSGSTSGNNKCHC 237
           K     IFL  AP  P  S+GKPPLA  PY+KRC +H +HS+  SGK SGS  G  KCHC
Sbjct: 169 K-----IFLASAPLQPVNSSGKPPLAGHPYRKRCLEH-EHSESFSGKVSGSAYG--KCHC 220

Query: 238 SKRR 241
            K R
Sbjct: 221 KKSR 224

Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element.
Arabidopsis thaliana (taxid: 3702)

>sp|Q9SJA8|WRK17_ARATH Probable WRKY transcription factor 17 OS=Arabidopsis thaliana GN=WRKY17 PE=2 SV=2

 Score =  228 bits (580), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 143/245 (58%), Positives = 173/245 (70%), Gaps = 28/245 (11%)

Query: 1   MAVELMGFPKRMMEDQTAIQEAATQGIKSMEHLIRLMSHHQSSNHVDCSDLTDLTVSKFK 60
           M V++M  PK  MEDQTAIQEAA+QG+KSMEHLIR++S+     +VDCS++TD TVSKFK
Sbjct: 1   MTVDIMRLPK--MEDQTAIQEAASQGLKSMEHLIRVLSNRPEERNVDCSEITDFTVSKFK 58

Query: 61  KVISLLNRTGHARFRRGPVHSSPSSSSASAPAAAASGNSPHTQTLTLTPPAPTMAVAPST 120
           KVISLLNR+GHARFRRG                 +  +S     + +T PAPT   AP+ 
Sbjct: 59  KVISLLNRSGHARFRRG--------------PVHSPPSSSVPPPVKVTTPAPTQISAPAP 104

Query: 121 ASYVQSQPHSLTLDFTKPSLFSGNVKSTE-LEFSKDSFCVSSNSSFMSSAITGDGSVSNG 179
            S+VQ+   S+TLDFT+PS+F    KS+E +EF+K+SF VSSNSSFMSSAITGDGSVS  
Sbjct: 105 VSFVQANQQSVTLDFTRPSVFGAKTKSSEVVEFAKESFSVSSNSSFMSSAITGDGSVSK- 163

Query: 180 KQGGSSIFLAPQAPAV---SAGKPPLAAQPYKKRCQDHKDHSDDLSGKFSGSTSGNNKCH 236
              GSSIFLAP APAV   S+GKPPL+  PY+KRC +H DHS+  SGK SG  SGN KCH
Sbjct: 164 ---GSSIFLAP-APAVPVTSSGKPPLSGLPYRKRCFEH-DHSEGFSGKISG--SGNGKCH 216

Query: 237 CSKRR 241
           C K R
Sbjct: 217 CKKSR 221

Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element.

Arabidopsis thaliana (taxid: 3702)

>sp|O22176|WRK15_ARATH Probable WRKY transcription factor 15 OS=Arabidopsis thaliana GN=WRKY15 PE=2 SV=1

 Score = 65.9 bits (159), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 46/102 (45%), Positives = 57/102 (55%), Gaps = 22/102 (21%)

Query: 1   MAVELM--GFPKRMMEDQTAIQEAATQGIKSMEHLIRLMSHH-----------QSSNHVD 47
           MAVELM   +   +  D  A+QEAA  G+KS+E+ I LMS              S++   
Sbjct: 1   MAVELMTRNYISGVGADSFAVQEAAASGLKSIENFIGLMSRDSFNSDQPSSSSASASASA 60

Query: 48  CSDL-------TDLTVSKFKKVISLLN--RTGHARFRRGPVH 80
            +DL        D  VSKFK+VISLL+  RTGHARFRR PVH
Sbjct: 61  AADLESARNTTADAAVSKFKRVISLLDRTRTGHARFRRAPVH 102

Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	265
449437056	350	PREDICTED: probable WRKY transcription f	0.879	0.665	0.638	3e-71
22329054	324	putative WRKY transcription factor 11 [A	0.833	0.682	0.573	1e-64
302399127	341	WRKY domain class transcription factor [	0.864	0.671	0.614	3e-64
30689072	325	putative WRKY transcription factor 11 [A	0.833	0.68	0.573	4e-64
21537078	324	putaive DNA-binding protein [Arabidopsis	0.833	0.682	0.573	4e-64
16604573	325	putative putaive DNA-binding protein [Ar	0.833	0.68	0.573	4e-64
297798820	335	WRKY transcription factor 11 [Arabidopsi	0.852	0.674	0.578	9e-64
312282033	341	unnamed protein product [Thellungiella h	0.875	0.680	0.590	7e-63
255548594	321	WRKY transcription factor, putative [Ric	0.822	0.679	0.681	1e-62
45479882	333	WRKY transcription factor 11 [Capsella r	0.837	0.666	0.556	1e-61

>gi|449437056|ref|XP_004136308.1| PREDICTED: probable WRKY transcription factor 11-like [Cucumis sativus] gi|449525016|ref|XP_004169517.1| PREDICTED: probable WRKY transcription factor 11-like [Cucumis sativus] gi|315613822|gb|ADU52516.1| WRKY protein [Cucumis sativus]

 Score =  274 bits (700), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 164/257 (63%), Positives = 190/257 (73%), Gaps = 24/257 (9%)

Query: 1   MAVELMGFPKRMMEDQTAIQEAATQGIKSMEHLIRLMSHHQSSNHVDCSDLTDLTVSKFK 60
           MAV+LM FPK  M+DQ AIQEAA+QG+KSMEHLIRL+SH QSSNHVDCSDLTD TVSKFK
Sbjct: 1   MAVDLMSFPK--MDDQIAIQEAASQGLKSMEHLIRLLSHKQSSNHVDCSDLTDATVSKFK 58

Query: 61  KVISLLNRTGHARFRRGPV------------HSSPSSSSASAPAAAASGNSPHTQTLTLT 108
           KVISLLNRTGHARFRRGPV            H S + +    P    S   P+   L  T
Sbjct: 59  KVISLLNRTGHARFRRGPVSSTSSSSSGSSAHLSQNQAMTLTPTPFTS--PPNVPALPFT 116

Query: 109 PPA----PTMAVAPSTASYVQSQPHSLTLDFTKPSLFSGNVKSTELEFSKDSFCVSSNSS 164
            PA    P   V  + A+++ SQP S+TLDFT+P++ + N K  +LEFSK++F VSS+SS
Sbjct: 117 APATVAQPQTKVVATAANFL-SQPQSMTLDFTRPNILNSNPKGADLEFSKETFSVSSSSS 175

Query: 165 FMSSAITGDGSVSNGKQGGSSIFLAPQAPAVSAGKPPLAAQPYKKRCQDHKDHSDDLSGK 224
           FMSSAITGDGSVSNGK  G+SIFLAP AP  S GKPPL+A PYKKRC +H DHS+DLSGK
Sbjct: 176 FMSSAITGDGSVSNGKL-GTSIFLAP-APTASGGKPPLSAAPYKKRCHEH-DHSEDLSGK 232

Query: 225 FSGSTSGNNKCHCSKRR 241
           FSGSTS + KCHCSKRR
Sbjct: 233 FSGSTSISGKCHCSKRR 249

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|22329054|ref|NP_567878.2| putative WRKY transcription factor 11 [Arabidopsis thaliana] gi|15384215|gb|AAK96194.1|AF404856_1 WRKY transcription factor 11 [Arabidopsis thaliana] gi|5262766|emb|CAB45914.1| putaive DNA-binding protein [Arabidopsis thaliana] gi|7270058|emb|CAB79873.1| putaive DNA-binding protein [Arabidopsis thaliana] gi|24762195|gb|AAN64164.1| putative WRKY family transcription factor [Arabidopsis thaliana] gi|332660528|gb|AEE85928.1| putative WRKY transcription factor 11 [Arabidopsis thaliana]

 Score =  252 bits (644), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 140/244 (57%), Positives = 168/244 (68%), Gaps = 23/244 (9%)

Query: 1   MAVELMGFPKRMMEDQTAIQEAATQGIKSMEHLIRLMSHHQSSNH-VDCSDLTDLTVSKF 59
           MAV+LM FPK  ++DQTAIQEAA+QG++SMEHLIR++S+     H VDCS++TD TVSKF
Sbjct: 1   MAVDLMRFPK--IDDQTAIQEAASQGLQSMEHLIRVLSNRPEQQHNVDCSEITDFTVSKF 58

Query: 60  KKVISLLNRTGHARFRRGPVHSSPSSSSASAPAAAASGNSPHTQTLTLTPPAPTMAVAPS 119
           K VISLLNRTGHARFRRGPVHS+ S++S    +       P    +  T   P +   PS
Sbjct: 59  KTVISLLNRTGHARFRRGPVHSTSSAASQKLQSQIVKNTQPEAPIVRTTTNHPQIVPPPS 118

Query: 120 TASYVQSQPHSLTLDFTKPSLFSGNVKSTELEFSKDSFCVSSNSSFMSSAITGDGSVSNG 179
                     S+TLDF+KPS+F    KS ELEFSK++F VS NSSFMSSAITGDGSVSNG
Sbjct: 119 ----------SVTLDFSKPSIFGTKAKSAELEFSKENFSVSLNSSFMSSAITGDGSVSNG 168

Query: 180 KQGGSSIFL--APQAPAVSAGKPPLAAQPYKKRCQDHKDHSDDLSGKFSGSTSGNNKCHC 237
           K     IFL  AP  P  S+GKPPLA  PY+KRC +H +HS+  SGK SGS  G  KCHC
Sbjct: 169 K-----IFLASAPLQPVNSSGKPPLAGHPYRKRCLEH-EHSESFSGKVSGSAYG--KCHC 220

Query: 238 SKRR 241
            KR+
Sbjct: 221 KKRK 224

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|302399127|gb|ADL36858.1| WRKY domain class transcription factor [Malus x domestica]

 Score =  251 bits (640), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 161/262 (61%), Positives = 186/262 (70%), Gaps = 33/262 (12%)

Query: 1   MAVELMGFPKRMMEDQTAIQEAATQGIKSMEHLIRLMSHHQS-----SNHVDCSDLTDLT 55
           M VELM FPK  MEDQ AIQEAA+QG++SMEHLIR +SH Q      S  +DC+D+TD T
Sbjct: 1   MTVELMNFPK--MEDQKAIQEAASQGLQSMEHLIRFLSHQQQHPNNQSARLDCTDITDHT 58

Query: 56  VSKFKKVISLLNRTGHARFRRGPVHSSPSSSSASAPAAAASGNSPHTQTLTLTPP---AP 112
           VSKFKKVISLLNRTGHARFRRGP       +    P   +S +   +QTL+L P     P
Sbjct: 59  VSKFKKVISLLNRTGHARFRRGP-------AQPVHPVHFSSSHPSPSQTLSLAPALNLTP 111

Query: 113 TMAVAPSTA-----------SYVQSQPHSLTLDFTKPSLFSGNVKSTELEFSKDSFCVSS 161
           T A  P TA           S+ QSQPHS+TLDFT+P+ F+ N+KS E+EF+KD+F VSS
Sbjct: 112 TPASVPVTAPAVVQQATIESSFGQSQPHSMTLDFTRPNAFASNLKSAEIEFAKDNFSVSS 171

Query: 162 NSSFMSSAITGDGSVSNGKQGGSSIFLAPQAPAVSAGKPPLAAQPYKKRCQDHKDHSDDL 221
            SSFMSSAITGDGSVSNGK  GSSIFLAP APAVS  KPPL+  P+KKRC +H DHSDD 
Sbjct: 172 GSSFMSSAITGDGSVSNGKL-GSSIFLAP-APAVSGAKPPLSTAPFKKRCHEH-DHSDDT 228

Query: 222 SGKF--SGSTSGNNKCHCSKRR 241
           S KF  SGS SG+ KCHCSKRR
Sbjct: 229 SCKFSASGSASGSGKCHCSKRR 250

Source: Malus x domestica

Species: Malus x domestica

Genus: Malus

Family: Rosaceae

Order: Rosales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|30689072|ref|NP_849559.1| putative WRKY transcription factor 11 [Arabidopsis thaliana] gi|39932735|sp|Q9SV15.2|WRK11_ARATH RecName: Full=Probable WRKY transcription factor 11; AltName: Full=WRKY DNA-binding protein 11 gi|23297314|gb|AAN12939.1| putative DNA-binding protein [Arabidopsis thaliana] gi|332660527|gb|AEE85927.1| putative WRKY transcription factor 11 [Arabidopsis thaliana]

 Score =  250 bits (639), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 140/244 (57%), Positives = 167/244 (68%), Gaps = 23/244 (9%)

Query: 1   MAVELMGFPKRMMEDQTAIQEAATQGIKSMEHLIRLMSHHQSSNH-VDCSDLTDLTVSKF 59
           MAV+LM FPK  ++DQTAIQEAA+QG++SMEHLIR++S+     H VDCS++TD TVSKF
Sbjct: 1   MAVDLMRFPK--IDDQTAIQEAASQGLQSMEHLIRVLSNRPEQQHNVDCSEITDFTVSKF 58

Query: 60  KKVISLLNRTGHARFRRGPVHSSPSSSSASAPAAAASGNSPHTQTLTLTPPAPTMAVAPS 119
           K VISLLNRTGHARFRRGPVHS+ S++S    +       P    +  T   P +   PS
Sbjct: 59  KTVISLLNRTGHARFRRGPVHSTSSAASQKLQSQIVKNTQPEAPIVRTTTNHPQIVPPPS 118

Query: 120 TASYVQSQPHSLTLDFTKPSLFSGNVKSTELEFSKDSFCVSSNSSFMSSAITGDGSVSNG 179
                     S+TLDF+KPS+F    KS ELEFSK++F VS NSSFMSSAITGDGSVSNG
Sbjct: 119 ----------SVTLDFSKPSIFGTKAKSAELEFSKENFSVSLNSSFMSSAITGDGSVSNG 168

Query: 180 KQGGSSIFL--APQAPAVSAGKPPLAAQPYKKRCQDHKDHSDDLSGKFSGSTSGNNKCHC 237
           K     IFL  AP  P  S+GKPPLA  PY+KRC +H +HS+  SGK SGS  G  KCHC
Sbjct: 169 K-----IFLASAPLQPVNSSGKPPLAGHPYRKRCLEH-EHSESFSGKVSGSAYG--KCHC 220

Query: 238 SKRR 241
            K R
Sbjct: 221 KKSR 224

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|21537078|gb|AAM61419.1| putaive DNA-binding protein [Arabidopsis thaliana]

 Score =  250 bits (639), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 140/244 (57%), Positives = 167/244 (68%), Gaps = 23/244 (9%)

Query: 1   MAVELMGFPKRMMEDQTAIQEAATQGIKSMEHLIRLMSHHQSSNH-VDCSDLTDLTVSKF 59
           MAV+LM FPK  ++DQTAIQEAA+QG++SMEHLIR++S+     H VDCS++TD TVSKF
Sbjct: 1   MAVDLMRFPK--IDDQTAIQEAASQGLQSMEHLIRVLSNRPEQQHNVDCSEITDFTVSKF 58

Query: 60  KKVISLLNRTGHARFRRGPVHSSPSSSSASAPAAAASGNSPHTQTLTLTPPAPTMAVAPS 119
           K VISLLNRTGHARFRRGPVHS+ S++S    +       P    +  T   P +   PS
Sbjct: 59  KTVISLLNRTGHARFRRGPVHSTSSAASQKLQSQIVKNTQPEAPIVRTTTNHPQIVPPPS 118

Query: 120 TASYVQSQPHSLTLDFTKPSLFSGNVKSTELEFSKDSFCVSSNSSFMSSAITGDGSVSNG 179
                     S+TLDF+KPS+F    KS ELEFSK++F VS NSSFMSSAITGDGSVSNG
Sbjct: 119 ----------SVTLDFSKPSIFGTKAKSAELEFSKENFSVSLNSSFMSSAITGDGSVSNG 168

Query: 180 KQGGSSIFL--APQAPAVSAGKPPLAAQPYKKRCQDHKDHSDDLSGKFSGSTSGNNKCHC 237
           K     IFL  AP  P  S+GKPPLA  PY+KRC +H +HS+  SGK SGS  G  KCHC
Sbjct: 169 K-----IFLASAPLQPVNSSGKPPLAGHPYRKRCLEH-EHSESFSGKVSGSAYG--KCHC 220

Query: 238 SKRR 241
            K R
Sbjct: 221 KKSR 224

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|16604573|gb|AAL24088.1| putative putaive DNA-binding protein [Arabidopsis thaliana]

 Score =  250 bits (639), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 140/244 (57%), Positives = 167/244 (68%), Gaps = 23/244 (9%)

Query: 1   MAVELMGFPKRMMEDQTAIQEAATQGIKSMEHLIRLMSHHQSSNH-VDCSDLTDLTVSKF 59
           MAV+LM FPK  ++DQTAIQEAA+QG++SMEHLIR++S+     H VDCS++TD TVSKF
Sbjct: 1   MAVDLMRFPK--IDDQTAIQEAASQGLQSMEHLIRVLSNRPEQQHNVDCSEITDFTVSKF 58

Query: 60  KKVISLLNRTGHARFRRGPVHSSPSSSSASAPAAAASGNSPHTQTLTLTPPAPTMAVAPS 119
           K VISLLNRTGHARFRRGPVHS+ S++S    +       P    +  T   P +   PS
Sbjct: 59  KTVISLLNRTGHARFRRGPVHSTSSAASQKLQSQIVKNTQPEAPIVRTTTNHPQIVPPPS 118

Query: 120 TASYVQSQPHSLTLDFTKPSLFSGNVKSTELEFSKDSFCVSSNSSFMSSAITGDGSVSNG 179
                     S+TLDF+KPS+F    KS ELEFSK++F VS NSSFMSSAITGDGSVSNG
Sbjct: 119 ----------SVTLDFSKPSIFGTKAKSAELEFSKENFSVSLNSSFMSSAITGDGSVSNG 168

Query: 180 KQGGSSIFL--APQAPAVSAGKPPLAAQPYKKRCQDHKDHSDDLSGKFSGSTSGNNKCHC 237
           K     IFL  AP  P  S+GKPPLA  PY+KRC +H +HS+  SGK SGS  G  KCHC
Sbjct: 169 K-----IFLASAPLQPVNSSGKPPLAGHPYRKRCLEH-EHSESFSGKVSGSAYG--KCHC 220

Query: 238 SKRR 241
            K R
Sbjct: 221 KKSR 224

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297798820|ref|XP_002867294.1| WRKY transcription factor 11 [Arabidopsis lyrata subsp. lyrata] gi|297313130|gb|EFH43553.1| WRKY transcription factor 11 [Arabidopsis lyrata subsp. lyrata]

 Score =  249 bits (636), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 144/249 (57%), Positives = 172/249 (69%), Gaps = 23/249 (9%)

Query: 1   MAVELMGFPKRMMEDQTAIQEAATQGIKSMEHLIRLMSHHQSSNH-VDCSDLTDLTVSKF 59
           MAV+LM FPK  M+DQTAIQEAA+QG++SMEHLIR++S+     H VDCS++TD TVSKF
Sbjct: 1   MAVDLMRFPK--MDDQTAIQEAASQGLQSMEHLIRVLSNRPEQQHNVDCSEITDFTVSKF 58

Query: 60  KKVISLLNRTGHARFRRGPVHSSPSSSSASAPAAAASGNSPHTQTLTLTPPAPTMA---- 115
           K VISLLNRTGHARFRRGPVHS+ S    S         +P      +T PA T      
Sbjct: 59  KTVISLLNRTGHARFRRGPVHSTSSPKQQSQIVKTIQPKAP-----VVTQPARTTTNLPQ 113

Query: 116 VAPSTASYVQSQPHSLTLDFTKPSLFSGNVKSTELEFSKDSFCVSSNSSFMSSAITGDGS 175
           + P  +S+V S   S+TLDF+KPS+F    KS++LEFSK++F VS NSSFMSS ITGDGS
Sbjct: 114 IVPPPSSFVHSNQPSVTLDFSKPSVFGTKAKSSDLEFSKENFSVSLNSSFMSSGITGDGS 173

Query: 176 VSNGKQGGSSIFL--APQAPAVSAGKPPLAA-QPYKKRCQDHKDHSDDLSGKFSGSTSGN 232
           VSNGK     IFL  AP  P  S+GKPPLAA  PY+KRC +H +HS+  SGK SG  SG 
Sbjct: 174 VSNGK-----IFLASAPSQPVNSSGKPPLAAGHPYRKRCLEH-EHSESFSGKVSG--SGY 225

Query: 233 NKCHCSKRR 241
            KCHC K R
Sbjct: 226 GKCHCKKSR 234

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|312282033|dbj|BAJ33882.1| unnamed protein product [Thellungiella halophila]

 Score =  246 bits (628), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 147/249 (59%), Positives = 178/249 (71%), Gaps = 17/249 (6%)

Query: 1   MAVELMGFPKRMMEDQTAIQEAATQGIKSMEHLIRLMS-----HHQSSNHVDCSDLTDLT 55
           MAV+LM FPK MM+DQ AIQEAA+QG++SM+HLIR++S     H+ ++N+VDCS LTD T
Sbjct: 1   MAVDLMRFPK-MMDDQKAIQEAASQGLQSMDHLIRILSNRPEQHNNNNNNVDCSQLTDFT 59

Query: 56  VSKFKKVISLLNRTGHARFRRGPVHSSPSSSSASAPAAAASGNSPHTQTLTLT---PPAP 112
           VSKFK VISLLNRTG ARFRR PVHSSP    +     AA   +P   T  L+   PP P
Sbjct: 60  VSKFKTVISLLNRTGRARFRRAPVHSSPLKQQSQLVNIAAPPETPTRTTANLSQIVPPPP 119

Query: 113 TMAVAPSTASYVQSQPHSLTLDFTKPSLFSGNVKSTELEFSKDSFCVSSNSSFMSSAITG 172
             +V  + +S+V S   S+TLDFTKPS+F    KS+ELEF+K+SF VS NSS+MSSAITG
Sbjct: 120 QPSVVVTPSSFVHSNQPSVTLDFTKPSIFGSKSKSSELEFAKESFSVSLNSSYMSSAITG 179

Query: 173 DGSVSNGKQGGSSIFLAPQAPAVSAGKPPLAAQPYKKRCQDHKDHSDDLSGKFSGSTSGN 232
           DGSVS     GSSIFL   AP  S+GKPPLA  PY+KRC +H +HS+D SGK SG  SG+
Sbjct: 180 DGSVSK----GSSIFLG-SAPVNSSGKPPLAGHPYRKRCLEH-EHSEDFSGKISG--SGH 231

Query: 233 NKCHCSKRR 241
            KCHC K R
Sbjct: 232 GKCHCKKSR 240

Source: Thellungiella halophila

Species: Eutrema halophilum

Genus: Eutrema

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255548594|ref|XP_002515353.1| WRKY transcription factor, putative [Ricinus communis] gi|223545297|gb|EEF46802.1| WRKY transcription factor, putative [Ricinus communis]

 Score =  245 bits (626), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 167/245 (68%), Positives = 185/245 (75%), Gaps = 27/245 (11%)

Query: 1   MAVELMGFPKRMMEDQTAIQEAATQGIKSMEHLIRLMSHHQSSNHVDCSDLTDLTVSKFK 60
           MAVELM F K  MEDQ AIQEAA+QG+KSMEHLIRLMSH   SNHVDC+DLTDLTVSKF+
Sbjct: 1   MAVELMSFAK--MEDQMAIQEAASQGLKSMEHLIRLMSH--KSNHVDCTDLTDLTVSKFR 56

Query: 61  KVISLLNRTGHARFRRGPVHSSPSSSSASAPAAAASGNSPHTQTLTLTPPAPTMAVAPST 120
           KVISLLNRTGHARFRRGPV SS   SSA AP+A+ S N   T+       AP   V P T
Sbjct: 57  KVISLLNRTGHARFRRGPVQSSSCLSSAPAPSASQSINLNTTRIAAPP--APAPGVHPVT 114

Query: 121 ---ASYVQSQPHSLTLDFTKPSLFSGNVKSTELEFSKDSFCVSSNSSFMSSAITGDGSVS 177
              AS+VQ QP S+TLDFTKP++FS N KS+ELEFS      SS+SSFMSSAITGDGSVS
Sbjct: 115 APAASFVQ-QPQSVTLDFTKPNIFSSNGKSSELEFSV-----SSSSSFMSSAITGDGSVS 168

Query: 178 NGKQGGSSIFLAPQAPAVSAGKPPLAAQPY-KKRCQDHKDHSDDLSGKFSGSTSGNNKCH 236
           NGKQ GSSIFL   APAVS GKPPL++ PY KKRC +H DHS+D+SG  SG      KCH
Sbjct: 169 NGKQ-GSSIFL---APAVSGGKPPLSSAPYNKKRCHEH-DHSEDVSGSASG------KCH 217

Query: 237 CSKRR 241
           CSKRR
Sbjct: 218 CSKRR 222

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|45479882|gb|AAS66779.1| WRKY transcription factor 11 [Capsella rubella]

 Score =  242 bits (617), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 139/250 (55%), Positives = 171/250 (68%), Gaps = 28/250 (11%)

Query: 1   MAVELMGFPKRMMEDQTAIQEAATQGIKSMEHLIRLMSHHQSSNH-VDCSDLTDLTVSKF 59
           MAV+LM FPK  ++DQTAIQEAA+QG++SMEHLIR++S+     H VDCS++TD TVSKF
Sbjct: 1   MAVDLMRFPK--IDDQTAIQEAASQGLQSMEHLIRVLSNRPEQQHTVDCSEITDFTVSKF 58

Query: 60  KKVISLLNRTGHARFRRGPVHSSPSSSS------ASAPAAAASGNSPHTQTLTLTPPAPT 113
           K VISLLNRTGHARFRRGPV SSP  S        +AP  +    +  T  L+ T P P+
Sbjct: 59  KTVISLLNRTGHARFRRGPVRSSPVVSPPLPQIVKTAPIVSQPLRT--TTNLSQTAPPPS 116

Query: 114 MAVAPSTASYVQSQPHSLTLDFTKPSLFSGNVKSTELEFSKDSFCVSSNSSFMSSAITGD 173
             V P        QP     DF+KP++F    KS++LEFSK++F VS NSS+MSSAITGD
Sbjct: 117 SFVLPR-------QPRRSHSDFSKPTIFGSKSKSSDLEFSKENFSVSLNSSYMSSAITGD 169

Query: 174 GSVSNGKQGGSSIFL--APQAPAVSAGKPPLAAQPYKKRCQDHKDHSDDLSGKFSGSTSG 231
           GSVSNGK     IFL  AP  P  S+GKPPLA  PY+KRC +H +HS+  SG+ SG  SG
Sbjct: 170 GSVSNGK-----IFLASAPSQPVTSSGKPPLAGHPYRKRCLEH-EHSESFSGRVSG--SG 221

Query: 232 NNKCHCSKRR 241
           + KCHC KR+
Sbjct: 222 HGKCHCKKRK 231

Source: Capsella rubella

Species: Capsella rubella

Genus: Capsella

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	265
TAIR|locus:2046653	321	WRKY17 "WRKY DNA-binding prote	0.294	0.242	0.725	2e-55
TAIR|locus:2125239	325	WRKY11 "WRKY DNA-binding prote	0.833	0.68	0.495	2.4e-51
TAIR|locus:2135967	353	WRKY7 "WRKY DNA-binding protei	0.267	0.201	0.456	4.5e-13
TAIR|locus:2058568	317	WRKY15 "WRKY DNA-binding prote	0.105	0.088	0.766	1.1e-06

TAIR|locus:2046653 WRKY17 "WRKY DNA-binding protein 17" [Arabidopsis thaliana (taxid:3702)]

 Score = 299 (110.3 bits), Expect = 2.0e-55, Sum P(2) = 2.0e-55
 Identities = 58/80 (72%), Positives = 69/80 (86%)

Query:     1 MAVELMGFPKRMMEDQTAIQEAATQGIKSMEHLIRLMSHHQSSNHVDCSDLTDLTVSKFK 60
             M V++M  PK  MEDQTAIQEAA+QG+KSMEHLIR++S+     +VDCS++TD TVSKFK
Sbjct:     1 MTVDIMRLPK--MEDQTAIQEAASQGLKSMEHLIRVLSNRPEERNVDCSEITDFTVSKFK 58

Query:    61 KVISLLNRTGHARFRRGPVH 80
             KVISLLNR+GHARFRRGPVH
Sbjct:    59 KVISLLNRSGHARFRRGPVH 78

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM;IC

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;ISS

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0005516 "calmodulin binding" evidence=IDA

GO:0042742 "defense response to bacterium" evidence=IEP

GO:0010200 "response to chitin" evidence=IEP

GO:0006865 "amino acid transport" evidence=RCA

TAIR|locus:2125239 WRKY11 "WRKY DNA-binding protein 11" [Arabidopsis thaliana (taxid:3702)]

 Score = 533 (192.7 bits), Expect = 2.4e-51, P = 2.4e-51
 Identities = 121/244 (49%), Positives = 141/244 (57%)

Query:     1 MAVELMGFPKRMMEDQTAIQEAATQGIKSMEHLIRLMSHHQSSNH-VDCSDLTDLTVSKF 59
             MAV+LM FPK  ++DQTAIQEAA+QG++SMEHLIR++S+     H VDCS++TD TVSKF
Sbjct:     1 MAVDLMRFPK--IDDQTAIQEAASQGLQSMEHLIRVLSNRPEQQHNVDCSEITDFTVSKF 58

Query:    60 KKVISLLNRTGHARFRRGPVHXXXXXXXXXXXXXXXXGNSPHXXXXXXXXXXXXXXXXXX 119
             K VISLLNRTGHARFRRGPVH                   P                   
Sbjct:    59 KTVISLLNRTGHARFRRGPVHSTSSAASQKLQSQIVKNTQPEAPIVRTTTNH-------- 110

Query:   120 XXSYVQSQPHSLTLDFTKPSLFSGNVKSTELEXXXXXXXXXXXXXXXXXAITGDGSVSNG 179
                 +   P S+TLDF+KPS+F    KS ELE                 AITGDGSVSNG
Sbjct:   111 --PQIVPPPSSVTLDFSKPSIFGTKAKSAELEFSKENFSVSLNSSFMSSAITGDGSVSNG 168

Query:   180 KQGGSSIFLA--PQAPAVSAGKPPLAAQPYKKRCQDHKDHSDDLSGKFSGSTSGNNKCHC 237
             K     IFLA  P  P  S+GKPPLA  PY+KRC +H +HS+  SGK SGS  G  KCHC
Sbjct:   169 K-----IFLASAPLQPVNSSGKPPLAGHPYRKRCLEH-EHSESFSGKVSGSAYG--KCHC 220

Query:   238 SKRR 241
              K R
Sbjct:   221 KKSR 224

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM;IC

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;ISS

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0005516 "calmodulin binding" evidence=IDA

GO:0042742 "defense response to bacterium" evidence=IEP

GO:0010200 "response to chitin" evidence=IEP;RCA

GO:0002679 "respiratory burst involved in defense response" evidence=RCA

GO:0035556 "intracellular signal transduction" evidence=RCA

TAIR|locus:2135967 WRKY7 "WRKY DNA-binding protein 7" [Arabidopsis thaliana (taxid:3702)]

 Score = 149 (57.5 bits), Expect = 4.5e-13, Sum P(2) = 4.5e-13
 Identities = 37/81 (45%), Positives = 51/81 (62%)

Query:     7 GFPK----RMMEDQTAIQEAATQGIKSMEHLIRLMSHHQS---SNHVDCSDLTDLTVSKF 59
             GFP       MED TA++EAA+ GI  +E  ++L+   Q     +  + + +TD+ V+ F
Sbjct:    19 GFPAIAAAAKMED-TALREAASAGIHGVEEFLKLIGQSQQPTEKSQTEITAVTDVAVNSF 77

Query:    60 KKVISLL--NRTGHARFRRGP 78
             KKVISLL  +RTGHARFRR P
Sbjct:    78 KKVISLLGRSRTGHARFRRAP 98

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM;IC

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;ISS

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0005516 "calmodulin binding" evidence=IDA;IPI

GO:0006457 "protein folding" evidence=RCA

GO:0006857 "oligopeptide transport" evidence=RCA

GO:0009408 "response to heat" evidence=RCA

GO:0009644 "response to high light intensity" evidence=RCA

GO:0034976 "response to endoplasmic reticulum stress" evidence=RCA

GO:0042542 "response to hydrogen peroxide" evidence=RCA

TAIR|locus:2058568 WRKY15 "WRKY DNA-binding protein 15" [Arabidopsis thaliana (taxid:3702)]

 Score = 109 (43.4 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
 Identities = 23/30 (76%), Positives = 25/30 (83%)

Query:    53 DLTVSKFKKVISLLNRT--GHARFRRGPVH 80
             D  VSKFK+VISLL+RT  GHARFRR PVH
Sbjct:    73 DAAVSKFKRVISLLDRTRTGHARFRRAPVH 102

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM;IC;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;ISS

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0005516 "calmodulin binding" evidence=IDA

GO:0010200 "response to chitin" evidence=IEP;RCA

GO:0002679 "respiratory burst involved in defense response" evidence=RCA

GO:0009693 "ethylene biosynthetic process" evidence=RCA

GO:0035556 "intracellular signal transduction" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9SV15	WRK11_ARATH	No assigned EC number	0.5737	0.8339	0.68	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	WRKY11	WRKY11; calmodulin binding / transcription factor; member of WRKY Transcription Factor; Group II-d; negative regulator of basal resistance to Pseudomonas syringae. ; Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor- responsive cis-acting element (By similarity) (325 aa)
		(Arabidopsis thaliana)
Predicted Functional Partners:
	WRKY22	WRKY22; transcription factor; member of WRKY Transcription Factor; Group II-e ; Transcription f [...] (298 aa)				•			•	•	0.635
	CAM3	CAM3 (CALMODULIN 3); calcium ion binding; encodes a calmodulin ; Calmodulin mediates the contro [...] (149 aa)					•		•		0.603
	CAM5	CAM5 (CALMODULIN 5); calcium ion binding; encodes a calmodulin that has higher affinity to kine [...] (181 aa)					•		•		0.603
	CAL	CAL (CAULIFLOWER); DNA binding / transcription factor; Floral homeotic gene encoding a MADS dom [...] (255 aa)					•				0.587
	AT4G26400	zinc finger (C3HC4-type RING finger) family protein; zinc finger (C3HC4-type RING finger) famil [...] (356 aa)							•		0.539
	AT3G56880	VQ motif-containing protein; VQ motif-containing protein; FUNCTIONS IN- molecular_function unkn [...] (245 aa)				•					0.527
	WRKY33	WRKY33; transcription factor; Member of the plant WRKY transcription factor family. Regulates t [...] (519 aa)				•			•	•	0.522
	AT3G02840	immediate-early fungal elicitor family protein; immediate-early fungal elicitor family protein; [...] (379 aa)				•			•		0.520
	MKS1	MKS1 (MAP kinase substrate 1); protein binding; Encodes a nuclear-localized member of a plant s [...] (222 aa)				•			•		0.511
	BPC2	BPC2 (BASIC PENTACYSTEINE 2); DNA binding / transcription factor; Arabidopsis GBP Basic Penta C [...] (279 aa)							•		0.507

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	265
pfam10533	47	pfam10533, Plant_zn_clust, Plant zinc cluster doma	0.001

>gnl|CDD|192617 pfam10533, Plant_zn_clust, Plant zinc cluster domain

 Score = 35.8 bits (83), Expect = 0.001
 Identities = 16/34 (47%), Positives = 21/34 (61%), Gaps = 6/34 (17%)

Query: 208 KKRCQDHKDHSDDLSGKFSGSTSGNNKCHCSKRR 241
           KKRC +  D      GK + S+SG  +CHCSK+R
Sbjct: 1   KKRCSEANDSE----GKCAASSSG--RCHCSKKR 28

This zinc binding domain was identified by Babu and colleagues and found associated with the WRKY domain pfam03106. Length = 47

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	265
PF10533	47	Plant_zn_clust: Plant zinc cluster domain; InterPr	99.51
PF05344	65	DUF746: Domain of Unknown Function (DUF746); Inter	90.91

>PF10533 Plant_zn_clust: Plant zinc cluster domain; InterPro: IPR018872 This zinc binding domain is found associated with the WRKY domain IPR003657 from INTERPRO []

Probab=99.51  E-value=6.3e-15  Score=104.26  Aligned_cols=37  Identities=41%  Similarity=0.758  Sum_probs=30.7

Q ss_pred             CCCCCCCCCCCCCCCCccccCCCCCCccccCcccccccccccc
Q 024631          208 KKRCQDHKDHSDDLSGKFSGSTSGNNKCHCSKRRYVLSNFTFG  250 (265)
Q Consensus       208 KRkCs~~g~~sed~sgKC~~~~sssgRCHCSKKRK~Rvk~~~~  250 (265)
                      ||+|+++    ++++++|++  +++||||||||||+|+||+|-
T Consensus         1 krkC~~~----~~~~~~~~~--sssgrCHCsKkRK~RvKR~ir   37 (47)
T PF10533_consen    1 KRKCHSH----NDSSGKCKC--SSSGRCHCSKKRKSRVKRTIR   37 (47)
T ss_pred             CCccccc----CcccCcccc--CCCCcccCCCcccccceeeEE
Confidence            7999998    355677642  789999999999999999984

>PF05344 DUF746: Domain of Unknown Function (DUF746); InterPro: IPR008008 This is a short conserved region found in some transposons

Probab=90.91  E-value=0.38  Score=36.68  Aligned_cols=53  Identities=26%  Similarity=0.345  Sum_probs=38.1

Q ss_pred             HHHHHHHHhcCCCCCCC----cc-hhhHHHHHHhchhhhhhhcCCCCc--cccccCCCCC
Q 024631           29 SMEHLIRLMSHHQSSNH----VD-CSDLTDLTVSKFKKVISLLNRTGH--ARFRRGPVHS   81 (265)
Q Consensus        29 S~~~ll~lLS~~~~~~~----~~-~~~~td~AVskFkkViSLL~rtGH--ARfRr~p~~s   81 (265)
                      .++.+|++||++-.-.+    .. -..++..-|.+|++-+=.||.+||  +|+|-+-.++
T Consensus         2 ~~~~fIrlLs~~~s~~~Aa~~lG~~~~~v~~wv~~fR~wll~LDPSG~~E~RVRLg~r~a   61 (65)
T PF05344_consen    2 KARAFIRLLSQQISVAQAADRLGTDPGTVRRWVRMFRQWLLQLDPSGHWEARVRLGVRPA   61 (65)
T ss_pred             cHHHHHHHhcccccHHHHHHHHCcCHHHHHHHHHHHHHHHHHcCCCCChHHHhhcCCCCC
Confidence            46789999998733211    01 123456789999999999999999  9999765433

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00