Citrus Sinensis ID: 024662

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260----
Protein Sequence
MSTALYIIKSPPVPALWFPHSLQKTPKFEFPIFRNPNISNSTSNCNSSKMLLLHRANAAPSLQVAVSEAMNLVQLSQPTWQSALLSNVVIFVLGSPILVSGLSPSGIAAAFLLGTLTWRAFGPSGFLLVATYFIIGTAATKVKMAQKEAQGVAEKRKGRRGPGSVIGSSAAGCVCAFLSIFGVGGFEFSRLWQLGFVASFCTKLSDTVSSEIGKAYGKTTYLVTTFKVVPRGTEGAVSVEGTFAGIFASILLAWVGCLTGQCAG
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHcccccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHccccccHHHHHcccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHcccccHHHHcccccccEEEEEccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHccc
Secondary Structure Prediction (SSPRO)
cccEEEEEccccccHHHccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHccHHHHHHccccHcccccccHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHccHHHHHHHHHcccccEEEEEcccccccccccEEHHHHHHHHHHHHHHHHHHHHHHHccc
Coil and Loop (DISEMBL)
MSTALYIiksppvpalwfphslqktpkfefpifrnpnisnstsncnSSKMLLLHRANAAPSLQVAVSEAMNLVQLSQPTWQSALLSNVVIFVLGspilvsglspsGIAAAFLLGTLtwrafgpsgFLLVATYFIIGTAATKVKMAQKEAQGVAekrkgrrgpgsvigssaAGCVCAFLSIFGVGGFEFSRLWQLGFVASFCTKLSDTVSSEIGKAYGKTTYLVTTFkvvprgtegavsvegTFAGIFASILLAWVGCLTGQCAG
Flexible Loop (DISEMBL)
MSTALYIiksppvpalwFPHSLQKTPKFEFPIFRNPNISNSTSNCNSSKMLLLHRANAAPSLQVAVSEAMNLVQLSQPTWQSALLSNVVIFVLGSPILVSGLSPSGIAAAFLLGTLTWRAFGPSGFLLVATYFIIGTAATKVKMAQKEAQgvaekrkgrrgpgsvigsSAAGCVCAFLSIFGVGGFEFSRLWQLGFVASFCTKLSDTVSSeigkaygkttyLVTTFKVVPRGTEGAVSVEGTFAGIFASILLAWVGCLTGQCAG
Low Complexity Region (SEG)
MSTALYIIKSPPVPALWFPHSLQKTPKFEFPIFRnpnisnstsncnssKMLLLHRANAAPSLQVAVSEAMNLVQLSQPTWQSALLSNVVIFVLGSPILVSGLSPSGIAAAFLLGTLTWRAFGPSGFLLVATYFIIGTAATKVKMAQKEAQGVAEKRKGRRGPGSVIGSSAAGCVCAFLSIFGVGGFEFSRLWQLGFVASFCTKLSDTVSSEIGKAYGKTTYLVTTFKVVPRGTEGAVSVEGTFAGIFASILLAWVGCLTGQCAG
Disordered region (IsUnstruct)
****LYIIKSPPVPALWFPHSLQKTPKFEFPIFRN**************MLLLHRANAAPSLQVAVSEAMNLVQLSQPTWQSALLSNVVIFVLGSPILVSGLSPSGIAAAFLLGTLTWRAFGPSGFLLVATYFIIGTAATKV***********************IGSSAAGCVCAFLSIFGVGGFEFSRLWQLGFVASFCTKLSDTVSSEIGKAYGKTTYLVTTFKVVPRGTEGAVSVEGTFAGIFASILLAWVGCLTGQ***
Disordered Region (DISOPRED)
***AL**IKSPPVPAL************EFPIFR***********************AAPSLQVAVSEAMNLVQLSQPTWQSALLSNVVIFVLGSPILVSGLSPSGIAAAFLLGTLTWRAFGPSGFLLVATYFIIGTAATKVKMAQ**************GPGSVIGSSAAGCVCAFLSIFGVGGFEFSRLWQLGFVASFCTKLSDTVSSEIGKAYGKTTYLVTTFKVVPRGTEGAVSVEGTFAGIFASILLAWVGCLTGQCAG
Disordered Region (DISEMBL)
MSTALYIIKSPPVPALWFPHSLQKTPKFEFPIFRNPNISNSTSNCNSSKMLLLHRANAAPSLQVAVSEAMNLVQLSQPTWQSALLSNVVIFVLGSPILVSGLSPSGIAAAFLLGTLTWRAFGPSGFLLVATYFIIGTAATKV***********************IGSSAAGCVCAFLSIFGVGGFEFSRLWQLGFVASFCTKLSDTVSSEIGKAYGKTTYLVTTFKVVPRGTEGAVSVEGTFAGIFASILLAWVGCLTGQCAG
Disordered Region (DISPRO)
*STALYIIKSPPVPALWFPHSLQKTPKFEFPIFRNPNISNSTS**NSSKMLLLHRANAAPSLQVAVSEAMNLVQLSQPTWQSALLSNVVIFVLGSPILVSGLSPSGIAAAFLLGTLTWRAFGPSGFLLVATYFIIGTAATKVKMAQKEAQGV******RRGPGSVIGSSAAGCVCAFLSIFGVGGFEFSRLWQLGFVASFCTKLSDTVSSEIGKAYGKTTYLVTTFKVVPRGTEGAVSVEGTFAGIFASILLAWVGCLTGQCAG
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiii
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiii
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiRRRRRRRRRRRRRRRRRRRRRRRRRRRiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHi
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSTALYIIKSPPVPALWFPHSLQKTPKFEFPIFRNPNISNSTSNCNSSKMLLLHRANAAPSLQVAVSEAMNLVQLSQPTWQSALLSNVVIFVLGSPILVSGLSPSGIAAAFLLGTLTWRAFGPSGFLLVATYFIIGTAATKVKMAQKEAQGVAEKRKGRRGPGSVIGSSAAGCVCAFLSIFGVGGFEFSRLWQLGFVASFCTKLSDTVSSEIGKAYGKTTYLVTTFKVVPRGTEGAVSVEGTFAGIFASILLAWVGCLTGQCAG
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	264	2.2.26 [Sep-21-2011]
P73555	258	Uncharacterized membrane	N/A	no	0.606	0.620	0.5	3e-34
Q58343	238	Uncharacterized membrane	yes	no	0.428	0.474	0.314	2e-08

>sp|P73555|Y875_SYNY3 Uncharacterized membrane protein sll0875 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=sll0875 PE=3 SV=1

 Score =  145 bits (366), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 82/164 (50%), Positives = 109/164 (66%), Gaps = 4/164 (2%)

Query: 80  WQSALLSNVVIFVLGSPILVSGLSPSGIAAAFLLGTLTWRAFGPSGFLLVATYFIIGTAA 139
           W SA++ N  +  L +      L+P G   A++LG + W A G  G+L+V  YF +G+A 
Sbjct: 18  WLSAVILNSFLLALAAIAPKKLLTPWGYGHAWVLGVIIWAALGWRGYLVVLAYFFVGSAV 77

Query: 140 TKVKMAQKEAQGVAEKRKGRRGPGSVIGSSAAGCVCAFLSIFGVGGFEFSRLW-QLGFVA 198
           T++   +KEA G+AEKR G+RGP +V GS+    +CA    FG    E  +LW  LG+VA
Sbjct: 78  TRIGQKEKEAAGIAEKRSGQRGPENVWGSALTAALCALAIAFGP---EPWQLWLALGYVA 134

Query: 199 SFCTKLSDTVSSEIGKAYGKTTYLVTTFKVVPRGTEGAVSVEGT 242
           SF TKLSDT +SE+GKAYGK T+L+TT + VPRGTEGAVSVEGT
Sbjct: 135 SFSTKLSDTTASEVGKAYGKNTFLITTLQPVPRGTEGAVSVEGT 178

Synechocystis sp. (strain PCC 6803 / Kazusa) (taxid: 1111708)

>sp|Q58343|Y933_METJA Uncharacterized membrane protein MJ0933 OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=MJ0933 PE=3 SV=1

 Score = 59.7 bits (143), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 68/124 (54%), Gaps = 11/124 (8%)

Query: 136 GTAATKVKMAQKEAQGVAEKRKGRRGPGSVIGSSAAGCVCAFLSIFGVGGFEFSRLWQL- 194
           G   ++V + +K+A+ + E  +  +   +V+ +     + A L+IFG         W L 
Sbjct: 66  GVLVSRVGLEKKKAKKMDETCRSLK---NVLANGLIPILFAILAIFGFN-------WALI 115

Query: 195 GFVASFCTKLSDTVSSEIGKAYGKTTYLVTTFKVVPRGTEGAVSVEGTFAGIFASILLAW 254
           G+++S     SDT SSE+G    +   L+TTF+VV +GT+GA+++ GT AG+  + L+  
Sbjct: 116 GYISSIAAATSDTFSSELGILSNEKPRLITTFEVVEKGTDGAITIFGTLAGVLGAFLIGL 175

Query: 255 VGCL 258
            G L
Sbjct: 176 FGYL 179

Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) (taxid: 243232)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	264
255582681	320	conserved hypothetical protein [Ricinus	0.890	0.734	0.752	3e-92
302142819	662	unnamed protein product [Vitis vinifera]	0.939	0.374	0.699	8e-90
359493882	315	PREDICTED: uncharacterized membrane prot	0.939	0.787	0.699	1e-89
224116968	273	predicted protein [Populus trichocarpa]	0.795	0.769	0.805	1e-89
356544132	270	PREDICTED: uncharacterized membrane prot	0.768	0.751	0.832	1e-87
356549616	344	PREDICTED: uncharacterized membrane prot	0.795	0.610	0.814	2e-87
18412044	333	uncharacterized transmembrane protein [A	0.761	0.603	0.761	2e-82
21592713	333	unknown [Arabidopsis thaliana]	0.761	0.603	0.761	2e-82
297842641	334	integral membrane family protein [Arabid	0.761	0.601	0.761	7e-82
42572161	342	uncharacterized transmembrane protein [A	0.761	0.587	0.728	3e-80

>gi|255582681|ref|XP_002532119.1| conserved hypothetical protein [Ricinus communis] gi|223528199|gb|EEF30259.1| conserved hypothetical protein [Ricinus communis]

 Score =  344 bits (882), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 179/238 (75%), Positives = 197/238 (82%), Gaps = 3/238 (1%)

Query: 27  KFEFPIFRNPNISNSTSNCNSSKMLLLHRANAAP---SLQVAVSEAMNLVQLSQPTWQSA 83
           +F     R   I    SN    KML   +    P   S+Q A+S AMNL+Q + PTWQSA
Sbjct: 18  QFNKSTIRLKKILTLNSNPGLPKMLPQEKQTQTPNAVSMQGALSGAMNLIQSAPPTWQSA 77

Query: 84  LLSNVVIFVLGSPILVSGLSPSGIAAAFLLGTLTWRAFGPSGFLLVATYFIIGTAATKVK 143
           L++NV+IF+LGSPIL+SGLS SGI AAFLLGTLTWRAFGPSGFLLVA YF+IGTAATKVK
Sbjct: 78  LVNNVLIFILGSPILLSGLSLSGICAAFLLGTLTWRAFGPSGFLLVACYFVIGTAATKVK 137

Query: 144 MAQKEAQGVAEKRKGRRGPGSVIGSSAAGCVCAFLSIFGVGGFEFSRLWQLGFVASFCTK 203
           MAQKEAQGVAEKRKGRRGPGSVIGSSAAGCVCAFLSI+GVGG  FSRLW+LGFVASFCTK
Sbjct: 138 MAQKEAQGVAEKRKGRRGPGSVIGSSAAGCVCAFLSIYGVGGEAFSRLWELGFVASFCTK 197

Query: 204 LSDTVSSEIGKAYGKTTYLVTTFKVVPRGTEGAVSVEGTFAGIFASILLAWVGCLTGQ 261
           LSDTVSSEIGKAYGK TYLVTTFK+VPRGTEGAVSVEGT AG+ ASILLA +GC  G+
Sbjct: 198 LSDTVSSEIGKAYGKITYLVTTFKIVPRGTEGAVSVEGTLAGLLASILLASIGCFLGE 255

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|302142819|emb|CBI20114.3| unnamed protein product [Vitis vinifera]

 Score =  335 bits (860), Expect = 8e-90,   Method: Compositional matrix adjust.
 Identities = 184/263 (69%), Positives = 207/263 (78%), Gaps = 15/263 (5%)

Query: 1   MSTALYIIKSPPVPALWFPHSLQKTPKFEFPIFRNPNISNSTSNCNSSKMLLLHRA--NA 58
           +ST L+  + PP+P   F H+   T +  +P   +P            KM L  +A  N 
Sbjct: 350 LSTTLF--RFPPIPLQQFHHT-SSTKRLLYPRI-SPQFP---------KMPLTAKALPNP 396

Query: 59  APSLQVAVSEAMNLVQLSQPTWQSALLSNVVIFVLGSPILVSGLSPSGIAAAFLLGTLTW 118
            P  + AVSEA+ L+Q S  TW+SALL+N +IF+ G+PILVSGLS SGIAAAFLLGTLTW
Sbjct: 397 VPGFRGAVSEAIALIQSSPATWKSALLNNFLIFIAGAPILVSGLSLSGIAAAFLLGTLTW 456

Query: 119 RAFGPSGFLLVATYFIIGTAATKVKMAQKEAQGVAEKRKGRRGPGSVIGSSAAGCVCAFL 178
           RAFG  GFLLVATYF+IGTAATKVKMAQKEAQGVAEKRKGRRGPGSVIGSSAAGCVCAFL
Sbjct: 457 RAFGSPGFLLVATYFVIGTAATKVKMAQKEAQGVAEKRKGRRGPGSVIGSSAAGCVCAFL 516

Query: 179 SIFGVGGFEFSRLWQLGFVASFCTKLSDTVSSEIGKAYGKTTYLVTTFKVVPRGTEGAVS 238
           SI+GVGG  F +LWQLGFVASFCTKLSDTVSSEIGKAYGKTTYLVTT K+VPRGTEGAVS
Sbjct: 517 SIYGVGGEAFLQLWQLGFVASFCTKLSDTVSSEIGKAYGKTTYLVTTLKIVPRGTEGAVS 576

Query: 239 VEGTFAGIFASILLAWVGCLTGQ 261
            EGT AG+ ASILLA+VGCL GQ
Sbjct: 577 AEGTSAGLLASILLAFVGCLMGQ 599

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359493882|ref|XP_002283657.2| PREDICTED: uncharacterized membrane protein sll0875-like [Vitis vinifera]

 Score =  335 bits (859), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 184/263 (69%), Positives = 207/263 (78%), Gaps = 15/263 (5%)

Query: 1   MSTALYIIKSPPVPALWFPHSLQKTPKFEFPIFRNPNISNSTSNCNSSKMLLLHRA--NA 58
           +ST L+  + PP+P   F H+   T +  +P   +P            KM L  +A  N 
Sbjct: 3   LSTTLF--RFPPIPLQQFHHT-SSTKRLLYPRI-SPQFP---------KMPLTAKALPNP 49

Query: 59  APSLQVAVSEAMNLVQLSQPTWQSALLSNVVIFVLGSPILVSGLSPSGIAAAFLLGTLTW 118
            P  + AVSEA+ L+Q S  TW+SALL+N +IF+ G+PILVSGLS SGIAAAFLLGTLTW
Sbjct: 50  VPGFRGAVSEAIALIQSSPATWKSALLNNFLIFIAGAPILVSGLSLSGIAAAFLLGTLTW 109

Query: 119 RAFGPSGFLLVATYFIIGTAATKVKMAQKEAQGVAEKRKGRRGPGSVIGSSAAGCVCAFL 178
           RAFG  GFLLVATYF+IGTAATKVKMAQKEAQGVAEKRKGRRGPGSVIGSSAAGCVCAFL
Sbjct: 110 RAFGSPGFLLVATYFVIGTAATKVKMAQKEAQGVAEKRKGRRGPGSVIGSSAAGCVCAFL 169

Query: 179 SIFGVGGFEFSRLWQLGFVASFCTKLSDTVSSEIGKAYGKTTYLVTTFKVVPRGTEGAVS 238
           SI+GVGG  F +LWQLGFVASFCTKLSDTVSSEIGKAYGKTTYLVTT K+VPRGTEGAVS
Sbjct: 170 SIYGVGGEAFLQLWQLGFVASFCTKLSDTVSSEIGKAYGKTTYLVTTLKIVPRGTEGAVS 229

Query: 239 VEGTFAGIFASILLAWVGCLTGQ 261
            EGT AG+ ASILLA+VGCL GQ
Sbjct: 230 AEGTSAGLLASILLAFVGCLMGQ 252

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224116968|ref|XP_002317441.1| predicted protein [Populus trichocarpa] gi|222860506|gb|EEE98053.1| predicted protein [Populus trichocarpa]

 Score =  335 bits (858), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 170/211 (80%), Positives = 188/211 (89%), Gaps = 1/211 (0%)

Query: 51  LLLHRANAAPSLQVAVSEAMNLVQLSQPTWQSALLSNVVIFVLGSPILVSGLSPSGIAAA 110
           +L HR +A  S+Q  +S+AMNL+Q + PTW+SAL SN++IFV+GSPILVSGLS SGI AA
Sbjct: 1   MLPHRPHAV-SMQGVLSDAMNLIQSAHPTWKSALFSNLLIFVVGSPILVSGLSLSGIFAA 59

Query: 111 FLLGTLTWRAFGPSGFLLVATYFIIGTAATKVKMAQKEAQGVAEKRKGRRGPGSVIGSSA 170
           +LLGTLTWRAFG SGFLLVA+YF+IGTA TKVKMAQKEAQGVAEKRKGRRGPGSVIGSSA
Sbjct: 60  YLLGTLTWRAFGASGFLLVASYFVIGTAVTKVKMAQKEAQGVAEKRKGRRGPGSVIGSSA 119

Query: 171 AGCVCAFLSIFGVGGFEFSRLWQLGFVASFCTKLSDTVSSEIGKAYGKTTYLVTTFKVVP 230
           AGCVCAFLSIFG GG  F  LWQLGFVASFCTKLSDTVSSEIGKAYGKTTYLVTTFKVVP
Sbjct: 120 AGCVCAFLSIFGTGGRAFIALWQLGFVASFCTKLSDTVSSEIGKAYGKTTYLVTTFKVVP 179

Query: 231 RGTEGAVSVEGTFAGIFASILLAWVGCLTGQ 261
           RGTEGAVS EGT AG+ ASILLA +GC+ G+
Sbjct: 180 RGTEGAVSAEGTLAGLLASILLASIGCILGE 210

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356544132|ref|XP_003540509.1| PREDICTED: uncharacterized membrane protein sll0875-like [Glycine max]

 Score =  328 bits (842), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 169/203 (83%), Positives = 181/203 (89%)

Query: 59  APSLQVAVSEAMNLVQLSQPTWQSALLSNVVIFVLGSPILVSGLSPSGIAAAFLLGTLTW 118
           A  +Q AV  A+ LVQ S  TWQSALLSN +IF+LGSPILVSGLS SGI AAFLLGTLTW
Sbjct: 3   ATRIQDAVGGALALVQSSPATWQSALLSNALIFLLGSPILVSGLSLSGIGAAFLLGTLTW 62

Query: 119 RAFGPSGFLLVATYFIIGTAATKVKMAQKEAQGVAEKRKGRRGPGSVIGSSAAGCVCAFL 178
           RAFGPSGF LVATYF+IGTAATKVKMAQK AQGVAEKR+GRRGPGSVIGSSAAGC+CAFL
Sbjct: 63  RAFGPSGFFLVATYFVIGTAATKVKMAQKVAQGVAEKRRGRRGPGSVIGSSAAGCICAFL 122

Query: 179 SIFGVGGFEFSRLWQLGFVASFCTKLSDTVSSEIGKAYGKTTYLVTTFKVVPRGTEGAVS 238
           +IFGVGG  FSRLW+LGFVASFCTKLSDTVSSEIGKAYGKTTYLVTTFK+VPRGTEGAVS
Sbjct: 123 TIFGVGGEAFSRLWRLGFVASFCTKLSDTVSSEIGKAYGKTTYLVTTFKIVPRGTEGAVS 182

Query: 239 VEGTFAGIFASILLAWVGCLTGQ 261
           VEGT AGI ASI+LA V  L G+
Sbjct: 183 VEGTLAGILASIVLALVSFLMGE 205

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356549616|ref|XP_003543188.1| PREDICTED: uncharacterized membrane protein sll0875-like [Glycine max]

 Score =  327 bits (839), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 171/210 (81%), Positives = 183/210 (87%)

Query: 52  LLHRANAAPSLQVAVSEAMNLVQLSQPTWQSALLSNVVIFVLGSPILVSGLSPSGIAAAF 111
           L  R   A  +Q AV  A+ LVQ S  TWQSALLSN +IF LGSPILVSGLS SGI AAF
Sbjct: 70  LFPRTMHASRIQDAVGGALALVQSSPATWQSALLSNALIFFLGSPILVSGLSLSGIGAAF 129

Query: 112 LLGTLTWRAFGPSGFLLVATYFIIGTAATKVKMAQKEAQGVAEKRKGRRGPGSVIGSSAA 171
           LLGTLTWRAFGPSGF LVATYF+IGTAATKVKMAQK AQGVAEK++GRRGPGSVIGSSAA
Sbjct: 130 LLGTLTWRAFGPSGFFLVATYFVIGTAATKVKMAQKVAQGVAEKKRGRRGPGSVIGSSAA 189

Query: 172 GCVCAFLSIFGVGGFEFSRLWQLGFVASFCTKLSDTVSSEIGKAYGKTTYLVTTFKVVPR 231
           GC+CAFL+IFGVGG  FSRLW+LGFVASFCTKLSDTVSSEIGKAYGKTTYLVTTFKVVPR
Sbjct: 190 GCICAFLTIFGVGGEAFSRLWRLGFVASFCTKLSDTVSSEIGKAYGKTTYLVTTFKVVPR 249

Query: 232 GTEGAVSVEGTFAGIFASILLAWVGCLTGQ 261
           GTEGAVSVEGT AGI ASI+LA+V  L G+
Sbjct: 250 GTEGAVSVEGTLAGILASIVLAFVSFLIGE 279

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18412044|ref|NP_565184.1| uncharacterized transmembrane protein [Arabidopsis thaliana] gi|4836871|gb|AAD30574.1|AC007260_5 Unknown protein [Arabidopsis thaliana] gi|14334658|gb|AAK59507.1| unknown protein [Arabidopsis thaliana] gi|17104591|gb|AAL34184.1| unknown protein [Arabidopsis thaliana] gi|332198007|gb|AEE36128.1| uncharacterized transmembrane protein [Arabidopsis thaliana]

 Score =  311 bits (797), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 153/201 (76%), Positives = 179/201 (89%)

Query: 61  SLQVAVSEAMNLVQLSQPTWQSALLSNVVIFVLGSPILVSGLSPSGIAAAFLLGTLTWRA 120
           S++  ++EAM L+Q + PTW+SA+ +N++IFVLGSP+LV+GLS SGIAAAFLLGTLTWRA
Sbjct: 67  SMEGVMTEAMKLIQSASPTWKSAVANNLLIFVLGSPLLVTGLSASGIAAAFLLGTLTWRA 126

Query: 121 FGPSGFLLVATYFIIGTAATKVKMAQKEAQGVAEKRKGRRGPGSVIGSSAAGCVCAFLSI 180
           +G +GFLLVA YF+IGTAATKVKM QKEAQGVAEKRKGRRGP SVIGSSAAGCVCAFLSI
Sbjct: 127 YGSAGFLLVAAYFVIGTAATKVKMTQKEAQGVAEKRKGRRGPRSVIGSSAAGCVCAFLSI 186

Query: 181 FGVGGFEFSRLWQLGFVASFCTKLSDTVSSEIGKAYGKTTYLVTTFKVVPRGTEGAVSVE 240
           + VGG  FS+L++LGFV+SFCTK+SDTVSSEIGKAYGKTTYL TTFK+VPRGTEGA+S+E
Sbjct: 187 YQVGGAAFSQLFRLGFVSSFCTKVSDTVSSEIGKAYGKTTYLATTFKIVPRGTEGAMSLE 246

Query: 241 GTFAGIFASILLAWVGCLTGQ 261
           GT AG+ AS  LA VGC  GQ
Sbjct: 247 GTLAGLLASFFLASVGCFLGQ 267

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|21592713|gb|AAM64662.1| unknown [Arabidopsis thaliana]

 Score =  311 bits (796), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 153/201 (76%), Positives = 179/201 (89%)

Query: 61  SLQVAVSEAMNLVQLSQPTWQSALLSNVVIFVLGSPILVSGLSPSGIAAAFLLGTLTWRA 120
           S++  ++EAM L+Q + PTW+SA+ +N++IFVLGSP+LV+GLS SGIAAAFLLGTLTWRA
Sbjct: 67  SMEGVMTEAMKLIQSASPTWKSAVANNLLIFVLGSPLLVTGLSASGIAAAFLLGTLTWRA 126

Query: 121 FGPSGFLLVATYFIIGTAATKVKMAQKEAQGVAEKRKGRRGPGSVIGSSAAGCVCAFLSI 180
           +G +GFLLVA YF+IGTAATKVKM QKEAQGVAEKRKGRRGP SVIGSSAAGCVCAFLSI
Sbjct: 127 YGSAGFLLVAAYFVIGTAATKVKMTQKEAQGVAEKRKGRRGPRSVIGSSAAGCVCAFLSI 186

Query: 181 FGVGGFEFSRLWQLGFVASFCTKLSDTVSSEIGKAYGKTTYLVTTFKVVPRGTEGAVSVE 240
           + VGG  FS+L++LGFV+SFCTK+SDTVSSEIGKAYGKTTYL TTFK+VPRGTEGA+S+E
Sbjct: 187 YQVGGAAFSQLFRLGFVSSFCTKVSDTVSSEIGKAYGKTTYLATTFKIVPRGTEGAMSLE 246

Query: 241 GTFAGIFASILLAWVGCLTGQ 261
           GT AG+ AS  LA VGC  GQ
Sbjct: 247 GTLAGLLASFFLASVGCFLGQ 267

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297842641|ref|XP_002889202.1| integral membrane family protein [Arabidopsis lyrata subsp. lyrata] gi|297335043|gb|EFH65461.1| integral membrane family protein [Arabidopsis lyrata subsp. lyrata]

 Score =  309 bits (792), Expect = 7e-82,   Method: Compositional matrix adjust.
 Identities = 153/201 (76%), Positives = 179/201 (89%)

Query: 61  SLQVAVSEAMNLVQLSQPTWQSALLSNVVIFVLGSPILVSGLSPSGIAAAFLLGTLTWRA 120
           S++  ++EAM L+Q + PTW+SA+ +N++IFVLGSP+LV+GLS SGIAAAFLLGTLTWRA
Sbjct: 68  SMEGVMTEAMKLIQSASPTWKSAVANNLLIFVLGSPLLVTGLSASGIAAAFLLGTLTWRA 127

Query: 121 FGPSGFLLVATYFIIGTAATKVKMAQKEAQGVAEKRKGRRGPGSVIGSSAAGCVCAFLSI 180
           +G +GFLLVA YF+IGTAATKVKM QKEAQGVAEKRKGRRGP SVIGSSAAGCVCAFLSI
Sbjct: 128 YGSAGFLLVAAYFVIGTAATKVKMTQKEAQGVAEKRKGRRGPRSVIGSSAAGCVCAFLSI 187

Query: 181 FGVGGFEFSRLWQLGFVASFCTKLSDTVSSEIGKAYGKTTYLVTTFKVVPRGTEGAVSVE 240
           + VGG  FS+L++LGFV+SFCTK+SDTVSSEIGKAYGKTTYL TTFK+VPRGTEGA+S+E
Sbjct: 188 YQVGGAAFSQLFRLGFVSSFCTKVSDTVSSEIGKAYGKTTYLATTFKIVPRGTEGAMSIE 247

Query: 241 GTFAGIFASILLAWVGCLTGQ 261
           GT AG+ AS  LA VGC  GQ
Sbjct: 248 GTLAGLLASFFLASVGCFLGQ 268

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|42572161|ref|NP_974171.1| uncharacterized transmembrane protein [Arabidopsis thaliana] gi|332198008|gb|AEE36129.1| uncharacterized transmembrane protein [Arabidopsis thaliana]

 Score =  304 bits (778), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 153/210 (72%), Positives = 179/210 (85%), Gaps = 9/210 (4%)

Query: 61  SLQVAVSEAMNLVQLSQPTWQSALLSNVVIFVLGSPILVSGLSPSGIAAAFLLGTLTWRA 120
           S++  ++EAM L+Q + PTW+SA+ +N++IFVLGSP+LV+GLS SGIAAAFLLGTLTWRA
Sbjct: 67  SMEGVMTEAMKLIQSASPTWKSAVANNLLIFVLGSPLLVTGLSASGIAAAFLLGTLTWRA 126

Query: 121 FGPSGFLLVATYFII---------GTAATKVKMAQKEAQGVAEKRKGRRGPGSVIGSSAA 171
           +G +GFLLVA YF+I         GTAATKVKM QKEAQGVAEKRKGRRGP SVIGSSAA
Sbjct: 127 YGSAGFLLVAAYFVIVSAFVINLNGTAATKVKMTQKEAQGVAEKRKGRRGPRSVIGSSAA 186

Query: 172 GCVCAFLSIFGVGGFEFSRLWQLGFVASFCTKLSDTVSSEIGKAYGKTTYLVTTFKVVPR 231
           GCVCAFLSI+ VGG  FS+L++LGFV+SFCTK+SDTVSSEIGKAYGKTTYL TTFK+VPR
Sbjct: 187 GCVCAFLSIYQVGGAAFSQLFRLGFVSSFCTKVSDTVSSEIGKAYGKTTYLATTFKIVPR 246

Query: 232 GTEGAVSVEGTFAGIFASILLAWVGCLTGQ 261
           GTEGA+S+EGT AG+ AS  LA VGC  GQ
Sbjct: 247 GTEGAMSLEGTLAGLLASFFLASVGCFLGQ 276

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	264
TAIR|locus:2202955	342	AT1G78620 [Arabidopsis thalian	0.772	0.596	0.727	3.4e-77
UNIPROTKB|G4NEB5	376	MGG_00802 "Uncharacterized pro	0.272	0.191	0.36	1.2e-07
UNIPROTKB|A7E3R1	336	TMEM19 "Uncharacterized protei	0.685	0.538	0.275	7.4e-06
UNIPROTKB|Q96HH6	336	TMEM19 "Transmembrane protein	0.696	0.547	0.268	8.3e-05
TAIR|locus:2147705	288	AT5G19930 [Arabidopsis thalian	0.609	0.559	0.285	0.0001
ZFIN|ZDB-GENE-040625-78	322	tmem19 "transmembrane protein	0.696	0.571	0.26	0.00017
UNIPROTKB|F1PGI2	297	TMEM19 "Uncharacterized protei	0.696	0.619	0.273	0.00025
DICTYBASE|DDB_G0287439	295	DDB_G0287439 "Transmembrane pr	0.545	0.488	0.285	0.00032
UNIPROTKB|F1SH34	336	TMEM19 "Uncharacterized protei	0.628	0.494	0.284	0.00041
ASPGD|ASPL0000068016	365	AN7615 [Emericella nidulans (t	0.227	0.164	0.370	0.00074

TAIR|locus:2202955 AT1G78620 [Arabidopsis thaliana (taxid:3702)]

 Score = 777 (278.6 bits), Expect = 3.4e-77, P = 3.4e-77
 Identities = 155/213 (72%), Positives = 181/213 (84%)

Query:    58 AAPSLQVAVSEAMNLVQLSQPTWQSALLSNVVIFVLGSPILVSGLSPSGIAAAFLLGTLT 117
             AA S++  ++EAM L+Q + PTW+SA+ +N++IFVLGSP+LV+GLS SGIAAAFLLGTLT
Sbjct:    64 AAASMEGVMTEAMKLIQSASPTWKSAVANNLLIFVLGSPLLVTGLSASGIAAAFLLGTLT 123

Query:   118 WRAFGPSGFLLVATYFII---------GTAATKVKMAQKEAQGVAEKRKGRRGPGSVIGS 168
             WRA+G +GFLLVA YF+I         GTAATKVKM QKEAQGVAEKRKGRRGP SVIGS
Sbjct:   124 WRAYGSAGFLLVAAYFVIVSAFVINLNGTAATKVKMTQKEAQGVAEKRKGRRGPRSVIGS 183

Query:   169 SAAGCVCAFLSIFGVGGFEFSRLWQLGFVASFCTKLSDTVSSEIGKAYGKTTYLVTTFKV 228
             SAAGCVCAFLSI+ VGG  FS+L++LGFV+SFCTK+SDTVSSEIGKAYGKTTYL TTFK+
Sbjct:   184 SAAGCVCAFLSIYQVGGAAFSQLFRLGFVSSFCTKVSDTVSSEIGKAYGKTTYLATTFKI 243

Query:   229 VPRGTEGAVSVEGTFAGIFASILLAWVGCLTGQ 261
             VPRGTEGA+S+EGT AG+ AS  LA VGC  GQ
Sbjct:   244 VPRGTEGAMSLEGTLAGLLASFFLASVGCFLGQ 276

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0016021 "integral to membrane" evidence=IEA

GO:0009706 "chloroplast inner membrane" evidence=IDA

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0048767 "root hair elongation" evidence=RCA

GO:0009536 "plastid" evidence=IDA

UNIPROTKB|G4NEB5 MGG_00802 "Uncharacterized protein" [Magnaporthe oryzae 70-15 (taxid:242507)]

 Score = 108 (43.1 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
 Identities = 27/75 (36%), Positives = 40/75 (53%)

Query:   191 LWQLGFVASFCTKLSDTVSSEIGKAYGKTTYLVT--TFKVVPRGTEGAVSVEGTFAGIFA 248
             L  +G +A++    +DT SSE+G     T  L+T  T + VPRGT G V+  G  AG+  
Sbjct:   135 LLPIGIIANYAAMAADTFSSELGILSSATPRLITSPTLRKVPRGTNGGVTALGLGAGLLG 194

Query:   249 SILLAWVGCL-TGQC 262
             S+++     L T  C
Sbjct:   195 SMVVVVASVLFTPLC 209

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|A7E3R1 TMEM19 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 128 (50.1 bits), Expect = 7.4e-06, P = 7.4e-06
 Identities = 54/196 (27%), Positives = 83/196 (42%)

Query:    77 QPT--WQSALLSNVVIFVLGSPILVSGLSPSGIAAAFLLG-TLTWRAFGPSGFLLVATYF 133
             QP   W+      V + ++ +      L  SG     ++G  LT   F  S F  + T+F
Sbjct:    47 QPVSPWRWLFSVVVTVLIVSNGFKKKSLDHSGALGGLVVGFILTIANF--SFFTSLVTFF 104

Query:   134 IIGTAATKVKMAQKEAQGVAEKRKGRRGPGSVIGSSAAGCVCAFLSIFGVG-G---FEFS 189
             +  +  TK K   K+      K  G+R    V  + A     A L +   G G    +FS
Sbjct:   105 LSSSKLTKWKGEAKKHLDSEYKEGGQRNWIQVFCNGAVPTELALLYMIESGPGEIPIDFS 164

Query:   190 RL----WQ-LGFVASFCTKLSDTVSSEIGKAYGKTT-YLVTTFKVVPRGTEGAVSVEGTF 243
             R     W  L  +A+  +   DT +SE+G    K+T  L+TT++ VP GT G V+V G  
Sbjct:   165 RQHTASWMCLSLLAALASSAGDTWASEVGPVLSKSTPRLITTWEKVPVGTNGGVTVVGLA 224

Query:   244 AGIFASILLAWVGCLT 259
             + +     +     LT
Sbjct:   225 SSLLGGTFVGITYFLT 240

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|Q96HH6 TMEM19 "Transmembrane protein 19" [Homo sapiens (taxid:9606)]

 Score = 119 (46.9 bits), Expect = 8.3e-05, P = 8.3e-05
 Identities = 54/201 (26%), Positives = 85/201 (42%)

Query:    71 NLVQLSQPTWQSALLSNVV-IFVLGSPILVSGLSPSGIAAAFLLG-TLTWRAFGPSGFLL 128
             NL  +S   W   L S VV + ++ + +    L  SG     ++G  LT   F  S F  
Sbjct:    45 NLRPISPWRW---LFSVVVPVLIVSNGLKKKSLDHSGALGGLVVGFILTIANF--SFFTS 99

Query:   129 VATYFIIGTAATKVKMAQKEAQGVAEKRKGRRGPGSVIGSSAAGCVCAFLSIF--GVGGF 186
             +  +F+  +  TK K   K+      K  G+R    V  + A     A L +   G G  
Sbjct:   100 LLMFFLSSSKLTKWKGEVKKRLDSEYKEGGQRNWVQVFCNGAVPTELALLYMIENGPGEI 159

Query:   187 ------EFSRLWQ-LGFVASFCTKLSDTVSSEIGKAYGKTT-YLVTTFKVVPRGTEGAVS 238
                   ++S  W  L  +A+      DT +SE+G    K++  L+TT++ VP GT G V+
Sbjct:   160 PVDFSKQYSASWMCLSLLAALACSAGDTWASEVGPVLSKSSPRLITTWEKVPVGTNGGVT 219

Query:   239 VEGTFAGIFASILLAWVGCLT 259
             V G  + +     +     LT
Sbjct:   220 VVGLVSSLLGGTFVGIAYFLT 240

GO:0016021 "integral to membrane" evidence=IEA

TAIR|locus:2147705 AT5G19930 [Arabidopsis thaliana (taxid:3702)]

 Score = 117 (46.2 bits), Expect = 0.00010, P = 0.00010
 Identities = 50/175 (28%), Positives = 78/175 (44%)

Query:   102 LSPSGIAAAFLLGTLTWRAFGPSGFLLVATYFIIGTAATKVKMAQKEAQGVAEKRKGRRG 161
             L  SG  A FL+ T+ + A    G LL+  +F+  +  TKV   +K    V  K  G+R 
Sbjct:    29 LDLSGGIAGFLVMTIHFTAGFRYGALLLV-FFLTSSKLTKVGEDKKRRVDVEFKEGGQRN 87

Query:   162 PGSVIGSSAAGCVCAFLSIFGVGGFEF---SRLWQL------GFVASFCTKLSDTVSSEI 212
                V+ +S    V   ++    G  +    S+  ++      G +  +     DT SSE+
Sbjct:    88 WVQVLCNSGIASVLVVIACTLTGWKDKCLDSKQSEIVTALIGGIIGHYACCNGDTWSSEL 147

Query:   213 GKAYGKTTYLVTTFKVVPRGTEGAVSVEGTFAGIFA--SILLAWV--GCLTGQCA 263
             G        L+TTFK V +GT G V+  G  A + A  ++ L ++  G  T  CA
Sbjct:   148 GVLSDAQPRLITTFKPVKKGTNGGVTKAGLLAALAAGTTVGLTFLIFGLFTASCA 202

GO:0016021 "integral to membrane" evidence=IEA

ZFIN|ZDB-GENE-040625-78 tmem19 "transmembrane protein 19" [Danio rerio (taxid:7955)]

 Score = 116 (45.9 bits), Expect = 0.00017, P = 0.00017
 Identities = 52/200 (26%), Positives = 79/200 (39%)

Query:    62 LQVAVSEAMNLVQLSQPTWQSALLSNVVIFVLGSPILVSGLSPSGIAAAFLLGTLTWRAF 121
             L +  S     +Q   P W+      + +F+         L   G   A L+G +   A 
Sbjct:    21 LSLTASTYYGTLQPVSP-WRWLFSVLIPLFITFRASKRKSLDHGGAIGAMLVGFVLTMA- 78

Query:   122 GPSGFLLVATYFIIGTAATKVKMAQKEAQGVAEKRKGRRGPGSVIGSSAAGCVCAFLSIF 181
               S F ++ T+FI  T  T+ K   K+      K  G+R    V  +       A L + 
Sbjct:    79 NMSFFAVLLTFFITSTKLTRWKGEIKKKIDPEYKEGGQRNWLQVFCNGGVPTELALLYMI 138

Query:   182 GVGGFE--------FSRLWQ-LGFVASFCTKLSDTVSSEIGKAYGKTT-YLVTTFKVVPR 231
               G  E        +S  W  L  + +      DT +SE+G    K+   L+TT++ VP 
Sbjct:   139 EAGPGEMAIDFAKQYSASWMCLSLLGALACSTGDTWASEVGPVLSKSKPKLITTWRDVPT 198

Query:   232 GTEGAVSVEGTFAGIFASIL 251
             GT G V    T  G+ AS+L
Sbjct:   199 GTNGGV----TSVGLLASVL 214

GO:0016021 "integral to membrane" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0003674 "molecular_function" evidence=ND

UNIPROTKB|F1PGI2 TMEM19 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 114 (45.2 bits), Expect = 0.00025, P = 0.00025
 Identities = 55/201 (27%), Positives = 84/201 (41%)

Query:    71 NLVQLSQPTWQSALLSNVV-IFVLGSPILVSGLSPSGIAAAFLLG-TLTWRAFGPSGFLL 128
             NL  +S   W   L S VV + ++ +      L  SG     ++G  LT   F  S F  
Sbjct:     6 NLQPISPWRW---LFSVVVPVLIVSNGFKKKSLDHSGALGGLVVGFILTIANF--SFFTS 60

Query:   129 VATYFIIGTAATKVKMAQKEAQGVAEKRKGRRGPGSVIGSSAAGCVCAFLSIF--GVGGF 186
             +  +F+  +  TK K   K+      K  G+R    V  + A     A L +   G G  
Sbjct:    61 LLMFFLSSSKLTKWKGEIKKRLDSEYKEGGQRNWVQVFCNGAVPTELALLYMIENGPGEI 120

Query:   187 --EFSRL----WQ-LGFVASFCTKLSDTVSSEIGKAYGKTT-YLVTTFKVVPRGTEGAVS 238
               +FS+     W  L  +A+      DT +SE+G    K+   L+TT++ VP GT G V+
Sbjct:   121 PIDFSKQYTASWMCLSLLAALACSAGDTWASEVGPVLSKSPPRLITTWEKVPVGTNGGVT 180

Query:   239 VEGTFAGIFASILLAWVGCLT 259
             V G  + +     +     LT
Sbjct:   181 VVGLVSSLLGGTFVGITYFLT 201

GO:0016021 "integral to membrane" evidence=IEA

DICTYBASE|DDB_G0287439 DDB_G0287439 "Transmembrane protein 19" [Dictyostelium discoideum (taxid:44689)]

 Score = 113 (44.8 bits), Expect = 0.00032, P = 0.00032
 Identities = 44/154 (28%), Positives = 66/154 (42%)

Query:   102 LSPSGIAAAFLLGTLTWRAFGPSGFLLVATYFIIGTAATKVKMAQKEAQGVAEKRKGRRG 161
             L+ SG   A+L G  T   FG +   L+ +++   +  TK K + K+         G+R 
Sbjct:    30 LNQSGTITAWLTGVSTC-IFGSTFATLLLSFYFSSSYLTKYKSSIKKTIEDGHTAGGQRN 88

Query:   162 PGSVIGSSAAGCVCA----FLS-----IFGVGGFEFSRLWQLGFVASFCTKLSDTVSSEI 212
                V+ +S  G + A    F S     +       FS      F+  +     DT +SE+
Sbjct:    89 YIQVLSNSLPGTIFAAIFYFFSKSSNTLINFNNDFFSSFIICCFIGHYSCCNGDTWASEL 148

Query:   213 GKAYGKTTYLVTTFKVVPRGTEGAVSVEGTFAGI 246
             G        L+TTFK VP+GT G +S  G  A I
Sbjct:   149 GILSKGEPILITTFKKVPKGTNGGLSPLGIGASI 182

GO:0016021 "integral to membrane" evidence=IEA

GO:0044351 "macropinocytosis" evidence=RCA

UNIPROTKB|F1SH34 TMEM19 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 113 (44.8 bits), Expect = 0.00041, P = 0.00041
 Identities = 52/183 (28%), Positives = 80/183 (43%)

Query:    71 NLVQLSQPTWQSALLSNVV-IFVLGSPILVSGLSPSGIAAAFLLG-TLTWRAFGPSGFLL 128
             NL  +S   W   L S VV + ++ +      L  SG     ++G  LT   F  S F  
Sbjct:    45 NLQPISPWRW---LFSVVVPVLIISNGFKKKSLDHSGAIGGLVVGFILTIANF--SFFTS 99

Query:   129 VATYFIIGTAATKVKMAQKEAQGVAEKRKGRRGPGSVIGSSAAGCVCAFLSIF--GVGGF 186
             +  +F+  +  TK K   K+      K  G+R    V  + A     A L +   G G  
Sbjct:   100 LLMFFLSSSKLTKWKGEAKKRLDSEYKEGGQRNWIQVFCNGAVPTELALLYMIENGPGEI 159

Query:   187 --EFSRL----WQ-LGFVASFCTKLSDTVSSEIGKAYGKTT-YLVTTFKVVPRGTEGAVS 238
               +FS+     W  L  +A+  +   DT +SE+G    K+   L+TT++ VP GT G V+
Sbjct:   160 PIDFSKQHTASWMCLSLLAALASSAGDTWASEVGTVLSKSPPRLITTWEKVPVGTNGGVT 219

Query:   239 VEG 241
             + G
Sbjct:   220 MVG 222

GO:0016021 "integral to membrane" evidence=IEA

ASPGD|ASPL0000068016 AN7615 [Emericella nidulans (taxid:162425)]

 Score = 98 (39.6 bits), Expect = 0.00074, Sum P(2) = 0.00074
 Identities = 23/62 (37%), Positives = 34/62 (54%)

Query:   194 LGFVASFCTKLSDTVSSEIGKAYGKTTYLVT--TFKVVPRGTEGAVSVEGTFAGIFASIL 251
             +G VA++    +DT SSE+G        L+T  T +VVP GT G V+  G  AG+  +  
Sbjct:   133 VGIVANYAAVAADTFSSELGILSKSKPRLITSPTLRVVPPGTNGGVTGTGILAGLLGAFT 192

Query:   252 LA 253
             +A
Sbjct:   193 IA 194

GO:0008150 "biological_process" evidence=ND

GO:0016021 "integral to membrane" evidence=IEA

GO:0003674 "molecular_function" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	estExt_Genewise1_v1.C_LG_XI3428	hypothetical protein (274 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
	gw1.IX.1599.1	hypothetical protein (424 aa)	•								0.460

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	264
pfam01940	224	pfam01940, DUF92, Integral membrane protein DUF92	3e-59
COG1836	247	COG1836, COG1836, Predicted membrane protein [Func	6e-44
TIGR00297	237	TIGR00297, TIGR00297, TIGR00297 family protein	2e-43

>gnl|CDD|216799 pfam01940, DUF92, Integral membrane protein DUF92

 Score =  187 bits (477), Expect = 3e-59
 Identities = 76/179 (42%), Positives = 103/179 (57%), Gaps = 5/179 (2%)

Query: 83  ALLSNVVIFVLGSPILVSGLSPSGIAAAFLLGTLTWRAFGPSGFLLVATYFIIGTAATKV 142
           A+L N+++  L     +  L+ SG  AA LLGTL W   G   F L+  +F++G+ ATK+
Sbjct: 1   AVLLNLLLGALA--YRLKSLTLSGALAAVLLGTLIWGLGGWRWFALLLVFFVLGSLATKL 58

Query: 143 KMAQKEAQGVAEKRKGRRGPGSVIGSSAAGCVCAFLSIFGVGGFEFSRLWQLGFVASFCT 202
              +K A G+AE R GRRGP +V+G+     + A L   G  G     L+  GFV SF  
Sbjct: 59  GYKRKAALGIAEARGGRRGPENVLGNGGVAAILALLYALGPTGAS---LFLAGFVGSFAA 115

Query: 203 KLSDTVSSEIGKAYGKTTYLVTTFKVVPRGTEGAVSVEGTFAGIFASILLAWVGCLTGQ 261
            L+DT +SEIGK  G+T  L+TT K VP GT G VS+ GT A +  S+L+A V  L G 
Sbjct: 116 ALADTWASEIGKLSGRTPRLITTLKPVPPGTSGGVSLLGTLASLLGSLLIALVAWLLGL 174

Members of this family have several predicted transmembrane helices. The function of these prokaryotic proteins is unknown. Length = 224

>gnl|CDD|224749 COG1836, COG1836, Predicted membrane protein [Function unknown]

 Score =  148 bits (376), Expect = 6e-44
 Identities = 75/187 (40%), Positives = 103/187 (55%), Gaps = 6/187 (3%)

Query: 76  SQPTWQSALLSNVVIFVLGSPILVSG-LSPSGIAAAFLLGTLTWRAFGPSGFLLVATYFI 134
           +Q      LL+ ++I  LG+    +  L  SG  +A LLG L     G   FLL+  +F 
Sbjct: 6   TQMAIDPLLLALLLILFLGALAYKAKALDLSGSLSAILLGALIIVFGGFKWFLLLLIFFA 65

Query: 135 IGTAATKVKMAQKEAQGVAEKRKGRRGPGSVIGSSAAGCVCAFLSIFGVGGFEFSRLWQL 194
           +G+ ATK K  +KEA GVAE R G R   +V+G+  A  + A L       +   +LW L
Sbjct: 66  LGSLATKYKYEEKEALGVAEGRDGARSLENVLGNGLAALLFAVLYAI----YPDPQLWFL 121

Query: 195 -GFVASFCTKLSDTVSSEIGKAYGKTTYLVTTFKVVPRGTEGAVSVEGTFAGIFASILLA 253
            GF AS  T  +DT++SEIGKAYGK   L+TTFK V  GT GAVS+ G  A +  + ++A
Sbjct: 122 GGFAASVATANADTLASEIGKAYGKRPRLITTFKRVEPGTSGAVSLVGELAAVAGAFIIA 181

Query: 254 WVGCLTG 260
            +  L G
Sbjct: 182 LLSYLVG 188

Length = 247

>gnl|CDD|213522 TIGR00297, TIGR00297, TIGR00297 family protein

 Score =  147 bits (372), Expect = 2e-43
 Identities = 73/181 (40%), Positives = 105/181 (58%), Gaps = 5/181 (2%)

Query: 80  WQSALLSNVVIFVLGSPILVSGLSPSGIAAAFLLGTLTWRAFGPSGFLLVATYFIIGTAA 139
           W SA++  V  F+L        L P G   A+++G +     G  G L++  +F +G+A 
Sbjct: 4   WLSAVILCV--FLLALAAYAPLLDPWGYGHAWIMGVIIILFAGFRGLLVILAFFFLGSAV 61

Query: 140 TKVKMAQKEAQGVAEKRKGRRGPGSVIGSSAAGCVCAFLSIFGVGGFEFSRLWQLGFVAS 199
           T+    +K+A G+AEKR G+RGP +V G+     + A    FG    E+     LG+VAS
Sbjct: 62  TRYGQEEKKAAGIAEKRSGQRGPKNVWGNGLTPALFALAIAFG---PEWDLWLALGYVAS 118

Query: 200 FCTKLSDTVSSEIGKAYGKTTYLVTTFKVVPRGTEGAVSVEGTFAGIFASILLAWVGCLT 259
             T LSDT++SEIGKAYGK   L+TT + V  GT+GA+SVEGT AG   ++ +A +G L 
Sbjct: 119 VATALSDTMASEIGKAYGKNPRLITTLQRVEPGTDGAISVEGTLAGFAGALAIALLGYLL 178

Query: 260 G 260
           G
Sbjct: 179 G 179

[Hypothetical proteins, Conserved]. Length = 237

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	264
TIGR00297	237	conserved hypothetical protein TIGR00297.	100.0
PF01940	226	DUF92: Integral membrane protein DUF92; InterPro:	100.0
COG1836	247	Predicted membrane protein [Function unknown]	100.0
KOG4491	323	consensus Predicted membrane protein [Function unk	100.0
COG0170	216	SEC59 Dolichol kinase [Lipid metabolism]	94.27
PF01148	259	CTP_transf_1: Cytidylyltransferase family; InterPr	93.46

>TIGR00297 conserved hypothetical protein TIGR00297

Probab=100.00  E-value=6.8e-56  Score=400.06  Aligned_cols=180  Identities=39%  Similarity=0.640  Sum_probs=166.6

Q ss_pred             hhHHHHHHHHHHHHHHHhHhhcCCChHHHHHHHHHHHHHHHhhchhHHHHHHHHHHhhhhhhhcchhhhhhhhhhhhcCC
Q 024662           79 TWQSALLSNVVIFVLGSPILVSGLSPSGIAAAFLLGTLTWRAFGPSGFLLVATYFIIGTAATKVKMAQKEAQGVAEKRKG  158 (264)
Q Consensus        79 ~w~~a~~~n~~l~~~~~~~~~k~LT~sGa~aA~lvG~l~~~~~G~~g~llLl~FFlssS~~TK~k~~~K~~l~~aekk~G  158 (264)
                      +|.++++++.+  +...+||+|+||++|+++|+++|++++..+|++|+.+++.||++||++||+|+++|++++++|||+|
T Consensus         3 ~~~~a~~~~~~--l~~~~~~~~~L~~sG~~~a~~vG~~~~~~~g~~~~~~ll~Ff~~sS~~Tk~~~~~K~~~~~~e~~gg   80 (237)
T TIGR00297         3 LWLSAVILCVF--LLALAAYAPLLDPWGYGHAWIMGVIIILFAGFRGLLVILAFFFLGSAVTRYGQEEKKAAGIAEKRSG   80 (237)
T ss_pred             HHHHHHHHHHH--HHHHHHHHccCCHhHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhHHHHhccHHHHHhcccccccCC
Confidence            59999999876  5556699999999999999999999988899999999999999999999999999999999999999


Q ss_pred             ccCcccccccchHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhhcchhhhhhhcccCCCeeEeeCCccCCCCCCcccc
Q 024662          159 RRGPGSVIGSSAAGCVCAFLSIFGVGGFEFSRLWQLGFVASFCTKLSDTVSSEIGKAYGKTTYLVTTFKVVPRGTEGAVS  238 (264)
Q Consensus       159 ~R~~~QVlaNg~va~l~All~~~~~~~~~~~~~~~l~fvas~Aaa~ADTwASEIG~ls~~~PrLITT~K~VppGTnGgVS  238 (264)
                      +||++||++||+++++|++++.+...   .+..+.++|++++||++|||||||||++|+++||+||||||||||||||||
T Consensus        81 ~R~~~qVlaNg~~~~~~al~~~~~~~---~~~~~~~~f~~s~A~a~aDT~ASEiG~ls~~~p~lItt~k~V~~GT~GgVS  157 (237)
T TIGR00297        81 QRGPKNVWGNGLTPALFALAIAFGPE---WDLWLALGYVASVATALSDTMASEIGKAYGKNPRLITTLQRVEPGTDGAIS  157 (237)
T ss_pred             CCCHHHHHHhhHHHHHHHHHHHhccc---chHHHHHHHHHHHHHHHcchHHHhhhhccCCCCeEeecCccCCCCCCCccc
Confidence            99999999999999999998877533   355778999999999999999999999999999999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHHHhcccC
Q 024662          239 VEGTFAGIFASILLAWVGCLTGQCA  263 (264)
Q Consensus       239 llGtlAsllGs~lIa~va~llg~i~  263 (264)
                      ++||+|+++|+++|+.+++++++++
T Consensus       158 ~~Gt~As~~Ga~~I~~~~~~~~~~~  182 (237)
T TIGR00297       158 VEGTLAGFAGALAIALLGYLLGLIS  182 (237)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcc
Confidence            9999999999999999998887643

>PF01940 DUF92: Integral membrane protein DUF92; InterPro: IPR002794 Many members of this family have no known function and are predicted to be integral membrane proteins

Probab=100.00  E-value=5.9e-55  Score=391.39  Aligned_cols=171  Identities=37%  Similarity=0.464  Sum_probs=160.5

Q ss_pred             HHHHHhHhhcCCChHHHHHHHHHHHHHHHhhchhHHHHHHHHHHhhhhhhhcchhhhhhhhhhhhcCCccCcccccccch
Q 024662           91 FVLGSPILVSGLSPSGIAAAFLLGTLTWRAFGPSGFLLVATYFIIGTAATKVKMAQKEAQGVAEKRKGRRGPGSVIGSSA  170 (264)
Q Consensus        91 ~~~~~~~~~k~LT~sGa~aA~lvG~l~~~~~G~~g~llLl~FFlssS~~TK~k~~~K~~l~~aekk~G~R~~~QVlaNg~  170 (264)
                      ++...+||+|+||++|+++|+++|++++...||+++++|+.||++||++||+|+++|++++++|+|+|+|||+||+|||+
T Consensus         7 ~l~~~a~~~k~Lt~sGa~aa~~vG~~~~~~~g~~~~~~L~~FF~~ss~~Tk~~~~~K~~~~~~~~~~g~R~~~QVlaNg~   86 (226)
T PF01940_consen    7 LLAILAYKKKSLTLSGALAAFLVGTLIYGFGGWPWFLLLLAFFISSSLATKYKKERKEKLGEAEKKGGRRDWWQVLANGG   86 (226)
T ss_pred             HHHHHHHHHCCCCHhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHhCChHHHHHhcccccCCCCCChHHhhhccH
Confidence            45668899999999999999999999998999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhhcchhhhhhhcccCCCeeEeeCCccCCCCCCcccchhhHHHHHHHHH
Q 024662          171 AGCVCAFLSIFGVGGFEFSRLWQLGFVASFCTKLSDTVSSEIGKAYGKTTYLVTTFKVVPRGTEGAVSVEGTFAGIFASI  250 (264)
Q Consensus       171 va~l~All~~~~~~~~~~~~~~~l~fvas~Aaa~ADTwASEIG~ls~~~PrLITT~K~VppGTnGgVSllGtlAsllGs~  250 (264)
                      ++++|+++|.+.+  ...++.+.++|++++|||+|||||||||++|+++||+||||||||||||||||++||+|+++|++
T Consensus        87 ~a~~~al~~~~~~--~~~~~~~~~~~~~s~A~a~aDTwASEiG~ls~~~P~lItt~k~V~~Gt~GgVS~lGt~as~~Ga~  164 (226)
T PF01940_consen   87 VAALCALLYAFFP--STPAPLLLLAFLGSIAAANADTWASEIGVLSKGPPRLITTFKRVPPGTSGGVSLLGTLASLAGAL  164 (226)
T ss_pred             HHHHHHHHHHHhc--ccchHHHHHHHHHHHHHHhhhHHHHhhhhhcCCCCeEeeCCcCCCCCCCCeechHHHHHHHHHHH
Confidence            9999999887753  12467899999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhcccC
Q 024662          251 LLAWVGCLTGQCA  263 (264)
Q Consensus       251 lIa~va~llg~i~  263 (264)
                      +|++++++++..+
T Consensus       165 ~Ia~~~~~~~~~~  177 (226)
T PF01940_consen  165 LIALVAFLLGLIS  177 (226)
T ss_pred             HHHHHHHHHHccc
Confidence            9999999988543

; GO: 0016021 integral to membrane

>COG1836 Predicted membrane protein [Function unknown]

Probab=100.00  E-value=2.4e-50  Score=363.89  Aligned_cols=179  Identities=39%  Similarity=0.467  Sum_probs=167.4

Q ss_pred             hhHHHHHHHHHHHHHHHhHhhcCCChHHHHHHHHHHHHHHHhhchhHHHHHHHHHHhhhhhhhcchhhhhhhhhhhhcCC
Q 024662           79 TWQSALLSNVVIFVLGSPILVSGLSPSGIAAAFLLGTLTWRAFGPSGFLLVATYFIIGTAATKVKMAQKEAQGVAEKRKG  158 (264)
Q Consensus        79 ~w~~a~~~n~~l~~~~~~~~~k~LT~sGa~aA~lvG~l~~~~~G~~g~llLl~FFlssS~~TK~k~~~K~~l~~aekk~G  158 (264)
                      +|+.++++++.  ....+||.|.||++|.++|+++|.+++...||.||++++.||++||.+||+|+++|++++.+|+++|
T Consensus        12 ~~l~all~~~~--L~~la~~~k~Ld~~G~~~A~~lG~~i~~~~g~~~fllll~Ff~~g~l~Tk~~~~~K~~~gvaE~~~g   89 (247)
T COG1836          12 PLLLALLLILF--LGALAYKAKALDLSGSLSAILLGALIIVFGGFKWFLLLLIFFALGSLATKYKYEEKEALGVAEGRDG   89 (247)
T ss_pred             HHHHHHHHHHH--HHHHHHHhccCChhhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccccccc
Confidence            49999999886  4556699999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccCcccccccchHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhhcchhhhhhhcccCCCeeEeeCCccCCCCCCcccc
Q 024662          159 RRGPGSVIGSSAAGCVCAFLSIFGVGGFEFSRLWQLGFVASFCTKLSDTVSSEIGKAYGKTTYLVTTFKVVPRGTEGAVS  238 (264)
Q Consensus       159 ~R~~~QVlaNg~va~l~All~~~~~~~~~~~~~~~l~fvas~Aaa~ADTwASEIG~ls~~~PrLITT~K~VppGTnGgVS  238 (264)
                      .|+.+||++|++++.+|+++|...++   .+.++..+|++|+|+++|||||||||+.++++|||||||||||||||||||
T Consensus        90 ~R~~~NV~gn~l~~~l~av~~~~~~~---~~~~~~~~~~~SvAta~aDT~ASEiG~~~~~~p~lITtfkrV~~Gt~GaVS  166 (247)
T COG1836          90 ARSLENVLGNGLAALLFAVLYAIYPD---PQLWFLGGFAASVATANADTLASEIGKAYGKRPRLITTFKRVEPGTSGAVS  166 (247)
T ss_pred             cccHHHHhhccHHHHHHHHHHHhCCC---chHHHHHHHHHHHHHHhhhHHHHHHhHhhCCCeEEEEeeeEcCCCCCCccc
Confidence            99999999999999999998855432   245788999999999999999999999999999999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHHHhccc
Q 024662          239 VEGTFAGIFASILLAWVGCLTGQC  262 (264)
Q Consensus       239 llGtlAsllGs~lIa~va~llg~i  262 (264)
                      ++||+|+++|+++|++++++++.+
T Consensus       167 ~~GelAav~Ga~iIal~~~l~~~~  190 (247)
T COG1836         167 LVGELAAVAGAFIIALLSYLVGYI  190 (247)
T ss_pred             hhhhHHHHHHHHHHHHHHHHHHhc
Confidence            999999999999999999999876

>KOG4491 consensus Predicted membrane protein [Function unknown]

Probab=100.00  E-value=3.2e-42  Score=313.19  Aligned_cols=183  Identities=23%  Similarity=0.293  Sum_probs=158.3

Q ss_pred             cCc-hhHHHHHHHHHHHHHHHhHhhcCCChHHHHHHHHHHHHHHHhhchhHHHHHHHHHHhhhhhhhcchhhhhhhhhhh
Q 024662           76 SQP-TWQSALLSNVVIFVLGSPILVSGLSPSGIAAAFLLGTLTWRAFGPSGFLLVATYFIIGTAATKVKMAQKEAQGVAE  154 (264)
Q Consensus        76 ~~~-~w~~a~~~n~~l~~~~~~~~~k~LT~sGa~aA~lvG~l~~~~~G~~g~llLl~FFlssS~~TK~k~~~K~~l~~ae  154 (264)
                      .+| +|+.++++..+  +...+||+|+|+.||++++++||++.-. ..-+.|..|++||++||.+||+|++.|++++.+|
T Consensus        37 ipp~RwlFsvvvp~l--i~~~~lkrkSld~SGa~~G~lV~filtI-a~h~ff~sl~~fF~sss~~tkfr~~~k~r~~s~~  113 (323)
T KOG4491|consen   37 IPPWRWLFSVVVPVL--IVSNGLKRKSLDHSGALGGLLVGFILTI-ANHSFFTSLLMFFLSSSKLTKFRGEVKKRLDSEY  113 (323)
T ss_pred             CCcHHHHHHHHHHHH--HHHHHHhhcccccccchhHHHHHHHHHH-hcchhHHHHHHHHHccchhhhHHHHHHHHHHHHH
Confidence            344 99999999876  4456799999999999999999987421 2344588999999999999999999999999888


Q ss_pred             hcC-CccCcccccccchHHHHHHHHHHHhcCCcc---------hHHHHHHHHHHHHHHhhcchhhhhhh-cccCCCeeEe
Q 024662          155 KRK-GRRGPGSVIGSSAAGCVCAFLSIFGVGGFE---------FSRLWQLGFVASFCTKLSDTVSSEIG-KAYGKTTYLV  223 (264)
Q Consensus       155 kk~-G~R~~~QVlaNg~va~l~All~~~~~~~~~---------~~~~~~l~fvas~Aaa~ADTwASEIG-~ls~~~PrLI  223 (264)
                      +|+ |||+|.||+|||+++..++++|....++..         ...++.++.++++|||++|||+||+| ++|++.||+|
T Consensus       114 ~eg~GQRNWvQVlCNggva~~Lally~~~~G~ge~~vDf~~~y~~swl~~~~~~a~ACcnGDTWsSElG~VLS~~~PrlI  193 (323)
T KOG4491|consen  114 KEGLGQRNWVQVLCNGGVATELALLYMIENGPGEIPVDFSKQYSASWLCLSLLAALACCNGDTWSSELGPVLSKSSPRLI  193 (323)
T ss_pred             hhccCccchhhhhcCCcchHHHHHHHHHhcCCCccccchHHHHHHHHHHHHHHHHHHhcCCChhhhhhcchhccCCCceE
Confidence            875 999999999999999999999887665421         13456789999999999999999999 9999999999


Q ss_pred             eCCccCCCCCCcccchhhHHHHHHHHHHHHHHHHHhcc
Q 024662          224 TTFKVVPRGTEGAVSVEGTFAGIFASILLAWVGCLTGQ  261 (264)
Q Consensus       224 TT~K~VppGTnGgVSllGtlAsllGs~lIa~va~llg~  261 (264)
                      |||||||+|||||||+.|.+++++|+.++++--++.++
T Consensus       194 tTw~~Vp~GTNGGVt~~Gl~~sLlgGt~VG~~yf~t~l  231 (323)
T KOG4491|consen  194 TTWEKVPVGTNGGVTVVGLVSSLLGGTFVGIAYFLTQL  231 (323)
T ss_pred             EeeeecccCCCCCEeeHHHHHHHhccceeehHhhhhhh
Confidence            99999999999999999999999999999775544443

>COG0170 SEC59 Dolichol kinase [Lipid metabolism]

Probab=94.27  E-value=0.57  Score=42.18  Aligned_cols=53  Identities=32%  Similarity=0.470  Sum_probs=42.6

Q ss_pred             HHHHHHHHHHhhcchhhhhhhcccCCCeeEeeCCccCCCCCCcccchhhHHHHHHHHHHHHHH
Q 024662          193 QLGFVASFCTKLSDTVSSEIGKAYGKTTYLVTTFKVVPRGTEGAVSVEGTFAGIFASILLAWV  255 (264)
Q Consensus       193 ~l~fvas~Aaa~ADTwASEIG~ls~~~PrLITT~K~VppGTnGgVSllGtlAsllGs~lIa~v  255 (264)
                      -...++=++.+.+|+.||=+|+.+|++++-.-+-|          |++|++|.++.++++..+
T Consensus       114 ~~~~~~I~~l~~GD~lAsiiG~~~G~~~~~~~~~K----------SleGSla~fi~~~l~~~~  166 (216)
T COG0170         114 EVAIAGILVLALGDGLASIIGKRYGRHKRILGNGK----------SLEGSLAFFIASFLVLLV  166 (216)
T ss_pred             HHHHHHHHHHHHhhHHHHHhCcccCccccccCCCC----------chhhhHHHHHHHHHHHHH
Confidence            45566677788999999999999999744444445          899999999999998753

>PF01148 CTP_transf_1: Cytidylyltransferase family; InterPro: IPR000374 Phosphatidate cytidylyltransferase (2

Probab=93.46  E-value=0.14  Score=44.64  Aligned_cols=54  Identities=17%  Similarity=0.363  Sum_probs=40.4

Q ss_pred             HHHHHHHHhhcchhhhhhhcccCCCeeEeeCCccCCCCCCcccchhhHHHHHHHHHHHHHHHH
Q 024662          195 GFVASFCTKLSDTVSSEIGKAYGKTTYLVTTFKVVPRGTEGAVSVEGTFAGIFASILLAWVGC  257 (264)
Q Consensus       195 ~fvas~Aaa~ADTwASEIG~ls~~~PrLITT~K~VppGTnGgVSllGtlAsllGs~lIa~va~  257 (264)
                      .+.+-...+.+|++|+=+|+.+||+..         |-.+..=|+||++++++++++++.+..
T Consensus       132 ~~~~i~~~~~gD~~A~l~G~~fGk~~~---------~~~sp~KT~EGsi~~~i~~~i~~~~~~  185 (259)
T PF01148_consen  132 ALIGILILGIGDSFAYLVGRRFGKHLA---------PKISPKKTWEGSIAGFISSFIISFLLL  185 (259)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCCcC---------CCCCCCCCHHHHhHHHHHHHHHHHHHH
Confidence            344556677899999999999999611         122333399999999999999877554

7.7.41 from EC) [, , ] (also known as CDP- diacylglycerol synthase) (CDS) is the enzyme that catalyzes the synthesis of CDP-diacylglycerol from CTP and phosphatidate (PA): CTP + phosphatidate = diphosphate + CDP-diacylglycerol CDP-diacylglycerol is an important branch point intermediate in both prokaryotic and eukaryotic organisms. CDS is a membrane-bound enzyme.; GO: 0016772 transferase activity, transferring phosphorus-containing groups, 0016020 membrane

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	264
3dh4_A	530	Sodium/glucose cotransporter; membrane protein, sy	89.02
2xq2_A	593	Sodium/glucose cotransporter; transport protein, i	82.01

>3dh4_A Sodium/glucose cotransporter; membrane protein, symporter, sugar transport, SGLT, ION TRAN membrane, sodium transport, symport; HET: GAL; 2.70A {Vibrio parahaemolyticus}

Probab=89.02  E-value=0.88  Score=43.79  Aligned_cols=58  Identities=5%  Similarity=-0.027  Sum_probs=37.0

Q ss_pred             HHhHhhcCCChHHHHHHHHHHHHHHHhh-----ch-------hHHHHHHHHHHhhhhhhhcchhhhhhhh
Q 024662           94 GSPILVSGLSPSGIAAAFLLGTLTWRAF-----GP-------SGFLLVATYFIIGTAATKVKMAQKEAQG  151 (264)
Q Consensus        94 ~~~~~~k~LT~sGa~aA~lvG~l~~~~~-----G~-------~g~llLl~FFlssS~~TK~k~~~K~~l~  151 (264)
                      ..++.-|..|..|++++.++|.+++...     .+       .++++-+..++..|++||-+.+++++.+
T Consensus       414 llgl~wkr~~~~gA~~g~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~vSl~t~~~~~~~~~~~  483 (530)
T 3dh4_A          414 LLGLFWKKTTSKGAIIGVVASIPFALFLKFMPLSMPFMDQMLYTLLFTMVVIAFTSLSTSINDDDPKGIS  483 (530)
T ss_dssp             HHHHHCTTCCHHHHHHHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHHHHHHHHHTTCSSSSCTTCCC
T ss_pred             HHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHcCCccHHHHHHHHHHHHHHHHHHHHhhcCCCcccccccc
Confidence            3556667899999999999998764321     11       1233334456677888876666554433

>2xq2_A Sodium/glucose cotransporter; transport protein, inverted repeats, LEUT-fold, galactose; 2.73A {Vibrio parahaemolyticus} PDB: 2xq2_B 2kpe_A

Probab=82.01  E-value=5.4  Score=38.80  Aligned_cols=51  Identities=6%  Similarity=-0.016  Sum_probs=32.3

Q ss_pred             HhHhhcCCChHHHHHHHHHHHHHHHhhc-----h-------hHHHHHHHHHHhhhhhhhcchh
Q 024662           95 SPILVSGLSPSGIAAAFLLGTLTWRAFG-----P-------SGFLLVATYFIIGTAATKVKMA  145 (264)
Q Consensus        95 ~~~~~k~LT~sGa~aA~lvG~l~~~~~G-----~-------~g~llLl~FFlssS~~TK~k~~  145 (264)
                      .++.-|..|..|++++.++|.+++...-     .       .++.+-+..++..|++||-+.+
T Consensus       444 lglfwkr~~~~gA~~g~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~v~vSl~t~~~~~  506 (593)
T 2xq2_A          444 LGLFWKKTTSKGAIIGVVASIPFALFLKFMPLSMPFMDQMLYTLLFTMVVIAFTSLSTSINDD  506 (593)
T ss_dssp             HHHHCTTCCHHHHHHHHHHHHHHHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHHHHCSSSS
T ss_pred             HHHHhCCCCHHHHHHHHHHHHHHHHHHHHHcCCccHHHHHHHHHHHHHHHHHhheeecCCCch
Confidence            4555677999999999999988653221     1       1122223345677888875444

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00