Citrus Sinensis ID: 024686
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 264 | ||||||
| 449495159 | 263 | PREDICTED: uncharacterized LOC101210861 | 0.996 | 1.0 | 0.768 | 1e-113 | |
| 449456933 | 263 | PREDICTED: uncharacterized protein LOC10 | 0.996 | 1.0 | 0.765 | 1e-113 | |
| 225426574 | 266 | PREDICTED: uncharacterized protein LOC10 | 0.992 | 0.984 | 0.787 | 1e-112 | |
| 357462337 | 266 | hypothetical protein MTR_3g080840 [Medic | 0.988 | 0.981 | 0.773 | 1e-110 | |
| 356547509 | 266 | PREDICTED: uncharacterized protein LOC10 | 0.992 | 0.984 | 0.779 | 1e-110 | |
| 388491274 | 266 | unknown [Medicago truncatula] | 0.988 | 0.981 | 0.769 | 1e-110 | |
| 224057988 | 237 | predicted protein [Populus trichocarpa] | 0.882 | 0.983 | 0.842 | 1e-110 | |
| 356499600 | 270 | PREDICTED: uncharacterized protein LOC10 | 0.992 | 0.970 | 0.764 | 1e-109 | |
| 255555763 | 277 | conserved hypothetical protein [Ricinus | 0.943 | 0.898 | 0.752 | 1e-107 | |
| 18408106 | 250 | uncharacterized protein [Arabidopsis tha | 0.939 | 0.992 | 0.726 | 1e-104 |
| >gi|449495159|ref|XP_004159751.1| PREDICTED: uncharacterized LOC101210861 [Cucumis sativus] | Back alignment and taxonomy information |
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Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 203/264 (76%), Positives = 223/264 (84%), Gaps = 1/264 (0%)
Query: 1 MVVLSLQVVRFPTPPYQISLRRQSTDKITRCGIAEPSGEPAPLGQKTKYNDGFFEKAFMT 60
MVVL LQ ++F T P + R+ + RCGIAE SGEPAPLGQKTKYNDG FEK FMT
Sbjct: 1 MVVLKLQSIQFFTAPPKEIRNRKIKSRFIRCGIAEASGEPAPLGQKTKYNDGPFEKVFMT 60
Query: 61 LFARKMEKFASPAKSKTETKKKRWFDFGYDYESFVDVSKRVMEGRSRQQQQEVVREVLLS 120
LFARKMEKFA+ AK + + K+ W+DF YDYE FVDVSKRVM+G++R QQQ VVREVLLS
Sbjct: 61 LFARKMEKFAN-AKEQRKKKEGLWWDFLYDYERFVDVSKRVMQGKNRMQQQIVVREVLLS 119
Query: 121 MLPPGAPAQFRKLFPPTKWAAEFNAALTVPFFHWLVGPSEVVEVEINGEKQRSGVHIKKC 180
MLPPGAPAQFRKLFPPTKWA EFNA +TVPFF WLVGPSEVVEVE+NG KQRSGVHIKKC
Sbjct: 120 MLPPGAPAQFRKLFPPTKWACEFNALITVPFFQWLVGPSEVVEVEVNGIKQRSGVHIKKC 179
Query: 181 RYLENSGCVGMCVNMCKFPTQDFFTREFGLPLTMIPNFEDMSCEMVYGQVPPSFEDDPVS 240
RYLENSGCVGMCVNMCK PTQDFFT EFGLPLTM PNFEDMSCEM+YGQVPP FE+DPVS
Sbjct: 180 RYLENSGCVGMCVNMCKIPTQDFFTNEFGLPLTMNPNFEDMSCEMIYGQVPPPFEEDPVS 239
Query: 241 TQPCFTDICSNANPSSPVCPKLQA 264
QPC+ DICS A S+P+CPKL A
Sbjct: 240 EQPCYKDICSMAITSAPLCPKLLA 263
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Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449456933|ref|XP_004146203.1| PREDICTED: uncharacterized protein LOC101210861 [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|225426574|ref|XP_002279815.1| PREDICTED: uncharacterized protein LOC100256431 [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|357462337|ref|XP_003601450.1| hypothetical protein MTR_3g080840 [Medicago truncatula] gi|357517075|ref|XP_003628826.1| hypothetical protein MTR_8g067370 [Medicago truncatula] gi|355490498|gb|AES71701.1| hypothetical protein MTR_3g080840 [Medicago truncatula] gi|355522848|gb|AET03302.1| hypothetical protein MTR_8g067370 [Medicago truncatula] | Back alignment and taxonomy information |
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| >gi|356547509|ref|XP_003542154.1| PREDICTED: uncharacterized protein LOC100780474 [Glycine max] | Back alignment and taxonomy information |
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| >gi|388491274|gb|AFK33703.1| unknown [Medicago truncatula] | Back alignment and taxonomy information |
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| >gi|224057988|ref|XP_002299424.1| predicted protein [Populus trichocarpa] gi|222846682|gb|EEE84229.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|356499600|ref|XP_003518626.1| PREDICTED: uncharacterized protein LOC100815863 [Glycine max] | Back alignment and taxonomy information |
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| >gi|255555763|ref|XP_002518917.1| conserved hypothetical protein [Ricinus communis] gi|223541904|gb|EEF43450.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
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| >gi|18408106|ref|NP_564838.1| uncharacterized protein [Arabidopsis thaliana] gi|6633822|gb|AAF19681.1|AC009519_15 F1N19.25 [Arabidopsis thaliana] gi|33589794|gb|AAQ22663.1| At1g64680 [Arabidopsis thaliana] gi|110740704|dbj|BAE98453.1| hypothetical protein [Arabidopsis thaliana] gi|332196152|gb|AEE34273.1| uncharacterized protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 264 | ||||||
| TAIR|locus:2010856 | 250 | AT1G64680 "AT1G64680" [Arabido | 0.905 | 0.956 | 0.704 | 1.1e-94 | |
| TAIR|locus:505006097 | 264 | D27 "AT1G03055" [Arabidopsis t | 0.719 | 0.719 | 0.378 | 3.1e-35 | |
| TAIR|locus:504955232 | 258 | AT4G01995 "AT4G01995" [Arabido | 0.912 | 0.934 | 0.338 | 2.8e-27 |
| TAIR|locus:2010856 AT1G64680 "AT1G64680" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 942 (336.7 bits), Expect = 1.1e-94, P = 1.1e-94
Identities = 174/247 (70%), Positives = 199/247 (80%)
Query: 18 ISLRRQSTDKITRCGIAEPSGEPAPLGQKTKYNDGFFEKAFMTLFARKMEKFASPAKSKT 77
++ RR+ST RCGIAEPSGEPAP+G KT+Y DG E+ FM LFARKM+KF S K K
Sbjct: 12 LTFRRRST----RCGIAEPSGEPAPMGLKTRYEDGLVERVFMGLFARKMDKFGS--KKKK 65
Query: 78 ETKKKRWFDFGYDYESFVDVSKRVMEGXXXXXXXXXXXXXXXXMLPPGAPAQFRKLFPPT 137
+TK+K +++ YDYESFV+VSKRVM+G MLPPGAP QFRKLFPPT
Sbjct: 66 DTKEKGFWE--YDYESFVEVSKRVMQGRSRVQQQEAVREVLLSMLPPGAPEQFRKLFPPT 123
Query: 138 KWAAEFNAALTVPFFHWLVGPSEVVEVEINGEKQRSGVHIKKCRYLENSGCVGMCVNMCK 197
KWAAEFNAALTVPFFHWLVGPS+V+EVE+NG KQRSGV IKKCRYLENSGCVGMCVNMCK
Sbjct: 124 KWAAEFNAALTVPFFHWLVGPSQVIEVEVNGVKQRSGVRIKKCRYLENSGCVGMCVNMCK 183
Query: 198 FPTQDFFTREFGLPLTMIPNFEDMSCEMVYGQVPPSFEDDPVSTQPCFTDICSNANPSSP 257
PTQDFFT EFGLPLTM PN+EDMSCEM+YGQ PP+FE+D + QPC DICS +NPSSP
Sbjct: 184 IPTQDFFTNEFGLPLTMNPNYEDMSCEMIYGQAPPAFEEDVATKQPCLADICSMSNPSSP 243
Query: 258 VCPKLQA 264
+CPKL+A
Sbjct: 244 ICPKLEA 250
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| TAIR|locus:505006097 D27 "AT1G03055" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:504955232 AT4G01995 "AT4G01995" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| GSVIVG00000511001 | SubName- Full=Chromosome chr2 scaffold_105, whole genome shotgun sequence; (266 aa) | |||||||
(Vitis vinifera) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 264 | |||
| pfam13225 | 85 | pfam13225, DUF4033, Domain of unknown function (DU | 2e-49 | |
| cd00580 | 113 | cd00580, CHMI, 5-carboxymethyl-2-hydroxymuconate i | 0.004 |
| >gnl|CDD|221990 pfam13225, DUF4033, Domain of unknown function (DUF4033) | Back alignment and domain information |
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Score = 157 bits (399), Expect = 2e-49
Identities = 59/85 (69%), Positives = 65/85 (76%), Gaps = 1/85 (1%)
Query: 154 WLVGPSEVVEVEIN-GEKQRSGVHIKKCRYLENSGCVGMCVNMCKFPTQDFFTREFGLPL 212
WLVGP EV EVE G ++SGV IKKCRYLE SGC GMCVN CK PTQ FF EFGLPL
Sbjct: 1 WLVGPCEVNEVENGLGRGEKSGVLIKKCRYLEESGCAGMCVNTCKLPTQTFFKEEFGLPL 60
Query: 213 TMIPNFEDMSCEMVYGQVPPSFEDD 237
TM PNFED SC+M++GQ PP E+D
Sbjct: 61 TMEPNFEDYSCQMIFGQTPPPIEED 85
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This presumed domain is functionally uncharacterized. This domain family is found in bacteria and eukaryotes, and is approximately 80 amino acids in length. Length = 85 |
| >gnl|CDD|238324 cd00580, CHMI, 5-carboxymethyl-2-hydroxymuconate isomerase (CHMI) is a trimeric enzyme catalyzing the isomerization of the unsaturated ketone 5-(carboxymethyl)-2-hydroxymuconate to 5-(carboxymethyl)-2-oxo-3-hexene-1,6-dionate | Back alignment and domain information |
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Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 264 | |||
| PF13225 | 86 | DUF4033: Domain of unknown function (DUF4033) | 100.0 |
| >PF13225 DUF4033: Domain of unknown function (DUF4033) | Back alignment and domain information |
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Probab=100.00 E-value=2.8e-55 Score=343.38 Aligned_cols=84 Identities=74% Similarity=1.380 Sum_probs=82.8
Q ss_pred ccccceeeEEEe--ecCeeeeccEEEceeceeecccccccccccccCcccchhhhccCCceeeccCCccceeeEeeCCCC
Q 024686 154 WLVGPSEVVEVE--INGEKQRSGVHIKKCRYLENSGCVGMCVNMCKFPTQDFFTREFGLPLTMIPNFEDMSCEMVYGQVP 231 (264)
Q Consensus 154 WLvGP~ev~~ve--v~G~~~~sgV~IeKCRyLEeSgC~GmCvN~CKiPTQ~FF~d~~GlpLtM~PNFeD~SCqm~FG~~P 231 (264)
||||||+|+++| .+|.+++|||+||||||||||||+|||+|+||+|||+||+|+|||||||+||||||||||+||++|
T Consensus 1 WLvGp~~v~~~e~~~~~~~~~sgV~i~kCRyLEes~C~g~C~N~CK~PtQ~Ff~~~~Glpl~M~PNfed~SC~~~FG~~P 80 (86)
T PF13225_consen 1 WLVGPCEVNEVEENGNGRGQKSGVHIEKCRYLEESGCAGMCVNMCKIPTQTFFKEEFGLPLTMEPNFEDFSCQMIFGQTP 80 (86)
T ss_pred CcccccEeeEeeccCCCccccceEEEEEeEEeecCCceeeeehhcccchHHHHHhccCCceEecCCCcCcEEEEEcCCCC
Confidence 999999999999 788999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCC
Q 024686 232 PSFEDD 237 (264)
Q Consensus 232 Pp~eeD 237 (264)
||+|||
T Consensus 81 pp~eeD 86 (86)
T PF13225_consen 81 PPIEED 86 (86)
T ss_pred CCCCCC
Confidence 999998
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Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
No hit with e-value below 0.005
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00