Citrus Sinensis ID: 024730

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260---
Protein Sequence
MADKPSKALVLYGDGLARFVEPSHAHLHSLASKAACGFLSLPIAPPSESEEERIVREFAVLIDANQDYLSGIGEHTTELKWEEKSPFQTISDRFMGLKAALITTNSRLKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGAGEKTNDDKGKAVAHDLEYINALVRVILQMAQPATEVGSRLHLSVVLSYGQVLEADNSNLSVLISIDEKSSDLSALFPRQSYTMKGETPRNDVR
Secondary Structure (PSIPRED)
cccccccEEEEEccccccccccccccHHHHHHHcccccEEcccccccccHHHHHHHHHHHHHHHcccccccccccccccccccccccccHHHHHHcHHHHHHHccccccccccccccEEEEcHHHHHHccccccccHHHHHHHHHHHHccccccccccccccEEEEEccccccccccccccccccHHHHHHHHHHHHHHcccccccccEEEEEEEEEccccccccccccEEEEcccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccEEEEEccccHHHcccccccHHHHHHHcccccccccccccccccccHHHHHHHHHHcHHHHHcccccccccccccccccccccHHHHHHccHEEEEcccccHHHHHHHcccEEEEHHHHHHcccccccccHHHHHHHHHHHcccccccccccccccEEEEEEEccccccccccccccccHHHHHHHHHHHHHHcccccHHHHEEEEEEEEEccccccccccccEEEcccccccHHHHHccccccEEccccccccccc
Coil and Loop (DISEMBL)
MADKPSKALVLYGDGlarfvepshahlHSLASKAAcgflslpiappseseeERIVREFAVLIDANQDYLSGIGEhttelkweekspfqtISDRFMGLKAALITTNSRLKSFGDKLGFATLQLNELIetsdslsgspIDVVASELLKLLGlqrgkmeevsQFDLVLVHIgagektnddkgkaVAHDLEYINALVRVILQMAQPATEVGSRLHLSVVLSYGQVLEADNSNLSVLISIdekssdlsalfprqsytmkgetprndvr
Flexible Loop (DISEMBL)
MADKPSKALVLYGDGLARFVEPSHAHLHSLASKAACGFLSLPIAPPSESEEERIVREFAVLIDANQDYLSGIGEhttelkweekSPFQTISDRFMGLKAALITTNSRLKSFGDKLGFATLQLNELIEtsdslsgspIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGAgektnddkgkAVAHDLEYINALVRVILQMAQPATEVGSRLHLSVVLSYGQVLEADNSNLSVLISIDekssdlsalfprqsytmkgetprndvr
Low Complexity Region (SEG)
MADKPSKALVLYGDGLARFVEPshahlhslaskaaCGFLSLPIAPPSESEEERIVREFAVLIDANQDYLSGIGEHTTELKWEEKSPFQTISDRFMGLKAALITTNSRLKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGAGEKTNDDKGKAVAHDLEYINALVRVILQMAQPATEVGSRLHLSVVLSYGQVLEADNSNLSVLISIDEKSSDLSALFPRQSYTMKGETPRNDVR
Disordered region (IsUnstruct)
********LVLYGDGLARFVEPSHAHLHSLASKAACGFLSLPI*********RIVREFAVLIDANQDYLSGIGEHTTELKWEEKSPFQTISDRFMGLKAALITTNSRLKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGAGEKTNDDKGKAVAHDLEYINALVRVILQMAQPATEVGSRLHLSVVLSYGQVLEADNSNLSVLISI****************************
Disordered Region (DISOPRED)
****PSK*LVLYGDGLARFVEPSHAHLHSLASKAACGFL*****************EFAVLIDANQDYLSG*****************TISDRFMGLKAALITTNSRLKSFGDKLGFATLQLN*****************ASELLKLLGLQRGKMEEVSQFDLVLVHIGAGEKT*****KAVAHDLEYINALVRVILQMAQ***EVGSRLHLSVVLSYGQVLEAD******************ALFPRQSYTM**********
Disordered Region (DISEMBL)
MADKPSKALVLYGDGLARFVEPSHAHLHSLASKAACGFLSLPIAPPSESEEERIVREFAVLIDANQDYLSGIGEHTTELKWEEKSPFQTISDRFMGLKAALITTNSRLKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGAGEKTNDDKGKAVAHDLEYINALVRVILQMAQPATEVGSRLHLSVVLSYGQVLEADNSNLSVLISIDEKSSDLSALFPRQSYTM**********
Disordered Region (DISPRO)
****PSKALVLYGDGLARFVEPSHAHLHSLASKAACGFLSLPIAP***SEEERIVREFAVLIDANQDYLSGIG**TTELKW*EKSPFQTISDRFMGLKAALITTNSRLKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGAGEKTNDDKGKAVAHDLEYINALVRVILQMAQPATEVGSRLHLSVVLSYGQVLEADNSNLSVLISIDEKSSDLSALFPRQSYTMK*********
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
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Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MADKPSKALVLYGDGLARFVEPSHAHLHSLASKAACGFLSLPIAPPSESEEERIVREFAVLIDANQDYLSGIGEHTTELKWEEKSPFQTISDRFMGLKAALITTNSRLKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGAGEKTNDDKGKAVAHDLEYINALVRVILQMAQPATEVGSRLHLSVVLSYGQVLEADNSNLSVLISIDEKSSDLSALFPRQSYTMKGETPRNDVR
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	263
225429560	320	PREDICTED: uncharacterized protein LOC10	0.996	0.818	0.581	1e-82
224092198	309	predicted protein [Populus trichocarpa]	0.954	0.812	0.600	8e-82
356564061	308	PREDICTED: uncharacterized protein LOC10	0.950	0.811	0.562	5e-75
255647370	308	unknown [Glycine max]	0.950	0.811	0.558	3e-74
255550804	313	conserved hypothetical protein [Ricinus	0.969	0.814	0.562	4e-74
449450351	315	PREDICTED: uncharacterized protein LOC10	0.977	0.815	0.539	3e-73
356552344	307	PREDICTED: uncharacterized protein LOC10	0.946	0.811	0.558	5e-73
449494427	315	PREDICTED: uncharacterized LOC101217985	0.977	0.815	0.536	5e-73
388507454	304	unknown [Lotus japonicus]	0.931	0.805	0.549	2e-68
357437483	306	hypothetical protein MTR_1g016410 [Medic	0.920	0.790	0.516	3e-65

>gi|225429560|ref|XP_002279873.1| PREDICTED: uncharacterized protein LOC100255893 [Vitis vinifera] gi|296081666|emb|CBI20671.3| unnamed protein product [Vitis vinifera]

 Score =  311 bits (798), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 153/263 (58%), Positives = 199/263 (75%), Gaps = 1/263 (0%)

Query: 1   MADKPSKALVLYGDGLARFVEPSHAHLHSLASKAACGFLSLPIAPPSESEEERIVREFAV 60
           MADKPS+ LVLYGDGLARF+ PSH HLH LAS+  CGFLSL  +PPSE+E+ERIVREFA 
Sbjct: 1   MADKPSRGLVLYGDGLARFINPSHTHLHDLASRGICGFLSLSNSPPSETEDERIVREFAQ 60

Query: 61  LIDANQDYLSGIGEHTTELKWEEKSPFQTISDRFMGLKAALITTNSRLKSFGDKLGFATL 120
           L+D+ +  L       T L+ ++KS   TIS+RFMG++AA++  NS L SFG  LGF  +
Sbjct: 61  LLDSCEASLGVNVGGATNLECQQKSLMPTISERFMGMRAAIVANNSSLTSFGGTLGFTVM 120

Query: 121 QLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGAGEKTNDDKGK 180
           Q +ELI+ +  LS  P+DVVASE LKLLG Q GK  E SQFDL+ +HIGAGEK N  + +
Sbjct: 121 QTDELIKNNHPLSEPPVDVVASESLKLLGFQEGKTLETSQFDLIFMHIGAGEKAN-GQTE 179

Query: 181 AVAHDLEYINALVRVILQMAQPATEVGSRLHLSVVLSYGQVLEADNSNLSVLISIDEKSS 240
            +A+D+EYIN LV  I+Q A+P +E+GSRLHLS+V+SYG V + D+ +LSVL++ +E +S
Sbjct: 180 IIANDVEYINGLVGRIMQTAEPGSEIGSRLHLSLVMSYGAVSKDDDPSLSVLVTKNENNS 239

Query: 241 DLSALFPRQSYTMKGETPRNDVR 263
           DLS+L PRQSYTMKG  PR+++R
Sbjct: 240 DLSSLSPRQSYTMKGGNPRDNIR 262

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224092198|ref|XP_002309505.1| predicted protein [Populus trichocarpa] gi|222855481|gb|EEE93028.1| predicted protein [Populus trichocarpa]

 Score =  309 bits (791), Expect = 8e-82,   Method: Compositional matrix adjust.
 Identities = 158/263 (60%), Positives = 187/263 (71%), Gaps = 12/263 (4%)

Query: 1   MADKPSKALVLYGDGLARFVEPSHAHLHSLASKAACGFLSLPIAPPSESEEERIVREFAV 60
           MADK S+ LV+YGDGLA F+ PSHAHLHSLASKA CGFL+LP APPSESE+ERIVREFA 
Sbjct: 1   MADKASRGLVIYGDGLASFINPSHAHLHSLASKAFCGFLTLPNAPPSESEDERIVREFAY 60

Query: 61  LIDANQDYLSGIGEHTTELKWEEKSPFQTISDRFMGLKAALITTNSRLKSFGDKLGFATL 120
           L+DA + Y +              +   TIS+RFMG+KAA+IT N  LKSFG KLG    
Sbjct: 61  LLDACEAYQN------------VSTSIPTISERFMGMKAAIITNNPGLKSFGGKLGLTVF 108

Query: 121 QLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGAGEKTNDDKGK 180
             N+L     SLSGS  D V  ELLKLLG Q GK  E SQFDLV VH+GAGE+ N +  K
Sbjct: 109 PFNDLKGNEFSLSGSSTDFVTFELLKLLGFQEGKTLETSQFDLVFVHVGAGERVNAEGHK 168

Query: 181 AVAHDLEYINALVRVILQMAQPATEVGSRLHLSVVLSYGQVLEADNSNLSVLISIDEKSS 240
            +A D+EYI+ALV  I+++AQP +E+GSRLHLS+V+SYG V E D  +LS+L S DE   
Sbjct: 169 TIAIDVEYIDALVDGIMRIAQPGSEIGSRLHLSLVMSYGYVTEGDGRDLSILTSKDEMDP 228

Query: 241 DLSALFPRQSYTMKGETPRNDVR 263
            LS LFP QSYTMKGE PRND+R
Sbjct: 229 ALSKLFPLQSYTMKGEKPRNDIR 251

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356564061|ref|XP_003550275.1| PREDICTED: uncharacterized protein LOC100780200 [Glycine max]

 Score =  286 bits (733), Expect = 5e-75,   Method: Compositional matrix adjust.
 Identities = 148/263 (56%), Positives = 190/263 (72%), Gaps = 13/263 (4%)

Query: 1   MADKPSKALVLYGDGLARFVEPSHAHLHSLASKAACGFLSLPIAPPSESEEERIVREFAV 60
           MADKPS++LVL+GDGLAR ++ SH+H HSLAS ++CGFLSLP +PPSESE+ER VREFAV
Sbjct: 1   MADKPSRSLVLFGDGLARSIDSSHSHFHSLASLSSCGFLSLPNSPPSESEDERTVREFAV 60

Query: 61  LIDANQDYLSGIGEHTTELKWEEKSPFQTISDRFMGLKAALITTNSRLKSFGDKLGFATL 120
           L+DA   Y S +    ++   +E  P QT+ DRF+G+KAA++T NS LKSF  KLGF+ L
Sbjct: 61  LLDACHTY-SNMKGQISDRDNQEDPPKQTLPDRFIGMKAAILTNNSSLKSFSAKLGFSVL 119

Query: 121 QLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGAGEKTNDDKGK 180
           +L+EL+       G   +VVA ELLK LG + GK+ +   FDLV  HIGAGE+      K
Sbjct: 120 KLDELV------GGGSAEVVALELLKFLGFKEGKVLDSDHFDLVFFHIGAGEQ------K 167

Query: 181 AVAHDLEYINALVRVILQMAQPATEVGSRLHLSVVLSYGQVLEADNSNLSVLISIDEKSS 240
            VA D+ Y++ALV  ++  AQP +++ SRLHLSVV+SYG VLEAD+S  SVL  +DEK+S
Sbjct: 168 VVAADVGYMDALVGGVMSQAQPGSDISSRLHLSVVMSYGNVLEADDSKFSVLKRVDEKNS 227

Query: 241 DLSALFPRQSYTMKGETPRNDVR 263
            LS L+P QSYTMKG  PR DVR
Sbjct: 228 HLSMLYPLQSYTMKGGIPRKDVR 250

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255647370|gb|ACU24151.1| unknown [Glycine max]

 Score =  283 bits (725), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 147/263 (55%), Positives = 189/263 (71%), Gaps = 13/263 (4%)

Query: 1   MADKPSKALVLYGDGLARFVEPSHAHLHSLASKAACGFLSLPIAPPSESEEERIVREFAV 60
           MADKPS++LVL+GDGLAR ++ SH+H HSLAS ++CGFLSLP +PPSESE+ER VREFAV
Sbjct: 1   MADKPSRSLVLFGDGLARSIDSSHSHFHSLASLSSCGFLSLPNSPPSESEDERTVREFAV 60

Query: 61  LIDANQDYLSGIGEHTTELKWEEKSPFQTISDRFMGLKAALITTNSRLKSFGDKLGFATL 120
           L+DA   Y S +    ++   +E  P QT+ DRF+G+KAA++T NS LKSF  KLGF+ L
Sbjct: 61  LLDACHTY-SNMKGQISDRDNQEDPPKQTLPDRFIGMKAAILTNNSSLKSFSAKLGFSVL 119

Query: 121 QLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGAGEKTNDDKGK 180
           +L+EL+       G   +VVA ELLK LG + GK+ +   FDLV  HIGAGE+      K
Sbjct: 120 KLDELV------GGGSAEVVALELLKFLGFKEGKVLDSDHFDLVFFHIGAGEQ------K 167

Query: 181 AVAHDLEYINALVRVILQMAQPATEVGSRLHLSVVLSYGQVLEADNSNLSVLISIDEKSS 240
            VA D+ Y++ALV  ++  AQP +++ SRLHLSVV+SYG VLEAD+   SVL  +DEK+S
Sbjct: 168 VVAADVGYMDALVGGVMSQAQPGSDISSRLHLSVVMSYGNVLEADDFKFSVLKRVDEKNS 227

Query: 241 DLSALFPRQSYTMKGETPRNDVR 263
            LS L+P QSYTMKG  PR DVR
Sbjct: 228 HLSMLYPLQSYTMKGGIPRKDVR 250

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255550804|ref|XP_002516450.1| conserved hypothetical protein [Ricinus communis] gi|223544270|gb|EEF45791.1| conserved hypothetical protein [Ricinus communis]

 Score =  283 bits (725), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 148/263 (56%), Positives = 183/263 (69%), Gaps = 8/263 (3%)

Query: 1   MADKPSKALVLYGDGLARFVEPSHAHLHSLASKAACGFLSLPIAPPSESEEERIVREFAV 60
           MADKPS+ALVLYGDGLA+ ++ SH H+HSLASKA+CGFLSLP AP SESE ERIVREFA 
Sbjct: 1   MADKPSRALVLYGDGLAQLIDESHTHIHSLASKASCGFLSLPNAPSSESENERIVREFAH 60

Query: 61  LIDANQDYLSGIGEHTTELKWEEKSPFQTISDRFMGLKAALITTNSRLKSFGDKLGFATL 120
           L+DA   Y         E+  E+ +   TIS RFM +KAA+IT N  L+SFG KLGF  L
Sbjct: 61  LVDAYDAY--------QEMSNEKCTLIPTISQRFMEMKAAIITDNPSLQSFGSKLGFTVL 112

Query: 121 QLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGAGEKTNDDKGK 180
               L  T  S   S  + + SELLKLLG Q GK  E SQFDLV++H GA E  N D  +
Sbjct: 113 SFKCLNGTHKSHYESSFEDLTSELLKLLGFQEGKTIEASQFDLVILHTGASELLNSDSSE 172

Query: 181 AVAHDLEYINALVRVILQMAQPATEVGSRLHLSVVLSYGQVLEADNSNLSVLISIDEKSS 240
           A   D  Y+N++V+  +  A+P +E+GSRLHLS+V+SYG   + D++NLSVL+S DE +S
Sbjct: 173 ATECDAHYLNSMVKETMYNAKPGSEIGSRLHLSLVMSYGNASKIDSTNLSVLVSKDEMNS 232

Query: 241 DLSALFPRQSYTMKGETPRNDVR 263
           DLS L PRQSYTMKGE  R++VR
Sbjct: 233 DLSVLVPRQSYTMKGEKLRDNVR 255

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449450351|ref|XP_004142926.1| PREDICTED: uncharacterized protein LOC101217985 [Cucumis sativus]

 Score =  280 bits (717), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 142/263 (53%), Positives = 196/263 (74%), Gaps = 6/263 (2%)

Query: 1   MADKPSKALVLYGDGLARFVEPSHAHLHSLASKAACGFLSLPIAPPSESEEERIVREFAV 60
           MADKPS+AL ++GDGLARF++ SH++LH+LAS A+CGFLSLP APPSESEE+R++RE  +
Sbjct: 1   MADKPSRALAVFGDGLARFLDHSHSNLHALASLASCGFLSLPNAPPSESEEKRMIRELEL 60

Query: 61  LIDANQDYLSGIGEHTTELKWEEKSPFQTISDRFMGLKAALITTNSRLKSFGDKLGFATL 120
           L DA+   +S  G        E  S  ++I +RFMG++AAL+T NS ++S G +LG + L
Sbjct: 61  LFDASDSDVSKNGGGC-----EGSSQKKSIPERFMGMRAALLTNNSVVQSLGSELGISLL 115

Query: 121 QLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGAGEKTNDDKGK 180
           +L+EL++  + L   P+D +ASELLK LG Q GK+++ S+FDL+ VHIG G+K N +K +
Sbjct: 116 RLDELMQM-NHLGLPPVDFLASELLKRLGFQDGKIQDASEFDLLFVHIGVGDKVNGEKDR 174

Query: 181 AVAHDLEYINALVRVILQMAQPATEVGSRLHLSVVLSYGQVLEADNSNLSVLISIDEKSS 240
             + +++YI+ALV  ILQ  QP +E+GSRLHLS+++SYG V E D ++LSVL S   K+S
Sbjct: 175 TASDEMKYIDALVGDILQKTQPGSEIGSRLHLSLLMSYGDVFEDDENSLSVLTSNCGKNS 234

Query: 241 DLSALFPRQSYTMKGETPRNDVR 263
           DLS LFPRQSYTM GE  RND+R
Sbjct: 235 DLSVLFPRQSYTMMGEVQRNDIR 257

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356552344|ref|XP_003544528.1| PREDICTED: uncharacterized protein LOC100817041 [Glycine max]

 Score =  280 bits (716), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 147/263 (55%), Positives = 190/263 (72%), Gaps = 14/263 (5%)

Query: 1   MADKPSKALVLYGDGLARFVEPSHAHLHSLASKAACGFLSLPIAPPSESEEERIVREFAV 60
           MADKPS++LVL+GDGLARF++ SH+H HSLAS ++CGFLSLP +PPSESE+ER VRE AV
Sbjct: 1   MADKPSRSLVLFGDGLARFIDSSHSHFHSLASLSSCGFLSLPNSPPSESEDERTVREVAV 60

Query: 61  LIDANQDYLSGIGEHTTELKWEEKSPFQTISDRFMGLKAALITTNSRLKSFGDKLGFATL 120
           L+DA   YL+ +G+  ++   +E SP QT+ DRFMG+KAA++T NS LKSF  KLGF+ L
Sbjct: 61  LLDACPIYLN-MGK-ISDSDNQEDSPKQTLPDRFMGMKAAILTNNSSLKSFSAKLGFSVL 118

Query: 121 QLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGAGEKTNDDKGK 180
           +L+EL+       G   +VVA ELLKLLG Q GK+ +   FDLV  H GAGE+      K
Sbjct: 119 KLDELV------VGGSAEVVALELLKLLGFQEGKVLDSDHFDLVFFHNGAGEQ------K 166

Query: 181 AVAHDLEYINALVRVILQMAQPATEVGSRLHLSVVLSYGQVLEADNSNLSVLISIDEKSS 240
            VA D+ Y++ALV  ++   QP +++ SRLHLSVV+SYG +LE D+S  SV   +DEK+S
Sbjct: 167 VVAADMGYMDALVGGVMSQMQPGSDISSRLHLSVVVSYGNILEGDDSKFSVSKRVDEKNS 226

Query: 241 DLSALFPRQSYTMKGETPRNDVR 263
            LS L+P QSY MKG  PR DVR
Sbjct: 227 HLSVLYPLQSYAMKGGIPRKDVR 249

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449494427|ref|XP_004159543.1| PREDICTED: uncharacterized LOC101217985 [Cucumis sativus]

 Score =  280 bits (716), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 141/263 (53%), Positives = 196/263 (74%), Gaps = 6/263 (2%)

Query: 1   MADKPSKALVLYGDGLARFVEPSHAHLHSLASKAACGFLSLPIAPPSESEEERIVREFAV 60
           MADKPS+AL ++GDGLARF++ SH++LH+LAS A+CGFLSLP APPSESEE+R++RE  +
Sbjct: 1   MADKPSRALAVFGDGLARFLDQSHSNLHALASLASCGFLSLPNAPPSESEEKRMIRELEL 60

Query: 61  LIDANQDYLSGIGEHTTELKWEEKSPFQTISDRFMGLKAALITTNSRLKSFGDKLGFATL 120
           L DA+   ++  G        E  S  ++I +RFMG++AAL+T NS ++S G +LG + L
Sbjct: 61  LFDASDSDVNKNGGGC-----EGSSQKKSIPERFMGMRAALLTNNSVVQSLGSELGISLL 115

Query: 121 QLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGAGEKTNDDKGK 180
           +L+EL++  + L   P+D +ASELLK LG Q GK+++ S+FDL+ VHIG G+K N +K +
Sbjct: 116 RLDELMQM-NHLGLPPVDFLASELLKRLGFQDGKIQDASEFDLLFVHIGVGDKVNGEKDR 174

Query: 181 AVAHDLEYINALVRVILQMAQPATEVGSRLHLSVVLSYGQVLEADNSNLSVLISIDEKSS 240
             + +++YI+ALV  ILQ  QP +E+GSRLHLS+++SYG V E D ++LSVL S   K+S
Sbjct: 175 TASDEMKYIDALVGDILQKTQPGSEIGSRLHLSLLMSYGDVFEDDENSLSVLTSNCGKNS 234

Query: 241 DLSALFPRQSYTMKGETPRNDVR 263
           DLS LFPRQSYTM GE  RND+R
Sbjct: 235 DLSVLFPRQSYTMMGEVQRNDIR 257

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388507454|gb|AFK41793.1| unknown [Lotus japonicus]

 Score =  264 bits (675), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 145/264 (54%), Positives = 185/264 (70%), Gaps = 19/264 (7%)

Query: 1   MADKPSKALVLYGDGLARFVEPSHAHLHSLASKAACGFLSLPIAPPSESEEERIVREFAV 60
           MADKPS++LVL+GDGLAR ++PSH+HLHSLAS ++CGFLSLP +PPSESE++R VREFAV
Sbjct: 1   MADKPSRSLVLFGDGLARSIDPSHSHLHSLASLSSCGFLSLPNSPPSESEDQRTVREFAV 60

Query: 61  LIDANQDYLSGIGEHTTELKWEEKSP-FQTISDRFMGLKAALITTNSRLKSFGDKLGFAT 119
           L+DA       +    ++   ++ SP  QT+ DRFMG+KAA++T +S LKSF  KLGF  
Sbjct: 61  LLDA-----PNVNVQVSDDDSQKDSPEKQTLPDRFMGMKAAILTNHSGLKSFSSKLGFNV 115

Query: 120 LQLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGAGEKTNDDKG 179
           LQL+ L +  D+      DVVA ELLKLLG Q GK+++ + FDLV  HIGAGEK      
Sbjct: 116 LQLDALAKDYDA-GLHENDVVALELLKLLGFQEGKVQDSNNFDLVFFHIGAGEK------ 168

Query: 180 KAVAHDLEYINALVRVILQMAQPATEVGSRLHLSVVLSYGQVLEADNSNLSVLISIDEKS 239
                ++EYINALV  ++  AQP +++ SRLHLS+V+SYG+V E D S  SV    DEKS
Sbjct: 169 -----NVEYINALVGGLMNQAQPGSDISSRLHLSLVMSYGKVSEDDESKFSVSKRADEKS 223

Query: 240 SDLSALFPRQSYTMKGETPRNDVR 263
             LS L+P QSY MKG  PR DVR
Sbjct: 224 Y-LSLLYPLQSYAMKGGFPRKDVR 246

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357437483|ref|XP_003589017.1| hypothetical protein MTR_1g016410 [Medicago truncatula] gi|355478065|gb|AES59268.1| hypothetical protein MTR_1g016410 [Medicago truncatula] gi|388492878|gb|AFK34505.1| unknown [Medicago truncatula]

 Score =  254 bits (648), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 139/269 (51%), Positives = 187/269 (69%), Gaps = 27/269 (10%)

Query: 1   MADKPSKALVLYGDGLARFVEPS--HAHLHSLASKAACGFLSLPIAPPS----ESEEERI 54
           MADKPS++L+LYGDGLARF++PS  H +LHSLAS ++C FL+L  +  +    E+E++RI
Sbjct: 1   MADKPSRSLILYGDGLARFIDPSSSHTNLHSLASLSSCAFLTLSNSNSNFNPSETEDDRI 60

Query: 55  VREFAVLIDANQDYLSGIGEHTTELKWEEKSPFQTISDRFMGLKAALITTNSRLKSFGDK 114
           VREF +L+DA+Q +             +E    QT+ DRFMG+KAA++T +S LKSF  K
Sbjct: 61  VREFTLLLDASQIH-------------DE----QTLPDRFMGMKAAIMTNHSGLKSFSTK 103

Query: 115 LGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGAGEKT 174
           LGF+ +QL+ L++   S S    D+VA E+LKLLG Q GK+ + SQFDLV +H+GAGEK 
Sbjct: 104 LGFSVVQLDGLVKQHASESQDS-DIVAVEILKLLGFQEGKVLDNSQFDLVFIHVGAGEKD 162

Query: 175 NDDKGKAVAHDLEYINALVRVILQMAQPATEVGSRLHLSVVLSYGQVLEADNSNLSVLIS 234
           N  +  A   D+E+++ALV  I++ AQP ++VGSRLHLSVV+SYG+VLE D S  SV   
Sbjct: 163 NGSEQNA---DVEFVDALVGAIMRQAQPGSDVGSRLHLSVVMSYGKVLEDDESKFSVSKK 219

Query: 235 IDEKSSDLSALFPRQSYTMKGETPRNDVR 263
           +DEK S    L+P QSY MKG  PR DVR
Sbjct: 220 VDEKDSCFLTLYPLQSYAMKGGVPRKDVR 248

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	263
TAIR|locus:2181940	306	AT5G11810 "AT5G11810" [Arabido	0.939	0.807	0.465	1.9e-51

TAIR|locus:2181940 AT5G11810 "AT5G11810" [Arabidopsis thaliana (taxid:3702)]

 Score = 534 (193.0 bits), Expect = 1.9e-51, P = 1.9e-51
 Identities = 123/264 (46%), Positives = 166/264 (62%)

Query:     1 MADKPSKALVLYGDGLARFVEPXXXXXXXXXXXXXCGFLSLPIAPPSESEEERIVREFAV 60
             MADK S++L+LYGDGLARFV+P             CGFLSLP APP E+E ERIVREF+ 
Sbjct:     1 MADKSSRSLILYGDGLARFVDPSNTNIHSLASVATCGFLSLPNAPP-ETENERIVREFSH 59

Query:    61 LIDANQDYLSGIGEHTTELKWEEK-SPFQTISDRFMGLKAALITTNSRLKSFGDKLGFAT 119
             L+DA++ Y    G     LK +   +   T+++RFMGLKAAL+T +S L SFG  +G   
Sbjct:    60 LLDASEAYSIASG-----LKPKGNGNDISTLAERFMGLKAALVTDSSTLTSFGKLIGLDV 114

Query:   120 LQLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGAGEKTNDDKG 179
             LQL+E+ + SDS    P D  +S+LLKLLG + GK  +V+ +DLV VH G  E  N    
Sbjct:   115 LQLSEICQESDSF---PSDATSSKLLKLLGFEGGKCLDVNLYDLVFVHFGVDEYNN---- 167

Query:   180 KAVAHDLEYINALVRVILQMAQPATEVGSRLHLSVVLSYGQVLEADNSNLSVLISIDEKS 239
                 +++  +++L+  I+ MAQP +E+ SRLHLSVVLSYG V + D S   +    ++ +
Sbjct:   168 ---GNNMGILDSLIGSIMGMAQPGSEILSRLHLSVVLSYGSVTDKDVSVFPIKTPQEDIN 224

Query:   240 SDLSALFPRQSYTMKGETPRNDVR 263
                  L PRQSYTM+GE  R+DVR
Sbjct:   225 PAFIGLVPRQSYTMRGEKTRDDVR 248


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.315   0.133   0.364    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      263       250   0.00080  114 3  11 23  0.49    33
                                                     32  0.46    36


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  591 (63 KB)
  Total size of DFA:  160 KB (2096 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  22.98u 0.08s 23.06t   Elapsed:  00:00:23
  Total cpu time:  22.98u 0.08s 23.06t   Elapsed:  00:00:23
  Start:  Fri May 10 22:01:04 2013   End:  Fri May 10 22:01:27 2013

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0005829 "cytosol" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	263
COG3635	408	Predicted phosphoglycerate mutase, AP superfamily	99.94
PRK04024	412	cofactor-independent phosphoglycerate mutase; Prov	99.86
PRK04135	395	cofactor-independent phosphoglycerate mutase; Prov	99.83
PRK04200	395	cofactor-independent phosphoglycerate mutase; Prov	99.8
TIGR02535	396	hyp_Hser_kinase proposed homoserine kinase. The pr	99.79
TIGR00306	396	apgM 2,3-bisphosphoglycerate-independent phosphogl	99.79
PF01676	252	Metalloenzyme: Metalloenzyme superfamily; InterPro	99.48
PRK12383	406	putative mutase; Provisional	98.82
PRK05434	507	phosphoglyceromutase; Provisional	98.3
TIGR01696	381	deoB phosphopentomutase. This protein is involved	97.59
PLN02538	558	2,3-bisphosphoglycerate-independent phosphoglycera	97.53
PRK05362	394	phosphopentomutase; Provisional	97.35
TIGR01307	501	pgm_bpd_ind 2,3-bisphosphoglycerate-independent ph	96.64
cd00016	384	alkPPc Alkaline phosphatase homologues; alkaline p	93.84
KOG4513	531	consensus Phosphoglycerate mutase [Carbohydrate tr	84.68
COG0696	509	GpmI Phosphoglyceromutase [Carbohydrate transport	83.15

>COG3635 Predicted phosphoglycerate mutase, AP superfamily [Carbohydrate transport and metabolism]

Probab=99.94  E-value=9.6e-28  Score=228.60  Aligned_cols=102  Identities=21%  Similarity=0.334  Sum_probs=99.9

Q ss_pred             cCCCCCCchhhhccccceeeeecCchhhhhhhhcCceeeccCcccccCCCCCCCChhHHHHHHHHHhccccCcccccCcc
Q 024730           82 EEKSPFQTISDRFMGLKAALITTNSRLKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQF  161 (263)
Q Consensus        82 ~~~~~ipt~sERFmGmKAA~VTn~~likgfg~~lGf~V~~~~gl~g~~ds~~~~~~~~~a~~alkLLGf~eg~~~~~s~f  161 (263)
                      .+-|.+|+|+||| |||||||++++++||+|+.+||+|++++++||+.+|    +|++++++|+++|          ++|
T Consensus       233 g~~P~ip~F~e~y-glk~a~Ia~~~l~KGlar~~GmDvi~vegatG~~dt----n~~~k~k~a~eal----------~~y  297 (408)
T COG3635         233 GRYPKIPSFQERY-GLKGACIAAVPLIKGLARLVGMDVIEVEGATGYIDT----NYRGKAKAAIEAL----------KEY  297 (408)
T ss_pred             CCCCCCCCHhHhh-CcceEEEEecHHHHhHHHHhCCceeecccccCccCc----cHHHHHHHHHHHH----------hhC
Confidence            5668899999999 999999999999999999999999999999999999    9999999999999          999


Q ss_pred             cEEEEeeccCCccCcCCCcccccC-hHHHHHHHHHHHH
Q 024730          162 DLVLVHIGAGEKTNDDKGKAVAHD-LEYINALVRVILQ  198 (263)
Q Consensus       162 DlVFlHIka~d~ashdG~~~~K~d-IE~iD~lVG~Im~  198 (263)
                      ||||||||++|+++|||+++.|+. ||+||++++++++
T Consensus       298 Dfv~vhik~tDeagHdG~~e~Kv~~IE~iD~~i~pll~  335 (408)
T COG3635         298 DFVFVHIKATDEAGHDGDFEGKVRVIEDIDKAIGPLLD  335 (408)
T ss_pred             CEEEEEeccCccccCCCCHHHhHHHHHHHHHHhhhhhc
Confidence            999999999999999999999999 9999999999997

>PRK04024 cofactor-independent phosphoglycerate mutase; Provisional

Probab=99.86  E-value=3.2e-21  Score=184.27  Aligned_cols=105  Identities=20%  Similarity=0.355  Sum_probs=101.3

Q ss_pred             cCCCCCCchhhhccccceeeeecCchhhhhhhhcCceeeccCcccccCCCCCCCChhHHHHHHHHHhccccCcccccCcc
Q 024730           82 EEKSPFQTISDRFMGLKAALITTNSRLKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQF  161 (263)
Q Consensus        82 ~~~~~ipt~sERFmGmKAA~VTn~~likgfg~~lGf~V~~~~gl~g~~ds~~~~~~~~~a~~alkLLGf~eg~~~~~s~f  161 (263)
                      .+.|.+|+|.||| |||+|+|+++++++|+|+.+||+|+.++++||..+|    ++.+++++++++|          ++|
T Consensus       230 G~~p~lp~f~er~-gl~ga~is~~~l~kGLa~~~Gm~~~~vpg~tg~~~t----~~~~k~~~~~~~l----------~~~  294 (412)
T PRK04024        230 GEVPEIPKFTEKY-GLKAACVAGTALIKGIARMVGMDVITVEGATGGKDT----NYMAKAKAAVELL----------KEY  294 (412)
T ss_pred             CCCCCCCCHHHhc-CCceEEEeChHHHHHHHHHcCCceeccCCCcCCCCC----CHHHHHHHHHHHh----------ccC
Confidence            4578899999999 999999999999999999999999999999999999    9999999999999          689


Q ss_pred             cEEEEeeccCCccCcCCCcccccC-hHHHHHHHHHHHHhcC
Q 024730          162 DLVLVHIGAGEKTNDDKGKAVAHD-LEYINALVRVILQMAQ  201 (263)
Q Consensus       162 DlVFlHIka~d~ashdG~~~~K~d-IE~iD~lVG~Im~~a~  201 (263)
                      ||||+|++++|.++|+|+++.|+. ||+||+.++.|++..+
T Consensus       295 Dfv~vh~~~~D~~GH~gd~~~k~~aiE~iD~~l~~il~~l~  335 (412)
T PRK04024        295 DFVLLNIKGTDEAGHDGDFEGKVEVIEKIDKMLGYILDNLD  335 (412)
T ss_pred             CEEEEeccCcchhhcCCCHHHHHHHHHHHHHHHHHHHHHhh
Confidence            999999999999999999999999 9999999999998874

>PRK04135 cofactor-independent phosphoglycerate mutase; Provisional

Probab=99.83  E-value=8.4e-21  Score=181.45  Aligned_cols=96  Identities=19%  Similarity=0.343  Sum_probs=91.4

Q ss_pred             ccCCCCCCchhhhccccceeeeecCchhhhhhhhcCceeeccCcccccCCCCCCCChhHHHHHHHHHhccccCcccccCc
Q 024730           81 WEEKSPFQTISDRFMGLKAALITTNSRLKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQ  160 (263)
Q Consensus        81 ~~~~~~ipt~sERFmGmKAA~VTn~~likgfg~~lGf~V~~~~gl~g~~ds~~~~~~~~~a~~alkLLGf~eg~~~~~s~  160 (263)
                      ..+.|.+|+|+||| |||+|+|+++++++|+|+.+||+|+. +|+          ++.+++++++++|          ++
T Consensus       222 ~G~~p~lp~F~e~~-Glkga~Ia~~~l~kGi~~~~Gm~~i~-~ga----------~~~~k~~~a~~~l----------~~  279 (395)
T PRK04135        222 FSKKPDFPSFEEVY-KLKAAAIASYPMYRGLAKLVGMDVLP-TGQ----------TLEDEIKTLKENW----------ND  279 (395)
T ss_pred             CCCCCCCCCHHHHh-CCceEEEehhHHHHHHHHHcCCeecC-CCC----------CHHHHHHHHHHHH----------hc
Confidence            36778999999999 99999999999999999999999999 875          8999999999999          89


Q ss_pred             ccEEEEeeccCCccCcCCCcccccC-hHHHHHHHHHHHH
Q 024730          161 FDLVLVHIGAGEKTNDDKGKAVAHD-LEYINALVRVILQ  198 (263)
Q Consensus       161 fDlVFlHIka~d~ashdG~~~~K~d-IE~iD~lVG~Im~  198 (263)
                      |||||+|++++|+++|+|+++.|++ ||+||+.+.++++
T Consensus       280 ~DfV~vhvk~~DeaGH~gd~~~Kv~~IE~iD~~l~~ll~  318 (395)
T PRK04135        280 YDFFFLHVKKTDSYGEDGNFEEKVKVIEEVDALLPEILA  318 (395)
T ss_pred             CCEEEEEeccCchhhccCCHHHHHHHHHHHHHHHHHHhc
Confidence            9999999999999999999999999 9999999999883

>PRK04200 cofactor-independent phosphoglycerate mutase; Provisional

Probab=99.80  E-value=5e-20  Score=175.00  Aligned_cols=104  Identities=22%  Similarity=0.324  Sum_probs=99.0

Q ss_pred             cCCCCCCchhhhccccceeeeecCchhhhhhhhcCceeeccCcccccCCCCCCCChhHHHHHHHHHhccccCcccccCcc
Q 024730           82 EEKSPFQTISDRFMGLKAALITTNSRLKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQF  161 (263)
Q Consensus        82 ~~~~~ipt~sERFmGmKAA~VTn~~likgfg~~lGf~V~~~~gl~g~~ds~~~~~~~~~a~~alkLLGf~eg~~~~~s~f  161 (263)
                      .+.|.+|+|.||| |||+|+|+++++++|+|+.+||+|+.++++||..+|    +|.+|+++++++|          ++|
T Consensus       220 G~~p~~p~f~e~~-gl~~a~ia~~~l~kGla~~~Gm~~~~vpgatg~~dt----~~~~k~~~a~~~l----------~~~  284 (395)
T PRK04200        220 GYAPKMPSFKEKY-GLKGAVISAVDLLKGIGIYAGLDVIEVPGATGYLDT----NYEGKAEAALEAL----------KTH  284 (395)
T ss_pred             CCCCCCCCHHHhc-CCceEEEeccHHHHHHHHHcCCccccCCCccccccc----chHHHHHHHHHHh----------ccC
Confidence            4578899999999 999999999999999999999999999999999999    9999999999999          789


Q ss_pred             cEEEEeeccCCccCcCCCcccccC-hHHHHHH-HHHHHHhc
Q 024730          162 DLVLVHIGAGEKTNDDKGKAVAHD-LEYINAL-VRVILQMA  200 (263)
Q Consensus       162 DlVFlHIka~d~ashdG~~~~K~d-IE~iD~l-VG~Im~~a  200 (263)
                      ||||+|++++|.++|+|+++.|++ ||.||+. +++++++-
T Consensus       285 DfV~vh~~~~D~aGH~gd~~~kv~aiE~lD~~~~~~ll~al  325 (395)
T PRK04200        285 DFVFVHVEAPDEAGHEGDLEAKIKAIEDIDERVVGPILEAL  325 (395)
T ss_pred             CEEEEEecCcchhhccCCHHHHHHHHHHHHHHhHHHHHHHH
Confidence            999999999999999999999999 9999997 56788775

>TIGR02535 hyp_Hser_kinase proposed homoserine kinase

Probab=99.79  E-value=1.7e-19  Score=171.46  Aligned_cols=105  Identities=21%  Similarity=0.364  Sum_probs=99.4

Q ss_pred             cCCCCCCchhhhccccceeeeecCchhhhhhhhcCceeeccCcccccCCCCCCCChhHHHHHHHHHhccccCcccccCcc
Q 024730           82 EEKSPFQTISDRFMGLKAALITTNSRLKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQF  161 (263)
Q Consensus        82 ~~~~~ipt~sERFmGmKAA~VTn~~likgfg~~lGf~V~~~~gl~g~~ds~~~~~~~~~a~~alkLLGf~eg~~~~~s~f  161 (263)
                      .+.|.+|+|.||| |+|+|+|++.++++|+|+.+||+|+.+++++|..+|    +|.+|+++++++|          ++|
T Consensus       221 G~~p~~p~f~e~~-gl~~a~ia~~~l~kGla~~~Gm~~~~vpgatg~~dt----~~~~k~~~~~~~l----------~~~  285 (396)
T TIGR02535       221 GGAPKMPTFSERY-GIRGAMISAVDLLKGIGIYAGLERIEVEGATGYLDT----NYEGKVRAALEAL----------ETY  285 (396)
T ss_pred             CCCCCCCCHHHhc-CCceEEEeccHHHHHHHHHcCCccccCCcccccccc----chHHHHHHHHHHH----------hhC
Confidence            4578899999999 999999999999999999999999999999999999    9999999999999          789


Q ss_pred             cEEEEeeccCCccCcCCCcccccC-hHHHHHH-HHHHHHhcC
Q 024730          162 DLVLVHIGAGEKTNDDKGKAVAHD-LEYINAL-VRVILQMAQ  201 (263)
Q Consensus       162 DlVFlHIka~d~ashdG~~~~K~d-IE~iD~l-VG~Im~~a~  201 (263)
                      ||||||++++|.++|+|+++.|++ ||.||+. +++++++.+
T Consensus       286 Dfv~vh~~~~D~aGH~gd~~~kv~aIE~lD~~~~~~ll~al~  327 (396)
T TIGR02535       286 DFVVVHVEAPDEAGHEGDLEAKIKAIELIDSRIVGPLLEALS  327 (396)
T ss_pred             CEEEEEeCCCChhhccCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999 9999996 568998763

The proposal that this family encodes a kinase is based on analogy to phosphomutases which are intramolecular phosphotransferases. A mutase active site could evolve to bring together homoserine and a phosphate donor such as phosphoenolpyruvate resulting in a kinase activity.

>TIGR00306 apgM 2,3-bisphosphoglycerate-independent phosphoglycerate mutase, archaeal form

Probab=99.79  E-value=1.5e-19  Score=172.07  Aligned_cols=105  Identities=18%  Similarity=0.320  Sum_probs=100.2

Q ss_pred             cCCCCCCchhhhccccceeeeecCchhhhhhhhcCceeeccCcccccCCCCCCCChhHHHHHHHHHhccccCcccccCcc
Q 024730           82 EEKSPFQTISDRFMGLKAALITTNSRLKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQF  161 (263)
Q Consensus        82 ~~~~~ipt~sERFmGmKAA~VTn~~likgfg~~lGf~V~~~~gl~g~~ds~~~~~~~~~a~~alkLLGf~eg~~~~~s~f  161 (263)
                      .+.|.+|+|+||| |+|+|+|++.++++|+|+.+||+|+.++++||..+|    +|.+|+++++++|          ++|
T Consensus       224 G~~p~l~~f~er~-gl~~a~ia~~~l~kGLa~~~Gm~~~~v~gatg~~dt----~~~~k~~~~~~~l----------~~y  288 (396)
T TIGR00306       224 GRMPRVESFKERY-GLRGAMIAEVDLIKGLARLIGMDVIRVEGATGGIDT----DYRGKVRALILAL----------EEY  288 (396)
T ss_pred             CCCCCCCCHHHhc-CCceEEEechHHHHHHHHHcCCeeecCCcccccccc----cHHHHHHHHHHHh----------hcC
Confidence            4578899999999 999999999999999999999999999999999999    9999999999999          789


Q ss_pred             cEEEEeeccCCccCcCCCcccccC-hHHHHHHHHHHHHhcC
Q 024730          162 DLVLVHIGAGEKTNDDKGKAVAHD-LEYINALVRVILQMAQ  201 (263)
Q Consensus       162 DlVFlHIka~d~ashdG~~~~K~d-IE~iD~lVG~Im~~a~  201 (263)
                      ||||+|++++|.++|+|+++.|++ ||++|+.++.++++.+
T Consensus       289 Dfv~v~~~~~D~aGH~gd~~~k~~aIE~iD~~l~~~l~~l~  329 (396)
T TIGR00306       289 DFVLVHTKGPDEAGHDGDPELKVRAIEKIDSKIVGPLLALD  329 (396)
T ss_pred             CEEEEEecCCChhhhcCCHHHHHHHHHHHHHHHHHHHHHhh
Confidence            999999999999999999999999 9999999997787753

This model describes a set of proteins in the Archaea (two each in Methanococcus jannaschii, Methanobacterium thermoautotrophicum, and Archaeoglobus fulgidus) and in Aquifex aeolicus (1 member).

>PF01676 Metalloenzyme: Metalloenzyme superfamily; InterPro: IPR006124 This domain unites alkaline phosphatase, N-acetylgalactosamine-4-sulphatase, and cerebroside sulphatase, enzymes with known three-dimensional structures, with phosphopentomutase, 2,3-bisphosphoglycerate-independent phosphoglycerate mutase, phosphoglycerol transferase, phosphonate monoesterase, streptomycin-6-phosphate phosphatase, alkaline phosphodiesterase/nucleotide pyrophosphatase PC-1, and several closely related sulphatases

Probab=99.48  E-value=6.1e-14  Score=124.43  Aligned_cols=180  Identities=18%  Similarity=0.313  Sum_probs=130.9

Q ss_pred             ceEEEecCCcccccCC--------Cccchhhhhh------cccccc-eecCCCCCCCchhhHHHHHHHHHhhhhcccccC
Q 024730            7 KALVLYGDGLARFVEP--------SHAHLHSLAS------KAACGF-LSLPIAPPSESEEERIVREFAVLIDANQDYLSG   71 (263)
Q Consensus         7 R~LVlygdG~a~~v~p--------~h~hlhslAs------~~sCgF-Lsl~~sp~~~~~~~r~v~E~a~LlD~~d~~~~~   71 (263)
                      |.++|--||+.--=.+        ..-+|+.||.      .+.||- +.||   + ..-...   |.+++-=....    
T Consensus         2 r~ilivlDG~G~g~~~~~t~l~~a~tptld~la~~~p~~~~~~~G~~~~lp---~-g~~g~S---~~~~~~~~~~~----   70 (252)
T PF01676_consen    2 RVILIVLDGLGDGPMPDATPLEDAGTPTLDHLAAAYPHALLGASGLMVGLP---P-GQLGGS---DVGHLAIFRGA----   70 (252)
T ss_dssp             EEEEEEETTBC-SCBTTTGHHHHSTEHHHHHHHHHSCEEEEBESGGGGTSS---T-TCHTHH---HHHHHHHEECE----
T ss_pred             cEEEEEeccCCCCCCCCcChHhhcCCcHHHHHHHhhcccccccccCcccCC---C-CCcCCc---ccccccccccc----
Confidence            6778877887643333        2557899999      888885 5553   2 112222   22332111011    


Q ss_pred             CCCccccccccCCCCCC-chhhhccccceeeeecCchhhhhhhhcC-ceeeccCcccccCCCCCCCChhHH--HHHHHHH
Q 024730           72 IGEHTTELKWEEKSPFQ-TISDRFMGLKAALITTNSRLKSFGDKLG-FATLQLNELIETSDSLSGSPIDVV--ASELLKL  147 (263)
Q Consensus        72 ~~~~~~~~~~~~~~~ip-t~sERFmGmKAA~VTn~~likgfg~~lG-f~V~~~~gl~g~~ds~~~~~~~~~--a~~alkL  147 (263)
                                .+-+.+| ++.+++ |++++.|+.+..+.++++.+| +.|...+++++..++    ++..+  ++++++.
T Consensus        71 ----------~~~~~~~~~~~~~~-~l~~~~ia~~~~~~~i~~~~~g~~v~~~~g~t~~~~~----~~~~~~~~~~~~~~  135 (252)
T PF01676_consen   71 ----------GDYPNLPPSFTEKY-GLKGAGIAETPKIGGIADFFGGMDVISVEGATGDVDP----DMSAKEIAEAAIEA  135 (252)
T ss_dssp             ----------EEEES-HHHHHHHC-THHEEEEEECHHHHHHHHHTTTEEEE--STSSCCGST----TTTHHHHHHHHHHH
T ss_pred             ----------ccccccccceeecc-CceecceecccccceeHHHhCCccccccccccccccc----chhhHHHHHHHHHh
Confidence                      2233366 999999 999999999999999999999 999999999998888    65444  8999999


Q ss_pred             hccccCcccccCcccEEEEeeccCCccCcCCCcccccC-hHHHHHHHHHHHHhc-CCcccccceeEEEEEEecccccccC
Q 024730          148 LGLQRGKMEEVSQFDLVLVHIGAGEKTNDDKGKAVAHD-LEYINALVRVILQMA-QPATEVGSRLHLSVVLSYGQVLEAD  225 (263)
Q Consensus       148 LGf~eg~~~~~s~fDlVFlHIka~d~ashdG~~~~K~d-IE~iD~lVG~Im~~a-~~gs~i~srlhlsvvlsYG~~~~~~  225 (263)
                      |        +..+|||||+|++.+|.++|+|+++.+.+ ||++|+.|+++++.. +++      .-|.|.=-.|+...-.
T Consensus       136 l--------~~~~~~~v~~~~~~~D~~GH~~~~~~~~~~ie~~D~~l~~l~~~~~~~~------~~liiTaDHg~~~~~~  201 (252)
T PF01676_consen  136 L--------KKDKYDFVFVHVKGTDEAGHRGDPEAYIEAIERIDRFLGRLLEALDKED------DLLIITADHGNDETMG  201 (252)
T ss_dssp             H--------HHTTSSEEEEEEEHHHHHHTTT-HHHHHHHHHHHHHHHHHHHHHHHHTT------EEEEEEESSBSTTTSB
T ss_pred             h--------hcccCCeEEEeecCcchhhccCCHHHHHHHHHHHHHHHHHHHHHHhcCC------CEEEEECCCCCccccC
Confidence            9        66889999999999999999999999999 999999999999986 433      3455555677665544


Q ss_pred             C
Q 024730          226 N  226 (263)
Q Consensus       226 ~  226 (263)
                      .
T Consensus       202 ~  202 (252)
T PF01676_consen  202 H  202 (252)
T ss_dssp             S
T ss_pred             C
Confidence            3

This domain is also related to alkaline phosphatase IPR001952 from INTERPRO []. The most conserved residues are probably involved in metal binding and catalysis.; GO: 0003824 catalytic activity, 0046872 metal ion binding; PDB: 1EQJ_A 1EJJ_A 1O99_A 1O98_A 3UN5_F 3UN3_B 3M8Y_C 3UO0_B 3UN2_B 3UNY_E ....

>PRK12383 putative mutase; Provisional

Probab=98.82  E-value=6.9e-09  Score=100.39  Aligned_cols=99  Identities=11%  Similarity=0.088  Sum_probs=83.7

Q ss_pred             ccCCCCCCchhhhccccceeeeecCchhhhhhhhcCceeeccCcccccCCCCCCCChhHHHHHHHHHhccccCcccccCc
Q 024730           81 WEEKSPFQTISDRFMGLKAALITTNSRLKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQ  160 (263)
Q Consensus        81 ~~~~~~ipt~sERFmGmKAA~VTn~~likgfg~~lGf~V~~~~gl~g~~ds~~~~~~~~~a~~alkLLGf~eg~~~~~s~  160 (263)
                      +|. +.+|+|.+++ |+++++|         |+..  +++..++.++.....   +.+.++.+++++|        +...
T Consensus       231 ~p~-~~v~~~l~~~-G~~v~~V---------GKi~--Di~s~~G~t~~~~~~---~t~~~~~~~l~aL--------~~~~  286 (406)
T PRK12383        231 DPK-VQVPQKLYEA-GVPVVLV---------GKVA--DIVNNPYGVSWQNLV---DTQRVMDITLDEF--------NTHP  286 (406)
T ss_pred             CCc-chhhhHHHHc-CCCEEEE---------EEhH--HeeccCCcccccccC---CHHHHHHHHHHHH--------hcCC
Confidence            344 7799999999 9999999         4444  888888888855542   5669999999999        2234


Q ss_pred             ccEEEEeeccCCccCcCCCcccccC-hHHHHHHHHHHHHhcCCc
Q 024730          161 FDLVLVHIGAGEKTNDDKGKAVAHD-LEYINALVRVILQMAQPA  203 (263)
Q Consensus       161 fDlVFlHIka~d~ashdG~~~~K~d-IE~iD~lVG~Im~~a~~g  203 (263)
                      +||||+|++..|.++|+++.+.+.. ||++|+.++.+|+.-+++
T Consensus       287 ~dlvfvnl~~~D~~GH~~d~~~y~~aiE~iD~~lg~ll~~L~~~  330 (406)
T PRK12383        287 TAFICTNIQETDLAGHAEDVARYAERLEVVDRNLARLLEAMTPD  330 (406)
T ss_pred             CCEEEEeccCCccccccCCHHHHHHHHHHHHHHHHHHHHHhccC
Confidence            8999999999999999999999999 999999999999987753

>PRK05434 phosphoglyceromutase; Provisional

Probab=98.30  E-value=1.2e-06  Score=86.97  Aligned_cols=86  Identities=13%  Similarity=0.255  Sum_probs=72.6

Q ss_pred             CCCCCCchhhhccccceeeeecCchhhhhhhhcCceeeccCcccccCCCCCCCChhHHHHHHHHHhccccCcccccCccc
Q 024730           83 EKSPFQTISDRFMGLKAALITTNSRLKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFD  162 (263)
Q Consensus        83 ~~~~ipt~sERFmGmKAA~VTn~~likgfg~~lGf~V~~~~gl~g~~ds~~~~~~~~~a~~alkLLGf~eg~~~~~s~fD  162 (263)
                      .++.+|. .||+ +++++.|+..++.      .+|                  +...++.++++.|        +..+||
T Consensus       344 ~~~~~~~-e~r~-~~~s~~va~yd~~------p~M------------------s~~e~~d~~i~~l--------~~~~~D  389 (507)
T PRK05434        344 REEPFPG-EDRI-LIPSPKVATYDLK------PEM------------------SAYEVTDKLVEAI--------ESGKYD  389 (507)
T ss_pred             cCCCCCC-ceee-ecCCceeecccCC------CCC------------------cHHHHHHHHHHHH--------hccCCC
Confidence            4667899 9999 9999998877765      222                  4556899999999        235799


Q ss_pred             EEEEeeccCCccCcCCCcccccC-hHHHHHHHHHHHHhcCC
Q 024730          163 LVLVHIGAGEKTNDDKGKAVAHD-LEYINALVRVILQMAQP  202 (263)
Q Consensus       163 lVFlHIka~d~ashdG~~~~K~d-IE~iD~lVG~Im~~a~~  202 (263)
                      |||||+..+|.++|+|+++.+.. ||.+|+.||+|++..+.
T Consensus       390 fv~vnf~~~D~vGHtg~~~a~~~AIe~vD~~LGrll~aLk~  430 (507)
T PRK05434        390 FIILNFANPDMVGHTGNLEAAVKAVEAVDECLGRVVDAVLK  430 (507)
T ss_pred             EEEEEecCcchhhcCCCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            99999999999999999999999 99999999999998643

>TIGR01696 deoB phosphopentomutase

Probab=97.59  E-value=0.00015  Score=70.15  Aligned_cols=75  Identities=5%  Similarity=-0.004  Sum_probs=60.1

Q ss_pred             eeeccCcccccCCCCCCCChhHHHHHHHHHhccccCcccccCcccEEEEeeccCCc-cCcCCCcccccC-hHHHHHHHHH
Q 024730          118 ATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGAGEK-TNDDKGKAVAHD-LEYINALVRV  195 (263)
Q Consensus       118 ~V~~~~gl~g~~ds~~~~~~~~~a~~alkLLGf~eg~~~~~s~fDlVFlHIka~d~-ashdG~~~~K~d-IE~iD~lVG~  195 (263)
                      |+|.-.|++....+   .+.+..+++++++|        +...+||||+|++..|. ++|.++...+.. +|++|+.|+.
T Consensus       238 DiF~g~Glt~a~~~---~~~~~~~~~~l~aL--------~~~~~~lif~nl~d~D~~~GH~~d~~~y~~ale~vD~~Lg~  306 (381)
T TIGR01696       238 DIYDGEGITKKVRT---TSNMDGMDATIKEM--------KEDFTGISFTNLVDFDALWGHRRDVAGYAAALELFDRRLPE  306 (381)
T ss_pred             hEecCCCcccccCC---CCHHHHHHHHHHHH--------hcCCCCEEEEEeCCCccccCCCCCHHHHHHHHHHHHHHHHH
Confidence            34555566554433   36788899999999        22348999999999995 799999999999 9999999999


Q ss_pred             HHHhcCCc
Q 024730          196 ILQMAQPA  203 (263)
Q Consensus       196 Im~~a~~g  203 (263)
                      +++.-+++
T Consensus       307 ll~~L~~~  314 (381)
T TIGR01696       307 LFSLLRED  314 (381)
T ss_pred             HHHHhccC
Confidence            99998754

This protein is involved in the purine and pyrimidine salvage pathway. It catalyzes the conversion of D-ribose 1-phosphate to D-ribose 5-phosphate and the conversion of 2-deoxy-D-ribose 1-phosphate to 2-deoxy-D-ribose 5-phosphate. The seed members of this protein are characterized deoB proteins from E.Coli and Bacillus. This model matches pfam01676 for Metalloenzyme superfamily.

>PLN02538 2,3-bisphosphoglycerate-independent phosphoglycerate mutase

Probab=97.53  E-value=0.00014  Score=73.62  Aligned_cols=74  Identities=19%  Similarity=0.154  Sum_probs=62.3

Q ss_pred             CCChhHHHHHHHHHhccccCcccccCcccEEEEeeccCCccCcCCCcccccC-hHHHHHHHHHHHHhcC-CcccccceeE
Q 024730          134 GSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGAGEKTNDDKGKAVAHD-LEYINALVRVILQMAQ-PATEVGSRLH  211 (263)
Q Consensus       134 ~~~~~~~a~~alkLLGf~eg~~~~~s~fDlVFlHIka~d~ashdG~~~~K~d-IE~iD~lVG~Im~~a~-~gs~i~srlh  211 (263)
                      .-+...++.++++.+        ...+|||||+|+..+|.++|.|+++.++. ||++|+.+++|+++.+ .|      -.
T Consensus       402 eMSA~eVtd~~i~~i--------~~~~ydfi~vNfan~DmvGHtG~~ea~ikAIE~vD~~Lg~Il~al~~~g------~~  467 (558)
T PLN02538        402 KMKALEIAEKARDAL--------LSGKFDQVRVNLANGDMVGHTGDLEATIVACEAVDAAVKEILDAVEQVG------GI  467 (558)
T ss_pred             CCCHHHHHHHHHHHH--------hcCCCCEEEEeccCcccccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcC------CE
Confidence            345667889999999        45679999999999999999999999999 9999999999999863 24      34


Q ss_pred             EEEEEecccc
Q 024730          212 LSVVLSYGQV  221 (263)
Q Consensus       212 lsvvlsYG~~  221 (263)
                      |.|.--.||+
T Consensus       468 liITADHGNa  477 (558)
T PLN02538        468 YLVTADHGNA  477 (558)
T ss_pred             EEEeCCCCCc
Confidence            5666678877

>PRK05362 phosphopentomutase; Provisional

Probab=97.35  E-value=0.00061  Score=66.17  Aligned_cols=59  Identities=12%  Similarity=0.039  Sum_probs=52.9

Q ss_pred             ChhHHHHHHHHHhccccCcccc-cCcccEEEEeeccCCc-cCcCCCcccccC-hHHHHHHHHHHHHhcCC
Q 024730          136 PIDVVASELLKLLGLQRGKMEE-VSQFDLVLVHIGAGEK-TNDDKGKAVAHD-LEYINALVRVILQMAQP  202 (263)
Q Consensus       136 ~~~~~a~~alkLLGf~eg~~~~-~s~fDlVFlHIka~d~-ashdG~~~~K~d-IE~iD~lVG~Im~~a~~  202 (263)
                      +....+.++++.|        + ..++||||+|+...|. .+|.++...+.. +|++|+.|+.|++..++
T Consensus       260 ~~~~~~~~ale~L--------~~~~~~~fvfvn~~~~D~~~GH~~~~~~y~~ale~~D~~lg~ll~~L~~  321 (394)
T PRK05362        260 SNMDGMDATIEEM--------KEAGDNGLVFTNLVDFDSLYGHRRDVAGYAAALEEFDARLPELLAALKE  321 (394)
T ss_pred             CHHHHHHHHHHHH--------HhCCCCcEEEEecccCccccCCcCCHHHHHHHHHHHHHHHHHHHHHhcc
Confidence            6788999999999        2 3468999999999998 599999999999 99999999999999865

>TIGR01307 pgm_bpd_ind 2,3-bisphosphoglycerate-independent phosphoglycerate mutase

Probab=96.64  E-value=0.0039  Score=62.53  Aligned_cols=60  Identities=15%  Similarity=0.278  Sum_probs=52.6

Q ss_pred             CChhHHHHHHHHHhccccCcccccCcccEEEEeeccCCccCcCCCcccccC-hHHHHHHHHHHHHhcCC
Q 024730          135 SPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGAGEKTNDDKGKAVAHD-LEYINALVRVILQMAQP  202 (263)
Q Consensus       135 ~~~~~~a~~alkLLGf~eg~~~~~s~fDlVFlHIka~d~ashdG~~~~K~d-IE~iD~lVG~Im~~a~~  202 (263)
                      -....++.++++.+        +..+|||||+|...+|-.+|.|+.+...+ ||.+|+.||+|++..+.
T Consensus       364 Msa~evtd~~i~~I--------~~~k~dfi~vnfan~DmvGHtg~~~a~v~AIE~vD~~LGrIl~aLke  424 (501)
T TIGR01307       364 MSAKAVTDAVLEAI--------AQGKFDLIVVNFANPDMVGHTGNFEAAIKAVEALDVCLGRIVEACKK  424 (501)
T ss_pred             cCHHHHHHHHHHHH--------hccCCCEEEEECCCcccccCCCCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            35667888999998        34569999999999999999999998888 99999999999999753

This protein is about double in length of, and devoid of homology to the form of phosphoglycerate mutase that uses 2,3-bisphosphoglycerate as a cofactor.

>cd00016 alkPPc Alkaline phosphatase homologues; alkaline phosphatases are non-specific phosphomonoesterases that catalyze the hydrolysis reaction via a phosphoseryl intermediate to produce inorganic phosphate and the corresponding alcohol, optimally at high pH

Probab=93.84  E-value=0.12  Score=49.88  Aligned_cols=59  Identities=10%  Similarity=0.132  Sum_probs=50.3

Q ss_pred             CCChhHHHHHHHHHhccccCcccccCcccEEEEeecc--CCccCcCCCcccccC-hHHHHHHHHHHHHhcC
Q 024730          134 GSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGA--GEKTNDDKGKAVAHD-LEYINALVRVILQMAQ  201 (263)
Q Consensus       134 ~~~~~~~a~~alkLLGf~eg~~~~~s~fDlVFlHIka--~d~ashdG~~~~K~d-IE~iD~lVG~Im~~a~  201 (263)
                      .++...++++++++|-         +..+-.||||..  .|.++|.++...+.+ ++.+|+.|+.+++..+
T Consensus       230 ~psL~emt~~al~~L~---------~~~~gFfl~ve~~~iD~~gH~~d~~~~~~~l~~~D~av~~~l~~l~  291 (384)
T cd00016         230 EPSLAEMTEKAIDVLS---------KNPNGFFLMVEGGRIDHAHHANDAAGALSETLAFDDAVEAALDFAK  291 (384)
T ss_pred             CCCHHHHHHHHHHHHH---------hcCCcEEEEEeCCCCCcccCCCcHHHHHHHHHHHHHHHHHHHHHhh
Confidence            4688999999999991         234777777776  899999999999999 9999999999999875

Alkaline phosphatase exists as a dimer, each monomer binding 2 zinc atoms and one magnesium atom, which are essential for enzymatic activity.

>KOG4513 consensus Phosphoglycerate mutase [Carbohydrate transport and metabolism]

Probab=84.68  E-value=1.7  Score=43.77  Aligned_cols=79  Identities=14%  Similarity=0.079  Sum_probs=63.4

Q ss_pred             ChhHHHHHHHHHhccccCcccccCcccEEEEeeccCCccCcCCCcccccC-hHHHHHHHHHHHHhcCCcccccceeEEEE
Q 024730          136 PIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGAGEKTNDDKGKAVAHD-LEYINALVRVILQMAQPATEVGSRLHLSV  214 (263)
Q Consensus       136 ~~~~~a~~alkLLGf~eg~~~~~s~fDlVFlHIka~d~ashdG~~~~K~d-IE~iD~lVG~Im~~a~~gs~i~srlhlsv  214 (263)
                      ....+|.++...+        +...||+|-+++..+|-.+|-|+++..+. .|--|..||.|.++-+-     -+--|+|
T Consensus       388 ~a~eva~ka~~~i--------e~G~~p~v~vNlappDMVGHTG~~EAtv~AcEatD~aig~Iy~A~~~-----~~y~lvv  454 (531)
T KOG4513|consen  388 KALEVAEKARDAI--------ESGKFPQVRVNLAPPDMVGHTGDIEATVVACEATDEAIGKIYDAIEQ-----VGYILVV  454 (531)
T ss_pred             hHHHHHHHHHHHH--------HcCCCCeEEEcCCCccccCcccchhhhhhHHHHHHHHHHHHHHHHHh-----cCcEEEE
Confidence            3456777888877        66789999999999999999999999888 99999999999998432     2344667


Q ss_pred             EEecccccccCCC
Q 024730          215 VLSYGQVLEADNS  227 (263)
Q Consensus       215 vlsYG~~~~~~~~  227 (263)
                      .---|||-+-...
T Consensus       455 TADHGNAEkMv~~  467 (531)
T KOG4513|consen  455 TADHGNAEKMVKR  467 (531)
T ss_pred             EcCCCCHHHhccC
Confidence            7778888765443

>COG0696 GpmI Phosphoglyceromutase [Carbohydrate transport and metabolism]

Probab=83.15  E-value=2.5  Score=43.15  Aligned_cols=87  Identities=13%  Similarity=0.177  Sum_probs=66.9

Q ss_pred             ccCCCCCCCChhHHHHHHHHHhccccCcccccCcccEEEEeeccCCccCcCCCcccccC-hHHHHHHHHHHHHhcCCccc
Q 024730          127 ETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGAGEKTNDDKGKAVAHD-LEYINALVRVILQMAQPATE  205 (263)
Q Consensus       127 g~~ds~~~~~~~~~a~~alkLLGf~eg~~~~~s~fDlVFlHIka~d~ashdG~~~~K~d-IE~iD~lVG~Im~~a~~gs~  205 (263)
                      .++|.--+-..-.+.+++++.+        +...||++.|+-.-.|-.+|-|+++..++ +|-.|+-||+|.+..     
T Consensus       363 aTYDl~PEMSa~evtd~~~~~i--------~~g~~D~iV~N~ANpDMVGHTG~~eatiKAvEavD~~lg~ivd~~-----  429 (509)
T COG0696         363 ATYDLKPEMSAKEVTDALVEAI--------EKGKYDLIVLNYANPDMVGHTGNFEATIKAVEAVDECLGRIVDAV-----  429 (509)
T ss_pred             cccccCcccchHHHHHHHHHHH--------hCCCCCEEEEecCCCccCcccccHHHHHHHHHHHHHHHHHHHHHH-----
Confidence            3444433344566778888888        34458999999999999999999999999 999999999999984     


Q ss_pred             ccceeEEEEEEecccccccCC
Q 024730          206 VGSRLHLSVVLSYGQVLEADN  226 (263)
Q Consensus       206 i~srlhlsvvlsYG~~~~~~~  226 (263)
                      ..-.-++-+.---|++-.-.+
T Consensus       430 ~~~gg~~~iTaDHGNaE~m~d  450 (509)
T COG0696         430 KKNGGTLLITADHGNAEQMSD  450 (509)
T ss_pred             HhcCCeEEEeecCcchhhccC
Confidence            344556666667777765544

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	263
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	6e-04

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 40.2 bits (93), Expect = 6e-04
 Identities = 49/369 (13%), Positives = 88/369 (23%), Gaps = 143/369 (38%)

Query: 3   DKPSKALVLYGDG------LARFVEPSH-------------------------AHLHSLA 31
            +P+K +++ G        +A  V  S+                           L  L 
Sbjct: 147 LRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLL 206

Query: 32  SKAACGFLSLP---IAPPSESEEE--------------------------RIVREFA--- 59
            +    + S                                         +    F    
Sbjct: 207 YQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSC 266

Query: 60  -VLI---DAN-QDYLSGI------------GEHTTE-----LKW----EEKSPFQ--TIS 91
            +L+        D+LS                   E     LK+     +  P +  T +
Sbjct: 267 KILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTN 326

Query: 92  DRFMGLKAALI----TTNSRLKSFGDKLGFATLQLNELIETS-DSLSGS----------- 135
            R + + A  I     T    K           +L  +IE+S + L  +           
Sbjct: 327 PRRLSIIAESIRDGLATWDNWKHVNCD------KLTTIIESSLNVLEPAEYRKMFDRLSV 380

Query: 136 -PIDV-VASELLKLLGLQRGKMEEVSQFDLVLVHIGAGEKTNDDKGKAVAHDLEYINALV 193
            P    + + LL L+        +V      L      EK    +       +       
Sbjct: 381 FPPSAHIPTILLSLIWFD-VIKSDVMVVVNKLHKYSLVEK-QPKESTISIPSI------- 431

Query: 194 RVILQMAQPATEVGSRLHLSVVLSYGQVLEADNSNLSV--------------LISIDEKS 239
              L++        + LH S+V  Y      D+ +L                L +I+   
Sbjct: 432 --YLELKVKLENEYA-LHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEH-- 486

Query: 240 SDLSALFPR 248
            +   LF  
Sbjct: 487 PERMTLFRM 495

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	263
3kd8_A	399	2,3-bisphosphoglycerate-independent phosphoglycera	99.77
2zkt_A	412	2,3-bisphosphoglycerate-independent phosphoglycer	99.36
2i09_A	403	Phosphopentomutase; structural genomics, target T1	97.62
3ot9_A	399	Phosphopentomutase; alkaline phosphatase like core	97.36
3igz_B	561	Cofactor-independent phosphoglycerate mutase; glyc	97.36
1o98_A	511	2,3-bisphosphoglycerate-independent phosphoglycera	96.2
1zed_A	484	Alkaline phosphatase; phosphoserine, substrate ana	95.18
3tg0_A	449	Apase, alkaline phosphatase; hydrolase; 1.20A {Esc	91.83
3m7v_A	413	Phosphopentomutase; structural genomics, nysgrc, c	86.1

>3kd8_A 2,3-bisphosphoglycerate-independent phosphoglycerate mutase; structural genomics, PSI-2, protein genomics, MCSG, glycolysis isomerase; 2.60A {Thermoplasma acidophilum} PDB: 3idd_A

Probab=99.77  E-value=1.8e-19  Score=170.40  Aligned_cols=106  Identities=18%  Similarity=0.216  Sum_probs=89.2

Q ss_pred             cCCCCCCchhhhccccceeeeecCchhhhhhhhcCceeeccCcccccCCCCCCCChhHHHHHHHHHhccccCcccccCcc
Q 024730           82 EEKSPFQTISDRFMGLKAALITTNSRLKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQF  161 (263)
Q Consensus        82 ~~~~~ipt~sERFmGmKAA~VTn~~likgfg~~lGf~V~~~~gl~g~~ds~~~~~~~~~a~~alkLLGf~eg~~~~~s~f  161 (263)
                      .+.|.+|+|.||| |+|+|+|++.++++|+|+.+||+|+.++|+||..+|    +|++|+++++++|          ++|
T Consensus       227 G~~p~~~~f~e~~-gl~~~~Ia~~~l~~GLa~~aGm~~~~vpgatg~~dt----~~~~k~~~~i~~l----------~~~  291 (399)
T 3kd8_A          227 GKVPAIPSFTEKN-RMKGACVVGSPWLKGLCRLLRMDVFDVPGATGTVGS----NYRGKIEKAVDLT----------SSH  291 (399)
T ss_dssp             EECCCCCCHHHHH-SSCEEEECCCHHHHHHHHHTTCEEECCCC------C----CHHHHHHHHHHHT----------TTC
T ss_pred             CcCCCCCChhHhh-CCcceEEecchHHHHHHHhCCCeeeeccCcCCCccc----cHHHHHHHHHHHH----------hhC
Confidence            4578899999999 999999999999999999999999999999999999    9999999999999          679


Q ss_pred             cEEEEeeccCCccCcCCCcccccC-hHHHHHHHHHHHHhcCCc
Q 024730          162 DLVLVHIGAGEKTNDDKGKAVAHD-LEYINALVRVILQMAQPA  203 (263)
Q Consensus       162 DlVFlHIka~d~ashdG~~~~K~d-IE~iD~lVG~Im~~a~~g  203 (263)
                      ||||+|++..|.++|.|+++.|++ ||.+|+.|++|++ .+++
T Consensus       292 d~v~~n~~~~D~~GH~gd~~~~~~aie~~D~~l~~i~~-l~~~  333 (399)
T 3kd8_A          292 DFVLVNIKATDVAGHDGNYPLKRDVIEDIDRAMEPLKS-IGDH  333 (399)
T ss_dssp             SEEEEEEECC------CCHHHHHHHHHHHHHTTGGGGS-CTTT
T ss_pred             CEEEEEecCcchhhhccCHHHHHHHHHHHHHHHHHHHc-cCCC
Confidence            999999999999999999999999 9999999999998 6643

>2zkt_A 2,3-bisphosphoglycerate-independent phosphoglycer mutase; phosphonopyruvate decarboxylase, isomerase, structural genom NPPSFA; 2.40A {Pyrococcus horikoshii}

Probab=99.36  E-value=7.4e-13  Score=124.64  Aligned_cols=106  Identities=15%  Similarity=0.273  Sum_probs=100.4

Q ss_pred             CCCCCC-chhhhccccceeeeecCchhhhhhhhcCceeeccCcccccCCCCCCCChhHHHHHHHHHhccccCcccccCcc
Q 024730           83 EKSPFQ-TISDRFMGLKAALITTNSRLKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQF  161 (263)
Q Consensus        83 ~~~~ip-t~sERFmGmKAA~VTn~~likgfg~~lGf~V~~~~gl~g~~ds~~~~~~~~~a~~alkLLGf~eg~~~~~s~f  161 (263)
                      ..+.+| ++.|+| +.++++|+..++++|+|+.+||+++..+++|+..++    +++.++.++++.|          +.+
T Consensus       230 ~~p~~~~~~~~~~-~~~~~~Va~~~l~~Gigk~~gmd~~~~~g~t~~~~~----~~~~~~~~~~~~l----------~~~  294 (412)
T 2zkt_A          230 TYPNIPMKFTEQW-KVKAAGVIAVALVKGVARAVGFDVYTPEGATGEYNT----NEMAKAKKAVELL----------KDY  294 (412)
T ss_dssp             CCCCCSSCHHHHH-TCCEEEECCSHHHHHHHHHTTCEEECCTTCCSSTTC----CHHHHHHHHHHHH----------HHC
T ss_pred             CCCCCCccHHHHh-CcCcceEeeccccchhhhhcccceeeccCccCCCCC----CHHHHHHHHHHHh----------cCC
Confidence            568899 999999 999999999999999999999999999999999998    9999999999999          478


Q ss_pred             cEEEEeeccCCccCcCCCcccccC-hHHHHHHHHHHHHhcCCc
Q 024730          162 DLVLVHIGAGEKTNDDKGKAVAHD-LEYINALVRVILQMAQPA  203 (263)
Q Consensus       162 DlVFlHIka~d~ashdG~~~~K~d-IE~iD~lVG~Im~~a~~g  203 (263)
                      ||||+|+...|.++|.|+...+.. ||++|+.|+.|+++.+..
T Consensus       295 d~v~v~~~~~D~~GH~~d~~~~~~aie~~D~~lg~ll~al~~~  337 (412)
T 2zkt_A          295 DFVFLHFKPTDAAGHDNKPKLKAELIERADRMIGYILDHVDLE  337 (412)
T ss_dssp             SEEEEEECHHHHHHHTTCHHHHHHHHHHHHHHHHHHHTTSCTT
T ss_pred             CEEEEcCccCChHHHcCCHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence            999999999999999999999999 999999999999987763

>2i09_A Phosphopentomutase; structural genomics, target T1865, NYSGXRC, PSI, protein structure initiative; 2.00A {Streptococcus mutans} PDB: 3m7v_A

Probab=97.62  E-value=3.2e-05  Score=73.81  Aligned_cols=75  Identities=7%  Similarity=0.046  Sum_probs=59.8

Q ss_pred             eeeccCcccccC-CCCCCCChhHHHHHHHHHhccccCccccc-Ccc-cEEEEeeccCCc-cCcCCCcccccC-hHHHHHH
Q 024730          118 ATLQLNELIETS-DSLSGSPIDVVASELLKLLGLQRGKMEEV-SQF-DLVLVHIGAGEK-TNDDKGKAVAHD-LEYINAL  192 (263)
Q Consensus       118 ~V~~~~gl~g~~-ds~~~~~~~~~a~~alkLLGf~eg~~~~~-s~f-DlVFlHIka~d~-ashdG~~~~K~d-IE~iD~l  192 (263)
                      ++|.-.|++... .+   .+.+..++++++.|        +. ..+ ||||+|+...|. ++|.|+.+.+.. ||++|+.
T Consensus       252 Dif~g~GiT~~~~~~---~~~~e~~d~~i~~l--------~~~~~~~dfi~vn~~~~Dm~~GH~~d~~~y~~aIe~vD~~  320 (403)
T 2i09_A          252 DIFNGSGITNDMGHN---KSNSHGVDTLIKTM--------GLSAFTKGFSFTNLVDFDALYGHRRNAHGYRDCLHEFDER  320 (403)
T ss_dssp             HHTTTTTCSEECCCC---SSHHHHHHHHHHHH--------HCSSCCSEEEEEEECHHHHHTTTTTCHHHHHHHHHHHHHH
T ss_pred             HeecCCCccccccCC---CCHHHHHHHHHHHH--------HhcCCCCCEEEEEeccCCcccCcCCCHHHHHHHHHHHHHH
Confidence            344445555443 33   25677899999999        33 346 999999999996 999999999999 9999999


Q ss_pred             HHHHHHhcCCc
Q 024730          193 VRVILQMAQPA  203 (263)
Q Consensus       193 VG~Im~~a~~g  203 (263)
                      ||+|++..+++
T Consensus       321 LG~Il~aL~~~  331 (403)
T 2i09_A          321 LPEIIAAMKVD  331 (403)
T ss_dssp             HHHHHHTCCTT
T ss_pred             HHHHHHhhCCC
Confidence            99999998864

>3ot9_A Phosphopentomutase; alkaline phosphatase like core domain, R phosphate, ribose-1-phosphate, glucose-1,6-bisphosphate, PH transfer, isomerase; HET: TPO G16; 1.75A {Bacillus cereus} PDB: 3m8y_A* 3m8w_A* 3m8z_A* 3twz_A* 3tx0_A 3uo0_A* 3un2_A 3un3_A* 3un5_A 3uny_A

Probab=97.36  E-value=0.00013  Score=69.48  Aligned_cols=60  Identities=8%  Similarity=0.024  Sum_probs=53.8

Q ss_pred             ChhHHHHHHHHHhccccCcccccCcccEEEEeeccCCc-cCcCCCcccccC-hHHHHHHHHHHHHhcCCc
Q 024730          136 PIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGAGEK-TNDDKGKAVAHD-LEYINALVRVILQMAQPA  203 (263)
Q Consensus       136 ~~~~~a~~alkLLGf~eg~~~~~s~fDlVFlHIka~d~-ashdG~~~~K~d-IE~iD~lVG~Im~~a~~g  203 (263)
                      +....++++++.|        +...+||||+|+...|. ++|.++...... ||++|+.||+|++..+..
T Consensus       263 ~~~~~~d~~i~~L--------~~~~~dfv~vn~~~~D~~~GH~~~~~~Y~~aIe~vD~~IGrIL~~L~e~  324 (399)
T 3ot9_A          263 SNMDGMDKLVDTL--------NMDFTGLSFLNLVDFDALFGHRRDPQGYGEALQEYDARLPEVFAKLKED  324 (399)
T ss_dssp             SHHHHHHHHHHHH--------TSCCSEEEEEEECHHHHHTTTTTCHHHHHHHHHHHHTTHHHHHHHCCTT
T ss_pred             ChHHHHHHHHHHH--------HhCCCCEEEEEecCCcccccccCCHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence            5678899999999        33468999999999999 999999999998 999999999999998864

>3igz_B Cofactor-independent phosphoglycerate mutase; glycolysis, cobalt, isomerase; HET: 3PG 2PG; 1.90A {Leishmania mexicana} PDB: 3igy_B* 3nvl_A

Probab=97.36  E-value=5.8e-05  Score=74.82  Aligned_cols=60  Identities=7%  Similarity=0.175  Sum_probs=54.0

Q ss_pred             CChhHHHHHHHHHhccccCcccccCcccEEEEeeccCCccCcCCCcccccC-hHHHHHHHHHHHHhcCC
Q 024730          135 SPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGAGEKTNDDKGKAVAHD-LEYINALVRVILQMAQP  202 (263)
Q Consensus       135 ~~~~~~a~~alkLLGf~eg~~~~~s~fDlVFlHIka~d~ashdG~~~~K~d-IE~iD~lVG~Im~~a~~  202 (263)
                      -++..+++++++.|        +..+|||||+|+..+|.++|.|+.+.+.. ||++|+.||+|++..+.
T Consensus       396 msa~ev~d~~i~al--------~~~~~DfI~vn~an~DmvGHtGd~~a~~kAIE~vD~~LGrIl~aL~e  456 (561)
T 3igz_B          396 MQSAAITEAAIEAL--------KSGMYNVVRINFPNGDMVGHTGDLKATITGVEAVDESLAKLKDAVDS  456 (561)
T ss_dssp             TTHHHHHHHHHHHH--------HHSCCSEEEEEECHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHH--------HhCCCCEEEEecCChhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            36788999999999        44579999999999999999999999999 99999999999998654

>1o98_A 2,3-bisphosphoglycerate-independent phosphoglycerate mutase; isomerase, alpha/beta-type structure; HET: 2PG; 1.4A {Bacillus stearothermophilus} SCOP: c.105.1.1 c.76.1.3 PDB: 1ejj_A* 1eqj_A* 1o99_A* 2ify_A

Probab=96.20  E-value=0.0044  Score=60.62  Aligned_cols=109  Identities=15%  Similarity=0.165  Sum_probs=76.7

Q ss_pred             CCCchhhhc--cccceeeeecCchhhhhhh---------hcCceeeccC-cccccCCCCCCCChhHHHHHHHHHhccccC
Q 024730           86 PFQTISDRF--MGLKAALITTNSRLKSFGD---------KLGFATLQLN-ELIETSDSLSGSPIDVVASELLKLLGLQRG  153 (263)
Q Consensus        86 ~ipt~sERF--mGmKAA~VTn~~likgfg~---------~lGf~V~~~~-gl~g~~ds~~~~~~~~~a~~alkLLGf~eg  153 (263)
                      ..++|.|+.  -|++.+.|+..+....+.-         ..|++.+..+ ..+++.+....-.....+.++++.|     
T Consensus       313 ~~~TL~E~L~~~Gy~~~~IaetekyahvtfF~nGg~~~~~~G~dr~l~~sp~v~tYDl~p~ms~~ev~d~ai~~L-----  387 (511)
T 1o98_A          313 LDNTIGEVLSQHGLRQLRIAETEKYPHVTFFMSGGREEEFPGEDRILINSPKVPTYDLKPEMSAYEVTDALLKEI-----  387 (511)
T ss_dssp             CCSCHHHHHHHTTCCEEEEEEGGGHHHHTTTTTTSCCSCCTTEEEEEECCCSCSSGGGSTTTTHHHHHHHHHHHH-----
T ss_pred             ccchHHHHHHHCCCcEEEEecccccCceeeecCCCcccccCCCcceecccCcccccccCccccHHHHHHHHHHHH-----
Confidence            355666643  2888888887776666544         3455432222 1233333211234567889999998     


Q ss_pred             cccccCcccEEEEeeccCCccCcCCCcccccC-hHHHHHHHHHHHHhcCC
Q 024730          154 KMEEVSQFDLVLVHIGAGEKTNDDKGKAVAHD-LEYINALVRVILQMAQP  202 (263)
Q Consensus       154 ~~~~~s~fDlVFlHIka~d~ashdG~~~~K~d-IE~iD~lVG~Im~~a~~  202 (263)
                         +..++||+|+|....|..+|.++.+.... ||++|+.||++++..+.
T Consensus       388 ---~~~kpdfi~lnf~~pD~~GH~~~~~~y~~aIe~vD~~lGrll~~Lk~  434 (511)
T 1o98_A          388 ---EADKYDAIILNYANPDMVGHSGKLEPTIKAVEAVDECLGKVVDAILA  434 (511)
T ss_dssp             ---HTTCCSEEEEEECHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ---HccCCcEEEEeCCCCcccccccCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence               23569999999999999999999888888 99999999999987653

>1zed_A Alkaline phosphatase; phosphoserine, substrate analog, hydro; HET: NAG PNP; 1.57A {Homo sapiens} SCOP: c.76.1.1 PDB: 1zeb_A* 1zef_A* 2glq_A* 3mk0_A* 3mk1_A* 3mk2_A* 1ew2_A*

Probab=95.18  E-value=0.0089  Score=58.10  Aligned_cols=60  Identities=8%  Similarity=0.053  Sum_probs=54.1

Q ss_pred             CCChhHHHHHHHHHhccccCcccccCcccEEEEeec--cCCccCcCCCcccccC-hHHHHHHHHHHHHhcCC
Q 024730          134 GSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIG--AGEKTNDDKGKAVAHD-LEYINALVRVILQMAQP  202 (263)
Q Consensus       134 ~~~~~~~a~~alkLLGf~eg~~~~~s~fDlVFlHIk--a~d~ashdG~~~~K~d-IE~iD~lVG~Im~~a~~  202 (263)
                      .+....++++++++|.         +.+|.+||||+  ..|.++|+++...+.. ++.+|+.|+.+++..++
T Consensus       285 ~P~L~emt~~ai~~L~---------~~~~Gffl~veg~~iD~~gH~~d~~~~~~~~~~fD~al~~~~~~~~~  347 (484)
T 1zed_A          285 DPSLMEMTEAALRLLS---------RNPRGFFLFVEGGRIDHGHHESRAYRALTETIMFDDAIERAGQLTSE  347 (484)
T ss_dssp             CCCHHHHHHHHHHHHT---------TCTTCEEEEEEETTHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCT
T ss_pred             CCCHHHHHHHHHHHHH---------hcCCcEEEEecccCcchhhhcCCHHHHHHHHHHHHHHHHHHHHhcCC
Confidence            5789999999999991         34899999999  8889999999999999 99999999999998765

>3tg0_A Apase, alkaline phosphatase; hydrolase; 1.20A {Escherichia coli} SCOP: c.76.1.1 PDB: 1b8j_A 1ed9_A 1ew8_A 1ew9_A 1ed8_A 1y6v_A 3bdg_B 1elx_A 2g9y_A 2ga3_A* 3bdh_A 3cmr_A 1elz_A 1hjk_A* 1hqa_A 1ely_A 3dyc_A 1ali_A 1alj_A 3bdf_A ...

Probab=91.83  E-value=0.067  Score=51.77  Aligned_cols=77  Identities=16%  Similarity=0.156  Sum_probs=58.5

Q ss_pred             CCChhHHHHHHHHHhccccCcccccCc-cc--EEEEeeccCCccCcCCCcccccC-hHHHHHHHHHHHHhcC--Ccccc-
Q 024730          134 GSPIDVVASELLKLLGLQRGKMEEVSQ-FD--LVLVHIGAGEKTNDDKGKAVAHD-LEYINALVRVILQMAQ--PATEV-  206 (263)
Q Consensus       134 ~~~~~~~a~~alkLLGf~eg~~~~~s~-fD--lVFlHIka~d~ashdG~~~~K~d-IE~iD~lVG~Im~~a~--~gs~i-  206 (263)
                      .+....+.+++|++|          ++ ++  |+||+.+..|.++|+++...+.. ++.+|+.|+.+++...  +-+-| 
T Consensus       296 ~PsL~eMT~kAi~~L----------~~~~~GfFl~VEg~~iD~a~H~nd~~~~~~e~~~fD~av~~a~~~~~~~~dTLii  365 (449)
T 3tg0_A          296 VPTLAQMTDKAIELL----------SKNEKGFFLQVEGASIDKQDHAANPCGQIGETVDLDEAVQRALEFAKKEGNTLVI  365 (449)
T ss_dssp             SCCHHHHHHHHHHHH----------TTCSSCEEEEEEETHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHSSEEEE
T ss_pred             CCCHHHHHHHHHHHH----------hhCCCcEEEEEeccccchhhccCCHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEE
Confidence            467889999999999          33 44  67777788999999999999999 9999999999998765  22221 


Q ss_pred             --cceeEEEEEEeccc
Q 024730          207 --GSRLHLSVVLSYGQ  220 (263)
Q Consensus       207 --~srlhlsvvlsYG~  220 (263)
                        |-+=|-..+++|+.
T Consensus       366 VTADH~~~~~~~g~~~  381 (449)
T 3tg0_A          366 VTADHAHASQIVAPDT  381 (449)
T ss_dssp             EECSSBCSCEEECTTC
T ss_pred             EeCCCCCcccccCCCC
Confidence              23334445667764

>3m7v_A Phosphopentomutase; structural genomics, nysgrc, cytoplasm, isomerase, manganese binding, PSI-2, protein structure initiative; 2.00A {Streptococcus mutans}

Probab=86.10  E-value=0.1  Score=44.72  Aligned_cols=46  Identities=7%  Similarity=0.011  Sum_probs=38.1

Q ss_pred             cCcccEEEEeeccCCc-cCcCCCcccccC-hHHHHHHHHHHHHhcCCc
Q 024730          158 VSQFDLVLVHIGAGEK-TNDDKGKAVAHD-LEYINALVRVILQMAQPA  203 (263)
Q Consensus       158 ~s~fDlVFlHIka~d~-ashdG~~~~K~d-IE~iD~lVG~Im~~a~~g  203 (263)
                      ...+++++.+....+. ..|.++.+...+ ||++|..||+||+.-++.
T Consensus       286 ~~~~~~~~~~~~~~d~~~~~~~~~~~y~~~i~~~D~~vg~~l~~L~en  333 (413)
T 3m7v_A          286 AFTKGFSFTNLVDFDALYGHRRNAHGYRDCLHEFDERLPEIIAAMKVD  333 (413)
T ss_dssp             SCCSEEEEEEECHHHHHTTTTTCHHHHHHHHHHHHHHHHHHHHTCCTT
T ss_pred             ccccccceecccccchhhhcchhHHHHHHHHHHHHhHHHHHHHhcCCC
Confidence            3667899988877664 578888888888 999999999999986653

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00