Citrus Sinensis ID: 024804

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260--
Protein Sequence
MDERGGSFVAVRRISQGLDRGNTCHSTSAEVVAGSAAWLGRGLSCVCAQRRESDPRPSFDLTPAQEECLQRLQLRIDVAYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGKDPSTDFRGGGFISLENLLYLARNFPDLLRKQEGDRSVWEYPFAVAGVNITFMLIQMLDLEAVKPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRASYMDFNTVMKSTRRQLERELLLEDVTRLEDLPSYSLLSR
Secondary Structure (PSIPRED)
ccccccccHHHHHHcccccccccccccccccccccHHHHHccccHHHHHcccccccccccccHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHccccccccccHHHHHHHHccccccccccccccHHHHHHHHHHHHccHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccEEEEEEccccccccccccccccEEEEccHHHHHHccHHHHHccccccHHHcccHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHcccccccHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHcccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHccccccHcccccHHHHcc
Coil and Loop (DISEMBL)
MDERGGSFVAVRRIsqgldrgntchstsAEVVAGSAAWLGRGLSCVcaqrresdprpsfdltpAQEECLQRLQLRIdvaydssiPEHREALRALWNAAFPDEELRDLISEQWKemgwqgkdpstdfrgggfiSLENLLYLARNFpdllrkqegdrsvweypfavagVNITFMLIQMLdleavkprtMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRASYMDFNTVMKSTRRQLERELLLEDVtrledlpsysllsr
Flexible Loop (DISEMBL)
MDERGGSFVAVRrisqgldrgntchSTSAEVVAGSAAWLGRGLSCVCAQRRESDprpsfdltpAQEECLQRLQLRIDVAYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGKDPSTDFRGGGFISLENLLYLARNFPDLLRKQEGDRSVWEYPFAVAGVNITFMLIQMLDLEAVKPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRASYMDFNTVMKSTRRQLEREllledvtrledlpsysllsr
Low Complexity Region (SEG)
MDERGGSFVAVRRISQGLDRGNTCHSTSAEVVAGSAAWLGRGLSCVCAQRRESDPRPSFDLTPAQEECLQRLQLRIDVAYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGKDPSTDFRGGGFISLENLLYLARNFPDLLRKQEGDRSVWEYPFAVAGVNITFMLIQMLDLEAVKPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRASYMDFNTVMKSTrrqlerellleDVTRLEDLPSYSLLSR
Disordered region (IsUnstruct)
********VAVRRISQGLDRGNTCHSTSAEVVAGSAAWLGRGLSCVCA******************ECLQRLQLRIDVAYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGKDPSTDFRGGGFISLENLLYLARNFPDLLRKQEGDRSVWEYPFAVAGVNITFMLIQMLDLEAVKPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRASYMDFNTVMKSTRRQLERELLLEDV**************
Disordered Region (DISOPRED)
**********VRRISQGLD************VAGSAAWLGRGLSCVC***********FDLTPAQEECLQRLQLRIDVAYDSSIPEHREALRALWNAAF**************EMGWQGKDPSTDFRGGGFISLENLLYLARNFPDLLRKQEGDRSVWEYPFAVAGVNITFMLIQMLDLEAVKPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRASYMDFNTVMKSTRRQLERELLLEDVTRLEDLPSYSLLSR
Disordered Region (DISEMBL)
MDERGGSFVAVRRISQGLDRGNTCHSTSAEVVAGSAAWLGRGLSCVCAQR********FDLTPAQEECLQRLQLRIDVAYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGKDPSTDFRGGGFISLENLLYLARNFPDLLRKQEGDRSVWEYPFAVAGVNITFMLIQMLDLEAVKPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRASYMDFNTVMKSTRRQLERELLLEDVTRLEDLPSYSLLSR
Disordered Region (DISPRO)
*****GSFVAVRRISQGLDRGNTCHSTSAEVVAGSAAWLGRGLSCVCAQRRESDPRPSFDLTPAQEECLQRLQLRIDVAYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGKDPSTDFRGGGFISLENLLYLARNFPDLLRKQEGDRSVWEYPFAVAGVNITFMLIQMLDLEAVKPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRASYMDFNTVMKSTRRQLERELLLEDVTRLEDLPSYSLLSR
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
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Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MDERGGSFVAVRRISQGLDRGNTCHSTSAEVVAGSAAWLGRGLSCVCAQRRESDPRPSFDLTPAQEECLQRLQLRIDVAYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGKDPSTDFRGGGFISLENLLYLARNFPDLLRKQEGDRSVWEYPFAVAGVNITFMLIQMLDLEAVKPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRASYMDFNTVMKSTRRQLERELLLEDVTRLEDLPSYSLLSR
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	262	2.2.26 [Sep-21-2011]
Q54YW1	977	ELMO domain-containing pr	yes	no	0.702	0.188	0.314	5e-25
Q54RS7	618	ELMO domain-containing pr	no	no	0.671	0.284	0.340	2e-23
Q54UP9	1267	Ankyrin repeat and ELMO d	no	no	0.587	0.121	0.308	9e-19
Q54VR8	284	ELMO domain-containing pr	no	no	0.568	0.524	0.322	9e-18
Q08DZ3	293	ELMO domain-containing pr	yes	no	0.748	0.668	0.297	2e-16
Q8IZ81	293	ELMO domain-containing pr	yes	no	0.515	0.460	0.333	2e-16
Q8BGF6	293	ELMO domain-containing pr	yes	no	0.557	0.498	0.333	7e-15
Q499U2	720	Engulfment and cell motil	yes	no	0.671	0.244	0.276	2e-14
A6QR40	652	Engulfment and cell motil	no	no	0.660	0.265	0.270	3e-14
Q0IIE6	326	ELMO domain-containing pr	no	no	0.614	0.493	0.313	4e-14

>sp|Q54YW1|ELMOA_DICDI ELMO domain-containing protein A OS=Dictyostelium discoideum GN=elmoA PE=1 SV=1

 Score =  115 bits (287), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 67/213 (31%), Positives = 100/213 (46%), Gaps = 29/213 (13%)

Query: 65  QEECLQRLQLRIDVAYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGKDPST 124
           Q    Q +  R +V ++    EH   L  LW+  +P  +L   +SEQWK+MG+QG DP T
Sbjct: 362 QRHRFQVITNRKNVTFNKESSEHDALLMKLWSLTYPGVKLESRVSEQWKQMGFQGTDPCT 421

Query: 125 DFRGGGFISLENLLYLARNFPDLLRK---QEGDRSVWEYPFAVAGVNITFML---IQMLD 178
           DFR  G   L+NL+Y A+N+ +  RK    + DR   EYP A AG+ +TF L   I  + 
Sbjct: 422 DFRAMGIWGLDNLIYFAQNYNEKFRKIVNSQIDRKEREYPTATAGIVLTFELYNSIFKMG 481

Query: 179 LEAVKPRTMVGAT---------------FLKFLSENESAFDLLYCITFKLMDHQWLAMRA 223
              + P     +                F      +  AF+ +YC TF+++D  W  M  
Sbjct: 482 TPNLNPYNSTTSNTTSNTTSTTNIDDLPFFPLFFSHPHAFEEVYCTTFQILDSTWDDMNG 541

Query: 224 SYMDFNTVMKSTRRQLERELLLEDVTRLEDLPS 256
           +YM F  +M S +  +        +T LE  P+
Sbjct: 542 TYMHFQKIMSSVKNLI--------ITALESKPT 566

Functions as a negative regulator of actin polymerization. Modulates actin/myosin II at cortex actinomyosins to prevent excessive F-actin polymerization around the cell periphery, thereby maintaining proper cell shape during phagocytosis and chemotaxis.
Dictyostelium discoideum (taxid: 44689)

>sp|Q54RS7|ELMOC_DICDI ELMO domain-containing protein C OS=Dictyostelium discoideum GN=elmoC PE=4 SV=1

 Score =  109 bits (273), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 64/188 (34%), Positives = 102/188 (54%), Gaps = 12/188 (6%)

Query: 61  LTPAQEECLQRLQLRIDVAYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGK 120
           +T  Q + ++ L  +    Y+S+ P+H E L+ LW+  +P++E +   S  WK+ G+Q  
Sbjct: 357 VTAKQSQTIKILFQKKSTIYESTNPDHEEYLKHLWSLLYPEQEFQKK-SPLWKKFGFQSD 415

Query: 121 DPSTDFRGGGFISLENLLYLARNFPDLLRKQEGDRSVWEYPFAVAGVNIT---FMLIQML 177
           DP+ DFRG G + L NL++L ++  D +  QE      +YPFAVAG+NI+   F + Q+ 
Sbjct: 416 DPTRDFRGMGIMGLLNLIHLVQHHNDWV--QEILAQDRDYPFAVAGINISNLIFEVFQIS 473

Query: 178 DLEAVKPRTMVG------ATFLKFLSENESAFDLLYCITFKLMDHQWLAMRASYMDFNTV 231
           +    +P           A        N+ AF+ LY + F L+DH W+ M A+YM F  V
Sbjct: 474 EDSLQQPWYSSFWSSSYMAMLCSMSRHNDHAFEELYFLIFNLLDHLWIQMNATYMMFPLV 533

Query: 232 MKSTRRQL 239
           +K  + QL
Sbjct: 534 IKKLKSQL 541

Dictyostelium discoideum (taxid: 44689)

>sp|Q54UP9|ELMOD_DICDI Ankyrin repeat and ELMO domain-containing protein D OS=Dictyostelium discoideum GN=elmoD PE=4 SV=1

 Score = 94.0 bits (232), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 55/178 (30%), Positives = 91/178 (51%), Gaps = 24/178 (13%)

Query: 69  LQRLQLRIDVAYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGKDPSTDFRG 128
           +Q L +     Y+   P H+  L  LW+  FP++  +    E W+ +G+Q KDPS+DFRG
Sbjct: 290 IQGLIMDSKTPYNKDEPSHQRLLETLWSTLFPNQVFQR-SHENWQIIGFQNKDPSSDFRG 348

Query: 129 GGFISLENLLYLARNFPDLL------RKQEGDRSVWEYPFAVAGVNITFMLIQMLDLEAV 182
            G   L++L+YLA+N  D+       R+ E +     YP+A +G+ +T  L+     E V
Sbjct: 349 MGLAGLKHLIYLAQNHKDMFMNPLINRQPEANY----YPYATSGIQVTSFLV-----ECV 399

Query: 183 KP-------RTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRASYMDFNTVMK 233
           KP         ++G  +   L E+E+A + +YC+  ++    W    A+YM F  V +
Sbjct: 400 KPINISANHSDVIGQIY-PILFESENALNEIYCVLMEIFGIVWKDWNATYMIFQKVFQ 456

Dictyostelium discoideum (taxid: 44689)

>sp|Q54VR8|ELMOB_DICDI ELMO domain-containing protein B OS=Dictyostelium discoideum GN=elmoB PE=4 SV=1

 Score = 90.9 bits (224), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 51/158 (32%), Positives = 84/158 (53%), Gaps = 9/158 (5%)

Query: 78  VAYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGKDPSTDFRGGGFISLENL 137
           + YD++  EH  +L  LW A  PD      +S++W  +G+QG DP+TDFRG G + L+NL
Sbjct: 116 IPYDNNNLEHEASLERLWEALLPDVRRSARLSKEWGTLGFQGMDPATDFRGMGILGLDNL 175

Query: 138 LYLARNFPDLLRK-QEGDRSVWEYPFAVAGVNITFMLIQMLDLEAVKPRTMVGATFLKFL 196
           +Y +    +  R+  +   S   YPFA+ G+NIT +++ ++D    K       + L   
Sbjct: 176 IYFSTQHSEDAREILKNSNSKCCYPFAITGINITALVLNLIDKPHFKIYFFKNGSTL--- 232

Query: 197 SENESAFDLLYCITFKLMDHQWLAMR-ASYMDFNTVMK 233
               + F+ LY + F   D  + + +  S M+FNT+ K
Sbjct: 233 ----TQFNELYSLVFISFDRFYQSKKPKSIMEFNTIKK 266

Dictyostelium discoideum (taxid: 44689)

>sp|Q08DZ3|ELMD2_BOVIN ELMO domain-containing protein 2 OS=Bos taurus GN=ELMOD2 PE=1 SV=1

 Score = 86.3 bits (212), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 64/215 (29%), Positives = 98/215 (45%), Gaps = 19/215 (8%)

Query: 45  CVCAQRRESDPRPSFD--LTPAQEECLQRL----QLRIDV------AYDSSIPEHREALR 92
           CV    +E +  P  D       + CL ++    QL +DV       YDS   +H + L 
Sbjct: 73  CVEDIMKEKNINPEKDASFKICMKACLLQISGYKQLYLDVESVRKKPYDSDNLQHEKLLI 132

Query: 93  ALWNAAFPDEELRDLISEQWKEMGWQGKDPSTDFRGGGFISLENLLYLARNFPDLLRK-- 150
            LWN   P ++L+  IS+QW ++G+QG DP TDFRG G + L NL+Y + N+     +  
Sbjct: 133 KLWNLLMPTKKLKARISKQWADIGFQGDDPKTDFRGMGILGLINLVYFSENYTSEAHQIL 192

Query: 151 QEGDRSVWEYPFAVAGVNITFMLIQMLDLEAVKPRTMVGATFLKFLSENESAFDLLYCIT 210
              +     Y +A+ G+N+T M   +L  EA+K        F+  +   E  F   YC  
Sbjct: 193 SRSNHPKLGYSYAIVGINLTEMAYSLLKSEALKFHLY---NFVPGIPTMEH-FHQFYCYL 248

Query: 211 FKLMDHQWLAMRA-SYMDFNTVMKSTRRQLERELL 244
               D  W   +  S M FN   +    +++  LL
Sbjct: 249 VYEFDKFWFEEKPESIMYFNVYREKFHEKIKGLLL 283

Acts as a GTPase-activating protein (GAP) toward guanine nucleotide exchange factors like ARL2, ARL3, ARF1 and ARF6, but not for GTPases outside the Arf family.

Bos taurus (taxid: 9913)

>sp|Q8IZ81|ELMD2_HUMAN ELMO domain-containing protein 2 OS=Homo sapiens GN=ELMOD2 PE=1 SV=1

 Score = 86.3 bits (212), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 49/147 (33%), Positives = 74/147 (50%), Gaps = 12/147 (8%)

Query: 49  QRRESDPRPSFDLTPAQEECLQRL----QLRIDV------AYDSSIPEHREALRALWNAA 98
           + +  +P          + CL ++    QL +DV       YDS   +H E L  LWN  
Sbjct: 79  KEKNINPEKDASFKICMKMCLLQITGYKQLYLDVESVRKRPYDSDNLQHEELLMKLWNLL 138

Query: 99  FPDEELRDLISEQWKEMGWQGKDPSTDFRGGGFISLENLLYLARNFPDLLRK--QEGDRS 156
            P ++L   IS+QW E+G+QG DP TDFRG G + L NL+Y + N+     +     +  
Sbjct: 139 MPTKKLNARISKQWAEIGFQGDDPKTDFRGMGILGLINLVYFSENYTSEAHQILSRSNHP 198

Query: 157 VWEYPFAVAGVNITFMLIQMLDLEAVK 183
              Y +A+ G+N+T M   +L  EA+K
Sbjct: 199 KLGYSYAIVGINLTEMAYSLLKSEALK 225

Acts as a GTPase-activating protein (GAP) toward guanine nucleotide exchange factors like ARL2, ARL3, ARF1 and ARF6, but not for GTPases outside the Arf family. Regulates IFN-related antiviral responses.

Homo sapiens (taxid: 9606)

>sp|Q8BGF6|ELMD2_MOUSE ELMO domain-containing protein 2 OS=Mus musculus GN=Elmod2 PE=2 SV=1

 Score = 81.3 bits (199), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 51/153 (33%), Positives = 75/153 (49%), Gaps = 7/153 (4%)

Query: 80  YDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGKDPSTDFRGGGFISLENLLY 139
           YDS+  +H + L  LW+   P ++L   IS+QW ++G+QG DP TDFRG G + L NL+Y
Sbjct: 120 YDSANAQHEKMLLKLWSLLMPTKKLTARISKQWADIGFQGDDPKTDFRGMGILGLINLVY 179

Query: 140 LARNFPDLLRK--QEGDRSVWEYPFAVAGVNITFMLIQMLDLEAVKPRTMVGATFLKFLS 197
            + N+     +     +     Y +A+ G+N+T M   +L  EA+K        F+  + 
Sbjct: 180 FSENYTSEAHQILSRSNHPKLGYSYAIVGINLTEMAYSLLKSEALKLHLY---NFVPGVP 236

Query: 198 ENESAFDLLYCITFKLMDHQWLAMRA-SYMDFN 229
             E  F   YC      D  WL     S M FN
Sbjct: 237 TMEH-FHQFYCYLVYEFDKFWLEEEPESIMYFN 268

Acts as a GTPase-activating protein (GAP) toward guanine nucleotide exchange factors like ARL2, ARL3, ARF1 and ARF6, but not for GTPases outside the Arf family.

Mus musculus (taxid: 10090)

>sp|Q499U2|ELMO3_RAT Engulfment and cell motility protein 3 OS=Rattus norvegicus GN=Elmo3 PE=2 SV=1

 Score = 79.7 bits (195), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 54/195 (27%), Positives = 93/195 (47%), Gaps = 19/195 (9%)

Query: 72  LQLRIDVAYDSSIPEHREALRALWNAAF-PDEE----------LRDLISEQWKEMGWQGK 120
           L+ R+    D    E RE L+AL  AAF PD E           R L   +++++G+   
Sbjct: 293 LEPRMRTPLDPYSQEQREQLQALRQAAFEPDGESLGTGLSADRRRSLCVREFRKLGFSNS 352

Query: 121 DPSTDFR--GGGFISLENLLYLARNFPD----LLRKQEGDRSVWEYPFAVAGVNITFMLI 174
            P+ D      G ++L+N+LY +R+ P      + +        E PFA + + +T +L 
Sbjct: 353 SPAQDLERVPPGLLALDNMLYFSRHAPSAYSRFVLENSSREDKHECPFARSSIQLTVLLC 412

Query: 175 QMLDLEAVKPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRASYMDFNTVMKS 234
           ++L +   +P +     F       + +F  L+C+  +L++  W  MRA+  DF+ VM+ 
Sbjct: 413 ELLHVG--EPCSETAQDFSPMFFSQDHSFHELFCVAIQLLNKTWKEMRATQEDFDKVMQV 470

Query: 235 TRRQLERELLLEDVT 249
            R QL R L L+  +
Sbjct: 471 VREQLARTLALKPTS 485

Involved in cytoskeletal rearrangements required for phagocytosis of apoptotic cells and cell motility. Acts in assocation with DOCK1 and CRK. Was initially proposed to be required in complex with DOCK1 to activate Rac Rho small GTPases. May enhance the guanine nucleotide exchange factor (GEF) activity of DOCK1.

Rattus norvegicus (taxid: 10116)

>sp|A6QR40|ELMO3_BOVIN Engulfment and cell motility protein 3 OS=Bos taurus GN=ELMO3 PE=2 SV=1

 Score = 79.0 bits (193), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 52/192 (27%), Positives = 91/192 (47%), Gaps = 19/192 (9%)

Query: 72  LQLRIDVAYDSSIPEHREALRALWNAAFPDE-----------ELRDLISEQWKEMGWQGK 120
           L+ R+    D    E RE L+AL  AAF  E             R L + +++++G+   
Sbjct: 293 LEPRMRTPLDPYSQEQREQLQALRQAAFEPEGESVGAGLSADRRRSLCAREFRKLGFSNS 352

Query: 121 DPSTDFR--GGGFISLENLLYLARNFPD----LLRKQEGDRSVWEYPFAVAGVNITFMLI 174
           +P+ D      G ++L+N+LY +R  P      + +        E PFA + + +T +L 
Sbjct: 353 NPAQDLERVPPGLLALDNMLYFSRQAPSAYSRFVLENSSREDKHECPFARSSIQLTVLLC 412

Query: 175 QMLDLEAVKPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRASYMDFNTVMKS 234
            +L +   +P +     F       + +F  L+C++ +L++  W  MRA+  DF+ VM+ 
Sbjct: 413 DLLHVG--EPCSETAQDFSPMFFGQDQSFHELFCVSIQLLNKTWKEMRATQEDFDKVMQV 470

Query: 235 TRRQLERELLLE 246
            R QL R L L+
Sbjct: 471 VREQLARTLALK 482

Involved in cytoskeletal rearrangements required for phagocytosis of apoptotic cells and cell motility. Acts in assocation with DOCK1 and CRK. Was initially proposed to be required in complex with DOCK1 to activate Rac Rho small GTPases. May enhance the guanine nucleotide exchange factor (GEF) activity of DOCK1.

Bos taurus (taxid: 9913)

>sp|Q0IIE6|ELMD1_BOVIN ELMO domain-containing protein 1 OS=Bos taurus GN=ELMOD1 PE=2 SV=1

 Score = 79.0 bits (193), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 58/185 (31%), Positives = 83/185 (44%), Gaps = 24/185 (12%)

Query: 79  AYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGKDPSTDFRGGGFISLENLL 138
           +YDS  P+H E L  LW    P+  L   IS+QW E+G+QG DP TDFRG G + L NL 
Sbjct: 126 SYDSDNPQHEEMLLKLWKFLKPNTPLESRISKQWCEIGFQGDDPKTDFRGMGLLGLYNLQ 185

Query: 139 YLARN--------FPDLLRKQ--EGDRSVWE---------YPFAVAGVNITFMLIQMLDL 179
           Y A            D L  +  +  ++ WE         Y FA+ G+NIT +   +L  
Sbjct: 186 YFAERDAAAAQQVLSDSLHPKCSKFSKAEWEKKRMDKAIGYSFAIVGINITDLAYNLLVS 245

Query: 180 EAVKPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRA-SYMDFNTVMKSTRRQ 238
            A+K      A     LS  +  F    C         W+       M+FN V +  R++
Sbjct: 246 GALKTHFYNIAPEAPTLSHFQQTF----CYLMHEFHKFWIEEDPMDIMEFNRVREKFRKR 301

Query: 239 LEREL 243
           + ++L
Sbjct: 302 IIKQL 306

Acts as a GTPase-activating protein (GAP) toward guanine nucleotide exchange factors like ARL2, ARL3, ARF1 and ARF6, but not for GTPases outside the Arf family.

Bos taurus (taxid: 9913)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	262
255571033	267	ELMO domain-containing protein, putative	1.0	0.981	0.902	1e-137
225453354	267	PREDICTED: ELMO domain-containing protei	1.0	0.981	0.898	1e-136
449445499	267	PREDICTED: ELMO domain-containing protei	1.0	0.981	0.872	1e-134
356568581	266	PREDICTED: ELMO domain-containing protei	1.0	0.984	0.864	1e-134
356531822	266	PREDICTED: ELMO domain-containing protei	1.0	0.984	0.860	1e-134
297734628	287	unnamed protein product [Vitis vinifera]	1.0	0.912	0.836	1e-133
224137120	267	predicted protein [Populus trichocarpa]	1.0	0.981	0.872	1e-133
224063629	267	predicted protein [Populus trichocarpa]	1.0	0.981	0.865	1e-133
18411543	266	ELMO/CED-12 domain-containing protein [A	1.0	0.984	0.823	1e-127
297817322	266	hypothetical protein ARALYDRAFT_486497 [	1.0	0.984	0.827	1e-127

>gi|255571033|ref|XP_002526467.1| ELMO domain-containing protein, putative [Ricinus communis] gi|223534142|gb|EEF35858.1| ELMO domain-containing protein, putative [Ricinus communis]

 Score =  493 bits (1270), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 241/267 (90%), Positives = 252/267 (94%), Gaps = 5/267 (1%)

Query: 1   MDERGGSFVAVRRISQGLDRG-NTCHSTSAEVVAGSAAWLGRGLSCVCAQRRESDPRPSF 59
           MD+RGGSFVAVRRISQGL+RG NTCHSTSAEVVAGSAAWLGRGLSCVCAQRRESD RPSF
Sbjct: 1   MDDRGGSFVAVRRISQGLERGSNTCHSTSAEVVAGSAAWLGRGLSCVCAQRRESDARPSF 60

Query: 60  DLTPAQEECLQRLQLRIDVAYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQG 119
           DLT  QEECLQRLQ RIDVAYDSSIPEH+EALRALWNAAFP+EELR LISEQWKEMGWQG
Sbjct: 61  DLTLTQEECLQRLQSRIDVAYDSSIPEHQEALRALWNAAFPEEELRGLISEQWKEMGWQG 120

Query: 120 KDPSTDFRGGGFISLENLLYLARNFP----DLLRKQEGDRSVWEYPFAVAGVNITFMLIQ 175
           KDPSTDFRGGGFISLENLL+ A+NFP    DLL+K+EGDRSVWEYPFAVAGVNITFMLIQ
Sbjct: 121 KDPSTDFRGGGFISLENLLFFAKNFPTSFQDLLQKREGDRSVWEYPFAVAGVNITFMLIQ 180

Query: 176 MLDLEAVKPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRASYMDFNTVMKST 235
           MLDLEAVKPRTMVGA FLKFL+ENESAFDLLYCITFKLMDHQWL M ASYMDFNTVMKST
Sbjct: 181 MLDLEAVKPRTMVGAVFLKFLTENESAFDLLYCITFKLMDHQWLNMHASYMDFNTVMKST 240

Query: 236 RRQLERELLLEDVTRLEDLPSYSLLSR 262
           RRQLERELLLED+TRLEDLPSY LL+R
Sbjct: 241 RRQLERELLLEDITRLEDLPSYGLLTR 267

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225453354|ref|XP_002271650.1| PREDICTED: ELMO domain-containing protein A [Vitis vinifera]

 Score =  491 bits (1265), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 240/267 (89%), Positives = 254/267 (95%), Gaps = 5/267 (1%)

Query: 1   MDERGG-SFVAVRRISQGLDRGNTCHSTSAEVVAGSAAWLGRGLSCVCAQRRESDPRPSF 59
           MD+RGG SFVAVRRISQGLDRGNTCHSTSAEVVAGSAAWLGRGLSCVCAQRRESD RPSF
Sbjct: 1   MDDRGGGSFVAVRRISQGLDRGNTCHSTSAEVVAGSAAWLGRGLSCVCAQRRESDARPSF 60

Query: 60  DLTPAQEECLQRLQLRIDVAYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQG 119
           DLTPAQEECLQRLQ RI+V+YDSSI EH+EALRALWNA+FP+EELRDLISEQWKEMGWQG
Sbjct: 61  DLTPAQEECLQRLQSRIEVSYDSSISEHQEALRALWNASFPEEELRDLISEQWKEMGWQG 120

Query: 120 KDPSTDFRGGGFISLENLLYLARNFP----DLLRKQEGDRSVWEYPFAVAGVNITFMLIQ 175
           KDPSTDFRGGGFISLENLL+ ARN+P    DLLRKQEGDR++WEYPFAVAGVNITFMLIQ
Sbjct: 121 KDPSTDFRGGGFISLENLLFFARNYPKSFQDLLRKQEGDRALWEYPFAVAGVNITFMLIQ 180

Query: 176 MLDLEAVKPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRASYMDFNTVMKST 235
           MLDLEAVKPR+M GA FLKFLSENESAFDLLYCITFKLMD+QWLAM ASYMDFNTVMKST
Sbjct: 181 MLDLEAVKPRSMAGAIFLKFLSENESAFDLLYCITFKLMDNQWLAMHASYMDFNTVMKST 240

Query: 236 RRQLERELLLEDVTRLEDLPSYSLLSR 262
           R QLERELLLEDV+RLEDLPSYSLL+R
Sbjct: 241 RCQLERELLLEDVSRLEDLPSYSLLTR 267

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449445499|ref|XP_004140510.1| PREDICTED: ELMO domain-containing protein A-like [Cucumis sativus]

 Score =  484 bits (1247), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 233/267 (87%), Positives = 252/267 (94%), Gaps = 5/267 (1%)

Query: 1   MDERGG-SFVAVRRISQGLDRGNTCHSTSAEVVAGSAAWLGRGLSCVCAQRRESDPRPSF 59
           MD+RGG SFVAVRRISQGL+RGNTCHSTSAEVVAGSAAWLGRGLSCVCAQRRESD RPSF
Sbjct: 1   MDDRGGGSFVAVRRISQGLERGNTCHSTSAEVVAGSAAWLGRGLSCVCAQRRESDARPSF 60

Query: 60  DLTPAQEECLQRLQLRIDVAYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQG 119
           DLTPAQEECL RLQ RID+AYDSSI EH+EALR LWN AFP+EELR LISEQWKEMGWQG
Sbjct: 61  DLTPAQEECLLRLQNRIDIAYDSSITEHQEALRTLWNVAFPEEELRGLISEQWKEMGWQG 120

Query: 120 KDPSTDFRGGGFISLENLLYLARNFP----DLLRKQEGDRSVWEYPFAVAGVNITFMLIQ 175
           KDPSTDFRGGGFISLENLL+ A+NFP    DLLRKQEGDRS+WEYPFAVAGVNITFMLIQ
Sbjct: 121 KDPSTDFRGGGFISLENLLFFAKNFPKSFQDLLRKQEGDRSLWEYPFAVAGVNITFMLIQ 180

Query: 176 MLDLEAVKPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRASYMDFNTVMKST 235
           MLDLEAVKPRT+VGATFLKFL+EN+SAFDLLYCITFKLMDH+WLAM ASYMDFNTVMK+T
Sbjct: 181 MLDLEAVKPRTLVGATFLKFLAENDSAFDLLYCITFKLMDHEWLAMHASYMDFNTVMKAT 240

Query: 236 RRQLERELLLEDVTRLEDLPSYSLLSR 262
           RRQLE+ELL+ED++RLE+LPSY LL+R
Sbjct: 241 RRQLEKELLIEDISRLEELPSYGLLNR 267

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356568581|ref|XP_003552489.1| PREDICTED: ELMO domain-containing protein A-like [Glycine max]

 Score =  482 bits (1241), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 230/266 (86%), Positives = 247/266 (92%), Gaps = 4/266 (1%)

Query: 1   MDERGGSFVAVRRISQGLDRGNTCHSTSAEVVAGSAAWLGRGLSCVCAQRRESDPRPSFD 60
           MD+RGGSFVAVRRISQGLDR NTCHS+SAE V GS AWLGRGLSCVCAQRRESD RPSFD
Sbjct: 1   MDDRGGSFVAVRRISQGLDRSNTCHSSSAEFVTGSTAWLGRGLSCVCAQRRESDARPSFD 60

Query: 61  LTPAQEECLQRLQLRIDVAYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGK 120
           LTPAQEECLQRLQ RID+ YD SIPEH++ALRALW+AAFP+EEL  LISEQWK MGWQGK
Sbjct: 61  LTPAQEECLQRLQNRIDIPYDGSIPEHQDALRALWSAAFPEEELHGLISEQWKNMGWQGK 120

Query: 121 DPSTDFRGGGFISLENLLYLARNFP----DLLRKQEGDRSVWEYPFAVAGVNITFMLIQM 176
           DPSTDFRGGGFISLENLL+ ARNFP    DLLRKQEGDRSVWEYPFAVAGVNITFMLIQM
Sbjct: 121 DPSTDFRGGGFISLENLLFFARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFMLIQM 180

Query: 177 LDLEAVKPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRASYMDFNTVMKSTR 236
           LDLEAVKPRT+VGATFLKFL+EN+SAFDLLYCITFK+MD QWL+MRASYMDFNTVMKSTR
Sbjct: 181 LDLEAVKPRTLVGATFLKFLAENDSAFDLLYCITFKMMDQQWLSMRASYMDFNTVMKSTR 240

Query: 237 RQLERELLLEDVTRLEDLPSYSLLSR 262
           RQLE+ELLLED+ RLED+PSY LL+R
Sbjct: 241 RQLEKELLLEDIMRLEDVPSYKLLTR 266

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356531822|ref|XP_003534475.1| PREDICTED: ELMO domain-containing protein A-like [Glycine max]

 Score =  482 bits (1240), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 229/266 (86%), Positives = 247/266 (92%), Gaps = 4/266 (1%)

Query: 1   MDERGGSFVAVRRISQGLDRGNTCHSTSAEVVAGSAAWLGRGLSCVCAQRRESDPRPSFD 60
           MD+RGGSFVAVRRISQGLDR NTCHS+SAE V GS AWLGRGLSCVCAQRRESD RPSFD
Sbjct: 1   MDDRGGSFVAVRRISQGLDRSNTCHSSSAEFVTGSTAWLGRGLSCVCAQRRESDARPSFD 60

Query: 61  LTPAQEECLQRLQLRIDVAYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGK 120
           LTPAQEECLQRLQ RID+ YD S+PEH++ALR LWNAAFP+EEL  LISEQWK+MGWQGK
Sbjct: 61  LTPAQEECLQRLQSRIDIPYDGSVPEHQDALRDLWNAAFPEEELHGLISEQWKDMGWQGK 120

Query: 121 DPSTDFRGGGFISLENLLYLARNFP----DLLRKQEGDRSVWEYPFAVAGVNITFMLIQM 176
           DPSTDFRGGGFISLENLL+ ARNFP    DLLRKQEGDRSVWEYPFAVAGVNITFMLIQM
Sbjct: 121 DPSTDFRGGGFISLENLLFFARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFMLIQM 180

Query: 177 LDLEAVKPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRASYMDFNTVMKSTR 236
           LDLEAVKPRT+VGATFLKFL+EN+SAFDLLYCITFK+MD QWL+MRASYMDFNTVMKSTR
Sbjct: 181 LDLEAVKPRTLVGATFLKFLAENDSAFDLLYCITFKMMDQQWLSMRASYMDFNTVMKSTR 240

Query: 237 RQLERELLLEDVTRLEDLPSYSLLSR 262
           RQLE+ELLLED+ RLED+PSY LL+R
Sbjct: 241 RQLEKELLLEDIMRLEDVPSYKLLTR 266

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297734628|emb|CBI16679.3| unnamed protein product [Vitis vinifera]

 Score =  480 bits (1236), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 240/287 (83%), Positives = 254/287 (88%), Gaps = 25/287 (8%)

Query: 1   MDERGG-SFVAVRRISQGLDRGNTCHSTS--------------------AEVVAGSAAWL 39
           MD+RGG SFVAVRRISQGLDRGNTCHSTS                    AEVVAGSAAWL
Sbjct: 1   MDDRGGGSFVAVRRISQGLDRGNTCHSTSDLSISVIVNNFMFTDIQICLAEVVAGSAAWL 60

Query: 40  GRGLSCVCAQRRESDPRPSFDLTPAQEECLQRLQLRIDVAYDSSIPEHREALRALWNAAF 99
           GRGLSCVCAQRRESD RPSFDLTPAQEECLQRLQ RI+V+YDSSI EH+EALRALWNA+F
Sbjct: 61  GRGLSCVCAQRRESDARPSFDLTPAQEECLQRLQSRIEVSYDSSISEHQEALRALWNASF 120

Query: 100 PDEELRDLISEQWKEMGWQGKDPSTDFRGGGFISLENLLYLARNFP----DLLRKQEGDR 155
           P+EELRDLISEQWKEMGWQGKDPSTDFRGGGFISLENLL+ ARN+P    DLLRKQEGDR
Sbjct: 121 PEEELRDLISEQWKEMGWQGKDPSTDFRGGGFISLENLLFFARNYPKSFQDLLRKQEGDR 180

Query: 156 SVWEYPFAVAGVNITFMLIQMLDLEAVKPRTMVGATFLKFLSENESAFDLLYCITFKLMD 215
           ++WEYPFAVAGVNITFMLIQMLDLEAVKPR+M GA FLKFLSENESAFDLLYCITFKLMD
Sbjct: 181 ALWEYPFAVAGVNITFMLIQMLDLEAVKPRSMAGAIFLKFLSENESAFDLLYCITFKLMD 240

Query: 216 HQWLAMRASYMDFNTVMKSTRRQLERELLLEDVTRLEDLPSYSLLSR 262
           +QWLAM ASYMDFNTVMKSTR QLERELLLEDV+RLEDLPSYSLL+R
Sbjct: 241 NQWLAMHASYMDFNTVMKSTRCQLERELLLEDVSRLEDLPSYSLLTR 287

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224137120|ref|XP_002327028.1| predicted protein [Populus trichocarpa] gi|222835343|gb|EEE73778.1| predicted protein [Populus trichocarpa]

 Score =  480 bits (1236), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 233/267 (87%), Positives = 251/267 (94%), Gaps = 5/267 (1%)

Query: 1   MDERGGSFVAVRRISQGLDRGN-TCHSTSAEVVAGSAAWLGRGLSCVCAQRRESDPRPSF 59
           MD+RGGSFVAVRRISQGL+RGN TCHS+SAEVVAGSAAWLGRGLSCVCAQRRESD RPSF
Sbjct: 1   MDDRGGSFVAVRRISQGLERGNNTCHSSSAEVVAGSAAWLGRGLSCVCAQRRESDARPSF 60

Query: 60  DLTPAQEECLQRLQLRIDVAYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQG 119
           DLTP QEECLQRLQ RIDVAYDSS+PEH+EAL+ALWNAAFP+EEL  LISEQWKEMGWQG
Sbjct: 61  DLTPPQEECLQRLQSRIDVAYDSSVPEHQEALKALWNAAFPEEELHGLISEQWKEMGWQG 120

Query: 120 KDPSTDFRGGGFISLENLLYLARNFP----DLLRKQEGDRSVWEYPFAVAGVNITFMLIQ 175
           KDPSTDFRGGGFISLENLL+ ARNFP    DLL+K+EGDRSVWEYPFAVAGVNITFMLIQ
Sbjct: 121 KDPSTDFRGGGFISLENLLFFARNFPTSFQDLLQKREGDRSVWEYPFAVAGVNITFMLIQ 180

Query: 176 MLDLEAVKPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRASYMDFNTVMKST 235
           MLDLEAVKPRT+VGATFLKFL E++SAFD LYCITFKLMDH+WL MRASYMDFN VMKST
Sbjct: 181 MLDLEAVKPRTLVGATFLKFLEEDDSAFDRLYCITFKLMDHEWLDMRASYMDFNAVMKST 240

Query: 236 RRQLERELLLEDVTRLEDLPSYSLLSR 262
           RRQLERELL ED+TRLE+LPSY+LL+R
Sbjct: 241 RRQLERELLSEDITRLEELPSYTLLTR 267

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224063629|ref|XP_002301236.1| predicted protein [Populus trichocarpa] gi|222842962|gb|EEE80509.1| predicted protein [Populus trichocarpa]

 Score =  478 bits (1231), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 231/267 (86%), Positives = 248/267 (92%), Gaps = 5/267 (1%)

Query: 1   MDERGGSFVAVRRISQGLDRGN-TCHSTSAEVVAGSAAWLGRGLSCVCAQRRESDPRPSF 59
           MD+RGGSFVAVRRISQGL+RGN TCHSTSAE VAGSAAWLGRGLSCVCAQRRESD RPSF
Sbjct: 1   MDDRGGSFVAVRRISQGLERGNNTCHSTSAEAVAGSAAWLGRGLSCVCAQRRESDARPSF 60

Query: 60  DLTPAQEECLQRLQLRIDVAYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQG 119
           DLTP QEECLQRLQ RIDV YDSS+ +H+EAL+ LWNAAFP+EEL  LISEQWKEMGWQG
Sbjct: 61  DLTPVQEECLQRLQSRIDVPYDSSVLDHQEALKTLWNAAFPEEELHGLISEQWKEMGWQG 120

Query: 120 KDPSTDFRGGGFISLENLLYLARNFP----DLLRKQEGDRSVWEYPFAVAGVNITFMLIQ 175
           KDPSTDFRGGGFISLENLL+ ARNFP    DLL+K+EGDRSVWEYPFAVAGVNITFMLIQ
Sbjct: 121 KDPSTDFRGGGFISLENLLFFARNFPKSFQDLLQKREGDRSVWEYPFAVAGVNITFMLIQ 180

Query: 176 MLDLEAVKPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRASYMDFNTVMKST 235
           MLDLEAVKPR +VGATFLKFL+EN+SAFDLLYCITFKLMDH+WL MRASYMDFN VMKST
Sbjct: 181 MLDLEAVKPRALVGATFLKFLAENDSAFDLLYCITFKLMDHEWLTMRASYMDFNAVMKST 240

Query: 236 RRQLERELLLEDVTRLEDLPSYSLLSR 262
           RRQLERELL ED+TRLEDLPSY+LL+R
Sbjct: 241 RRQLERELLSEDITRLEDLPSYTLLTR 267

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18411543|ref|NP_567097.1| ELMO/CED-12 domain-containing protein [Arabidopsis thaliana] gi|30695160|ref|NP_850727.1| ELMO/CED-12 domain-containing protein [Arabidopsis thaliana] gi|145332909|ref|NP_001078320.1| ELMO/CED-12 domain-containing protein [Arabidopsis thaliana] gi|17473882|gb|AAL38361.1| putative protein [Arabidopsis thaliana] gi|20148671|gb|AAM10226.1| putative protein [Arabidopsis thaliana] gi|21536589|gb|AAM60921.1| unknown [Arabidopsis thaliana] gi|332646511|gb|AEE80032.1| ELMO/CED-12 domain-containing protein [Arabidopsis thaliana] gi|332646512|gb|AEE80033.1| ELMO/CED-12 domain-containing protein [Arabidopsis thaliana] gi|332646514|gb|AEE80035.1| ELMO/CED-12 domain-containing protein [Arabidopsis thaliana]

 Score =  461 bits (1186), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 219/266 (82%), Positives = 242/266 (90%), Gaps = 4/266 (1%)

Query: 1   MDERGGSFVAVRRISQGLDRGNTCHSTSAEVVAGSAAWLGRGLSCVCAQRRESDPRPSFD 60
           MD+RGGSFVAVRRISQGL+RG+  HS+SAEVVAGSAAWLGRGLSCVC Q R+ DPRPSFD
Sbjct: 1   MDDRGGSFVAVRRISQGLERGSVYHSSSAEVVAGSAAWLGRGLSCVCVQGRDGDPRPSFD 60

Query: 61  LTPAQEECLQRLQLRIDVAYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGK 120
           LTPAQEECLQRLQ RIDVAYDSSIP+H+EAL+ LW  AFP+EEL  ++S+QWKEMGWQGK
Sbjct: 61  LTPAQEECLQRLQSRIDVAYDSSIPQHQEALKDLWKLAFPEEELHGIVSDQWKEMGWQGK 120

Query: 121 DPSTDFRGGGFISLENLLYLARNFPD----LLRKQEGDRSVWEYPFAVAGVNITFMLIQM 176
           DPSTDFRGGGFISLENLLY AR FP     LLRKQ GDRSVWEYPFAVAG+NITFMLIQM
Sbjct: 121 DPSTDFRGGGFISLENLLYFARKFPKSFHGLLRKQVGDRSVWEYPFAVAGINITFMLIQM 180

Query: 177 LDLEAVKPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRASYMDFNTVMKSTR 236
           LDLEAVKPR++VG TFL+FLS NESAFDLLYCI FKLMD QWL+MRASYM+FNTVMKSTR
Sbjct: 181 LDLEAVKPRSIVGETFLRFLSVNESAFDLLYCIAFKLMDQQWLSMRASYMEFNTVMKSTR 240

Query: 237 RQLERELLLEDVTRLEDLPSYSLLSR 262
           RQLERE+++ED+T LEDLPSYSLLS+
Sbjct: 241 RQLEREIMIEDITSLEDLPSYSLLSQ 266

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297817322|ref|XP_002876544.1| hypothetical protein ARALYDRAFT_486497 [Arabidopsis lyrata subsp. lyrata] gi|297322382|gb|EFH52803.1| hypothetical protein ARALYDRAFT_486497 [Arabidopsis lyrata subsp. lyrata]

 Score =  460 bits (1183), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 220/266 (82%), Positives = 242/266 (90%), Gaps = 4/266 (1%)

Query: 1   MDERGGSFVAVRRISQGLDRGNTCHSTSAEVVAGSAAWLGRGLSCVCAQRRESDPRPSFD 60
           MD+RGGSFVAVRRISQGL+RG+  HS+SAEVVAGSAAWLGRGLSCVC Q R+ DPRPSFD
Sbjct: 1   MDDRGGSFVAVRRISQGLERGSVYHSSSAEVVAGSAAWLGRGLSCVCVQGRDGDPRPSFD 60

Query: 61  LTPAQEECLQRLQLRIDVAYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGK 120
           LTPAQEECLQRLQ RIDVAYDSSI +H+EAL+ LW  AFP+EEL  ++SEQWKEMGWQGK
Sbjct: 61  LTPAQEECLQRLQSRIDVAYDSSISQHQEALKDLWKLAFPEEELHGIVSEQWKEMGWQGK 120

Query: 121 DPSTDFRGGGFISLENLLYLARNFP----DLLRKQEGDRSVWEYPFAVAGVNITFMLIQM 176
           DPSTDFRGGGFISLENLLY AR FP    DLLRKQ GDRSVWEYPFAVAG+NITFMLIQM
Sbjct: 121 DPSTDFRGGGFISLENLLYFARQFPKSFQDLLRKQVGDRSVWEYPFAVAGINITFMLIQM 180

Query: 177 LDLEAVKPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRASYMDFNTVMKSTR 236
           LDLEAVKPR++VG TFL+FLS NESAFDLLYCI FKLMD QWL+MRASYM+FNTVMKSTR
Sbjct: 181 LDLEAVKPRSIVGETFLRFLSVNESAFDLLYCIAFKLMDQQWLSMRASYMEFNTVMKSTR 240

Query: 237 RQLERELLLEDVTRLEDLPSYSLLSR 262
           RQLERE+++ED+T LEDLPSYSLLS+
Sbjct: 241 RQLEREIMVEDITCLEDLPSYSLLSQ 266

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	262
TAIR|locus:2081947	266	AT3G60260 "AT3G60260" [Arabido	1.0	0.984	0.793	9.7e-112
TAIR|locus:2042456	266	AT2G44770 "AT2G44770" [Arabido	1.0	0.984	0.781	1.5e-108
TAIR|locus:2019544	281	AT1G67400 [Arabidopsis thalian	0.874	0.814	0.568	2.7e-68
TAIR|locus:2020753	265	AT1G03620 "AT1G03620" [Arabido	0.877	0.867	0.542	3.7e-64
TAIR|locus:2096389	323	AT3G03610 "AT3G03610" [Arabido	0.881	0.715	0.529	7.1e-61
TAIR|locus:2102276	213	AT3G43400 "AT3G43400" [Arabido	0.572	0.704	0.605	1.8e-46
DICTYBASE|DDB_G0278051	977	elmoA "engulfment and cell mot	0.416	0.111	0.410	3.1e-23
DICTYBASE|DDB_G0282949	618	elmoC "engulfment and cell mot	0.645	0.273	0.338	1.7e-22
DICTYBASE|DDB_G0280179	284	elmoB "engulfment and cell mot	0.568	0.524	0.341	1.2e-19
FB|FBgn0037473	316	CG10068 [Drosophila melanogast	0.606	0.503	0.329	8.3e-19

TAIR|locus:2081947 AT3G60260 "AT3G60260" [Arabidopsis thaliana (taxid:3702)]

 Score = 1103 (393.3 bits), Expect = 9.7e-112, P = 9.7e-112
 Identities = 211/266 (79%), Positives = 231/266 (86%)

Query:     1 MDERGGSFVAVRRISQGLDRGNTCHSTSAEVVAGSAAWLGRGLSCVCAQRRESDPRPSFD 60
             MD+RGGSFVAVRRISQGL+RG+  HS+SAEVVAGSAAWLGRGLSCVC Q R+ DPRPSFD
Sbjct:     1 MDDRGGSFVAVRRISQGLERGSVYHSSSAEVVAGSAAWLGRGLSCVCVQGRDGDPRPSFD 60

Query:    61 LTPAQEECLQRLQLRIDVAYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGK 120
             LTPAQEECLQRLQ RIDVAYDSSIP+H+EAL+ LW  AFP+EEL  ++S+QWKEMGWQGK
Sbjct:    61 LTPAQEECLQRLQSRIDVAYDSSIPQHQEALKDLWKLAFPEEELHGIVSDQWKEMGWQGK 120

Query:   121 DPSTDFRGGGFISLENLLYLARNFPD----LLRKQEGDRSVWEYPFAVAGVNITFMLIQM 176
             DPSTDFRGGGFISLENLLY AR FP     LLRKQ GDRSVWEYPFAVAG+NITFMLIQM
Sbjct:   121 DPSTDFRGGGFISLENLLYFARKFPKSFHGLLRKQVGDRSVWEYPFAVAGINITFMLIQM 180

Query:   177 LDLEAVKPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRASYMDFNTVMKSTX 236
             LDLEAVKPR++VG TFL+FLS NESAFDLLYCI FKLMD QWL+MRASYM+FNTVMKST 
Sbjct:   181 LDLEAVKPRSIVGETFLRFLSVNESAFDLLYCIAFKLMDQQWLSMRASYMEFNTVMKSTR 240

Query:   237 XXXXXXXXXXDVTRLEDLPSYSLLSR 262
                       D+T LEDLPSYSLLS+
Sbjct:   241 RQLEREIMIEDITSLEDLPSYSLLSQ 266

GO:0003674 "molecular_function" evidence=ND

GO:0005737 "cytoplasm" evidence=ISM

GO:0005856 "cytoskeleton" evidence=IEA

GO:0006909 "phagocytosis" evidence=IEA

TAIR|locus:2042456 AT2G44770 "AT2G44770" [Arabidopsis thaliana (taxid:3702)]

 Score = 1073 (382.8 bits), Expect = 1.5e-108, P = 1.5e-108
 Identities = 208/266 (78%), Positives = 228/266 (85%)

Query:     1 MDERGGSFVAVRRISQGLDRGNTCHSTSAEVVAGSAAWLGRGLSCVCAQRRESDPRPSFD 60
             MD+R GSFVAVRRISQGL+RG+  +S+SAE V GSAAWLGRGLSCVCAQRR+SD   +FD
Sbjct:     1 MDDREGSFVAVRRISQGLERGSVYNSSSAEAVPGSAAWLGRGLSCVCAQRRDSDANSTFD 60

Query:    61 LTPAQEECLQRLQLRIDVAYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGK 120
             LTPAQEECLQ LQ RIDVAYDS+IP H+EALR LW  +FP+EEL  LISEQWKEMGWQGK
Sbjct:    61 LTPAQEECLQSLQNRIDVAYDSTIPLHQEALRELWKLSFPEEELHGLISEQWKEMGWQGK 120

Query:   121 DPSTDFRGGGFISLENLLYLARNFP----DLLRKQEGDRSVWEYPFAVAGVNITFMLIQM 176
             DPSTDFRGGGFISLENLLY ARNF     DLLRKQ GDRSVWEYPFAVAG+N+TFMLIQM
Sbjct:   121 DPSTDFRGGGFISLENLLYFARNFQKSFQDLLRKQVGDRSVWEYPFAVAGINLTFMLIQM 180

Query:   177 LDLEAVKPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRASYMDFNTVMKSTX 236
             LDLEAVKPRT+VGATFLKFLSENESAFDLLYCI FKLMD QWL+MRASYM+FNTVMKST 
Sbjct:   181 LDLEAVKPRTIVGATFLKFLSENESAFDLLYCIAFKLMDQQWLSMRASYMEFNTVMKSTR 240

Query:   237 XXXXXXXXXXDVTRLEDLPSYSLLSR 262
                       D+  LEDLPSY+LL++
Sbjct:   241 RQLERELMLEDIMHLEDLPSYALLNQ 266

GO:0003674 "molecular_function" evidence=ND

GO:0005737 "cytoplasm" evidence=ISM

GO:0005856 "cytoskeleton" evidence=IEA

GO:0006909 "phagocytosis" evidence=IEA

TAIR|locus:2019544 AT1G67400 [Arabidopsis thaliana (taxid:3702)]

 Score = 693 (249.0 bits), Expect = 2.7e-68, P = 2.7e-68
 Identities = 133/234 (56%), Positives = 172/234 (73%)

Query:    33 AGSAAW-LGRGLSCVCAQRRESDPRPSFDLTPAQEECLQRLQLRIDVAYDSSIPEHREAL 91
             + + +W + + L+CVC  R+ +  R   +LTP QEE L+RL+ R+   YD+S P+H++AL
Sbjct:    48 SSTPSWRIKKSLTCVCFNRKRAYERICSNLTPLQEERLKRLRKRMKNYYDASRPDHQDAL 107

Query:    92 RALWNAAFPDEELRDLISEQWKEMGWQGKDPSTDFRGGGFISLENLLYLARNFPD----L 147
             RALW+A +PDE+L+DLIS+QWK MGWQGKDPSTDFRG GFISLENLL+ A+ F      L
Sbjct:   108 RALWSATYPDEKLQDLISDQWKNMGWQGKDPSTDFRGAGFISLENLLFFAKTFSTSFQRL 167

Query:   148 LRKQEGDRSVWEYPFAVAGVNITFMLIQMLDLEAVKPRTMVGATFLKFLSENESAFDLLY 207
             L KQ G R+ WEYPFAVAGVNITFM++QMLDLEA KPR+ +   FL+ LSE+E AFDLLY
Sbjct:   168 LNKQGGKRAAWEYPFAVAGVNITFMIMQMLDLEASKPRSFIRLVFLQMLSESEWAFDLLY 227

Query:   208 CITFKLMDHQWLAMRASYMDFNTVMKSTXXXXXXXXXXXDVTRLEDLPSYSLLS 261
             C+ F +MD QWL   A+YM+FN V++ T           DV R+ED+PS+SLLS
Sbjct:   228 CVAFVVMDKQWLDKNATYMEFNDVLRCTRGQLERELMMDDVFRIEDMPSFSLLS 281

GO:0005856 "cytoskeleton" evidence=IEA

GO:0006909 "phagocytosis" evidence=IEA

TAIR|locus:2020753 AT1G03620 "AT1G03620" [Arabidopsis thaliana (taxid:3702)]

 Score = 654 (235.3 bits), Expect = 3.7e-64, P = 3.7e-64
 Identities = 129/238 (54%), Positives = 168/238 (70%)

Query:    28 SAEVVAGSAAWLGRGLSCVCAQRRESDPRPSFDLTPAQEECLQRLQLRIDVAYDSSIPEH 87
             +A  + G+ +W+G GL       R  D    + L+P QEE LQRLQ R+ V +D + P+H
Sbjct:    29 TATGMVGTRSWIG-GL--FTRSNRRQDKAVDYTLSPLQEERLQRLQDRMVVPFDETRPDH 85

Query:    88 REALRALWNAAFPDEELRDLISEQWKEMGWQGKDPSTDFRGGGFISLENLLYLARNFP-- 145
             +E+L+ALWN AFP+  L  L++EQWKEMGWQG +PSTDFRG GFI+LENLL+ AR +P  
Sbjct:    86 QESLKALWNVAFPNVHLTGLVTEQWKEMGWQGPNPSTDFRGCGFIALENLLFSARTYPVC 145

Query:   146 --DLLRKQEGDRSVWEYPFAVAGVNITFMLIQMLDLEA-VKPRTMVGATFLKFLSENESA 202
                LL KQ GDR+ WEYPFAVAG+NI+FMLIQMLDL+   KP+ + G  FLK L E+E A
Sbjct:   146 FRRLLLKQRGDRAKWEYPFAVAGINISFMLIQMLDLQNNPKPKCLPGMNFLKLLEEDERA 205

Query:   203 FDLLYCITFKLMDHQWLAMRASYMDFNTVMKSTXXXXXXXXXXXDVTRLEDLPSYSLL 260
             FD+LYCI F +MD QWLAM ASYM+FN V+++T           D+ R++DLP+Y+LL
Sbjct:   206 FDVLYCIAFAMMDAQWLAMHASYMEFNEVLQATRNQLERELSLDDIHRIQDLPAYNLL 263

GO:0003674 "molecular_function" evidence=ND

GO:0005737 "cytoplasm" evidence=ISM

GO:0005856 "cytoskeleton" evidence=IEA

GO:0006909 "phagocytosis" evidence=IEA

GO:0009855 "determination of bilateral symmetry" evidence=RCA

GO:0009944 "polarity specification of adaxial/abaxial axis" evidence=RCA

GO:0010014 "meristem initiation" evidence=RCA

GO:0010075 "regulation of meristem growth" evidence=RCA

TAIR|locus:2096389 AT3G03610 "AT3G03610" [Arabidopsis thaliana (taxid:3702)]

 Score = 623 (224.4 bits), Expect = 7.1e-61, P = 7.1e-61
 Identities = 126/238 (52%), Positives = 165/238 (69%)

Query:    29 AEVVAGSAAWLGRGLSCVCAQRRESDPR--PSFDLTPAQEECLQRLQLRIDVAYDSSIPE 86
             A++V GS + +GR LS     +  +  R  P   L+  QEE L+ ++ RI++ +D S  E
Sbjct:    85 AKIVFGSGSLVGRFLSLPTFGQIGTGGRLLPP-PLSMLQEERLRNIKRRIEIPFDGSRME 143

Query:    87 HREALRALWNAAFPDEELRDLISEQWKEMGWQGKDPSTDFRGGGFISLENLLYLARNFPD 146
             H++ALR LW  A+P  EL  L SE WKEMGWQG DPSTDFRGGG+ISLENL++ A+ +P+
Sbjct:   144 HQDALRQLWRLAYPQRELPPLKSELWKEMGWQGTDPSTDFRGGGYISLENLIFFAKTYPE 203

Query:   147 ----LLRKQEGDRSVWEYPFAVAGVNITFMLIQMLDLEAVKPRTMVGATFLKFLSENESA 202
                 LL KQ+G R+ WEYPFAVAG+NI+FML QMLDL++ KP T+ G  FL FL E+E A
Sbjct:   204 SFQRLLHKQDGTRAEWEYPFAVAGINISFMLAQMLDLQSGKPSTIAGIRFLGFLEEDEMA 263

Query:   203 FDLLYCITFKLMDHQWLAMRASYMDFNTVMKSTXXXXXXXXXXXDVTRLEDLPSYSLL 260
             FD LYCI F++MD QWLA RASYM+FN V+KST           DV+ + DLP+++LL
Sbjct:   264 FDNLYCIAFQMMDAQWLARRASYMEFNDVLKSTRAQLERELALDDVSSITDLPAFNLL 321

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0005856 "cytoskeleton" evidence=IEA

GO:0006909 "phagocytosis" evidence=IEA

GO:0009407 "toxin catabolic process" evidence=RCA

GO:0009414 "response to water deprivation" evidence=RCA

GO:0009611 "response to wounding" evidence=RCA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=RCA

GO:0010583 "response to cyclopentenone" evidence=RCA

GO:0016036 "cellular response to phosphate starvation" evidence=RCA

GO:0019375 "galactolipid biosynthetic process" evidence=RCA

GO:0042538 "hyperosmotic salinity response" evidence=RCA

GO:0042631 "cellular response to water deprivation" evidence=RCA

TAIR|locus:2102276 AT3G43400 "AT3G43400" [Arabidopsis thaliana (taxid:3702)]

 Score = 487 (176.5 bits), Expect = 1.8e-46, P = 1.8e-46
 Identities = 92/152 (60%), Positives = 115/152 (75%)

Query:    82 SSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGKDPSTDFRGGGFISLENLLYLA 141
             SS P  R  ++    + + DE+L+DLIS+QWK MGWQ KDPSTDFRG GFISLENL + A
Sbjct:    58 SSTPSWR--IKKSLTSTYADEKLQDLISDQWKNMGWQRKDPSTDFRGDGFISLENLRFFA 115

Query:   142 RNFPDLLRKQEGDRSVWEYPFAVAGVNITFMLIQMLDLEAVKPRTMVGATFLKFLSENES 201
             + F  LL+KQ G R+ WEYPFAVAGVNITFM++QMLDLEA KPR+ +   FL+ LSE+E 
Sbjct:   116 KTFSRLLKKQGGKRAAWEYPFAVAGVNITFMIMQMLDLEASKPRSFIRLVFLQMLSESEW 175

Query:   202 AFDLLYCITFKLMDHQWLAMRASYMDFNTVMK 233
             AF LLYC+ F +MD QWL   A+YM+FN V++
Sbjct:   176 AFGLLYCVAFVVMDKQWLDKNATYMEFNDVLR 207

GO:0003674 "molecular_function" evidence=ND

GO:0005737 "cytoplasm" evidence=ISM

GO:0005856 "cytoskeleton" evidence=IEA

GO:0006909 "phagocytosis" evidence=IEA

DICTYBASE|DDB_G0278051 elmoA "engulfment and cell motility ELM family protein" [Dictyostelium discoideum (taxid:44689)]

 Score = 221 (82.9 bits), Expect = 3.1e-23, Sum P(2) = 3.1e-23
 Identities = 46/112 (41%), Positives = 64/112 (57%)

Query:    65 QEECLQRLQLRIDVAYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGKDPST 124
             Q    Q +  R +V ++    EH   L  LW+  +P  +L   +SEQWK+MG+QG DP T
Sbjct:   362 QRHRFQVITNRKNVTFNKESSEHDALLMKLWSLTYPGVKLESRVSEQWKQMGFQGTDPCT 421

Query:   125 DFRGGGFISLENLLYLARNFPDLLRK---QEGDRSVWEYPFAVAGVNITFML 173
             DFR  G   L+NL+Y A+N+ +  RK    + DR   EYP A AG+ +TF L
Sbjct:   422 DFRAMGIWGLDNLIYFAQNYNEKFRKIVNSQIDRKEREYPTATAGIVLTFEL 473

GO:0030864 "cortical actin cytoskeleton" evidence=IDA

GO:0050764 "regulation of phagocytosis" evidence=IMP

GO:0048870 "cell motility" evidence=IMP

GO:0045159 "myosin II binding" evidence=IPI

GO:0030837 "negative regulation of actin filament polymerization" evidence=IMP

GO:0030587 "sorocarp development" evidence=IMP

GO:0005737 "cytoplasm" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0006909 "phagocytosis" evidence=IEA

GO:0005856 "cytoskeleton" evidence=IEA

DICTYBASE|DDB_G0282949 elmoC "engulfment and cell motility ELM family protein" [Dictyostelium discoideum (taxid:44689)]

 Score = 269 (99.8 bits), Expect = 1.7e-22, P = 1.7e-22
 Identities = 62/183 (33%), Positives = 106/183 (57%)

Query:    61 LTPAQEECLQRLQLRIDVAYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGK 120
             +T  Q + ++ L  +    Y+S+ P+H E L+ LW+  +P++E +   S  WK+ G+Q  
Sbjct:   357 VTAKQSQTIKILFQKKSTIYESTNPDHEEYLKHLWSLLYPEQEFQKK-SPLWKKFGFQSD 415

Query:   121 DPSTDFRGGGFISLENLLYLARNFPDLLRK-QEGDRSVWEYPFAVAGVNIT---FMLIQM 176
             DP+ DFRG G + L NL++L ++  D +++    DR   +YPFAVAG+NI+   F + Q+
Sbjct:   416 DPTRDFRGMGIMGLLNLIHLVQHHNDWVQEILAQDR---DYPFAVAGINISNLIFEVFQI 472

Query:   177 LDLEAVKP--RTMVGATFLKFLSE----NESAFDLLYCITFKLMDHQWLAMRASYMDFNT 230
              +    +P   +   ++++  L      N+ AF+ LY + F L+DH W+ M A+YM F  
Sbjct:   473 SEDSLQQPWYSSFWSSSYMAMLCSMSRHNDHAFEELYFLIFNLLDHLWIQMNATYMMFPL 532

Query:   231 VMK 233
             V+K
Sbjct:   533 VIK 535

GO:0006909 "phagocytosis" evidence=IEA

GO:0005856 "cytoskeleton" evidence=IEA

DICTYBASE|DDB_G0280179 elmoB "engulfment and cell motility ELM family protein" [Dictyostelium discoideum (taxid:44689)]

 Score = 234 (87.4 bits), Expect = 1.2e-19, P = 1.2e-19
 Identities = 54/158 (34%), Positives = 87/158 (55%)

Query:    78 VAYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGKDPSTDFRGGGFISLENL 137
             + YD++  EH  +L  LW A  PD      +S++W  +G+QG DP+TDFRG G + L+NL
Sbjct:   116 IPYDNNNLEHEASLERLWEALLPDVRRSARLSKEWGTLGFQGMDPATDFRGMGILGLDNL 175

Query:   138 LYLARNFPDLLRK-QEGDRSVWEYPFAVAGVNITFMLIQMLDLEAVKPRTMVGATFLKFL 196
             +Y +    +  R+  +   S   YPFA+ G+NIT +++ ++D    KP   +   F K  
Sbjct:   176 IYFSTQHSEDAREILKNSNSKCCYPFAITGINITALVLNLID----KPHFKI--YFFKNG 229

Query:   197 SENESAFDLLYCITFKLMDHQWLAMRA-SYMDFNTVMK 233
             S   + F+ LY + F   D  + + +  S M+FNT+ K
Sbjct:   230 S-TLTQFNELYSLVFISFDRFYQSKKPKSIMEFNTIKK 266

GO:0006909 "phagocytosis" evidence=IEA

GO:0005856 "cytoskeleton" evidence=IEA

GO:0044351 "macropinocytosis" evidence=RCA

FB|FBgn0037473 CG10068 [Drosophila melanogaster (taxid:7227)]

 Score = 226 (84.6 bits), Expect = 8.3e-19, P = 8.3e-19
 Identities = 55/167 (32%), Positives = 81/167 (48%)

Query:    73 QLRIDVAYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGKDPSTDFRGGGFI 132
             QLR +  YDS   +H + L  LW    PD  L   +++QW+++G+QG DP TDFRG G +
Sbjct:   128 QLRAE-KYDSDNLDHEQKLLRLWQLLMPDTPLTGRVTKQWQDIGFQGDDPKTDFRGMGML 186

Query:   133 SLENLLYLARNFPDLLRKQ--EGDRSVWEYPFAVAGVNITFMLIQMLDLEAVKPR--TMV 188
              LENLLY A  + D  +            Y +A+ G+N+T M   ++   A K     +V
Sbjct:   187 GLENLLYFATAYNDAAKHVLLHSMHPTLGYTYAIVGINLTSMAFNLVKTGAAKTHFYNLV 246

Query:   189 GATFLKFLSENESAFDLLYCITFKLMDHQWLAMRA-SYMDFNTVMKS 234
                   F +  +  F  LYC  F   D  W+     + MDF  + +S
Sbjct:   247 VQHRQDFSTVED--FHKLYCYLFFEFDRFWMESDPRNIMDFREIYQS 291

GO:0006909 "phagocytosis" evidence=IEA

GO:0005856 "cytoskeleton" evidence=IEA

GO:0000910 "cytokinesis" evidence=IMP

GO:0090175 "regulation of establishment of planar polarity" evidence=IMP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	262
pfam04727	170	pfam04727, ELMO_CED12, ELMO/CED-12 family	3e-67

>gnl|CDD|218231 pfam04727, ELMO_CED12, ELMO/CED-12 family

 Score =  205 bits (524), Expect = 3e-67
 Identities = 72/171 (42%), Positives = 95/171 (55%), Gaps = 5/171 (2%)

Query: 67  ECLQRLQLRIDVAYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGKDPSTDF 126
             L  L+      +D   PEHR  L+ LW A FPDE L   +SE+WK++G+QG DP+TDF
Sbjct: 1   LTLNLLEKLRKTPFDLENPEHRRLLKTLWKALFPDEPLSSRVSEKWKDLGFQGDDPATDF 60

Query: 127 RGGGFISLENLLYLARNFPD----LLRKQEGDRSVWEYPFAVAGVNITFMLIQMLDLEAV 182
           RG G + L NLLY A N+PD    LL +     +  EYPFAVA +N+T ML ++L +  +
Sbjct: 61  RGTGLLGLLNLLYFAENYPDEFQKLLLESSHRPAEHEYPFAVASINVTSMLYELLRIGKL 120

Query: 183 KPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRASYMDFNTVMK 233
                    F         AF+ LYC  F L D  W  MRA+ MDFN V++
Sbjct: 121 DQEDYKNYGF-PLFFPTLLAFEELYCALFHLFDRFWKEMRATIMDFNKVLE 170

This family represents a conserved domain which is found in a number of eukaryotic proteins including CED-12, ELMO I and ELMO II. ELMO1 is a component of signalling pathways that regulate phagocytosis and cell migration and is the mammalian orthologue of the C. elegans gene, ced-12. CED-12 is required for the engulfment of dying cells and cell migration. In mammalian cells, ELMO1 interacts with Dock180 as part of the CrkII/Dock180/Rac pathway responsible for phagocytosis and cell migration. ELMO1 is ubiquitously expressed, although its expression is highest in the spleen, an organ rich in immune cells. ELMO1 has a PH domain and a polyproline sequence motif at its C terminus which are not present in this alignment. Length = 170

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	262
KOG2998	302	consensus Uncharacterized conserved protein [Funct	100.0
PF04727	170	ELMO_CED12: ELMO/CED-12 family; InterPro: IPR00681	100.0
KOG2999	713	consensus Regulator of Rac1, required for phagocyt	99.96

>KOG2998 consensus Uncharacterized conserved protein [Function unknown]

Probab=100.00  E-value=2.8e-66  Score=467.17  Aligned_cols=255  Identities=51%  Similarity=0.827  Sum_probs=237.8

Q ss_pred             CCCCCCceEEEe-eccCCCCCCCccCCCcchhhccchhhhcc-----ccccccccccCCCCCCCCCCCHHHHHHHHHHHH
Q 024804            1 MDERGGSFVAVR-RISQGLDRGNTCHSTSAEVVAGSAAWLGR-----GLSCVCAQRRESDPRPSFDLTPAQEECLQRLQL   74 (262)
Q Consensus         1 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~L~~~Q~~~L~~L~~   74 (262)
                      |++..|..++|+ +.|.+.+-...-+.++.+...|+.+|+|+     ++.|.|...+..+...|..+.+.|+++++.+++
T Consensus        37 ~~~~~g~~ra~~~e~sl~~~~~~~~~~ass~~~~~~~~~~~~v~~~~~i~~~~~~~r~~~~~~~~~~~~~~~~l~~~~e~  116 (302)
T KOG2998|consen   37 TDAYEGASRAVRTETSLGQEKPLLGSTASSEAPPGLISFLGRVMVDKGIKNIVDPNRRIDLAACRHLIPGYRELLQRLEE  116 (302)
T ss_pred             hcCCCCCcceeecchhhhhhhhhhhcccccccChhhhhhhHHHHHHhccccCCCcccchhhhhccccccCcHHHHHHHHH
Confidence            467889999999 78888888888888999999999999999     999999999999999999999999999999999


Q ss_pred             hhcccCCCCCHHHHHHHHHHHHHhCCCcccchhhhhhHhHhcCCCCCCCCCCCcchhhhHhHHHHHHHhcH----HHHHH
Q 024804           75 RIDVAYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGKDPSTDFRGGGFISLENLLYLARNFP----DLLRK  150 (262)
Q Consensus        75 ~~~~~~D~~n~~H~~~L~~Lw~~~~p~~~~~~~~~~~Wk~lGFQg~dP~TDFRg~GiLgL~~LlyF~~~~~----~ll~~  150 (262)
                      ++++|||.+|++|+++|++||+.++|+++++++++++|++|||||+||+|||||+|+|||+||+||+++||    +++++
T Consensus       117 ~~~~~yDs~n~~H~e~L~~lwk~~~p~~~l~~lvs~qW~emGfQG~dPsTDFRG~GfL~LeNLlyFa~~~~~~aq~lL~~  196 (302)
T KOG2998|consen  117 LRQEPYDSDNPDHEELLLDLWKLLYPDKELPGLVSKQWKEMGFQGADPSTDFRGMGFLGLENLLYFARTYPTSAQRLLLK  196 (302)
T ss_pred             HHhccCCCCChhHHHHHHHHHHHhCCCCccchhHHHHHHHhccCCCCCCcccccchHHHHHHHHHHHHhhhHHHHHHHHh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999    67777


Q ss_pred             hhCCCCCCCCchHHHhHHHHHHHHHHhhhccCCCc-cccccchhcccccchhhHHHHHHHHHHHHHHHHHhCCCCcccHH
Q 024804          151 QEGDRSVWEYPFAVAGVNITFMLIQMLDLEAVKPR-TMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRASYMDFN  229 (262)
Q Consensus       151 ~~s~~~~~~yPFAvagINiT~~L~~~L~~~~~~~~-~~~~~~f~~ll~~~~~~F~eLy~~~F~~f~~~W~~~~at~mdF~  229 (262)
                      +  +++.|+|||||||||||+|++++|++++++.. ++....|     +++.+|+.|||++|..||++|+++++||||||
T Consensus       197 s--~~~r~eYpfAVvgINIT~m~~qmL~~eal~~~~~~~~~~~-----~~~~~F~~lYc~af~~~d~~Wl~~~~simefn  269 (302)
T KOG2998|consen  197 S--RHPRWEYPFAVVGINITFMAIQMLDLEALKKHFNNIVKVF-----ETEPAFDLLYCYAFLEFDKQWLEQRATIMEFN  269 (302)
T ss_pred             c--CCCccCCceEEEeecHHHHHHHHHHhhhcccccccccccc-----ccHHHHHHHHHHHHHHHHHHHHHhhccHHHHH
Confidence            5  56779999999999999999999999998543 3333333     78899999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhhcccCcCCcCCCCCcccccC
Q 024804          230 TVMKSTRRQLERELLLEDVTRLEDLPSYSLLSR  262 (262)
Q Consensus       230 ~Vl~~~r~qL~r~L~~~~~~~i~d~~~~~~~~~  262 (262)
                      .|++++|.|++++|++.|+..++|+|+|++|.+
T Consensus       270 ~Vlk~~~~qler~L~~~d~~~~~~lp~~~~L~~  302 (302)
T KOG2998|consen  270 TVLKSFRRQLERELSLDDVLLITDLPAFNLLLQ  302 (302)
T ss_pred             HHHHHHHHHHHHhhhhhhhcccccchhhhhhcC
Confidence            999999999999999999999999999999964

>PF04727 ELMO_CED12: ELMO/CED-12 family; InterPro: IPR006816 This entry represents the ELMO (EnguLfment and Cell MOtility) domain, which is found in a number of eukaryotic proteins involved in the cytoskeletal rearrangements required for phagocytosis of apoptotic cells and cell motility, including CED-12, ELMO-1 and ELMO-2

Probab=100.00  E-value=3.4e-48  Score=329.50  Aligned_cols=164  Identities=43%  Similarity=0.767  Sum_probs=145.5

Q ss_pred             HHHHHHHhhcccCCCCCHHHHHHHHHHHHHhCCCcccchhhhhhHhHhcCCCCCCCCCCCcchhhhHhHHHHHHHhcH--
Q 024804           68 CLQRLQLRIDVAYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGKDPSTDFRGGGFISLENLLYLARNFP--  145 (262)
Q Consensus        68 ~L~~L~~~~~~~~D~~n~~H~~~L~~Lw~~~~p~~~~~~~~~~~Wk~lGFQg~dP~TDFRg~GiLgL~~LlyF~~~~~--  145 (262)
                      .|+.|++++++|||++|++|+++|++||++++|+.+.+++.+++|++|||||+||+|||||+|+|||+||+||+++||  
T Consensus         2 ~l~~l~~~~~~~~d~~~~~h~~~L~~Lw~~~~~~~~~~~~~~~~W~~lGFQ~~dP~tDFR~~G~LgL~~L~yf~~~~~~~   81 (170)
T PF04727_consen    2 TLNLLRALAKTPFDPENPEHEELLQELWNALFPDEPPFSRISEHWKELGFQGEDPATDFRGMGLLGLDCLLYFAENYPDE   81 (170)
T ss_pred             hHHHHHHHHcCCCCCCCHHHHHHHHHHHHHhCCCCccCCcCccHHHHhCCCCCCcHHHHhhhhHHHHHHHHHHHHHChHH
Confidence            578899999999999999999999999999999988889999999999999999999999999999999999999999  


Q ss_pred             --HHHHHhhCCCCCCCCchHHHhHHHHHHHHHHhhhccCCCccccccchhcc-cccchhhHHHHHHHHHHHHHHHHHhCC
Q 024804          146 --DLLRKQEGDRSVWEYPFAVAGVNITFMLIQMLDLEAVKPRTMVGATFLKF-LSENESAFDLLYCITFKLMDHQWLAMR  222 (262)
Q Consensus       146 --~ll~~~~s~~~~~~yPFAvagINiT~~L~~~L~~~~~~~~~~~~~~f~~l-l~~~~~~F~eLy~~~F~~f~~~W~~~~  222 (262)
                        +++.++..+.+..+||||+||||||.+|+++|+++...+....  .+... +.+.+.+|++|||++|..|+++|++++
T Consensus        82 ~~~~l~~~~~~~~~~~~Pfa~~~invt~~l~~~l~~~~~~~~~~~--~~~~~~~~~~~~~f~elf~~~f~~f~~~W~~~~  159 (170)
T PF04727_consen   82 FRRILREQSSRSDENWYPFAVASINVTSLLCELLKLGALDSEFYK--RINFLSFFSSLEAFEELFCACFQLFDRTWKEMN  159 (170)
T ss_pred             HHHHHHHccCcccccccHHHHHHHHHHHHHHHHHhhcccCHHHhh--cccccccCccHHHHHHHHHHHHHHHHHHHccCC
Confidence              4666766655567999999999999999999999765433332  21111 467789999999999999999999999


Q ss_pred             CCcccHHHHHH
Q 024804          223 ASYMDFNTVMK  233 (262)
Q Consensus       223 at~mdF~~Vl~  233 (262)
                      +++|||++|++
T Consensus       160 at~~dF~~V~~  170 (170)
T PF04727_consen  160 ATIMDFNKVLK  170 (170)
T ss_pred             CCHHHHHhhcC
Confidence            99999999975

ELMO-1 and ELMO-2 are components of signalling pathways that regulate phagocytosis and cell migration and are mammalian orthologues of the Caenorhabditis elegans gene, ced-12 that is required for the engulfment of dying cells and cell migration. ELMO-1/2 act in association with DOCK1 and CRK. ELMO-1/2 interact with the SH3-domain of DOCK1 via an SH3-binding site to enhance the guanine nucleotide exchange factor (GEF) activity of DOCK1. ELMO-1/2 could be part of a complex with DOCK1 and Rac1 that could be required to activate Rac Rho small GTPases. Regulatory GTPases in the Ras superfamily employ a cycle of alternating GTP binding and hydrolysis, controlled by guanine nucleotide exchange factors and GTPase-activating proteins (GAPs), as essential features of their actions in cells. Within the Ras superfamily, the Arf family is composed of 30 members, including 22 Arf-like (Arl) proteins. The ELMO domain has been proposed to be a GAP domain for ARL2 and other members of the Arf family [].; GO: 0006909 phagocytosis, 0005856 cytoskeleton

>KOG2999 consensus Regulator of Rac1, required for phagocytosis and cell migration [Signal transduction mechanisms]

Probab=99.96  E-value=4.9e-29  Score=240.12  Aligned_cols=195  Identities=28%  Similarity=0.495  Sum_probs=176.3

Q ss_pred             CCCCCHHHHHHHHHHHHhhcccCCCCCHHHHHHHHHHHHHhCCCccc-----------chhhhhhHhHhcCCC-CCCCCC
Q 024804           58 SFDLTPAQEECLQRLQLRIDVAYDSSIPEHREALRALWNAAFPDEEL-----------RDLISEQWKEMGWQG-KDPSTD  125 (262)
Q Consensus        58 ~~~L~~~Q~~~L~~L~~~~~~~~D~~n~~H~~~L~~Lw~~~~p~~~~-----------~~~~~~~Wk~lGFQg-~dP~TD  125 (262)
                      ..+|+.+|...+..+..|+.++.|+.+.+..+.++++-..+|.++..           .....+..|.+||-. .||+.|
T Consensus       275 ~~~lyvlq~L~~glle~Rm~~~md~~~q~qr~~i~~lr~iaf~~~~~~~~~g~~~e~rk~l~~~~ykklgf~n~~npa~d  354 (713)
T KOG2999|consen  275 PIQLYVLQVLTLGLLEVRMRTKMDPQDQVQRELISELRRIAFDDESEPSRRGGGAEVRKILDIESYKKLGFENRINPAQD  354 (713)
T ss_pred             hHHHHHHHHHHHhhhHHhhhcccchhhHHHHHHHHHHHhcCcccccccccCCcchhhhhhhhHHHHHhhcccccCChHHh
Confidence            35789999999999999999999999999999999999999876421           245678999999999 999999


Q ss_pred             CC--cchhhhHhHHHHHHHhcH----HHHHHhhCCCCCCCCchHHHhHHHHHHHHHHhhhccCCCccccccchhcccccc
Q 024804          126 FR--GGGFISLENLLYLARNFP----DLLRKQEGDRSVWEYPFAVAGVNITFMLIQMLDLEAVKPRTMVGATFLKFLSEN  199 (262)
Q Consensus       126 FR--g~GiLgL~~LlyF~~~~~----~ll~~~~s~~~~~~yPFAvagINiT~~L~~~L~~~~~~~~~~~~~~f~~ll~~~  199 (262)
                      |-  ..|+|+|+||+|||++||    +++.++.++.+.++|||+.++|.+|.|||++|+.+.+  .......|.+++|.+
T Consensus       355 f~etppG~LAldnMvyFA~~~~~~y~riVlENSsRedkhecpfgr~sieltk~lcEilrVge~--p~E~~~df~pmfFth  432 (713)
T KOG2999|consen  355 FGETPPGRLALDNMVYFARNSPQDYRRIVLENSSREDKHECPFGRMSIELTKILCELLRVGEP--PDELDRDFIPMFFTH  432 (713)
T ss_pred             cccCCchHHHHHHHHHHHHhCHHHHHHHHHhcccccccCcCCcCccHHHHHHHHHHHHhcCCC--chhhcCccceeeecC
Confidence            97  779999999999999999    6899999999999999999999999999999999763  444456799999999


Q ss_pred             hhhHHHHHHHHHHHHHHHHHhCCCCcccHHHHHHHHHHHHHHhhcccCcCCcCCCC
Q 024804          200 ESAFDLLYCITFKLMDHQWLAMRASYMDFNTVMKSTRRQLERELLLEDVTRLEDLP  255 (262)
Q Consensus       200 ~~~F~eLy~~~F~~f~~~W~~~~at~mdF~~Vl~~~r~qL~r~L~~~~~~~i~d~~  255 (262)
                      +..|+++||+|.++|+++|++|+||-.||++|+.+||+||.|+|..+ +++++++.
T Consensus       433 d~~Fee~FciciqLlnkTWKEMrAt~edf~KVmqVVrEQl~r~L~~k-p~sld~fk  487 (713)
T KOG2999|consen  433 DTPFEELFCICVQLLNRTWKEMRATAEDFEKVMQVVREQLRRALKRK-PQSLDQFK  487 (713)
T ss_pred             CCcHHHHHHHHHHHHHhHHHHHHhhhhhHHHHHHHHHHHHHHHhccC-CccHHHHH
Confidence            99999999999999999999999999999999999999999999976 77777654

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	262
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	4e-05

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 43.7 bits (102), Expect = 4e-05
 Identities = 44/289 (15%), Positives = 83/289 (28%), Gaps = 83/289 (28%)

Query: 39  LGRGLSCVCAQR-RESDPRPSFD-----LTPAQEEC-------LQRLQLRIDVAYDS--- 82
           LG G + V          +   D     L              LQ+L  +ID  + S   
Sbjct: 159 LGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSD 218

Query: 83  ---SIPEHREAL--------------RAL------WNA----AFPDEELRDLISEQWKE- 114
              +I     ++                L       NA    AF +   + L++ ++K+ 
Sbjct: 219 HSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAF-NLSCKILLTTRFKQV 277

Query: 115 ----MGWQGKDPSTDFRGGGFISLENLLYLARNF---PDLLRKQEGDRSVWEYPFAVAGV 167
                       S D         E    L +     P  L ++    +    P  ++ +
Sbjct: 278 TDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTN----PRRLSII 333

Query: 168 -------NITFMLIQMLDLEAVKPRTMVGATFLKFLSENE--SAFDLLYC------ITFK 212
                    T+   + ++ + +    +   + L  L   E    FD L        I   
Sbjct: 334 AESIRDGLATWDNWKHVNCDKLT-TII--ESSLNVLEPAEYRKMFDRLSVFPPSAHIPTI 390

Query: 213 LMDHQWLAMRASYMDFNTVMKSTRRQLERELLLEDVTRLEDLPSYSLLS 261
           L+   W       +  + VM     +L +  L+E   +     + S+ S
Sbjct: 391 LLSLIW-----FDVIKSDVMVVV-NKLHKYSLVE---KQPKESTISIPS 430

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00