Citrus Sinensis ID: 024877

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-
Protein Sequence
MDERGGSFVAVRRISQGLDRGNTCHSTSGSAAWLGRGLSCVCAQRRESDPRPSFDLTPAQEECLQRLQLRIDVAYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGKDPSTDFRGGGFISLENLLYLARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFMLIQMLDLEAVKPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRASYMDFNTVMKSTRRQLERELLLEDVTRLEDLPSYSLLSR
Secondary Structure (PSIPRED)
ccccccHHHHHHHHHHcccccccccccccccHHHHccHHHHHHHcccccccccccccHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHccccccccccHHHHHHccccccccccccccccHHHHHHHHHHHHHcHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccEEEEEEEcccccccccccEEcccHHHHHHHHHHHHHccccccHHHcccHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHcccccccHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHcHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHcccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHccccccHcccccHHHHcc
Coil and Loop (DISEMBL)
MDERGGSFVAVRRIsqgldrgntchstsgsaaWLGRGLSCVCaqrresdprpsfdltpAQEECLQRLQLRIdvaydssiPEHREALRALWNAAFPDEELRDLISEQWKemgwqgkdpstdfrgggfiSLENLLYLARNFPKSFQDLLRkqegdrsvweypfavagVNITFMLIQMLdleavkprtMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRASYMDFNTVMKSTRRQLERELLLEDVtrledlpsysllsr
Flexible Loop (DISEMBL)
MDERGGSFVAVRRisqgldrgntchstsgsaawlgRGLSCVCAQRRESDprpsfdltpAQEECLQRLQLRIDVAYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGKDPSTDFRGGGFISLENLLYLARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFMLIQMLDLEAVKPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRASYMDFNTVMKSTRRQLEREllledvtrledlpsysllsr
Low Complexity Region (SEG)
MDERGGSFVAVRRISQGLDRGNTCHSTSGSAAWLGRGLSCVCAQRRESDPRPSFDLTPAQEECLQRLQLRIDVAYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGKDPSTDFRGGGFISLENLLYLARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFMLIQMLDLEAVKPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRASYMDFNTVMKSTrrqlerellleDVTRLEDLPSYSLLSR
Disordered region (IsUnstruct)
*********AVRRI*******NTCHSTSGSAAWLGRGLSCVCA******************ECLQRLQLRIDVAYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGKDPSTDFRGGGFISLENLLYLARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFMLIQMLDLEAVKPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRASYMDFNTVMKSTRRQLERELLLEDV**************
Disordered Region (DISOPRED)
******S**AVRRISQ***********SGSAAWLGRGLSCVC************DLTPAQEECLQRLQLRIDVAYDSSIPEHREALRALWNAAF*************KEMGWQGKDPSTDFRGGGFISLENLLYLARNFPKSFQDLLR*****RSVWEYPFAVAGVNITFMLIQMLDLEAVKPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRASYMDFNTVMKSTRRQLERELLLEDVTRLEDLPSYSLLSR
Disordered Region (DISEMBL)
MDERGGSFVAVRRISQGLDRGNTCHSTSGSAAWLGRGLSCVCAQR********FDLTPAQEECLQRLQLRIDVAYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGKDPSTDFRGGGFISLENLLYLARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFMLIQMLDLEAVKPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRASYMDFNTVMKSTRRQLERELLLEDVTRLEDLPSYSLLSR
Disordered Region (DISPRO)
*****GSFVAVRRISQGLDRGNTCHSTSGSAAWLGRGLSCVCAQRRESDPRPSFDLTPAQEECLQRLQLRIDVAYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGKDPSTDFRGGGFISLENLLYLARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFMLIQMLDLEAVKPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRASYMDFNTVMKSTRRQLERELLLEDVTRLEDLPSYSLLSR
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
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Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MDERGGSFVAVRRISQGLDRGNTCHSTSGSAAWLGRGLSCVCAQRRESDPRPSFDLTPAQEECLQRLQLRIDVAYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGKDPSTDFRGGGFISLENLLYLARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFMLIQMLDLEAVKPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRASYMDFNTVMKSTRRQLERELLLEDVTRLEDLPSYSLLSR
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	261	2.2.26 [Sep-21-2011]
Q54YW1	977	ELMO domain-containing pr	yes	no	0.716	0.191	0.313	2e-25
Q54RS7	618	ELMO domain-containing pr	no	no	0.674	0.284	0.338	1e-23
Q54UP9	1267	Ankyrin repeat and ELMO d	no	no	0.613	0.126	0.306	5e-19
Q54VR8	284	ELMO domain-containing pr	no	no	0.574	0.528	0.316	3e-18
Q08DZ3	293	ELMO domain-containing pr	yes	no	0.758	0.675	0.299	2e-17
Q8IZ81	293	ELMO domain-containing pr	yes	no	0.524	0.467	0.335	2e-17
Q499U2	720	Engulfment and cell motil	yes	no	0.689	0.25	0.276	2e-16
A6QR40	652	Engulfment and cell motil	no	no	0.678	0.271	0.270	4e-16
Q8BGF6	293	ELMO domain-containing pr	yes	no	0.567	0.505	0.335	7e-16
Q96BJ8	720	Engulfment and cell motil	no	no	0.689	0.25	0.266	9e-16

>sp|Q54YW1|ELMOA_DICDI ELMO domain-containing protein A OS=Dictyostelium discoideum GN=elmoA PE=1 SV=1

 Score =  116 bits (290), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 67/214 (31%), Positives = 102/214 (47%), Gaps = 27/214 (12%)

Query: 60  QEECLQRLQLRIDVAYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGKDPST 119
           Q    Q +  R +V ++    EH   L  LW+  +P  +L   +SEQWK+MG+QG DP T
Sbjct: 362 QRHRFQVITNRKNVTFNKESSEHDALLMKLWSLTYPGVKLESRVSEQWKQMGFQGTDPCT 421

Query: 120 DFRGGGFISLENLLYLARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFML---IQML 176
           DFR  G   L+NL+Y A+N+ + F+ ++  Q  DR   EYP A AG+ +TF L   I  +
Sbjct: 422 DFRAMGIWGLDNLIYFAQNYNEKFRKIVNSQI-DRKEREYPTATAGIVLTFELYNSIFKM 480

Query: 177 DLEAVKPRTMVGAT---------------FLKFLSENESAFDLLYCITFKLMDHQWLAMR 221
               + P     +                F      +  AF+ +YC TF+++D  W  M 
Sbjct: 481 GTPNLNPYNSTTSNTTSNTTSTTNIDDLPFFPLFFSHPHAFEEVYCTTFQILDSTWDDMN 540

Query: 222 ASYMDFNTVMKSTRRQLERELLLEDVTRLEDLPS 255
            +YM F  +M S +  +        +T LE  P+
Sbjct: 541 GTYMHFQKIMSSVKNLI--------ITALESKPT 566

Functions as a negative regulator of actin polymerization. Modulates actin/myosin II at cortex actinomyosins to prevent excessive F-actin polymerization around the cell periphery, thereby maintaining proper cell shape during phagocytosis and chemotaxis.
Dictyostelium discoideum (taxid: 44689)

>sp|Q54RS7|ELMOC_DICDI ELMO domain-containing protein C OS=Dictyostelium discoideum GN=elmoC PE=4 SV=1

 Score =  110 bits (275), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 65/192 (33%), Positives = 105/192 (54%), Gaps = 16/192 (8%)

Query: 56  LTPAQEECLQRLQLRIDVAYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGK 115
           +T  Q + ++ L  +    Y+S+ P+H E L+ LW+  +P++E +   S  WK+ G+Q  
Sbjct: 357 VTAKQSQTIKILFQKKSTIYESTNPDHEEYLKHLWSLLYPEQEFQKK-SPLWKKFGFQSD 415

Query: 116 DPSTDFRGGGFISLENLLYLARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNIT---FML 172
           DP+ DFRG G + L NL++L ++     Q++L +   DR   +YPFAVAG+NI+   F +
Sbjct: 416 DPTRDFRGMGIMGLLNLIHLVQHHNDWVQEILAQ---DR---DYPFAVAGINISNLIFEV 469

Query: 173 IQMLDLEAVKPRTMVG------ATFLKFLSENESAFDLLYCITFKLMDHQWLAMRASYMD 226
            Q+ +    +P           A        N+ AF+ LY + F L+DH W+ M A+YM 
Sbjct: 470 FQISEDSLQQPWYSSFWSSSYMAMLCSMSRHNDHAFEELYFLIFNLLDHLWIQMNATYMM 529

Query: 227 FNTVMKSTRRQL 238
           F  V+K  + QL
Sbjct: 530 FPLVIKKLKSQL 541

Dictyostelium discoideum (taxid: 44689)

>sp|Q54UP9|ELMOD_DICDI Ankyrin repeat and ELMO domain-containing protein D OS=Dictyostelium discoideum GN=elmoD PE=4 SV=1

 Score = 94.7 bits (234), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 54/176 (30%), Positives = 92/176 (52%), Gaps = 16/176 (9%)

Query: 64  LQRLQLRIDVAYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGKDPSTDFRG 123
           +Q L +     Y+   P H+  L  LW+  FP++  +    E W+ +G+Q KDPS+DFRG
Sbjct: 290 IQGLIMDSKTPYNKDEPSHQRLLETLWSTLFPNQVFQR-SHENWQIIGFQNKDPSSDFRG 348

Query: 124 GGFISLENLLYLARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFMLIQMLDLEAVKP 183
            G   L++L+YLA+N    F + L  ++ + +   YP+A +G+ +T  L+     E VKP
Sbjct: 349 MGLAGLKHLIYLAQNHKDMFMNPLINRQPEANY--YPYATSGIQVTSFLV-----ECVKP 401

Query: 184 -------RTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRASYMDFNTVMK 232
                    ++G  +   L E+E+A + +YC+  ++    W    A+YM F  V +
Sbjct: 402 INISANHSDVIGQIY-PILFESENALNEIYCVLMEIFGIVWKDWNATYMIFQKVFQ 456

Dictyostelium discoideum (taxid: 44689)

>sp|Q54VR8|ELMOB_DICDI ELMO domain-containing protein B OS=Dictyostelium discoideum GN=elmoB PE=4 SV=1

 Score = 92.4 bits (228), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 51/161 (31%), Positives = 86/161 (53%), Gaps = 11/161 (6%)

Query: 73  VAYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGKDPSTDFRGGGFISLENL 132
           + YD++  EH  +L  LW A  PD      +S++W  +G+QG DP+TDFRG G + L+NL
Sbjct: 116 IPYDNNNLEHEASLERLWEALLPDVRRSARLSKEWGTLGFQGMDPATDFRGMGILGLDNL 175

Query: 133 LYLARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFMLIQMLDLEAVKPRTMVGATFL 192
           +Y +    +  +++L+      S   YPFA+ G+NIT +++ ++D    K       + L
Sbjct: 176 IYFSTQHSEDAREILK---NSNSKCCYPFAITGINITALVLNLIDKPHFKIYFFKNGSTL 232

Query: 193 KFLSENESAFDLLYCITFKLMDHQWLAMR-ASYMDFNTVMK 232
                  + F+ LY + F   D  + + +  S M+FNT+ K
Sbjct: 233 -------TQFNELYSLVFISFDRFYQSKKPKSIMEFNTIKK 266

Dictyostelium discoideum (taxid: 44689)

>sp|Q08DZ3|ELMD2_BOVIN ELMO domain-containing protein 2 OS=Bos taurus GN=ELMOD2 PE=1 SV=1

 Score = 89.7 bits (221), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 65/217 (29%), Positives = 100/217 (46%), Gaps = 19/217 (8%)

Query: 40  CVCAQRRESDPRPSFD--LTPAQEECLQRL----QLRIDV------AYDSSIPEHREALR 87
           CV    +E +  P  D       + CL ++    QL +DV       YDS   +H + L 
Sbjct: 73  CVEDIMKEKNINPEKDASFKICMKACLLQISGYKQLYLDVESVRKKPYDSDNLQHEKLLI 132

Query: 88  ALWNAAFPDEELRDLISEQWKEMGWQGKDPSTDFRGGGFISLENLLYLARNFPKSFQDLL 147
            LWN   P ++L+  IS+QW ++G+QG DP TDFRG G + L NL+Y + N+      +L
Sbjct: 133 KLWNLLMPTKKLKARISKQWADIGFQGDDPKTDFRGMGILGLINLVYFSENYTSEAHQIL 192

Query: 148 RKQEGDRSVWEYPFAVAGVNITFMLIQMLDLEAVKPRTMVGATFLKFLSENESAFDLLYC 207
            +    +    Y +A+ G+N+T M   +L  EA+K        F+  +   E  F   YC
Sbjct: 193 SRSNHPKL--GYSYAIVGINLTEMAYSLLKSEALKFHLY---NFVPGIPTMEH-FHQFYC 246

Query: 208 ITFKLMDHQWLAMRA-SYMDFNTVMKSTRRQLERELL 243
                 D  W   +  S M FN   +    +++  LL
Sbjct: 247 YLVYEFDKFWFEEKPESIMYFNVYREKFHEKIKGLLL 283

Acts as a GTPase-activating protein (GAP) toward guanine nucleotide exchange factors like ARL2, ARL3, ARF1 and ARF6, but not for GTPases outside the Arf family.

Bos taurus (taxid: 9913)

>sp|Q8IZ81|ELMD2_HUMAN ELMO domain-containing protein 2 OS=Homo sapiens GN=ELMOD2 PE=1 SV=1

 Score = 89.7 bits (221), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 50/149 (33%), Positives = 76/149 (51%), Gaps = 12/149 (8%)

Query: 44  QRRESDPRPSFDLTPAQEECLQRL----QLRIDV------AYDSSIPEHREALRALWNAA 93
           + +  +P          + CL ++    QL +DV       YDS   +H E L  LWN  
Sbjct: 79  KEKNINPEKDASFKICMKMCLLQITGYKQLYLDVESVRKRPYDSDNLQHEELLMKLWNLL 138

Query: 94  FPDEELRDLISEQWKEMGWQGKDPSTDFRGGGFISLENLLYLARNFPKSFQDLLRKQEGD 153
            P ++L   IS+QW E+G+QG DP TDFRG G + L NL+Y + N+      +L +    
Sbjct: 139 MPTKKLNARISKQWAEIGFQGDDPKTDFRGMGILGLINLVYFSENYTSEAHQILSRSNHP 198

Query: 154 RSVWEYPFAVAGVNITFMLIQMLDLEAVK 182
           +    Y +A+ G+N+T M   +L  EA+K
Sbjct: 199 KL--GYSYAIVGINLTEMAYSLLKSEALK 225

Acts as a GTPase-activating protein (GAP) toward guanine nucleotide exchange factors like ARL2, ARL3, ARF1 and ARF6, but not for GTPases outside the Arf family. Regulates IFN-related antiviral responses.

Homo sapiens (taxid: 9606)

>sp|Q499U2|ELMO3_RAT Engulfment and cell motility protein 3 OS=Rattus norvegicus GN=Elmo3 PE=2 SV=1

 Score = 86.3 bits (212), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 54/195 (27%), Positives = 95/195 (48%), Gaps = 15/195 (7%)

Query: 67  LQLRIDVAYDSSIPEHREALRALWNAAF-PDEEL----------RDLISEQWKEMGWQGK 115
           L+ R+    D    E RE L+AL  AAF PD E           R L   +++++G+   
Sbjct: 293 LEPRMRTPLDPYSQEQREQLQALRQAAFEPDGESLGTGLSADRRRSLCVREFRKLGFSNS 352

Query: 116 DPSTDFR--GGGFISLENLLYLARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFMLI 173
            P+ D      G ++L+N+LY +R+ P ++   + +        E PFA + + +T +L 
Sbjct: 353 SPAQDLERVPPGLLALDNMLYFSRHAPSAYSRFVLENSSREDKHECPFARSSIQLTVLLC 412

Query: 174 QMLDLEAVKPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRASYMDFNTVMKS 233
           ++L +   +P +     F       + +F  L+C+  +L++  W  MRA+  DF+ VM+ 
Sbjct: 413 ELLHVG--EPCSETAQDFSPMFFSQDHSFHELFCVAIQLLNKTWKEMRATQEDFDKVMQV 470

Query: 234 TRRQLERELLLEDVT 248
            R QL R L L+  +
Sbjct: 471 VREQLARTLALKPTS 485

Involved in cytoskeletal rearrangements required for phagocytosis of apoptotic cells and cell motility. Acts in assocation with DOCK1 and CRK. Was initially proposed to be required in complex with DOCK1 to activate Rac Rho small GTPases. May enhance the guanine nucleotide exchange factor (GEF) activity of DOCK1.

Rattus norvegicus (taxid: 10116)

>sp|A6QR40|ELMO3_BOVIN Engulfment and cell motility protein 3 OS=Bos taurus GN=ELMO3 PE=2 SV=1

 Score = 85.1 bits (209), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 52/192 (27%), Positives = 93/192 (48%), Gaps = 15/192 (7%)

Query: 67  LQLRIDVAYDSSIPEHREALRALWNAAFPDE-----------ELRDLISEQWKEMGWQGK 115
           L+ R+    D    E RE L+AL  AAF  E             R L + +++++G+   
Sbjct: 293 LEPRMRTPLDPYSQEQREQLQALRQAAFEPEGESVGAGLSADRRRSLCAREFRKLGFSNS 352

Query: 116 DPSTDFR--GGGFISLENLLYLARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFMLI 173
           +P+ D      G ++L+N+LY +R  P ++   + +        E PFA + + +T +L 
Sbjct: 353 NPAQDLERVPPGLLALDNMLYFSRQAPSAYSRFVLENSSREDKHECPFARSSIQLTVLLC 412

Query: 174 QMLDLEAVKPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRASYMDFNTVMKS 233
            +L +   +P +     F       + +F  L+C++ +L++  W  MRA+  DF+ VM+ 
Sbjct: 413 DLLHVG--EPCSETAQDFSPMFFGQDQSFHELFCVSIQLLNKTWKEMRATQEDFDKVMQV 470

Query: 234 TRRQLERELLLE 245
            R QL R L L+
Sbjct: 471 VREQLARTLALK 482

Involved in cytoskeletal rearrangements required for phagocytosis of apoptotic cells and cell motility. Acts in assocation with DOCK1 and CRK. Was initially proposed to be required in complex with DOCK1 to activate Rac Rho small GTPases. May enhance the guanine nucleotide exchange factor (GEF) activity of DOCK1.

Bos taurus (taxid: 9913)

>sp|Q8BGF6|ELMD2_MOUSE ELMO domain-containing protein 2 OS=Mus musculus GN=Elmod2 PE=2 SV=1

 Score = 84.3 bits (207), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 52/155 (33%), Positives = 77/155 (49%), Gaps = 7/155 (4%)

Query: 75  YDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGKDPSTDFRGGGFISLENLLY 134
           YDS+  +H + L  LW+   P ++L   IS+QW ++G+QG DP TDFRG G + L NL+Y
Sbjct: 120 YDSANAQHEKMLLKLWSLLMPTKKLTARISKQWADIGFQGDDPKTDFRGMGILGLINLVY 179

Query: 135 LARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFMLIQMLDLEAVKPRTMVGATFLKF 194
            + N+      +L +    +    Y +A+ G+N+T M   +L  EA+K        F+  
Sbjct: 180 FSENYTSEAHQILSRSNHPK--LGYSYAIVGINLTEMAYSLLKSEALKLHLY---NFVPG 234

Query: 195 LSENESAFDLLYCITFKLMDHQWLAMRA-SYMDFN 228
           +   E  F   YC      D  WL     S M FN
Sbjct: 235 VPTMEH-FHQFYCYLVYEFDKFWLEEEPESIMYFN 268

Acts as a GTPase-activating protein (GAP) toward guanine nucleotide exchange factors like ARL2, ARL3, ARF1 and ARF6, but not for GTPases outside the Arf family.

Mus musculus (taxid: 10090)

>sp|Q96BJ8|ELMO3_HUMAN Engulfment and cell motility protein 3 OS=Homo sapiens GN=ELMO3 PE=2 SV=3

 Score = 84.3 bits (207), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 52/195 (26%), Positives = 93/195 (47%), Gaps = 15/195 (7%)

Query: 67  LQLRIDVAYDSSIPEHREALRALWNAAFPDE-----------ELRDLISEQWKEMGWQGK 115
           L+ R+    D    E RE L+ L  AAF  E             R L + +++++G+   
Sbjct: 293 LEPRMRTPLDPYSQEQREQLQVLRQAAFEVEGESSGAGLSADRRRSLCAREFRKLGFSNS 352

Query: 116 DPSTDFR--GGGFISLENLLYLARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFMLI 173
           +P+ D      G ++L+N+LY +RN P ++   + +        E PFA   + +T +L 
Sbjct: 353 NPAQDLERVPPGLLALDNMLYFSRNAPSAYSRFVLENSSREDKHECPFARGSIQLTVLLC 412

Query: 174 QMLDLEAVKPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRASYMDFNTVMKS 233
           ++L +   +P +     F       + +F  L+C+  +L++  W  MRA+  DF+ VM+ 
Sbjct: 413 ELLRVG--EPCSETAQDFSPMFFGQDQSFHELFCVGIQLLNKTWKEMRATQEDFDKVMQV 470

Query: 234 TRRQLERELLLEDVT 248
            R QL R L L+  +
Sbjct: 471 VREQLARTLALKPTS 485

Involved in cytoskeletal rearrangements required for phagocytosis of apoptotic cells and cell motility. Acts in assocation with DOCK1 and CRK. Was initially proposed to be required in complex with DOCK1 to activate Rac Rho small GTPases. May enhance the guanine nucleotide exchange factor (GEF) activity of DOCK1.

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	261
255571033	267	ELMO domain-containing protein, putative	1.0	0.977	0.895	1e-136
225453354	267	PREDICTED: ELMO domain-containing protei	1.0	0.977	0.895	1e-136
356568581	266	PREDICTED: ELMO domain-containing protei	1.0	0.981	0.868	1e-134
356531822	266	PREDICTED: ELMO domain-containing protei	1.0	0.981	0.864	1e-134
449445499	267	PREDICTED: ELMO domain-containing protei	1.0	0.977	0.868	1e-134
297734628	287	unnamed protein product [Vitis vinifera]	1.0	0.909	0.832	1e-134
224063629	267	predicted protein [Populus trichocarpa]	1.0	0.977	0.865	1e-133
224137120	267	predicted protein [Populus trichocarpa]	1.0	0.977	0.865	1e-132
297817322	266	hypothetical protein ARALYDRAFT_486497 [	1.0	0.981	0.823	1e-127
18411543	266	ELMO/CED-12 domain-containing protein [A	1.0	0.981	0.815	1e-126

>gi|255571033|ref|XP_002526467.1| ELMO domain-containing protein, putative [Ricinus communis] gi|223534142|gb|EEF35858.1| ELMO domain-containing protein, putative [Ricinus communis]

 Score =  490 bits (1261), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 239/267 (89%), Positives = 250/267 (93%), Gaps = 6/267 (2%)

Query: 1   MDERGGSFVAVRRISQGLDRG-NTCHSTS-----GSAAWLGRGLSCVCAQRRESDPRPSF 54
           MD+RGGSFVAVRRISQGL+RG NTCHSTS     GSAAWLGRGLSCVCAQRRESD RPSF
Sbjct: 1   MDDRGGSFVAVRRISQGLERGSNTCHSTSAEVVAGSAAWLGRGLSCVCAQRRESDARPSF 60

Query: 55  DLTPAQEECLQRLQLRIDVAYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQG 114
           DLT  QEECLQRLQ RIDVAYDSSIPEH+EALRALWNAAFP+EELR LISEQWKEMGWQG
Sbjct: 61  DLTLTQEECLQRLQSRIDVAYDSSIPEHQEALRALWNAAFPEEELRGLISEQWKEMGWQG 120

Query: 115 KDPSTDFRGGGFISLENLLYLARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFMLIQ 174
           KDPSTDFRGGGFISLENLL+ A+NFP SFQDLL+K+EGDRSVWEYPFAVAGVNITFMLIQ
Sbjct: 121 KDPSTDFRGGGFISLENLLFFAKNFPTSFQDLLQKREGDRSVWEYPFAVAGVNITFMLIQ 180

Query: 175 MLDLEAVKPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRASYMDFNTVMKST 234
           MLDLEAVKPRTMVGA FLKFL+ENESAFDLLYCITFKLMDHQWL M ASYMDFNTVMKST
Sbjct: 181 MLDLEAVKPRTMVGAVFLKFLTENESAFDLLYCITFKLMDHQWLNMHASYMDFNTVMKST 240

Query: 235 RRQLERELLLEDVTRLEDLPSYSLLSR 261
           RRQLERELLLED+TRLEDLPSY LL+R
Sbjct: 241 RRQLERELLLEDITRLEDLPSYGLLTR 267

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225453354|ref|XP_002271650.1| PREDICTED: ELMO domain-containing protein A [Vitis vinifera]

 Score =  489 bits (1260), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 239/267 (89%), Positives = 253/267 (94%), Gaps = 6/267 (2%)

Query: 1   MDERGG-SFVAVRRISQGLDRGNTCHSTS-----GSAAWLGRGLSCVCAQRRESDPRPSF 54
           MD+RGG SFVAVRRISQGLDRGNTCHSTS     GSAAWLGRGLSCVCAQRRESD RPSF
Sbjct: 1   MDDRGGGSFVAVRRISQGLDRGNTCHSTSAEVVAGSAAWLGRGLSCVCAQRRESDARPSF 60

Query: 55  DLTPAQEECLQRLQLRIDVAYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQG 114
           DLTPAQEECLQRLQ RI+V+YDSSI EH+EALRALWNA+FP+EELRDLISEQWKEMGWQG
Sbjct: 61  DLTPAQEECLQRLQSRIEVSYDSSISEHQEALRALWNASFPEEELRDLISEQWKEMGWQG 120

Query: 115 KDPSTDFRGGGFISLENLLYLARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFMLIQ 174
           KDPSTDFRGGGFISLENLL+ ARN+PKSFQDLLRKQEGDR++WEYPFAVAGVNITFMLIQ
Sbjct: 121 KDPSTDFRGGGFISLENLLFFARNYPKSFQDLLRKQEGDRALWEYPFAVAGVNITFMLIQ 180

Query: 175 MLDLEAVKPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRASYMDFNTVMKST 234
           MLDLEAVKPR+M GA FLKFLSENESAFDLLYCITFKLMD+QWLAM ASYMDFNTVMKST
Sbjct: 181 MLDLEAVKPRSMAGAIFLKFLSENESAFDLLYCITFKLMDNQWLAMHASYMDFNTVMKST 240

Query: 235 RRQLERELLLEDVTRLEDLPSYSLLSR 261
           R QLERELLLEDV+RLEDLPSYSLL+R
Sbjct: 241 RCQLERELLLEDVSRLEDLPSYSLLTR 267

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356568581|ref|XP_003552489.1| PREDICTED: ELMO domain-containing protein A-like [Glycine max]

 Score =  484 bits (1245), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 231/266 (86%), Positives = 248/266 (93%), Gaps = 5/266 (1%)

Query: 1   MDERGGSFVAVRRISQGLDRGNTCHSTS-----GSAAWLGRGLSCVCAQRRESDPRPSFD 55
           MD+RGGSFVAVRRISQGLDR NTCHS+S     GS AWLGRGLSCVCAQRRESD RPSFD
Sbjct: 1   MDDRGGSFVAVRRISQGLDRSNTCHSSSAEFVTGSTAWLGRGLSCVCAQRRESDARPSFD 60

Query: 56  LTPAQEECLQRLQLRIDVAYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGK 115
           LTPAQEECLQRLQ RID+ YD SIPEH++ALRALW+AAFP+EEL  LISEQWK MGWQGK
Sbjct: 61  LTPAQEECLQRLQNRIDIPYDGSIPEHQDALRALWSAAFPEEELHGLISEQWKNMGWQGK 120

Query: 116 DPSTDFRGGGFISLENLLYLARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFMLIQM 175
           DPSTDFRGGGFISLENLL+ ARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFMLIQM
Sbjct: 121 DPSTDFRGGGFISLENLLFFARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFMLIQM 180

Query: 176 LDLEAVKPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRASYMDFNTVMKSTR 235
           LDLEAVKPRT+VGATFLKFL+EN+SAFDLLYCITFK+MD QWL+MRASYMDFNTVMKSTR
Sbjct: 181 LDLEAVKPRTLVGATFLKFLAENDSAFDLLYCITFKMMDQQWLSMRASYMDFNTVMKSTR 240

Query: 236 RQLERELLLEDVTRLEDLPSYSLLSR 261
           RQLE+ELLLED+ RLED+PSY LL+R
Sbjct: 241 RQLEKELLLEDIMRLEDVPSYKLLTR 266

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356531822|ref|XP_003534475.1| PREDICTED: ELMO domain-containing protein A-like [Glycine max]

 Score =  483 bits (1244), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 230/266 (86%), Positives = 248/266 (93%), Gaps = 5/266 (1%)

Query: 1   MDERGGSFVAVRRISQGLDRGNTCHSTS-----GSAAWLGRGLSCVCAQRRESDPRPSFD 55
           MD+RGGSFVAVRRISQGLDR NTCHS+S     GS AWLGRGLSCVCAQRRESD RPSFD
Sbjct: 1   MDDRGGSFVAVRRISQGLDRSNTCHSSSAEFVTGSTAWLGRGLSCVCAQRRESDARPSFD 60

Query: 56  LTPAQEECLQRLQLRIDVAYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGK 115
           LTPAQEECLQRLQ RID+ YD S+PEH++ALR LWNAAFP+EEL  LISEQWK+MGWQGK
Sbjct: 61  LTPAQEECLQRLQSRIDIPYDGSVPEHQDALRDLWNAAFPEEELHGLISEQWKDMGWQGK 120

Query: 116 DPSTDFRGGGFISLENLLYLARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFMLIQM 175
           DPSTDFRGGGFISLENLL+ ARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFMLIQM
Sbjct: 121 DPSTDFRGGGFISLENLLFFARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFMLIQM 180

Query: 176 LDLEAVKPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRASYMDFNTVMKSTR 235
           LDLEAVKPRT+VGATFLKFL+EN+SAFDLLYCITFK+MD QWL+MRASYMDFNTVMKSTR
Sbjct: 181 LDLEAVKPRTLVGATFLKFLAENDSAFDLLYCITFKMMDQQWLSMRASYMDFNTVMKSTR 240

Query: 236 RQLERELLLEDVTRLEDLPSYSLLSR 261
           RQLE+ELLLED+ RLED+PSY LL+R
Sbjct: 241 RQLEKELLLEDIMRLEDVPSYKLLTR 266

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449445499|ref|XP_004140510.1| PREDICTED: ELMO domain-containing protein A-like [Cucumis sativus]

 Score =  483 bits (1243), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 232/267 (86%), Positives = 251/267 (94%), Gaps = 6/267 (2%)

Query: 1   MDERGG-SFVAVRRISQGLDRGNTCHSTS-----GSAAWLGRGLSCVCAQRRESDPRPSF 54
           MD+RGG SFVAVRRISQGL+RGNTCHSTS     GSAAWLGRGLSCVCAQRRESD RPSF
Sbjct: 1   MDDRGGGSFVAVRRISQGLERGNTCHSTSAEVVAGSAAWLGRGLSCVCAQRRESDARPSF 60

Query: 55  DLTPAQEECLQRLQLRIDVAYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQG 114
           DLTPAQEECL RLQ RID+AYDSSI EH+EALR LWN AFP+EELR LISEQWKEMGWQG
Sbjct: 61  DLTPAQEECLLRLQNRIDIAYDSSITEHQEALRTLWNVAFPEEELRGLISEQWKEMGWQG 120

Query: 115 KDPSTDFRGGGFISLENLLYLARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFMLIQ 174
           KDPSTDFRGGGFISLENLL+ A+NFPKSFQDLLRKQEGDRS+WEYPFAVAGVNITFMLIQ
Sbjct: 121 KDPSTDFRGGGFISLENLLFFAKNFPKSFQDLLRKQEGDRSLWEYPFAVAGVNITFMLIQ 180

Query: 175 MLDLEAVKPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRASYMDFNTVMKST 234
           MLDLEAVKPRT+VGATFLKFL+EN+SAFDLLYCITFKLMDH+WLAM ASYMDFNTVMK+T
Sbjct: 181 MLDLEAVKPRTLVGATFLKFLAENDSAFDLLYCITFKLMDHEWLAMHASYMDFNTVMKAT 240

Query: 235 RRQLERELLLEDVTRLEDLPSYSLLSR 261
           RRQLE+ELL+ED++RLE+LPSY LL+R
Sbjct: 241 RRQLEKELLIEDISRLEELPSYGLLNR 267

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297734628|emb|CBI16679.3| unnamed protein product [Vitis vinifera]

 Score =  483 bits (1242), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 239/287 (83%), Positives = 253/287 (88%), Gaps = 26/287 (9%)

Query: 1   MDERGG-SFVAVRRISQGLDRGNTCHSTS-------------------------GSAAWL 34
           MD+RGG SFVAVRRISQGLDRGNTCHSTS                         GSAAWL
Sbjct: 1   MDDRGGGSFVAVRRISQGLDRGNTCHSTSDLSISVIVNNFMFTDIQICLAEVVAGSAAWL 60

Query: 35  GRGLSCVCAQRRESDPRPSFDLTPAQEECLQRLQLRIDVAYDSSIPEHREALRALWNAAF 94
           GRGLSCVCAQRRESD RPSFDLTPAQEECLQRLQ RI+V+YDSSI EH+EALRALWNA+F
Sbjct: 61  GRGLSCVCAQRRESDARPSFDLTPAQEECLQRLQSRIEVSYDSSISEHQEALRALWNASF 120

Query: 95  PDEELRDLISEQWKEMGWQGKDPSTDFRGGGFISLENLLYLARNFPKSFQDLLRKQEGDR 154
           P+EELRDLISEQWKEMGWQGKDPSTDFRGGGFISLENLL+ ARN+PKSFQDLLRKQEGDR
Sbjct: 121 PEEELRDLISEQWKEMGWQGKDPSTDFRGGGFISLENLLFFARNYPKSFQDLLRKQEGDR 180

Query: 155 SVWEYPFAVAGVNITFMLIQMLDLEAVKPRTMVGATFLKFLSENESAFDLLYCITFKLMD 214
           ++WEYPFAVAGVNITFMLIQMLDLEAVKPR+M GA FLKFLSENESAFDLLYCITFKLMD
Sbjct: 181 ALWEYPFAVAGVNITFMLIQMLDLEAVKPRSMAGAIFLKFLSENESAFDLLYCITFKLMD 240

Query: 215 HQWLAMRASYMDFNTVMKSTRRQLERELLLEDVTRLEDLPSYSLLSR 261
           +QWLAM ASYMDFNTVMKSTR QLERELLLEDV+RLEDLPSYSLL+R
Sbjct: 241 NQWLAMHASYMDFNTVMKSTRCQLERELLLEDVSRLEDLPSYSLLTR 287

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224063629|ref|XP_002301236.1| predicted protein [Populus trichocarpa] gi|222842962|gb|EEE80509.1| predicted protein [Populus trichocarpa]

 Score =  478 bits (1231), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 231/267 (86%), Positives = 248/267 (92%), Gaps = 6/267 (2%)

Query: 1   MDERGGSFVAVRRISQGLDRGN-TCHSTS-----GSAAWLGRGLSCVCAQRRESDPRPSF 54
           MD+RGGSFVAVRRISQGL+RGN TCHSTS     GSAAWLGRGLSCVCAQRRESD RPSF
Sbjct: 1   MDDRGGSFVAVRRISQGLERGNNTCHSTSAEAVAGSAAWLGRGLSCVCAQRRESDARPSF 60

Query: 55  DLTPAQEECLQRLQLRIDVAYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQG 114
           DLTP QEECLQRLQ RIDV YDSS+ +H+EAL+ LWNAAFP+EEL  LISEQWKEMGWQG
Sbjct: 61  DLTPVQEECLQRLQSRIDVPYDSSVLDHQEALKTLWNAAFPEEELHGLISEQWKEMGWQG 120

Query: 115 KDPSTDFRGGGFISLENLLYLARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFMLIQ 174
           KDPSTDFRGGGFISLENLL+ ARNFPKSFQDLL+K+EGDRSVWEYPFAVAGVNITFMLIQ
Sbjct: 121 KDPSTDFRGGGFISLENLLFFARNFPKSFQDLLQKREGDRSVWEYPFAVAGVNITFMLIQ 180

Query: 175 MLDLEAVKPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRASYMDFNTVMKST 234
           MLDLEAVKPR +VGATFLKFL+EN+SAFDLLYCITFKLMDH+WL MRASYMDFN VMKST
Sbjct: 181 MLDLEAVKPRALVGATFLKFLAENDSAFDLLYCITFKLMDHEWLTMRASYMDFNAVMKST 240

Query: 235 RRQLERELLLEDVTRLEDLPSYSLLSR 261
           RRQLERELL ED+TRLEDLPSY+LL+R
Sbjct: 241 RRQLERELLSEDITRLEDLPSYTLLTR 267

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224137120|ref|XP_002327028.1| predicted protein [Populus trichocarpa] gi|222835343|gb|EEE73778.1| predicted protein [Populus trichocarpa]

 Score =  477 bits (1227), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 231/267 (86%), Positives = 249/267 (93%), Gaps = 6/267 (2%)

Query: 1   MDERGGSFVAVRRISQGLDRGN-TCHSTS-----GSAAWLGRGLSCVCAQRRESDPRPSF 54
           MD+RGGSFVAVRRISQGL+RGN TCHS+S     GSAAWLGRGLSCVCAQRRESD RPSF
Sbjct: 1   MDDRGGSFVAVRRISQGLERGNNTCHSSSAEVVAGSAAWLGRGLSCVCAQRRESDARPSF 60

Query: 55  DLTPAQEECLQRLQLRIDVAYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQG 114
           DLTP QEECLQRLQ RIDVAYDSS+PEH+EAL+ALWNAAFP+EEL  LISEQWKEMGWQG
Sbjct: 61  DLTPPQEECLQRLQSRIDVAYDSSVPEHQEALKALWNAAFPEEELHGLISEQWKEMGWQG 120

Query: 115 KDPSTDFRGGGFISLENLLYLARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFMLIQ 174
           KDPSTDFRGGGFISLENLL+ ARNFP SFQDLL+K+EGDRSVWEYPFAVAGVNITFMLIQ
Sbjct: 121 KDPSTDFRGGGFISLENLLFFARNFPTSFQDLLQKREGDRSVWEYPFAVAGVNITFMLIQ 180

Query: 175 MLDLEAVKPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRASYMDFNTVMKST 234
           MLDLEAVKPRT+VGATFLKFL E++SAFD LYCITFKLMDH+WL MRASYMDFN VMKST
Sbjct: 181 MLDLEAVKPRTLVGATFLKFLEEDDSAFDRLYCITFKLMDHEWLDMRASYMDFNAVMKST 240

Query: 235 RRQLERELLLEDVTRLEDLPSYSLLSR 261
           RRQLERELL ED+TRLE+LPSY+LL+R
Sbjct: 241 RRQLERELLSEDITRLEELPSYTLLTR 267

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297817322|ref|XP_002876544.1| hypothetical protein ARALYDRAFT_486497 [Arabidopsis lyrata subsp. lyrata] gi|297322382|gb|EFH52803.1| hypothetical protein ARALYDRAFT_486497 [Arabidopsis lyrata subsp. lyrata]

 Score =  459 bits (1180), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 219/266 (82%), Positives = 241/266 (90%), Gaps = 5/266 (1%)

Query: 1   MDERGGSFVAVRRISQGLDRGNTCHSTS-----GSAAWLGRGLSCVCAQRRESDPRPSFD 55
           MD+RGGSFVAVRRISQGL+RG+  HS+S     GSAAWLGRGLSCVC Q R+ DPRPSFD
Sbjct: 1   MDDRGGSFVAVRRISQGLERGSVYHSSSAEVVAGSAAWLGRGLSCVCVQGRDGDPRPSFD 60

Query: 56  LTPAQEECLQRLQLRIDVAYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGK 115
           LTPAQEECLQRLQ RIDVAYDSSI +H+EAL+ LW  AFP+EEL  ++SEQWKEMGWQGK
Sbjct: 61  LTPAQEECLQRLQSRIDVAYDSSISQHQEALKDLWKLAFPEEELHGIVSEQWKEMGWQGK 120

Query: 116 DPSTDFRGGGFISLENLLYLARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFMLIQM 175
           DPSTDFRGGGFISLENLLY AR FPKSFQDLLRKQ GDRSVWEYPFAVAG+NITFMLIQM
Sbjct: 121 DPSTDFRGGGFISLENLLYFARQFPKSFQDLLRKQVGDRSVWEYPFAVAGINITFMLIQM 180

Query: 176 LDLEAVKPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRASYMDFNTVMKSTR 235
           LDLEAVKPR++VG TFL+FLS NESAFDLLYCI FKLMD QWL+MRASYM+FNTVMKSTR
Sbjct: 181 LDLEAVKPRSIVGETFLRFLSVNESAFDLLYCIAFKLMDQQWLSMRASYMEFNTVMKSTR 240

Query: 236 RQLERELLLEDVTRLEDLPSYSLLSR 261
           RQLERE+++ED+T LEDLPSYSLLS+
Sbjct: 241 RQLEREIMVEDITCLEDLPSYSLLSQ 266

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18411543|ref|NP_567097.1| ELMO/CED-12 domain-containing protein [Arabidopsis thaliana] gi|30695160|ref|NP_850727.1| ELMO/CED-12 domain-containing protein [Arabidopsis thaliana] gi|145332909|ref|NP_001078320.1| ELMO/CED-12 domain-containing protein [Arabidopsis thaliana] gi|17473882|gb|AAL38361.1| putative protein [Arabidopsis thaliana] gi|20148671|gb|AAM10226.1| putative protein [Arabidopsis thaliana] gi|21536589|gb|AAM60921.1| unknown [Arabidopsis thaliana] gi|332646511|gb|AEE80032.1| ELMO/CED-12 domain-containing protein [Arabidopsis thaliana] gi|332646512|gb|AEE80033.1| ELMO/CED-12 domain-containing protein [Arabidopsis thaliana] gi|332646514|gb|AEE80035.1| ELMO/CED-12 domain-containing protein [Arabidopsis thaliana]

 Score =  457 bits (1177), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 217/266 (81%), Positives = 240/266 (90%), Gaps = 5/266 (1%)

Query: 1   MDERGGSFVAVRRISQGLDRGNTCHSTS-----GSAAWLGRGLSCVCAQRRESDPRPSFD 55
           MD+RGGSFVAVRRISQGL+RG+  HS+S     GSAAWLGRGLSCVC Q R+ DPRPSFD
Sbjct: 1   MDDRGGSFVAVRRISQGLERGSVYHSSSAEVVAGSAAWLGRGLSCVCVQGRDGDPRPSFD 60

Query: 56  LTPAQEECLQRLQLRIDVAYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGK 115
           LTPAQEECLQRLQ RIDVAYDSSIP+H+EAL+ LW  AFP+EEL  ++S+QWKEMGWQGK
Sbjct: 61  LTPAQEECLQRLQSRIDVAYDSSIPQHQEALKDLWKLAFPEEELHGIVSDQWKEMGWQGK 120

Query: 116 DPSTDFRGGGFISLENLLYLARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFMLIQM 175
           DPSTDFRGGGFISLENLLY AR FPKSF  LLRKQ GDRSVWEYPFAVAG+NITFMLIQM
Sbjct: 121 DPSTDFRGGGFISLENLLYFARKFPKSFHGLLRKQVGDRSVWEYPFAVAGINITFMLIQM 180

Query: 176 LDLEAVKPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRASYMDFNTVMKSTR 235
           LDLEAVKPR++VG TFL+FLS NESAFDLLYCI FKLMD QWL+MRASYM+FNTVMKSTR
Sbjct: 181 LDLEAVKPRSIVGETFLRFLSVNESAFDLLYCIAFKLMDQQWLSMRASYMEFNTVMKSTR 240

Query: 236 RQLERELLLEDVTRLEDLPSYSLLSR 261
           RQLERE+++ED+T LEDLPSYSLLS+
Sbjct: 241 RQLEREIMIEDITSLEDLPSYSLLSQ 266

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	261
TAIR|locus:2081947	266	AT3G60260 "AT3G60260" [Arabido	1.0	0.981	0.785	6.8e-111
TAIR|locus:2042456	266	AT2G44770 "AT2G44770" [Arabido	1.0	0.981	0.785	3.4e-109
TAIR|locus:2019544	281	AT1G67400 [Arabidopsis thalian	0.900	0.836	0.584	6.7e-72
TAIR|locus:2020753	265	AT1G03620 "AT1G03620" [Arabido	0.873	0.860	0.556	5.8e-66
TAIR|locus:2096389	323	AT3G03610 "AT3G03610" [Arabido	0.881	0.712	0.545	1.1e-62
TAIR|locus:2102276	213	AT3G43400 "AT3G43400" [Arabido	0.574	0.704	0.602	1.3e-45
DICTYBASE|DDB_G0278051	977	elmoA "engulfment and cell mot	0.429	0.114	0.407	4.4e-24
DICTYBASE|DDB_G0282949	618	elmoC "engulfment and cell mot	0.651	0.275	0.338	1.1e-22
DICTYBASE|DDB_G0280179	284	elmoB "engulfment and cell mot	0.574	0.528	0.335	4.4e-20
FB|FBgn0037473	316	CG10068 [Drosophila melanogast	0.616	0.509	0.325	1.4e-18

TAIR|locus:2081947 AT3G60260 "AT3G60260" [Arabidopsis thaliana (taxid:3702)]

 Score = 1095 (390.5 bits), Expect = 6.8e-111, P = 6.8e-111
 Identities = 209/266 (78%), Positives = 229/266 (86%)

Query:     1 MDERGGSFVAVRRISQGLDRGNTCHSTS-----GSAAWLGRGLSCVCAQRRESDPRPSFD 55
             MD+RGGSFVAVRRISQGL+RG+  HS+S     GSAAWLGRGLSCVC Q R+ DPRPSFD
Sbjct:     1 MDDRGGSFVAVRRISQGLERGSVYHSSSAEVVAGSAAWLGRGLSCVCVQGRDGDPRPSFD 60

Query:    56 LTPAQEECLQRLQLRIDVAYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGK 115
             LTPAQEECLQRLQ RIDVAYDSSIP+H+EAL+ LW  AFP+EEL  ++S+QWKEMGWQGK
Sbjct:    61 LTPAQEECLQRLQSRIDVAYDSSIPQHQEALKDLWKLAFPEEELHGIVSDQWKEMGWQGK 120

Query:   116 DPSTDFRGGGFISLENLLYLARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFMLIQM 175
             DPSTDFRGGGFISLENLLY AR FPKSF  LLRKQ GDRSVWEYPFAVAG+NITFMLIQM
Sbjct:   121 DPSTDFRGGGFISLENLLYFARKFPKSFHGLLRKQVGDRSVWEYPFAVAGINITFMLIQM 180

Query:   176 LDLEAVKPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRASYMDFNTVMKSTX 235
             LDLEAVKPR++VG TFL+FLS NESAFDLLYCI FKLMD QWL+MRASYM+FNTVMKST 
Sbjct:   181 LDLEAVKPRSIVGETFLRFLSVNESAFDLLYCIAFKLMDQQWLSMRASYMEFNTVMKSTR 240

Query:   236 XXXXXXXXXXDVTRLEDLPSYSLLSR 261
                       D+T LEDLPSYSLLS+
Sbjct:   241 RQLEREIMIEDITSLEDLPSYSLLSQ 266

GO:0003674 "molecular_function" evidence=ND

GO:0005737 "cytoplasm" evidence=ISM

GO:0005856 "cytoskeleton" evidence=IEA

GO:0006909 "phagocytosis" evidence=IEA

TAIR|locus:2042456 AT2G44770 "AT2G44770" [Arabidopsis thaliana (taxid:3702)]

 Score = 1079 (384.9 bits), Expect = 3.4e-109, P = 3.4e-109
 Identities = 209/266 (78%), Positives = 229/266 (86%)

Query:     1 MDERGGSFVAVRRISQGLDRGNTCHSTS-----GSAAWLGRGLSCVCAQRRESDPRPSFD 55
             MD+R GSFVAVRRISQGL+RG+  +S+S     GSAAWLGRGLSCVCAQRR+SD   +FD
Sbjct:     1 MDDREGSFVAVRRISQGLERGSVYNSSSAEAVPGSAAWLGRGLSCVCAQRRDSDANSTFD 60

Query:    56 LTPAQEECLQRLQLRIDVAYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGK 115
             LTPAQEECLQ LQ RIDVAYDS+IP H+EALR LW  +FP+EEL  LISEQWKEMGWQGK
Sbjct:    61 LTPAQEECLQSLQNRIDVAYDSTIPLHQEALRELWKLSFPEEELHGLISEQWKEMGWQGK 120

Query:   116 DPSTDFRGGGFISLENLLYLARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFMLIQM 175
             DPSTDFRGGGFISLENLLY ARNF KSFQDLLRKQ GDRSVWEYPFAVAG+N+TFMLIQM
Sbjct:   121 DPSTDFRGGGFISLENLLYFARNFQKSFQDLLRKQVGDRSVWEYPFAVAGINLTFMLIQM 180

Query:   176 LDLEAVKPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRASYMDFNTVMKSTX 235
             LDLEAVKPRT+VGATFLKFLSENESAFDLLYCI FKLMD QWL+MRASYM+FNTVMKST 
Sbjct:   181 LDLEAVKPRTIVGATFLKFLSENESAFDLLYCIAFKLMDQQWLSMRASYMEFNTVMKSTR 240

Query:   236 XXXXXXXXXXDVTRLEDLPSYSLLSR 261
                       D+  LEDLPSY+LL++
Sbjct:   241 RQLERELMLEDIMHLEDLPSYALLNQ 266

GO:0003674 "molecular_function" evidence=ND

GO:0005737 "cytoplasm" evidence=ISM

GO:0005856 "cytoskeleton" evidence=IEA

GO:0006909 "phagocytosis" evidence=IEA

TAIR|locus:2019544 AT1G67400 [Arabidopsis thaliana (taxid:3702)]

 Score = 727 (261.0 bits), Expect = 6.7e-72, P = 6.7e-72
 Identities = 138/236 (58%), Positives = 176/236 (74%)

Query:    26 STSGSAAW-LGRGLSCVCAQRRESDPRPSFDLTPAQEECLQRLQLRIDVAYDSSIPEHRE 84
             S S + +W + + L+CVC  R+ +  R   +LTP QEE L+RL+ R+   YD+S P+H++
Sbjct:    46 SCSSTPSWRIKKSLTCVCFNRKRAYERICSNLTPLQEERLKRLRKRMKNYYDASRPDHQD 105

Query:    85 ALRALWNAAFPDEELRDLISEQWKEMGWQGKDPSTDFRGGGFISLENLLYLARNFPKSFQ 144
             ALRALW+A +PDE+L+DLIS+QWK MGWQGKDPSTDFRG GFISLENLL+ A+ F  SFQ
Sbjct:   106 ALRALWSATYPDEKLQDLISDQWKNMGWQGKDPSTDFRGAGFISLENLLFFAKTFSTSFQ 165

Query:   145 DLLRKQEGDRSVWEYPFAVAGVNITFMLIQMLDLEAVKPRTMVGATFLKFLSENESAFDL 204
              LL KQ G R+ WEYPFAVAGVNITFM++QMLDLEA KPR+ +   FL+ LSE+E AFDL
Sbjct:   166 RLLNKQGGKRAAWEYPFAVAGVNITFMIMQMLDLEASKPRSFIRLVFLQMLSESEWAFDL 225

Query:   205 LYCITFKLMDHQWLAMRASYMDFNTVMKSTXXXXXXXXXXXDVTRLEDLPSYSLLS 260
             LYC+ F +MD QWL   A+YM+FN V++ T           DV R+ED+PS+SLLS
Sbjct:   226 LYCVAFVVMDKQWLDKNATYMEFNDVLRCTRGQLERELMMDDVFRIEDMPSFSLLS 281

GO:0005856 "cytoskeleton" evidence=IEA

GO:0006909 "phagocytosis" evidence=IEA

TAIR|locus:2020753 AT1G03620 "AT1G03620" [Arabidopsis thaliana (taxid:3702)]

 Score = 671 (241.3 bits), Expect = 5.8e-66, P = 5.8e-66
 Identities = 129/232 (55%), Positives = 167/232 (71%)

Query:    29 GSAAWLGRGLSCVCAQRRESDPRPSFDLTPAQEECLQRLQLRIDVAYDSSIPEHREALRA 88
             G+ +W+G GL       R  D    + L+P QEE LQRLQ R+ V +D + P+H+E+L+A
Sbjct:    35 GTRSWIG-GL--FTRSNRRQDKAVDYTLSPLQEERLQRLQDRMVVPFDETRPDHQESLKA 91

Query:    89 LWNAAFPDEELRDLISEQWKEMGWQGKDPSTDFRGGGFISLENLLYLARNFPKSFQDLLR 148
             LWN AFP+  L  L++EQWKEMGWQG +PSTDFRG GFI+LENLL+ AR +P  F+ LL 
Sbjct:    92 LWNVAFPNVHLTGLVTEQWKEMGWQGPNPSTDFRGCGFIALENLLFSARTYPVCFRRLLL 151

Query:   149 KQEGDRSVWEYPFAVAGVNITFMLIQMLDLEA-VKPRTMVGATFLKFLSENESAFDLLYC 207
             KQ GDR+ WEYPFAVAG+NI+FMLIQMLDL+   KP+ + G  FLK L E+E AFD+LYC
Sbjct:   152 KQRGDRAKWEYPFAVAGINISFMLIQMLDLQNNPKPKCLPGMNFLKLLEEDERAFDVLYC 211

Query:   208 ITFKLMDHQWLAMRASYMDFNTVMKSTXXXXXXXXXXXDVTRLEDLPSYSLL 259
             I F +MD QWLAM ASYM+FN V+++T           D+ R++DLP+Y+LL
Sbjct:   212 IAFAMMDAQWLAMHASYMEFNEVLQATRNQLERELSLDDIHRIQDLPAYNLL 263

GO:0003674 "molecular_function" evidence=ND

GO:0005737 "cytoplasm" evidence=ISM

GO:0005856 "cytoskeleton" evidence=IEA

GO:0006909 "phagocytosis" evidence=IEA

GO:0009855 "determination of bilateral symmetry" evidence=RCA

GO:0009944 "polarity specification of adaxial/abaxial axis" evidence=RCA

GO:0010014 "meristem initiation" evidence=RCA

GO:0010075 "regulation of meristem growth" evidence=RCA

TAIR|locus:2096389 AT3G03610 "AT3G03610" [Arabidopsis thaliana (taxid:3702)]

 Score = 640 (230.4 bits), Expect = 1.1e-62, P = 1.1e-62
 Identities = 127/233 (54%), Positives = 164/233 (70%)

Query:    29 GSAAWLGRGLSCVCAQRRESDPR--PSFDLTPAQEECLQRLQLRIDVAYDSSIPEHREAL 86
             GS + +GR LS     +  +  R  P   L+  QEE L+ ++ RI++ +D S  EH++AL
Sbjct:    90 GSGSLVGRFLSLPTFGQIGTGGRLLPP-PLSMLQEERLRNIKRRIEIPFDGSRMEHQDAL 148

Query:    87 RALWNAAFPDEELRDLISEQWKEMGWQGKDPSTDFRGGGFISLENLLYLARNFPKSFQDL 146
             R LW  A+P  EL  L SE WKEMGWQG DPSTDFRGGG+ISLENL++ A+ +P+SFQ L
Sbjct:   149 RQLWRLAYPQRELPPLKSELWKEMGWQGTDPSTDFRGGGYISLENLIFFAKTYPESFQRL 208

Query:   147 LRKQEGDRSVWEYPFAVAGVNITFMLIQMLDLEAVKPRTMVGATFLKFLSENESAFDLLY 206
             L KQ+G R+ WEYPFAVAG+NI+FML QMLDL++ KP T+ G  FL FL E+E AFD LY
Sbjct:   209 LHKQDGTRAEWEYPFAVAGINISFMLAQMLDLQSGKPSTIAGIRFLGFLEEDEMAFDNLY 268

Query:   207 CITFKLMDHQWLAMRASYMDFNTVMKSTXXXXXXXXXXXDVTRLEDLPSYSLL 259
             CI F++MD QWLA RASYM+FN V+KST           DV+ + DLP+++LL
Sbjct:   269 CIAFQMMDAQWLARRASYMEFNDVLKSTRAQLERELALDDVSSITDLPAFNLL 321

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0005856 "cytoskeleton" evidence=IEA

GO:0006909 "phagocytosis" evidence=IEA

GO:0009407 "toxin catabolic process" evidence=RCA

GO:0009414 "response to water deprivation" evidence=RCA

GO:0009611 "response to wounding" evidence=RCA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=RCA

GO:0010583 "response to cyclopentenone" evidence=RCA

GO:0016036 "cellular response to phosphate starvation" evidence=RCA

GO:0019375 "galactolipid biosynthetic process" evidence=RCA

GO:0042538 "hyperosmotic salinity response" evidence=RCA

GO:0042631 "cellular response to water deprivation" evidence=RCA

TAIR|locus:2102276 AT3G43400 "AT3G43400" [Arabidopsis thaliana (taxid:3702)]

 Score = 479 (173.7 bits), Expect = 1.3e-45, P = 1.3e-45
 Identities = 94/156 (60%), Positives = 116/156 (74%)

Query:    77 SSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGKDPSTDFRGGGFISLENLLYLA 136
             SS P  R  ++    + + DE+L+DLIS+QWK MGWQ KDPSTDFRG GFISLENL    
Sbjct:    58 SSTPSWR--IKKSLTSTYADEKLQDLISDQWKNMGWQRKDPSTDFRGDGFISLENL---- 111

Query:   137 RNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFMLIQMLDLEAVKPRTMVGATFLKFLS 196
             R F K+F  LL+KQ G R+ WEYPFAVAGVNITFM++QMLDLEA KPR+ +   FL+ LS
Sbjct:   112 RFFAKTFSRLLKKQGGKRAAWEYPFAVAGVNITFMIMQMLDLEASKPRSFIRLVFLQMLS 171

Query:   197 ENESAFDLLYCITFKLMDHQWLAMRASYMDFNTVMK 232
             E+E AF LLYC+ F +MD QWL   A+YM+FN V++
Sbjct:   172 ESEWAFGLLYCVAFVVMDKQWLDKNATYMEFNDVLR 207

GO:0003674 "molecular_function" evidence=ND

GO:0005737 "cytoplasm" evidence=ISM

GO:0005856 "cytoskeleton" evidence=IEA

GO:0006909 "phagocytosis" evidence=IEA

DICTYBASE|DDB_G0278051 elmoA "engulfment and cell motility ELM family protein" [Dictyostelium discoideum (taxid:44689)]

 Score = 229 (85.7 bits), Expect = 4.4e-24, Sum P(2) = 4.4e-24
 Identities = 46/113 (40%), Positives = 66/113 (58%)

Query:    60 QEECLQRLQLRIDVAYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGKDPST 119
             Q    Q +  R +V ++    EH   L  LW+  +P  +L   +SEQWK+MG+QG DP T
Sbjct:   362 QRHRFQVITNRKNVTFNKESSEHDALLMKLWSLTYPGVKLESRVSEQWKQMGFQGTDPCT 421

Query:   120 DFRGGGFISLENLLYLARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFML 172
             DFR  G   L+NL+Y A+N+ + F+ ++  Q  DR   EYP A AG+ +TF L
Sbjct:   422 DFRAMGIWGLDNLIYFAQNYNEKFRKIVNSQI-DRKEREYPTATAGIVLTFEL 473

GO:0030864 "cortical actin cytoskeleton" evidence=IDA

GO:0050764 "regulation of phagocytosis" evidence=IMP

GO:0048870 "cell motility" evidence=IMP

GO:0045159 "myosin II binding" evidence=IPI

GO:0030837 "negative regulation of actin filament polymerization" evidence=IMP

GO:0030587 "sorocarp development" evidence=IMP

GO:0005737 "cytoplasm" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0006909 "phagocytosis" evidence=IEA

GO:0005856 "cytoskeleton" evidence=IEA

DICTYBASE|DDB_G0282949 elmoC "engulfment and cell motility ELM family protein" [Dictyostelium discoideum (taxid:44689)]

 Score = 271 (100.5 bits), Expect = 1.1e-22, P = 1.1e-22
 Identities = 63/186 (33%), Positives = 107/186 (57%)

Query:    56 LTPAQEECLQRLQLRIDVAYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGK 115
             +T  Q + ++ L  +    Y+S+ P+H E L+ LW+  +P++E +   S  WK+ G+Q  
Sbjct:   357 VTAKQSQTIKILFQKKSTIYESTNPDHEEYLKHLWSLLYPEQEFQKK-SPLWKKFGFQSD 415

Query:   116 DPSTDFRGGGFISLENLLYLARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNIT---FML 172
             DP+ DFRG G + L NL++L ++     Q++L +   DR   +YPFAVAG+NI+   F +
Sbjct:   416 DPTRDFRGMGIMGLLNLIHLVQHHNDWVQEILAQ---DR---DYPFAVAGINISNLIFEV 469

Query:   173 IQMLDLEAVKP--RTMVGATFLKFLSE----NESAFDLLYCITFKLMDHQWLAMRASYMD 226
              Q+ +    +P   +   ++++  L      N+ AF+ LY + F L+DH W+ M A+YM 
Sbjct:   470 FQISEDSLQQPWYSSFWSSSYMAMLCSMSRHNDHAFEELYFLIFNLLDHLWIQMNATYMM 529

Query:   227 FNTVMK 232
             F  V+K
Sbjct:   530 FPLVIK 535

GO:0006909 "phagocytosis" evidence=IEA

GO:0005856 "cytoskeleton" evidence=IEA

DICTYBASE|DDB_G0280179 elmoB "engulfment and cell motility ELM family protein" [Dictyostelium discoideum (taxid:44689)]

 Score = 238 (88.8 bits), Expect = 4.4e-20, P = 4.4e-20
 Identities = 54/161 (33%), Positives = 89/161 (55%)

Query:    73 VAYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGKDPSTDFRGGGFISLENL 132
             + YD++  EH  +L  LW A  PD      +S++W  +G+QG DP+TDFRG G + L+NL
Sbjct:   116 IPYDNNNLEHEASLERLWEALLPDVRRSARLSKEWGTLGFQGMDPATDFRGMGILGLDNL 175

Query:   133 LYLARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFMLIQMLDLEAVKPRTMVGATFL 192
             +Y +    +  +++L+      S   YPFA+ G+NIT +++ ++D    KP   +   F 
Sbjct:   176 IYFSTQHSEDAREILKNSN---SKCCYPFAITGINITALVLNLID----KPHFKI--YFF 226

Query:   193 KFLSENESAFDLLYCITFKLMDHQWLAMRA-SYMDFNTVMK 232
             K  S   + F+ LY + F   D  + + +  S M+FNT+ K
Sbjct:   227 KNGS-TLTQFNELYSLVFISFDRFYQSKKPKSIMEFNTIKK 266

GO:0006909 "phagocytosis" evidence=IEA

GO:0005856 "cytoskeleton" evidence=IEA

GO:0044351 "macropinocytosis" evidence=RCA

FB|FBgn0037473 CG10068 [Drosophila melanogaster (taxid:7227)]

 Score = 224 (83.9 bits), Expect = 1.4e-18, P = 1.4e-18
 Identities = 55/169 (32%), Positives = 83/169 (49%)

Query:    68 QLRIDVAYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGKDPSTDFRGGGFI 127
             QLR +  YDS   +H + L  LW    PD  L   +++QW+++G+QG DP TDFRG G +
Sbjct:   128 QLRAE-KYDSDNLDHEQKLLRLWQLLMPDTPLTGRVTKQWQDIGFQGDDPKTDFRGMGML 186

Query:   128 SLENLLYLARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFMLIQMLDLEAVKPR--T 185
              LENLLY A  +  + + +L           Y +A+ G+N+T M   ++   A K     
Sbjct:   187 GLENLLYFATAYNDAAKHVLLHSM--HPTLGYTYAIVGINLTSMAFNLVKTGAAKTHFYN 244

Query:   186 MVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRA-SYMDFNTVMKS 233
             +V      F +  +  F  LYC  F   D  W+     + MDF  + +S
Sbjct:   245 LVVQHRQDFSTVED--FHKLYCYLFFEFDRFWMESDPRNIMDFREIYQS 291

GO:0006909 "phagocytosis" evidence=IEA

GO:0005856 "cytoskeleton" evidence=IEA

GO:0000910 "cytokinesis" evidence=IMP

GO:0090175 "regulation of establishment of planar polarity" evidence=IMP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00019062001 SubName- Full=Chromosome chr15 scaffold_19, whole genome shotgun sequence; (267 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	261
pfam04727	170	pfam04727, ELMO_CED12, ELMO/CED-12 family	2e-69

>gnl|CDD|218231 pfam04727, ELMO_CED12, ELMO/CED-12 family

 Score =  211 bits (539), Expect = 2e-69
 Identities = 73/171 (42%), Positives = 96/171 (56%), Gaps = 1/171 (0%)

Query: 62  ECLQRLQLRIDVAYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGKDPSTDF 121
             L  L+      +D   PEHR  L+ LW A FPDE L   +SE+WK++G+QG DP+TDF
Sbjct: 1   LTLNLLEKLRKTPFDLENPEHRRLLKTLWKALFPDEPLSSRVSEKWKDLGFQGDDPATDF 60

Query: 122 RGGGFISLENLLYLARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFMLIQMLDLEAV 181
           RG G + L NLLY A N+P  FQ LL +     +  EYPFAVA +N+T ML ++L +  +
Sbjct: 61  RGTGLLGLLNLLYFAENYPDEFQKLLLESSHRPAEHEYPFAVASINVTSMLYELLRIGKL 120

Query: 182 KPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRASYMDFNTVMK 232
                    F         AF+ LYC  F L D  W  MRA+ MDFN V++
Sbjct: 121 DQEDYKNYGF-PLFFPTLLAFEELYCALFHLFDRFWKEMRATIMDFNKVLE 170

This family represents a conserved domain which is found in a number of eukaryotic proteins including CED-12, ELMO I and ELMO II. ELMO1 is a component of signalling pathways that regulate phagocytosis and cell migration and is the mammalian orthologue of the C. elegans gene, ced-12. CED-12 is required for the engulfment of dying cells and cell migration. In mammalian cells, ELMO1 interacts with Dock180 as part of the CrkII/Dock180/Rac pathway responsible for phagocytosis and cell migration. ELMO1 is ubiquitously expressed, although its expression is highest in the spleen, an organ rich in immune cells. ELMO1 has a PH domain and a polyproline sequence motif at its C terminus which are not present in this alignment. Length = 170

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	261
KOG2998	302	consensus Uncharacterized conserved protein [Funct	100.0
PF04727	170	ELMO_CED12: ELMO/CED-12 family; InterPro: IPR00681	100.0
KOG2999	713	consensus Regulator of Rac1, required for phagocyt	99.98

>KOG2998 consensus Uncharacterized conserved protein [Function unknown]

Probab=100.00  E-value=6.3e-66  Score=462.94  Aligned_cols=254  Identities=51%  Similarity=0.822  Sum_probs=229.6

Q ss_pred             CCCCCCceEEEe-ecccCCCCCCccCCC-----CCchhhhcc-----cccccccccccCCCCCCCCCcHHHHHHHHHHHH
Q 024877            1 MDERGGSFVAVR-RISQGLDRGNTCHST-----SGSAAWLGR-----GLSCVCAQRRESDPRPSFDLTPAQEECLQRLQL   69 (261)
Q Consensus         1 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~-----~~~~~~~~~-----~~~c~~~~~~~~~~~~~~~L~~~Q~~~L~~L~~   69 (261)
                      |++.+|..+||+ +.|.+...-..-..+     .|..+|+|+     ++.|.+...+..+...+..+.+.|+++++.+++
T Consensus        37 ~~~~~g~~ra~~~e~sl~~~~~~~~~~ass~~~~~~~~~~~~v~~~~~i~~~~~~~r~~~~~~~~~~~~~~~~l~~~~e~  116 (302)
T KOG2998|consen   37 TDAYEGASRAVRTETSLGQEKPLLGSTASSEAPPGLISFLGRVMVDKGIKNIVDPNRRIDLAACRHLIPGYRELLQRLEE  116 (302)
T ss_pred             hcCCCCCcceeecchhhhhhhhhhhcccccccChhhhhhhHHHHHHhccccCCCcccchhhhhccccccCcHHHHHHHHH
Confidence            567889999988 555554332222111     889999999     999999999999998999999999999999999


Q ss_pred             hhcccCCCCCHHHHHHHHHHHHHhCCCcccchhhhhhHhHhcCCCCCCCCCCCcchhhhHhhHHHHHhhChHHHHHHHHh
Q 024877           70 RIDVAYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGKDPSTDFRGGGFISLENLLYLARNFPKSFQDLLRK  149 (261)
Q Consensus        70 ~~~~~~d~~~~~H~~~L~~Lw~~~~~~~~~~~~~~~~Wk~lGFQg~dP~TDFRg~GiLgL~~LlyF~~~~~~~~~~il~~  149 (261)
                      +.++|||.+|++|+++|++||+.++|+++++++++++|++|||||+||+|||||+|+|||+||+|||++||+.+++++.+
T Consensus       117 ~~~~~yDs~n~~H~e~L~~lwk~~~p~~~l~~lvs~qW~emGfQG~dPsTDFRG~GfL~LeNLlyFa~~~~~~aq~lL~~  196 (302)
T KOG2998|consen  117 LRQEPYDSDNPDHEELLLDLWKLLYPDKELPGLVSKQWKEMGFQGADPSTDFRGMGFLGLENLLYFARTYPTSAQRLLLK  196 (302)
T ss_pred             HHhccCCCCChhHHHHHHHHHHHhCCCCccchhHHHHHHHhccCCCCCCcccccchHHHHHHHHHHHHhhhHHHHHHHHh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hcCCCCCCCccHHHHHHHHHHHHHHHhhhccCC-CccccccceeeccccchhhHHHHHHHHHHHHHHHHHhCCCChhcHH
Q 024877          150 QEGDRSVWEYPFAVAGVNITFMLIQMLDLEAVK-PRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRASYMDFN  228 (261)
Q Consensus       150 q~s~~~~~~yPFAva~INiT~~L~~~L~~~~~~-~~~~~~~~f~~ll~~~~~~F~eLy~~~f~~f~~~W~~~~at~mdF~  228 (261)
                      |.  ++.|+|||||||||||+|++++|+.++.+ +.++....|     +++.+|+.|||++|..||++|+++++||||||
T Consensus       197 s~--~~r~eYpfAVvgINIT~m~~qmL~~eal~~~~~~~~~~~-----~~~~~F~~lYc~af~~~d~~Wl~~~~simefn  269 (302)
T KOG2998|consen  197 SR--HPRWEYPFAVVGINITFMAIQMLDLEALKKHFNNIVKVF-----ETEPAFDLLYCYAFLEFDKQWLEQRATIMEFN  269 (302)
T ss_pred             cC--CCccCCceEEEeecHHHHHHHHHHhhhcccccccccccc-----ccHHHHHHHHHHHHHHHHHHHHHhhccHHHHH
Confidence            75  55699999999999999999999999884 434333333     77899999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhhccccccccccCCccccccC
Q 024877          229 TVMKSTRRQLERELLLEDVTRLEDLPSYSLLSR  261 (261)
Q Consensus       229 ~Vl~~~r~ql~r~L~~~~~~~i~~~p~~~~~~~  261 (261)
                      .|++++|.|++++|++.|+..+.|+|+|++|.+
T Consensus       270 ~Vlk~~~~qler~L~~~d~~~~~~lp~~~~L~~  302 (302)
T KOG2998|consen  270 TVLKSFRRQLERELSLDDVLLITDLPAFNLLLQ  302 (302)
T ss_pred             HHHHHHHHHHHHhhhhhhhcccccchhhhhhcC
Confidence            999999999999999999999999999999964

>PF04727 ELMO_CED12: ELMO/CED-12 family; InterPro: IPR006816 This entry represents the ELMO (EnguLfment and Cell MOtility) domain, which is found in a number of eukaryotic proteins involved in the cytoskeletal rearrangements required for phagocytosis of apoptotic cells and cell motility, including CED-12, ELMO-1 and ELMO-2

Probab=100.00  E-value=6.8e-50  Score=339.24  Aligned_cols=168  Identities=43%  Similarity=0.767  Sum_probs=151.9

Q ss_pred             HHHHHHHhhcccCCCCCHHHHHHHHHHHHHhCCCcccchhhhhhHhHhcCCCCCCCCCCCcchhhhHhhHHHHHhhChHH
Q 024877           63 CLQRLQLRIDVAYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGKDPSTDFRGGGFISLENLLYLARNFPKS  142 (261)
Q Consensus        63 ~L~~L~~~~~~~~d~~~~~H~~~L~~Lw~~~~~~~~~~~~~~~~Wk~lGFQg~dP~TDFRg~GiLgL~~LlyF~~~~~~~  142 (261)
                      .|+.|+.++++|||++|++|+++|++||++++++.+.+++.+++|++|||||+||+|||||+|+|||+||+||+++||+.
T Consensus         2 ~l~~l~~~~~~~~d~~~~~h~~~L~~Lw~~~~~~~~~~~~~~~~W~~lGFQ~~dP~tDFR~~G~LgL~~L~yf~~~~~~~   81 (170)
T PF04727_consen    2 TLNLLRALAKTPFDPENPEHEELLQELWNALFPDEPPFSRISEHWKELGFQGEDPATDFRGMGLLGLDCLLYFAENYPDE   81 (170)
T ss_pred             hHHHHHHHHcCCCCCCCHHHHHHHHHHHHHhCCCCccCCcCccHHHHhCCCCCCcHHHHhhhhHHHHHHHHHHHHHChHH
Confidence            57889999999999999999999999999999998888899999999999999999999999999999999999999999


Q ss_pred             HHHHHHhhcCCCCCCCccHHHHHHHHHHHHHHHhhhccCCCccccccceeec-cccchhhHHHHHHHHHHHHHHHHHhCC
Q 024877          143 FQDLLRKQEGDRSVWEYPFAVAGVNITFMLIQMLDLEAVKPRTMVGATFLKF-LSENESAFDLLYCITFKLMDHQWLAMR  221 (261)
Q Consensus       143 ~~~il~~q~s~~~~~~yPFAva~INiT~~L~~~L~~~~~~~~~~~~~~f~~l-l~~~~~~F~eLy~~~f~~f~~~W~~~~  221 (261)
                      +++|+.++.++.+..+||||+||||||.+|+++|+++...+....  .+... +++.+.+|++|||++|.+|+++|++++
T Consensus        82 ~~~~l~~~~~~~~~~~~Pfa~~~invt~~l~~~l~~~~~~~~~~~--~~~~~~~~~~~~~f~elf~~~f~~f~~~W~~~~  159 (170)
T PF04727_consen   82 FRRILREQSSRSDENWYPFAVASINVTSLLCELLKLGALDSEFYK--RINFLSFFSSLEAFEELFCACFQLFDRTWKEMN  159 (170)
T ss_pred             HHHHHHHccCcccccccHHHHHHHHHHHHHHHHHhhcccCHHHhh--cccccccCccHHHHHHHHHHHHHHHHHHHccCC
Confidence            999999988776678999999999999999999999765433322  22222 557788999999999999999999999


Q ss_pred             CChhcHHHHHH
Q 024877          222 ASYMDFNTVMK  232 (261)
Q Consensus       222 at~mdF~~Vl~  232 (261)
                      +++|||++|++
T Consensus       160 at~~dF~~V~~  170 (170)
T PF04727_consen  160 ATIMDFNKVLK  170 (170)
T ss_pred             CCHHHHHhhcC
Confidence            99999999975

ELMO-1 and ELMO-2 are components of signalling pathways that regulate phagocytosis and cell migration and are mammalian orthologues of the Caenorhabditis elegans gene, ced-12 that is required for the engulfment of dying cells and cell migration. ELMO-1/2 act in association with DOCK1 and CRK. ELMO-1/2 interact with the SH3-domain of DOCK1 via an SH3-binding site to enhance the guanine nucleotide exchange factor (GEF) activity of DOCK1. ELMO-1/2 could be part of a complex with DOCK1 and Rac1 that could be required to activate Rac Rho small GTPases. Regulatory GTPases in the Ras superfamily employ a cycle of alternating GTP binding and hydrolysis, controlled by guanine nucleotide exchange factors and GTPase-activating proteins (GAPs), as essential features of their actions in cells. Within the Ras superfamily, the Arf family is composed of 30 members, including 22 Arf-like (Arl) proteins. The ELMO domain has been proposed to be a GAP domain for ARL2 and other members of the Arf family [].; GO: 0006909 phagocytosis, 0005856 cytoskeleton

>KOG2999 consensus Regulator of Rac1, required for phagocytosis and cell migration [Signal transduction mechanisms]

Probab=99.98  E-value=2.3e-32  Score=261.91  Aligned_cols=199  Identities=27%  Similarity=0.500  Sum_probs=182.1

Q ss_pred             CCCCcHHHHHHHHHHHHhhcccCCCCCHHHHHHHHHHHHHhCCCccc-----------chhhhhhHhHhcCCC-CCCCCC
Q 024877           53 SFDLTPAQEECLQRLQLRIDVAYDSSIPEHREALRALWNAAFPDEEL-----------RDLISEQWKEMGWQG-KDPSTD  120 (261)
Q Consensus        53 ~~~L~~~Q~~~L~~L~~~~~~~~d~~~~~H~~~L~~Lw~~~~~~~~~-----------~~~~~~~Wk~lGFQg-~dP~TD  120 (261)
                      .++|+.+|...+..+..|+.++.|+.+.+..+.++.+-..+|.++.-           .....+..|++||-. .||+.|
T Consensus       275 ~~~lyvlq~L~~glle~Rm~~~md~~~q~qr~~i~~lr~iaf~~~~~~~~~g~~~e~rk~l~~~~ykklgf~n~~npa~d  354 (713)
T KOG2999|consen  275 PIQLYVLQVLTLGLLEVRMRTKMDPQDQVQRELISELRRIAFDDESEPSRRGGGAEVRKILDIESYKKLGFENRINPAQD  354 (713)
T ss_pred             hHHHHHHHHHHHhhhHHhhhcccchhhHHHHHHHHHHHhcCcccccccccCCcchhhhhhhhHHHHHhhcccccCChHHh
Confidence            46899999999999999999999999999999999999999976432           235678999999998 899999


Q ss_pred             CC--cchhhhHhhHHHHHhhChHHHHHHHHhhcCCCCCCCccHHHHHHHHHHHHHHHhhhccCCCccccccceeeccccc
Q 024877          121 FR--GGGFISLENLLYLARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFMLIQMLDLEAVKPRTMVGATFLKFLSEN  198 (261)
Q Consensus       121 FR--g~GiLgL~~LlyF~~~~~~~~~~il~~q~s~~~~~~yPFAva~INiT~~L~~~L~~~~~~~~~~~~~~f~~ll~~~  198 (261)
                      |-  .+|+|+|+||+|||++||+.+.+|+.++++|.++++|||+..+|.+|.|||++|+.+.+  .+.....|.++||.+
T Consensus       355 f~etppG~LAldnMvyFA~~~~~~y~riVlENSsRedkhecpfgr~sieltk~lcEilrVge~--p~E~~~df~pmfFth  432 (713)
T KOG2999|consen  355 FGETPPGRLALDNMVYFARNSPQDYRRIVLENSSREDKHECPFGRMSIELTKILCELLRVGEP--PDELDRDFIPMFFTH  432 (713)
T ss_pred             cccCCchHHHHHHHHHHHHhCHHHHHHHHHhcccccccCcCCcCccHHHHHHHHHHHHhcCCC--chhhcCccceeeecC
Confidence            98  89999999999999999999999999999999999999999999999999999999864  344456799999999


Q ss_pred             hhhHHHHHHHHHHHHHHHHHhCCCChhcHHHHHHHHHHHHHHhhccccccccccCC
Q 024877          199 ESAFDLLYCITFKLMDHQWLAMRASYMDFNTVMKSTRRQLERELLLEDVTRLEDLP  254 (261)
Q Consensus       199 ~~~F~eLy~~~f~~f~~~W~~~~at~mdF~~Vl~~~r~ql~r~L~~~~~~~i~~~p  254 (261)
                      +..|+++||+|.++|+++|++|+||-.||++|+.+||+||.|+|... .++++++-
T Consensus       433 d~~Fee~FciciqLlnkTWKEMrAt~edf~KVmqVVrEQl~r~L~~k-p~sld~fk  487 (713)
T KOG2999|consen  433 DTPFEELFCICVQLLNRTWKEMRATAEDFEKVMQVVREQLRRALKRK-PQSLDQFK  487 (713)
T ss_pred             CCcHHHHHHHHHHHHHhHHHHHHhhhhhHHHHHHHHHHHHHHHhccC-CccHHHHH
Confidence            99999999999999999999999999999999999999999999966 77776543

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	261
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-06

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 47.2 bits (111), Expect = 3e-06
 Identities = 40/254 (15%), Positives = 76/254 (29%), Gaps = 55/254 (21%)

Query: 34  LGRGLSCVCAQRRESDPRPSFDLTPAQEECLQRLQLRIDVAYDSSIPEHREALRAL---W 90
           L   +      R +        +   Q E L+RL              +   L  L    
Sbjct: 205 LLYQIDPNWTSRSDHSSNIKLRIHSIQAE-LRRLLKS---------KPYENCLLVLLNVQ 254

Query: 91  NA----AFPDEELRDLISEQWKE-----MGWQGKDPSTDFRGGGFISLENLLYLARNFPK 141
           NA    AF +   + L++ ++K+             S D         E    L +    
Sbjct: 255 NAKAWNAF-NLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDC 313

Query: 142 SFQDLLRKQEGDRSVWEYPFAVAGV-------NITFMLIQMLDLEAVKPRTMVGATFLKF 194
             QD L ++    +    P  ++ +         T+   + ++ + +    +   + L  
Sbjct: 314 RPQD-LPREVLTTN----PRRLSIIAESIRDGLATWDNWKHVNCDKLT-TII--ESSLNV 365

Query: 195 LSENE--SAFDLLYC------ITFKLMDHQWLAMRASYMDFNTVMKSTRRQLERELLLED 246
           L   E    FD L        I   L+   W       +  + VM     +L +  L+E 
Sbjct: 366 LEPAEYRKMFDRLSVFPPSAHIPTILLSLIW-----FDVIKSDVMVVV-NKLHKYSLVE- 418

Query: 247 VTRLEDLPSYSLLS 260
             +     + S+ S
Sbjct: 419 --KQPKESTISIPS 430

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00