Citrus Sinensis ID: 025040

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------26
Protein Sequence
MSIAGMNFSLMLNSVGFYQISKLSMIPVVCVMEWILHNKHYSKEVKMAVVVVVIGVGVCTITDVKVNAKGFLCACVAVLSTSLQQITIGSLQKKYSIGSFELLSKTAPIQAVSLLVLGPFVDYYLNGKFITTYKMTSGAILFIFLSCALAVFCNVSQYLCIGRFSATSFQVLGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYSWAVEAEKQRNAKTSPQSKNSLTEEEIRLLKEGVENTPVKDVELGETKE
Secondary Structure (PSIPRED)
ccEEEEEHHcccccHHHHHHHHHHHHHHHHHHHHHHHccccccEEEHHHHHEEEcEEEEEEccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHcccHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHcccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccEEEEEEEHccccHHHHHHHHHHHHHHHHHHHHHHHcccccHEEEEEEEEEEEEEEEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHcHHHHcccccccccEccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHcccccccccccccccccccc
Coil and Loop (DISEMBL)
MSIAGMNFSLMLNSVGFYQISKLSMIPVVCVMEWILHNKHYSKEVKMAVVVVVIGVGVCTITDVKVNAKGFLCACVAVLSTSLQQITIGSLqkkysigsfellsktapiQAVSLLVLGpfvdyylnGKFITTYKMTSGAILFIFLSCALAVFCNVsqylcigrfsatsfqVLGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYSWAVEAEkqrnaktspqsknslTEEEIRLLKegventpvkdvelgetke
Flexible Loop (DISEMBL)
MSIAGMNFSLMLNSVGFYQISKLSMIPVVCVMEWILHNKHYSKEVKMAVVVVVIGVGVCTITDVKVNAKGFLCACVAVLSTSLQQITIGSLQKKYSIGSFELLSKTAPIQAVSLLVLGPFVDYYLNGKFITTYKMTSGAILFIFLSCALAVFCNVSQYLCIGRFSATSFQVLGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYSWAVEAekqrnaktspqsknsltEEEIRllkegventpvkdvelgetke
Low Complexity Region (SEG)
MSIAGMNFSLMLNSVGFYQISKLSMIPVVCVMEWILHNKHYSKEVKMAvvvvvigvgvctitdvKVNAKGFLCACVAVLSTSLQQITIGSLQKKYSIGSFELLSKTAPIQAVSLLVLGPFVDYYLNGKFITTYKMTSGAILFIFLSCALAVFCNVSQYLCIGRFSATSFQVLGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYSWAVEAEKQRNAKTSPQSKNSLTEEEIRLLKEGVENTPVKDVELGETKE
Disordered region (IsUnstruct)
*****MNFSLMLNSVGFYQISKLSMIPVVCVMEWILHNKHYSKEVKMAVVVVVIGVGVCTITDVKVNAKGFLCACVAVLSTSLQQITIGSLQKKYSIGSFELLSKTAPIQAVSLLVLGPFVDYYLNGKFITTYKMTSGAILFIFLSCALAVFCNVSQYLCIGRFSATSFQVLGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYSWAVE********************************************
Disordered Region (DISOPRED)
MSIAGMNFSLMLNSVGFYQISKLSMIPVVCVMEWILHNKHYSKEVKMAVVVVVIGVGVCTITDVKVNAKGFLCACVAVLSTSLQQITIGSLQKKYSIGSFELLSKTAPIQAVSLLVLGPFVDYYLNGKFITTYKMTSGAILFIFLSCALAVFCNVSQYLCIGRFSATSFQVLGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIY*************************************************
Disordered Region (DISEMBL)
MSIAGMNFSLMLNSVGFYQISKLSMIPVVCVMEWILHNKHYSKEVKMAVVVVVIGVGVCTITDVKVNAKGFLCACVAVLSTSLQQITIGSLQKKYSIGSFELLSKTAPIQAVSLLVLGPFVDYYLNGKFITTYKMTSGAILFIFLSCALAVFCNVSQYLCIGRFSATSFQVLGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYSWAVEAE***************TEEEIRLLKEGVENTPVKDVELGETKE
Disordered Region (DISPRO)
MSIAGMNFSLMLNSVGFYQISKLSMIPVVCVMEWILHNKHYSKEVKMAVVVVVIGVGVCTITDVKVNAKGFLCACVAVLSTSLQQITIGSLQKKYSIGSFELLSKTAPIQAVSLLVLGPFVDYYLNGKFITTYKMTSGAILFIFLSCALAVFCNVSQYLCIGRFSATSFQVLGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYSWAVEAEK*****************************************
Transmembrane Helix (TMHMM)
ooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
ooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
oooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSIAGMNFSLMLNSVGFYQISKLSMIPVVCVMEWILHNKHYSKEVKMAVVVVVIGVGVCTITDVKVNAKGFLCACVAVLSTSLQQITIGSLQKKYSIGSFELLSKTAPIQAVSLLVLGPFVDYYLNGKFITTYKMTSGAILFIFLSCALAVFCNVSQYLCIGRFSATSFQVLGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYSWAVEAEKQRNAKTSPQSKNSLTEEEIRLLKEGVENTPVKDVELGETKE
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	259	2.2.26 [Sep-21-2011]
Q9SRE4	347	UDP-galactose transporter	yes	no	0.996	0.743	0.813	1e-119
Q8RXL8	357	Uncharacterized membrane	no	no	0.891	0.647	0.387	2e-46
Q1JQ66	313	Solute carrier family 35	yes	no	0.857	0.709	0.295	3e-22
A4IFK2	313	Solute carrier family 35	yes	no	0.830	0.686	0.296	2e-21
Q7Z769	313	Solute carrier family 35	yes	no	0.814	0.674	0.289	4e-20
Q6PGC7	313	Solute carrier family 35	yes	no	0.830	0.686	0.278	7e-20
Q9C521	336	UDP-galactose transporter	no	no	0.876	0.675	0.246	7e-12
Q9SFE9	341	GDP-mannose transporter G	no	no	0.907	0.689	0.252	1e-11
Q9LDH3	361	Probable sugar phosphate/	no	no	0.833	0.598	0.284	5e-07
Q9VR50	373	Solute carrier family 35	yes	no	0.841	0.584	0.206	3e-06

>sp|Q9SRE4|UGAL2_ARATH UDP-galactose transporter 2 OS=Arabidopsis thaliana GN=UDP-GALT2 PE=2 SV=1

 Score =  428 bits (1100), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 210/258 (81%), Positives = 240/258 (93%)

Query: 1   MSIAGMNFSLMLNSVGFYQISKLSMIPVVCVMEWILHNKHYSKEVKMAVVVVVIGVGVCT 60
           +SIA MNFSLMLNSVGFYQISKLSMIPVVCV+EWILH+KHY KEVK +V+VVVIGVG+CT
Sbjct: 89  ISIAAMNFSLMLNSVGFYQISKLSMIPVVCVLEWILHSKHYCKEVKASVMVVVIGVGICT 148

Query: 61  ITDVKVNAKGFLCACVAVLSTSLQQITIGSLQKKYSIGSFELLSKTAPIQAVSLLVLGPF 120
           +TDVKVNAKGF+CAC AV STSLQQI+IGSLQKKYS+GSFELLSKTAPIQA+SLL+ GPF
Sbjct: 149 VTDVKVNAKGFICACTAVFSTSLQQISIGSLQKKYSVGSFELLSKTAPIQAISLLICGPF 208

Query: 121 VDYYLNGKFITTYKMTSGAILFIFLSCALAVFCNVSQYLCIGRFSATSFQVLGHMKTVCV 180
           VDY L+GKFI+TY+MT GAI  I LSCALAVFCN+SQYLCIGRFSATSFQVLGHMKTVCV
Sbjct: 209 VDYLLSGKFISTYQMTYGAIFCILLSCALAVFCNISQYLCIGRFSATSFQVLGHMKTVCV 268

Query: 181 LTLGWLLFDSALTFKNISGMILAVVGMVIYSWAVEAEKQRNAKTSPQSKNSLTEEEIRLL 240
           LTLGWLLFDS +TFKNI+GM +A+VGMVIYSWAV+ EKQRNAK++P  K+S+TE+EI+LL
Sbjct: 269 LTLGWLLFDSEMTFKNIAGMAIAIVGMVIYSWAVDIEKQRNAKSTPHGKHSMTEDEIKLL 328

Query: 241 KEGVENTPVKDVELGETK 258
           KEGVE+  +KDVELG+TK
Sbjct: 329 KEGVEHIDLKDVELGDTK 346

UDP-galactose transporter that transports UDP-galactose, UDP-glucose and GDP-fucose.
Arabidopsis thaliana (taxid: 3702)

>sp|Q8RXL8|Y1689_ARATH Uncharacterized membrane protein At1g06890 OS=Arabidopsis thaliana GN=At1g06890 PE=1 SV=1

 Score =  186 bits (471), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 91/235 (38%), Positives = 155/235 (65%), Gaps = 4/235 (1%)

Query: 1   MSIAGMNFSLMLNSVGFYQISKLSMIPVVCVMEWILHNKHYSKEVKMAVVVVVIGVGVCT 60
           +SI  +N SL  NSVGFYQ++KL++IP   ++E +   K +S++++ ++ ++++GVG+ T
Sbjct: 84  ISIGLLNLSLGFNSVGFYQMTKLAIIPCTVLLETLFFRKKFSRKIQFSLTILLLGVGIAT 143

Query: 61  ITDVKVNAKGFLCACVAVLSTSLQQITIGSLQKKYSIGSFELLSKTAPIQAVSLLVLGPF 120
           +TD+++N  G + + +AV++T + QI   ++QKK+ + S +LL ++ P QA++L V GPF
Sbjct: 144 VTDLQLNMLGSVLSLLAVVTTCVAQIMTNTIQKKFKVSSTQLLYQSCPYQAITLFVTGPF 203

Query: 121 VDYYLNGKFITTYKMTSGAILFIFLSCALAVFCNVSQYLCIGRFSATSFQVLGHMKTVCV 180
           +D  L  + +  +K TS  + FI LSC ++V  N S +L IG+ S  ++QVLGH+KT  V
Sbjct: 204 LDGLLTNQNVFAFKYTSQVVFFIVLSCLISVSVNFSTFLVIGKTSPVTYQVLGHLKTCLV 263

Query: 181 LTLGWLLFDSALTFKNISGMILAVVGMVIYSWAVEAEKQRNAKTS----PQSKNS 231
           L  G++L      ++NI G+++AV+GMV+YS+    E Q+ A  +    PQ K S
Sbjct: 264 LAFGYVLLRDPFDWRNILGILVAVIGMVVYSYYCSIETQQKASETSTQLPQMKES 318

Arabidopsis thaliana (taxid: 3702)

>sp|Q1JQ66|S35E3_DANRE Solute carrier family 35 member E3 OS=Danio rerio GN=slc35e3 PE=2 SV=1

 Score =  105 bits (262), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 121/230 (52%), Gaps = 8/230 (3%)

Query: 7   NFSLMLNSVGFYQISKLSMIPVVCVMEWILHNKHYSKEVKMAVVVVVIGVGVCTITDVKV 66
           N SL  N++G YQ++K+   PV+  ++ + + K +S ++K+ +V + +GV + +  DV+ 
Sbjct: 92  NLSLQSNTIGTYQLAKVMTTPVIIAIQTMYYRKTFSTKIKLTLVPITLGVILNSYYDVRF 151

Query: 67  NAKGFLCACVAVLSTSLQQITIGSLQKKYSIGSFELLSKTAPIQAVSLLVLGPFVDYYLN 126
           N  G + A + VL TSL Q+ +G+ Q +  + S +LL   AP+ +  LLVL PF +  L 
Sbjct: 152 NLMGMIFATLGVLVTSLYQVWVGAKQHELQVNSMQLLYYQAPMSSAFLLVLVPFFE-PLT 210

Query: 127 GKFITTYKMTSGAILFIFLSCALAVFCNVSQYLCIGRFSATSFQVLGHMKTVCVLTLGWL 186
           G        +  A+  + LS  +A   N+S Y  IG  S  ++ + GH K    L  G++
Sbjct: 211 GDGGIFGPWSFLALFMVLLSGVIAFLVNLSIYWIIGNTSPVTYNMFGHFKFCITLLGGYV 270

Query: 187 LFDSALTFKNISGMILAVVGMVIYSWAVEAEKQRNAKTSPQSKNSLTEEE 236
           LF   L+     G++  + G++ Y+    AE++       + K+ LT+  
Sbjct: 271 LFQDPLSLNQGLGILCTLTGILAYTHFKLAEQE-------EGKSRLTQRP 313

Putative transporter.

Danio rerio (taxid: 7955)

>sp|A4IFK2|S35E3_BOVIN Solute carrier family 35 member E3 OS=Bos taurus GN=SLC35E3 PE=2 SV=1

 Score =  102 bits (254), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 65/219 (29%), Positives = 119/219 (54%), Gaps = 4/219 (1%)

Query: 7   NFSLMLNSVGFYQISKLSMIPVVCVMEWILHNKHYSKEVKMAVVVVVIGVGVCTITDVKV 66
           N SL  N++G YQ++K    PV+ V++ + + K +S ++++ ++ + +GV + +  DVK 
Sbjct: 92  NLSLQNNTIGTYQLAKAMTTPVIIVIQTLCYKKTFSTKIRLTLIPITLGVILNSYYDVKF 151

Query: 67  NAKGFLCACVAVLSTSLQQITIGSLQKKYSIGSFELLSKTAPIQAVSLLVLGPFVD-YYL 125
           N  G + A + VL TSL Q+ +G+ Q +  + S +LL   AP+ +  LLV  PF +  + 
Sbjct: 152 NFLGTVFAALGVLVTSLYQVWVGAKQHELQVNSMQLLYYQAPMSSAMLLVAVPFFEPVFA 211

Query: 126 NGKFITTYKMTSGAILFIFLSCALAVFCNVSQYLCIGRFSATSFQVLGHMKTVCVLTLGW 185
            G     + ++  A+L + LS  +A   N+S Y  IG  S  ++ + GH K    L  G+
Sbjct: 212 EGGIFGPWSVS--ALLMVLLSGVIAFMVNLSIYWIIGNTSPVTYNMFGHFKFCITLFGGY 269

Query: 186 LLFDSALTFKNISGMILAVVGMVIYSWAVEAEKQRNAKT 224
           +LF   L+     GM+  + G++ Y+   +  +Q  +K+
Sbjct: 270 VLFKDPLSINQGLGMLCTLFGILAYT-HFKLSEQEGSKS 307

Putative transporter.

Bos taurus (taxid: 9913)

>sp|Q7Z769|S35E3_HUMAN Solute carrier family 35 member E3 OS=Homo sapiens GN=SLC35E3 PE=2 SV=1

 Score = 98.6 bits (244), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 62/214 (28%), Positives = 114/214 (53%), Gaps = 3/214 (1%)

Query: 7   NFSLMLNSVGFYQISKLSMIPVVCVMEWILHNKHYSKEVKMAVVVVVIGVGVCTITDVKV 66
           N SL  N++G YQ++K    PV+  ++   + K +S  +++ ++ + +GV + +  DVK 
Sbjct: 92  NLSLQNNTIGTYQLAKAMTTPVIIAIQTFCYQKTFSTRIQLTLIPITLGVILNSYYDVKF 151

Query: 67  NAKGFLCACVAVLSTSLQQITIGSLQKKYSIGSFELLSKTAPIQAVSLLVLGPFVD-YYL 125
           N  G + A + VL TSL Q+ +G+ Q +  + S +LL   AP+ +  LLV  PF +  + 
Sbjct: 152 NFLGMVFAALGVLVTSLYQVWVGAKQHELQVNSMQLLYYQAPMSSAMLLVAVPFFEPVFG 211

Query: 126 NGKFITTYKMTSGAILFIFLSCALAVFCNVSQYLCIGRFSATSFQVLGHMKTVCVLTLGW 185
            G     + ++  A+L + LS  +A   N+S Y  IG  S  ++ + GH K    L  G+
Sbjct: 212 EGGIFGPWSVS--ALLMVLLSGVIAFMVNLSIYWIIGNTSPVTYNMFGHFKFCITLFGGY 269

Query: 186 LLFDSALTFKNISGMILAVVGMVIYSWAVEAEKQ 219
           +LF   L+     G++  + G++ Y+    +E++
Sbjct: 270 VLFKDPLSINQALGILCTLFGILAYTHFKLSEQE 303

Putative transporter.

Homo sapiens (taxid: 9606)

>sp|Q6PGC7|S35E3_MOUSE Solute carrier family 35 member E3 OS=Mus musculus GN=Slc35e3 PE=2 SV=1

 Score = 97.8 bits (242), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 61/219 (27%), Positives = 117/219 (53%), Gaps = 4/219 (1%)

Query: 7   NFSLMLNSVGFYQISKLSMIPVVCVMEWILHNKHYSKEVKMAVVVVVIGVGVCTITDVKV 66
           N SL  N++G YQ++K    PV+  ++   + K +S  +++ ++ + +GV + +  DVK 
Sbjct: 92  NLSLQNNTIGTYQLAKAMTTPVIIAIQTFWYQKRFSVRIQLTLIPITVGVILNSYYDVKF 151

Query: 67  NAKGFLCACVAVLSTSLQQITIGSLQKKYSIGSFELLSKTAPIQAVSLLVLGPFVD-YYL 125
           ++ G + A + V+ TSL Q+ +G+ Q +  + S +LL   AP+ +  LLV  PF +  + 
Sbjct: 152 HSLGMVFAALGVVVTSLYQVWVGAKQHELQVNSMQLLYYQAPMSSAMLLVAVPFFEPVFA 211

Query: 126 NGKFITTYKMTSGAILFIFLSCALAVFCNVSQYLCIGRFSATSFQVLGHMKTVCVLTLGW 185
            G     + ++  A+L + LS  +A   N+S Y  IG  S  ++ + GH K    L  G+
Sbjct: 212 EGGIFGPWSVS--ALLMVLLSGIIAFMVNLSIYWIIGNTSPVTYNMFGHFKFCITLCGGY 269

Query: 186 LLFDSALTFKNISGMILAVVGMVIYSWAVEAEKQRNAKT 224
           +LF   L+     G++  + G++ Y+   +  +Q  +K+
Sbjct: 270 ILFKDPLSVNQGLGILCTLFGILTYT-HFKLSEQEGSKS 307

Putative transporter.

Mus musculus (taxid: 10090)

>sp|Q9C521|UGAL1_ARATH UDP-galactose transporter 1 OS=Arabidopsis thaliana GN=UDP-GALT1 PE=2 SV=1

 Score = 71.2 bits (173), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 58/235 (24%), Positives = 103/235 (43%), Gaps = 8/235 (3%)

Query: 7   NFSLMLNSVGFYQISKLSMIPVVCVMEWILHNKHYSKEVKMAVVVVVIGVGVCTITDVKV 66
           N SL    V F Q  K        V++W++  K++   +  ++V +V G+ + ++T++  
Sbjct: 93  NVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTELSF 152

Query: 67  NAKGFLCACVAVLSTSLQQITIGSLQKKYSIGSFELLSKTAPIQAVSLLVLGPFVDYYLN 126
           N  GF  A    L+TS + I   SL   Y   S   +   AP      ++LG      L 
Sbjct: 153 NMFGFCAALFGCLATSTKTILAESLLHGYKFDSINTVYYMAPFAT---MILG-IPALLLE 208

Query: 127 GKFITTY---KMTSGAILFIFLSCALAVFC-NVSQYLCIGRFSATSFQVLGHMKTVCVLT 182
           G  I ++        + L I LS  +  FC N S +  I   +A +F V G++K    + 
Sbjct: 209 GSGILSWFEAHPAPWSALIIILSSGVLAFCLNFSIFYVIHSTTAVTFNVAGNLKVAVAVM 268

Query: 183 LGWLLFDSALTFKNISGMILAVVGMVIYSWAVEAEKQRNAKTSPQSKNSLTEEEI 237
           + WL+F + +++ N  G  + +VG   Y +      Q+   T    +   ++ E+
Sbjct: 269 VSWLIFRNPISYMNAVGCGITLVGCTFYGYVRHMLSQQTPGTPRTPRTPRSKMEL 323

UDP-galactose transporter that transports UDP-galactose, UDP-glucose and GDP-fucose.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SFE9|GONS5_ARATH GDP-mannose transporter GONST5 OS=Arabidopsis thaliana GN=GONST5 PE=2 SV=1

 Score = 70.5 bits (171), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 62/246 (25%), Positives = 114/246 (46%), Gaps = 11/246 (4%)

Query: 7   NFSLMLNSVGFYQISKLSMIPVVCV-MEWILHNKHYSKEVKMAVVVVVIGVGVCTITDVK 65
           N SL    V F Q  K S+ P   V ++W++  K++   +  ++V +V G+ + +IT++ 
Sbjct: 99  NISLRYIPVSFMQTIK-SLTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSITELS 157

Query: 66  VNAKGFLCACVAVLSTSLQQITIGSLQKKYSIGSFELLSKTAPIQAVSLLVLG-PFVDYY 124
            N  GF  A    L+TS + I   SL   Y   S   +   AP      ++LG P     
Sbjct: 158 FNVFGFCAALFGCLATSTKTILAESLLHGYKFDSINTVYYMAPFAT---MILGLPAFLLE 214

Query: 125 LNG--KFITTYKMTSGAILFIFLSCALAVFCNVSQYLCIGRFSATSFQVLGHMKTVCVLT 182
            NG   +   +     A++ +F S  LA   N S +  I   +A +F V G++K    + 
Sbjct: 215 RNGILDWFEAHPSPWSALIILFNSGVLAFCLNFSIFYVIQSTTAVTFNVAGNLKVAVAVF 274

Query: 183 LGWLLFDSALTFKNISGMILAVVGMVIYSWAVE--AEKQRNAKTSPQSKNSLTEEEIRLL 240
           + W++F + ++  N  G  + +VG   Y +     +++Q     +P++  +   E I L+
Sbjct: 275 VSWMIFRNPISPMNAVGCGITLVGCTFYGYVRHMLSQQQPGTPRTPRTPRN-KMELIPLV 333

Query: 241 KEGVEN 246
            + +E+
Sbjct: 334 NDKLES 339

GDP-mannose transporter that may be involved in the import of GDP-mannose from the cytoplasm into the Golgi lumen.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LDH3|PT112_ARATH Probable sugar phosphate/phosphate translocator At1g12500 OS=Arabidopsis thaliana GN=At1g12500 PE=2 SV=1

 Score = 55.1 bits (131), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 66/232 (28%), Positives = 109/232 (46%), Gaps = 16/232 (6%)

Query: 1   MSIAGMNFSLMLNSVGFYQISKLSMIPVVCVMEWILHNKHYSKEVKMAVVVVVIGVGVCT 60
           +S+   N SL    V F Q    +      V  +++  K  S EV +A++ VV G+ + +
Sbjct: 137 LSVVCGNTSLRYIPVSFNQAIGATTPFFTAVFSFLITCKTESTEVYLALLPVVSGIVLAS 196

Query: 61  ITDVKVNAKGFLCACVA-----VLSTSLQQITIGSLQKKYSIGSFELLSKTAPIQAVSLL 115
            ++   +  GFL  CVA      L + +Q I + S  +K  + S  LL   AP+ A  LL
Sbjct: 197 NSEPSFHLFGFLI-CVASTAGRALKSVVQGIILTSESEK--LHSMNLLLYMAPMAACILL 253

Query: 116 VLGPFVDYYLNG---KFITTYKMTSGAILFIFLSCA-LAVFCNVSQYLCIGRFSATSFQV 171
              PF   Y+ G   + +     T   I+F+    A +A   N++ +L     SA + QV
Sbjct: 254 ---PF-TLYIEGNVLRVLIEKARTDPLIIFLLAGNATVAYLVNLTNFLVTKHTSALTLQV 309

Query: 172 LGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYSWAVEAEKQRNAK 223
           LG+ K      +  L+F + +T   I+G  + ++G+V+YS A +  K  N K
Sbjct: 310 LGNGKAAVAAGVSVLIFRNPVTVMGIAGFGVTIMGVVLYSEARKRSKLLNQK 361

Arabidopsis thaliana (taxid: 3702)

>sp|Q9VR50|S35E1_DROME Solute carrier family 35 member E1 homolog OS=Drosophila melanogaster GN=CG14621 PE=2 SV=1

 Score = 52.4 bits (124), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 45/218 (20%), Positives = 95/218 (43%)

Query: 14  SVGFYQISKLSMIPVVCVMEWILHNKHYSKEVKMAVVVVVIGVGVCTITDVKVNAKGFLC 73
            V +    K +M     V+  +   +     V ++++ ++ GVG+ T+T++  +  G + 
Sbjct: 103 PVSYAHTVKATMPLFTVVLTRVFFGEKQPTLVYLSLLPIITGVGIATVTEISFDMMGLIS 162

Query: 74  ACVAVLSTSLQQITIGSLQKKYSIGSFELLSKTAPIQAVSLLVLGPFVDYYLNGKFITTY 133
           A ++ +  S+Q I    + K  +I    LL     +     L L  ++D +   +     
Sbjct: 163 ALISTMGFSMQNIFSKKVLKDTNIHHLRLLHLLGKLSLFIFLPLWLYMDSFAVFRHTAIK 222

Query: 134 KMTSGAILFIFLSCALAVFCNVSQYLCIGRFSATSFQVLGHMKTVCVLTLGWLLFDSALT 193
            +    I  +F    L    N+  +  +   +  ++ V    K + V+ +  L+  + +T
Sbjct: 223 NLDYRVIALLFADGVLNWLQNIIAFSVLSLVTPLTYAVASASKRIFVIAVSLLILGNPVT 282

Query: 194 FKNISGMILAVVGMVIYSWAVEAEKQRNAKTSPQSKNS 231
           + N  GM LA+VG++ Y+ A +  + R   T P S+ S
Sbjct: 283 WVNCVGMTLAIVGVLCYNRAKQLTRGREQPTLPLSQTS 320

Putative transporter.

Drosophila melanogaster (taxid: 7227)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	259
356538692	345	PREDICTED: UDP-galactose transporter 2-l	0.996	0.747	0.864	1e-124
363807936	345	uncharacterized protein LOC100780365 [Gl	0.996	0.747	0.868	1e-122
224061801	345	predicted protein [Populus trichocarpa]	1.0	0.750	0.853	1e-121
312281713	348	unnamed protein product [Thellungiella h	0.996	0.741	0.821	1e-121
225457727	344	PREDICTED: UDP-galactose transporter 2 i	1.0	0.752	0.864	1e-121
224086158	345	predicted protein [Populus trichocarpa]	0.996	0.747	0.844	1e-120
255539398	343	organic anion transporter, putative [Ric	0.988	0.746	0.860	1e-119
297842427	347	hypothetical protein ARALYDRAFT_476826 [	0.996	0.743	0.821	1e-119
297850536	348	hypothetical protein ARALYDRAFT_889562 [	0.996	0.741	0.802	1e-118
18411172	347	Nucleotide-sugar transporter family prot	0.996	0.743	0.813	1e-117

>gi|356538692|ref|XP_003537835.1| PREDICTED: UDP-galactose transporter 2-like [Glycine max]

 Score =  449 bits (1155), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 223/258 (86%), Positives = 243/258 (94%)

Query: 1   MSIAGMNFSLMLNSVGFYQISKLSMIPVVCVMEWILHNKHYSKEVKMAVVVVVIGVGVCT 60
           MSI GMNFSLMLNSVGFYQISKLSMIPVVCVMEWILHNKHYS+EVKM+VVVVVIGVGVCT
Sbjct: 87  MSITGMNFSLMLNSVGFYQISKLSMIPVVCVMEWILHNKHYSREVKMSVVVVVIGVGVCT 146

Query: 61  ITDVKVNAKGFLCACVAVLSTSLQQITIGSLQKKYSIGSFELLSKTAPIQAVSLLVLGPF 120
           +TDVKVN KGF+CAC+AVLSTSLQQI+IGSLQKKYSIGSFELLSKTAPIQA+ LL+LGPF
Sbjct: 147 VTDVKVNLKGFMCACIAVLSTSLQQISIGSLQKKYSIGSFELLSKTAPIQALFLLILGPF 206

Query: 121 VDYYLNGKFITTYKMTSGAILFIFLSCALAVFCNVSQYLCIGRFSATSFQVLGHMKTVCV 180
           VDYYL+GK IT YKM+SGAILFI LSC+LAVFCNVSQYLCIGRFSA SFQVLGHMKTVCV
Sbjct: 207 VDYYLSGKLITNYKMSSGAILFILLSCSLAVFCNVSQYLCIGRFSAVSFQVLGHMKTVCV 266

Query: 181 LTLGWLLFDSALTFKNISGMILAVVGMVIYSWAVEAEKQRNAKTSPQSKNSLTEEEIRLL 240
           LTLGWLLFDS LTFKNI GM++AVVGMVIYSWAVE EKQ NAKT P +KNS+TEEEIRLL
Sbjct: 267 LTLGWLLFDSELTFKNIMGMVIAVVGMVIYSWAVELEKQSNAKTLPHAKNSMTEEEIRLL 326

Query: 241 KEGVENTPVKDVELGETK 258
           ++GVE +P+KDVELGE +
Sbjct: 327 RDGVEKSPLKDVELGEAQ 344

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|363807936|ref|NP_001242197.1| uncharacterized protein LOC100780365 [Glycine max] gi|255645046|gb|ACU23022.1| unknown [Glycine max]

 Score =  442 bits (1136), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 224/258 (86%), Positives = 241/258 (93%)

Query: 1   MSIAGMNFSLMLNSVGFYQISKLSMIPVVCVMEWILHNKHYSKEVKMAVVVVVIGVGVCT 60
           MSI GMNFSLMLNSVGFYQISKLSMIPVVCVMEWILHNKH S+EVKM+VVVVVIGVGVCT
Sbjct: 87  MSITGMNFSLMLNSVGFYQISKLSMIPVVCVMEWILHNKHCSREVKMSVVVVVIGVGVCT 146

Query: 61  ITDVKVNAKGFLCACVAVLSTSLQQITIGSLQKKYSIGSFELLSKTAPIQAVSLLVLGPF 120
           +TDVKVN KGF+CAC+AVLSTSLQQI+IGSLQKKYSIGSFELLSKTAPIQA+ LL+LGPF
Sbjct: 147 VTDVKVNLKGFMCACIAVLSTSLQQISIGSLQKKYSIGSFELLSKTAPIQALFLLILGPF 206

Query: 121 VDYYLNGKFITTYKMTSGAILFIFLSCALAVFCNVSQYLCIGRFSATSFQVLGHMKTVCV 180
           VDYYL+GK IT+YKM+SGAIL I LSC+LAVFCNVSQYLCIGRFSA SFQVLGHMKTVCV
Sbjct: 207 VDYYLSGKLITSYKMSSGAILCILLSCSLAVFCNVSQYLCIGRFSAVSFQVLGHMKTVCV 266

Query: 181 LTLGWLLFDSALTFKNISGMILAVVGMVIYSWAVEAEKQRNAKTSPQSKNSLTEEEIRLL 240
           LTLGWLLFDS LTFKNI GMI+AVVGMVIYSWAVE EKQ NAKT P  KNS+TEEEIRLL
Sbjct: 267 LTLGWLLFDSELTFKNIMGMIIAVVGMVIYSWAVELEKQSNAKTLPHVKNSMTEEEIRLL 326

Query: 241 KEGVENTPVKDVELGETK 258
           K GVEN+P+KDVELGE +
Sbjct: 327 KVGVENSPLKDVELGEAQ 344

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224061801|ref|XP_002300605.1| predicted protein [Populus trichocarpa] gi|222842331|gb|EEE79878.1| predicted protein [Populus trichocarpa]

 Score =  439 bits (1130), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 221/259 (85%), Positives = 245/259 (94%)

Query: 1   MSIAGMNFSLMLNSVGFYQISKLSMIPVVCVMEWILHNKHYSKEVKMAVVVVVIGVGVCT 60
           +SI GMN SLMLNSVGFYQISKLSMIPVVC+MEWILH+K YSKEVK++V+VVVIGVGVCT
Sbjct: 87  VSITGMNLSLMLNSVGFYQISKLSMIPVVCIMEWILHSKQYSKEVKLSVLVVVIGVGVCT 146

Query: 61  ITDVKVNAKGFLCACVAVLSTSLQQITIGSLQKKYSIGSFELLSKTAPIQAVSLLVLGPF 120
           +TDVKVNAKGF+CAC+AVLSTSLQQITIGSLQKKYSIGSFELLS+TAPIQAVSLL+LGPF
Sbjct: 147 VTDVKVNAKGFICACLAVLSTSLQQITIGSLQKKYSIGSFELLSRTAPIQAVSLLILGPF 206

Query: 121 VDYYLNGKFITTYKMTSGAILFIFLSCALAVFCNVSQYLCIGRFSATSFQVLGHMKTVCV 180
           +DYYLNGKFIT YK++SGAILFI LSC+LAVFCNVSQYLCIGRFSATSFQVLGHMKT+CV
Sbjct: 207 IDYYLNGKFITNYKLSSGAILFIILSCSLAVFCNVSQYLCIGRFSATSFQVLGHMKTICV 266

Query: 181 LTLGWLLFDSALTFKNISGMILAVVGMVIYSWAVEAEKQRNAKTSPQSKNSLTEEEIRLL 240
           LTLGWLLFDS LTFKNI GM +AV+GMV+YSWAVEAEK  NA+T+  SKNSLTEEEIRLL
Sbjct: 267 LTLGWLLFDSELTFKNIMGMFIAVLGMVVYSWAVEAEKSLNARTTSYSKNSLTEEEIRLL 326

Query: 241 KEGVENTPVKDVELGETKE 259
           KEGVE+ P+KDVEL E+KE
Sbjct: 327 KEGVESMPLKDVELAESKE 345

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|312281713|dbj|BAJ33722.1| unnamed protein product [Thellungiella halophila]

 Score =  439 bits (1128), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 212/258 (82%), Positives = 243/258 (94%)

Query: 1   MSIAGMNFSLMLNSVGFYQISKLSMIPVVCVMEWILHNKHYSKEVKMAVVVVVIGVGVCT 60
           +SIA MNFSLMLNSVGFYQISKLSMIPVVCV+EWILH+KHYSKEVK +V+VVV+GVG+CT
Sbjct: 90  VSIAAMNFSLMLNSVGFYQISKLSMIPVVCVLEWILHSKHYSKEVKASVMVVVVGVGICT 149

Query: 61  ITDVKVNAKGFLCACVAVLSTSLQQITIGSLQKKYSIGSFELLSKTAPIQAVSLLVLGPF 120
           +TDVKVNAKGF+CAC AV STSLQQI+IGSLQKKYS+GSFELLSKTAPIQA+SLL+ GPF
Sbjct: 150 VTDVKVNAKGFICACTAVFSTSLQQISIGSLQKKYSVGSFELLSKTAPIQAISLLIFGPF 209

Query: 121 VDYYLNGKFITTYKMTSGAILFIFLSCALAVFCNVSQYLCIGRFSATSFQVLGHMKTVCV 180
           VDY+L+G+FITTYKMT GAI  I LSCALAVFCN+SQYLCIGRFSATSFQVLGHMKTVCV
Sbjct: 210 VDYFLSGRFITTYKMTYGAIFCILLSCALAVFCNISQYLCIGRFSATSFQVLGHMKTVCV 269

Query: 181 LTLGWLLFDSALTFKNISGMILAVVGMVIYSWAVEAEKQRNAKTSPQSKNSLTEEEIRLL 240
           LTLGWLLFDS +TFKNI+GM+LAVVGMVIYSWAV+ EKQRN+K++P  KNS+TE++I+LL
Sbjct: 270 LTLGWLLFDSEMTFKNIAGMVLAVVGMVIYSWAVDLEKQRNSKSTPHGKNSMTEDKIKLL 329

Query: 241 KEGVENTPVKDVELGETK 258
           KEG+E+  +KDVELGETK
Sbjct: 330 KEGIEHMDLKDVELGETK 347

Source: Thellungiella halophila

Species: Eutrema halophilum

Genus: Eutrema

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225457727|ref|XP_002278064.1| PREDICTED: UDP-galactose transporter 2 isoform 1 [Vitis vinifera] gi|297745642|emb|CBI40807.3| unnamed protein product [Vitis vinifera]

 Score =  439 bits (1128), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 224/259 (86%), Positives = 244/259 (94%)

Query: 1   MSIAGMNFSLMLNSVGFYQISKLSMIPVVCVMEWILHNKHYSKEVKMAVVVVVIGVGVCT 60
           MSI GMN SLMLNSVGFYQISKLSMIPVVCVMEWILHNKHYS+EVK++VVVVVIGVGVCT
Sbjct: 86  MSITGMNLSLMLNSVGFYQISKLSMIPVVCVMEWILHNKHYSREVKISVVVVVIGVGVCT 145

Query: 61  ITDVKVNAKGFLCACVAVLSTSLQQITIGSLQKKYSIGSFELLSKTAPIQAVSLLVLGPF 120
           +TDVKVNAKGF+CACVAV+STSLQQI+IGSLQKKYSIGSFELLSKTAPIQ++SLLVLGPF
Sbjct: 146 VTDVKVNAKGFICACVAVVSTSLQQISIGSLQKKYSIGSFELLSKTAPIQSISLLVLGPF 205

Query: 121 VDYYLNGKFITTYKMTSGAILFIFLSCALAVFCNVSQYLCIGRFSATSFQVLGHMKTVCV 180
           +DY+LNGKFIT YK++SG I FI LSC+LAVFCNVSQYLCIGRFSA SFQVLGHMKTVCV
Sbjct: 206 IDYFLNGKFITNYKLSSGVIFFILLSCSLAVFCNVSQYLCIGRFSAVSFQVLGHMKTVCV 265

Query: 181 LTLGWLLFDSALTFKNISGMILAVVGMVIYSWAVEAEKQRNAKTSPQSKNSLTEEEIRLL 240
           LTLGWLLFDS LTFKNISGMI+AVVGM+IYSWAVE EKQ NAKT    KNSLTEEEIRLL
Sbjct: 266 LTLGWLLFDSELTFKNISGMIVAVVGMIIYSWAVEIEKQANAKTMSNVKNSLTEEEIRLL 325

Query: 241 KEGVENTPVKDVELGETKE 259
           K+G+E TPVKD+ELGE+KE
Sbjct: 326 KDGIEKTPVKDIELGESKE 344

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224086158|ref|XP_002307836.1| predicted protein [Populus trichocarpa] gi|222857285|gb|EEE94832.1| predicted protein [Populus trichocarpa]

 Score =  435 bits (1118), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 218/258 (84%), Positives = 244/258 (94%)

Query: 1   MSIAGMNFSLMLNSVGFYQISKLSMIPVVCVMEWILHNKHYSKEVKMAVVVVVIGVGVCT 60
           +SI GMN SLMLNSVGFYQISKLSMIPVVC+MEWI+H+K YSKEVK++V+VVVIGVGVCT
Sbjct: 87  VSITGMNLSLMLNSVGFYQISKLSMIPVVCIMEWIIHSKQYSKEVKLSVLVVVIGVGVCT 146

Query: 61  ITDVKVNAKGFLCACVAVLSTSLQQITIGSLQKKYSIGSFELLSKTAPIQAVSLLVLGPF 120
           +TDVKVNAKGF+CAC+AVLSTSLQQITIGSLQKKYSIGSFELLS+TAPIQA+SLL+LGPF
Sbjct: 147 VTDVKVNAKGFICACLAVLSTSLQQITIGSLQKKYSIGSFELLSRTAPIQALSLLILGPF 206

Query: 121 VDYYLNGKFITTYKMTSGAILFIFLSCALAVFCNVSQYLCIGRFSATSFQVLGHMKTVCV 180
           +DYYLNGKFIT YK++SGAILFI LSC+LAVFCNVSQYLCIGRFSATSFQVLGHMKT+CV
Sbjct: 207 IDYYLNGKFITHYKISSGAILFIILSCSLAVFCNVSQYLCIGRFSATSFQVLGHMKTICV 266

Query: 181 LTLGWLLFDSALTFKNISGMILAVVGMVIYSWAVEAEKQRNAKTSPQSKNSLTEEEIRLL 240
           LTLGWLLFDS LTFKNI GM++AVVGMV+YSWAVEAEK  NAKT P +KNSLTEEEIRLL
Sbjct: 267 LTLGWLLFDSELTFKNIMGMVIAVVGMVVYSWAVEAEKSSNAKTVPHTKNSLTEEEIRLL 326

Query: 241 KEGVENTPVKDVELGETK 258
           KEGVE+ P+KD+EL  +K
Sbjct: 327 KEGVESMPLKDLELSVSK 344

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255539398|ref|XP_002510764.1| organic anion transporter, putative [Ricinus communis] gi|223551465|gb|EEF52951.1| organic anion transporter, putative [Ricinus communis]

 Score =  434 bits (1115), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 222/258 (86%), Positives = 244/258 (94%), Gaps = 2/258 (0%)

Query: 1   MSIAGMNFSLMLNSVGFYQISKLSMIPVVCVMEWILHNKHYSKEVKMAVVVVVIGVGVCT 60
           MSI  MNFSLMLNSVGFYQISKLSMIPVVC+MEWILH+KHYSKEVK++V+VVV GVGVCT
Sbjct: 87  MSITCMNFSLMLNSVGFYQISKLSMIPVVCIMEWILHSKHYSKEVKLSVLVVVTGVGVCT 146

Query: 61  ITDVKVNAKGFLCACVAVLSTSLQQITIGSLQKKYSIGSFELLSKTAPIQAVSLLVLGPF 120
           +TDVKVNAKGF+CAC+AVLSTSLQQITIGSLQKKYSIGSFELLSKTAPIQA+SLLVLGPF
Sbjct: 147 VTDVKVNAKGFICACLAVLSTSLQQITIGSLQKKYSIGSFELLSKTAPIQAISLLVLGPF 206

Query: 121 VDYYLNGKFITTYKMTSGAILFIFLSCALAVFCNVSQYLCIGRFSATSFQVLGHMKTVCV 180
           VDYYLNGKFI+TYKM++GAILFI LSC LAVFCN+SQYLCIGRFSATSFQVLGHMKTVCV
Sbjct: 207 VDYYLNGKFISTYKMSTGAILFILLSCLLAVFCNMSQYLCIGRFSATSFQVLGHMKTVCV 266

Query: 181 LTLGWLLFDSALTFKNISGMILAVVGMVIYSWAVEAEKQRNAKTSPQSKNSLTEEEIRLL 240
           LTLGWLLFDS LTFKNI GM++AV GMV+YSWAVEAEK  +AK    +KNSLTEEEIRLL
Sbjct: 267 LTLGWLLFDSELTFKNIMGMVIAVAGMVVYSWAVEAEK--SAKALAHAKNSLTEEEIRLL 324

Query: 241 KEGVENTPVKDVELGETK 258
           KEG+E++PVKDVELGE+K
Sbjct: 325 KEGMESSPVKDVELGESK 342

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297842427|ref|XP_002889095.1| hypothetical protein ARALYDRAFT_476826 [Arabidopsis lyrata subsp. lyrata] gi|297334936|gb|EFH65354.1| hypothetical protein ARALYDRAFT_476826 [Arabidopsis lyrata subsp. lyrata]

 Score =  432 bits (1112), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 212/258 (82%), Positives = 240/258 (93%)

Query: 1   MSIAGMNFSLMLNSVGFYQISKLSMIPVVCVMEWILHNKHYSKEVKMAVVVVVIGVGVCT 60
           +SIA MNFSLMLNSVGFYQISKLSMIPVVCV+EWILH+KHY KEVK +V+VVVIGVG+CT
Sbjct: 89  ISIAAMNFSLMLNSVGFYQISKLSMIPVVCVLEWILHSKHYCKEVKASVMVVVIGVGICT 148

Query: 61  ITDVKVNAKGFLCACVAVLSTSLQQITIGSLQKKYSIGSFELLSKTAPIQAVSLLVLGPF 120
           +TDVKVNAKGF+CAC AV STSLQQI+IGSLQKKYS+GSFELLSKTAPIQA+SLL+ GPF
Sbjct: 149 VTDVKVNAKGFICACTAVFSTSLQQISIGSLQKKYSVGSFELLSKTAPIQAISLLIFGPF 208

Query: 121 VDYYLNGKFITTYKMTSGAILFIFLSCALAVFCNVSQYLCIGRFSATSFQVLGHMKTVCV 180
           VDY+L+GKFI+TYKMT GAI  I LSCALAVFCN+SQYLCIGRFSATSFQVLGHMKTVCV
Sbjct: 209 VDYFLSGKFISTYKMTYGAIFCILLSCALAVFCNISQYLCIGRFSATSFQVLGHMKTVCV 268

Query: 181 LTLGWLLFDSALTFKNISGMILAVVGMVIYSWAVEAEKQRNAKTSPQSKNSLTEEEIRLL 240
           LTLGWLLFDS +TFKNI+GM +A+VGMVIYSWAV+ EKQRNAK +P  KNS+TE+EI+LL
Sbjct: 269 LTLGWLLFDSEMTFKNIAGMAIAIVGMVIYSWAVDLEKQRNAKLTPHGKNSMTEDEIKLL 328

Query: 241 KEGVENTPVKDVELGETK 258
           KEGVE+  +KDVELG+TK
Sbjct: 329 KEGVEHIDLKDVELGDTK 346

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297850536|ref|XP_002893149.1| hypothetical protein ARALYDRAFT_889562 [Arabidopsis lyrata subsp. lyrata] gi|297338991|gb|EFH69408.1| hypothetical protein ARALYDRAFT_889562 [Arabidopsis lyrata subsp. lyrata]

 Score =  430 bits (1106), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 207/258 (80%), Positives = 240/258 (93%)

Query: 1   MSIAGMNFSLMLNSVGFYQISKLSMIPVVCVMEWILHNKHYSKEVKMAVVVVVIGVGVCT 60
           +SIA MNFSLMLNSVGFYQISKLSMIPVVCVMEW+LH+KHYS+EVK +V+VVV+GVG+CT
Sbjct: 90  ISIAAMNFSLMLNSVGFYQISKLSMIPVVCVMEWVLHSKHYSREVKASVMVVVVGVGICT 149

Query: 61  ITDVKVNAKGFLCACVAVLSTSLQQITIGSLQKKYSIGSFELLSKTAPIQAVSLLVLGPF 120
           +TDVKVNAKGF+CAC AV STSLQQI+IGSLQKKYSIGSFELLSKTAPIQA+SLL+ GPF
Sbjct: 150 VTDVKVNAKGFICACTAVFSTSLQQISIGSLQKKYSIGSFELLSKTAPIQAISLLIFGPF 209

Query: 121 VDYYLNGKFITTYKMTSGAILFIFLSCALAVFCNVSQYLCIGRFSATSFQVLGHMKTVCV 180
           VDY+L+G+FI+TYKMT GA+L I LSCALAVFCN+SQYLCIGRFSATSFQVLGHMKTVCV
Sbjct: 210 VDYFLSGRFISTYKMTYGAMLCILLSCALAVFCNISQYLCIGRFSATSFQVLGHMKTVCV 269

Query: 181 LTLGWLLFDSALTFKNISGMILAVVGMVIYSWAVEAEKQRNAKTSPQSKNSLTEEEIRLL 240
           LTLGWL+FDS +TFKNI+GM+LAVVGMVIYSWAVE EKQR +K +P  K+S+TE+EI+LL
Sbjct: 270 LTLGWLIFDSEMTFKNIAGMVLAVVGMVIYSWAVELEKQRKSKVTPHGKHSMTEDEIKLL 329

Query: 241 KEGVENTPVKDVELGETK 258
           KEG+E+  +KD+ELG  K
Sbjct: 330 KEGIEHMDLKDMELGNNK 347

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18411172|ref|NP_565138.1| Nucleotide-sugar transporter family protein [Arabidopsis thaliana] gi|75207337|sp|Q9SRE4.1|UGAL2_ARATH RecName: Full=UDP-galactose transporter 2; Short=At-UDP-GalT2 gi|6143887|gb|AAF04433.1|AC010718_2 unknown protein; 11341-9662 [Arabidopsis thaliana] gi|14532698|gb|AAK64150.1| unknown protein [Arabidopsis thaliana] gi|16604380|gb|AAL24196.1| At1g76670/F28O16_4 [Arabidopsis thaliana] gi|18491195|gb|AAL69500.1| unknown protein [Arabidopsis thaliana] gi|23308311|gb|AAN18125.1| At1g76670/F28O16_4 [Arabidopsis thaliana] gi|46934766|emb|CAG18177.1| UDP-galactose transporter [Arabidopsis thaliana] gi|332197752|gb|AEE35873.1| Nucleotide-sugar transporter family protein [Arabidopsis thaliana]

 Score =  428 bits (1100), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 210/258 (81%), Positives = 240/258 (93%)

Query: 1   MSIAGMNFSLMLNSVGFYQISKLSMIPVVCVMEWILHNKHYSKEVKMAVVVVVIGVGVCT 60
           +SIA MNFSLMLNSVGFYQISKLSMIPVVCV+EWILH+KHY KEVK +V+VVVIGVG+CT
Sbjct: 89  ISIAAMNFSLMLNSVGFYQISKLSMIPVVCVLEWILHSKHYCKEVKASVMVVVIGVGICT 148

Query: 61  ITDVKVNAKGFLCACVAVLSTSLQQITIGSLQKKYSIGSFELLSKTAPIQAVSLLVLGPF 120
           +TDVKVNAKGF+CAC AV STSLQQI+IGSLQKKYS+GSFELLSKTAPIQA+SLL+ GPF
Sbjct: 149 VTDVKVNAKGFICACTAVFSTSLQQISIGSLQKKYSVGSFELLSKTAPIQAISLLICGPF 208

Query: 121 VDYYLNGKFITTYKMTSGAILFIFLSCALAVFCNVSQYLCIGRFSATSFQVLGHMKTVCV 180
           VDY L+GKFI+TY+MT GAI  I LSCALAVFCN+SQYLCIGRFSATSFQVLGHMKTVCV
Sbjct: 209 VDYLLSGKFISTYQMTYGAIFCILLSCALAVFCNISQYLCIGRFSATSFQVLGHMKTVCV 268

Query: 181 LTLGWLLFDSALTFKNISGMILAVVGMVIYSWAVEAEKQRNAKTSPQSKNSLTEEEIRLL 240
           LTLGWLLFDS +TFKNI+GM +A+VGMVIYSWAV+ EKQRNAK++P  K+S+TE+EI+LL
Sbjct: 269 LTLGWLLFDSEMTFKNIAGMAIAIVGMVIYSWAVDIEKQRNAKSTPHGKHSMTEDEIKLL 328

Query: 241 KEGVENTPVKDVELGETK 258
           KEGVE+  +KDVELG+TK
Sbjct: 329 KEGVEHIDLKDVELGDTK 346

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	259
TAIR|locus:2030076	347	AT1G76670 [Arabidopsis thalian	0.996	0.743	0.763	6.7e-104
TAIR|locus:2199557	348	AT1G21070 [Arabidopsis thalian	0.996	0.741	0.751	7.7e-103
TAIR|locus:2162271	350	AT5G42420 [Arabidopsis thalian	1.0	0.74	0.735	5.8e-98
TAIR|locus:2122467	337	NST-K1 "nucleotide sugar trans	0.903	0.694	0.468	8e-53
TAIR|locus:2118514	335	AT4G09810 [Arabidopsis thalian	0.903	0.698	0.470	2.4e-51
TAIR|locus:2009076	335	AT1G34020 [Arabidopsis thalian	0.880	0.680	0.476	3.6e-50
TAIR|locus:2064316	353	AT2G30460 "AT2G30460" [Arabido	0.876	0.643	0.390	4.6e-41
TAIR|locus:2033097	357	AT1G06890 [Arabidopsis thalian	0.891	0.647	0.370	1.4e-39
TAIR|locus:504955965	342	AT2G28315 [Arabidopsis thalian	0.864	0.654	0.36	7.2e-36
UNIPROTKB|A4IFK2	313	SLC35E3 "Solute carrier family	0.830	0.686	0.278	1.1e-21

TAIR|locus:2030076 AT1G76670 [Arabidopsis thaliana (taxid:3702)]

 Score = 1029 (367.3 bits), Expect = 6.7e-104, P = 6.7e-104
 Identities = 197/258 (76%), Positives = 224/258 (86%)

Query:     1 MSIAGMNFSLMLNSVGFYQISKLSMIPVVCVMEWILHNKHYSKEVKMAXXXXXXXXXXXX 60
             +SIA MNFSLMLNSVGFYQISKLSMIPVVCV+EWILH+KHY KEVK +            
Sbjct:    89 ISIAAMNFSLMLNSVGFYQISKLSMIPVVCVLEWILHSKHYCKEVKASVMVVVIGVGICT 148

Query:    61 XXXXKVNAKGFLCACVAVLSTSLQQITIGSLQKKYSIGSFELLSKTAPIQAVSLLVLGPF 120
                 KVNAKGF+CAC AV STSLQQI+IGSLQKKYS+GSFELLSKTAPIQA+SLL+ GPF
Sbjct:   149 VTDVKVNAKGFICACTAVFSTSLQQISIGSLQKKYSVGSFELLSKTAPIQAISLLICGPF 208

Query:   121 VDYYLNGKFITTYKMTSGAILFIFLSCALAVFCNVSQYLCIGRFSATSFQVLGHMKTVCV 180
             VDY L+GKFI+TY+MT GAI  I LSCALAVFCN+SQYLCIGRFSATSFQVLGHMKTVCV
Sbjct:   209 VDYLLSGKFISTYQMTYGAIFCILLSCALAVFCNISQYLCIGRFSATSFQVLGHMKTVCV 268

Query:   181 LTLGWLLFDSALTFKNISGMILAVVGMVIYSWAVEAEKQRNAKTSPQSKNSLTEEEIRLL 240
             LTLGWLLFDS +TFKNI+GM +A+VGMVIYSWAV+ EKQRNAK++P  K+S+TE+EI+LL
Sbjct:   269 LTLGWLLFDSEMTFKNIAGMAIAIVGMVIYSWAVDIEKQRNAKSTPHGKHSMTEDEIKLL 328

Query:   241 KEGVENTPVKDVELGETK 258
             KEGVE+  +KDVELG+TK
Sbjct:   329 KEGVEHIDLKDVELGDTK 346

GO:0005886 "plasma membrane" evidence=ISM

GO:0016020 "membrane" evidence=ISS

GO:0005457 "GDP-fucose transmembrane transporter activity" evidence=IDA

GO:0005459 "UDP-galactose transmembrane transporter activity" evidence=IDA

GO:0005460 "UDP-glucose transmembrane transporter activity" evidence=IDA

GO:0015783 "GDP-fucose transport" evidence=IDA

GO:0015786 "UDP-glucose transport" evidence=IDA

GO:0072334 "UDP-galactose transmembrane transport" evidence=IDA

GO:0009624 "response to nematode" evidence=IEP

GO:0006863 "purine nucleobase transport" evidence=RCA

TAIR|locus:2199557 AT1G21070 [Arabidopsis thaliana (taxid:3702)]

 Score = 1019 (363.8 bits), Expect = 7.7e-103, P = 7.7e-103
 Identities = 194/258 (75%), Positives = 222/258 (86%)

Query:     1 MSIAGMNFSLMLNSVGFYQISKLSMIPVVCVMEWILHNKHYSKEVKMAXXXXXXXXXXXX 60
             +SIA MNFSLMLNSVGFYQISKLSMIPVVCVMEW+LH+KHYS+EVK +            
Sbjct:    90 ISIAAMNFSLMLNSVGFYQISKLSMIPVVCVMEWVLHSKHYSREVKASVMVVVVGVGICT 149

Query:    61 XXXXKVNAKGFLCACVAVLSTSLQQITIGSLQKKYSIGSFELLSKTAPIQAVSLLVLGPF 120
                 KVNAKGF+CAC AV STSLQQI+IGSLQKKYSIGSFELLSKTAPIQA+SLL+ GPF
Sbjct:   150 VTDVKVNAKGFICACTAVFSTSLQQISIGSLQKKYSIGSFELLSKTAPIQAISLLIFGPF 209

Query:   121 VDYYLNGKFITTYKMTSGAILFIFLSCALAVFCNVSQYLCIGRFSATSFQVLGHMKTVCV 180
             VDY+L+G+FI+TYKMT  A+L I LSCALAVFCN+SQYLCIGRFSATSFQVLGHMKTVCV
Sbjct:   210 VDYFLSGRFISTYKMTYSAMLCILLSCALAVFCNISQYLCIGRFSATSFQVLGHMKTVCV 269

Query:   181 LTLGWLLFDSALTFKNISGMILAVVGMVIYSWAVEAEKQRNAKTSPQSKNSLTEEEIRLL 240
             LTLGWL+FDS +TFKNI+GM+LAVVGMVIYSWAVE EKQR +K  P  K+S+TE+EI+LL
Sbjct:   270 LTLGWLIFDSEMTFKNIAGMVLAVVGMVIYSWAVELEKQRKSKVIPHGKHSMTEDEIKLL 329

Query:   241 KEGVENTPVKDVELGETK 258
             KEG+E+  +KD+ELG  K
Sbjct:   330 KEGIEHMDLKDMELGNNK 347

GO:0005886 "plasma membrane" evidence=ISM

GO:0016020 "membrane" evidence=ISS

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0006863 "purine nucleobase transport" evidence=RCA

TAIR|locus:2162271 AT5G42420 [Arabidopsis thaliana (taxid:3702)]

 Score = 973 (347.6 bits), Expect = 5.8e-98, P = 5.8e-98
 Identities = 192/261 (73%), Positives = 214/261 (81%)

Query:     1 MSIAGMNFSLMLNSVGFYQISKLSMIPVVCVMEWILHNKHYSKEVKMAXXXXXXXXXXXX 60
             +SIA MNFSLMLNSVGFYQISKLSMIPVVCVMEWILH+K YS+EVK++            
Sbjct:    90 VSIAAMNFSLMLNSVGFYQISKLSMIPVVCVMEWILHSKRYSREVKISVVVVVVGVGICT 149

Query:    61 XXXXKVNAKGFLCACVAVLSTSLQQITIGSLQKKYSIGSFELLSKTAPIQAVSLLVLGPF 120
                 KVNAKGF+CACVA+ S+SLQQI IGSLQKKYSIGSFELLSKTAPIQA SLLV+GP 
Sbjct:   150 VTDVKVNAKGFICACVAIFSSSLQQILIGSLQKKYSIGSFELLSKTAPIQAFSLLVVGPL 209

Query:   121 VDYYLNGKFITTYKMTSGAILFIFLSCALAVFCNVSQYLCIGRFSATSFQVLGHMKTVCV 180
             VDY L+GKFI  Y M+SG  LFI LSC LAVFCN+SQYLCIGRFSA SFQV+GHMKTVC+
Sbjct:   210 VDYLLSGKFIMKYNMSSGCFLFILLSCGLAVFCNISQYLCIGRFSAVSFQVIGHMKTVCI 269

Query:   181 LTLGWLLFDSALTFKNISGMILAVVGMVIYSWAVEAEKQR--NAKTSPQSKNSLTEEEIR 238
             LTLGWLLFDSA+TFKN++GMI+A+VGMVIYSWA+E EKQ    AK     K+SLTEEE  
Sbjct:   270 LTLGWLLFDSAMTFKNVAGMIVAIVGMVIYSWAMELEKQSIIAAKALNSVKHSLTEEEFE 329

Query:   239 LLKEGVENTPVKDVELGETKE 259
             LLKEGVE T  KDVELG TK+
Sbjct:   330 LLKEGVETTQSKDVELGRTKD 350

GO:0005886 "plasma membrane" evidence=ISM

GO:0009507 "chloroplast" evidence=ISM

GO:0016020 "membrane" evidence=ISS

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0006863 "purine nucleobase transport" evidence=RCA

TAIR|locus:2122467 NST-K1 "nucleotide sugar transporter-KT 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 547 (197.6 bits), Expect = 8.0e-53, P = 8.0e-53
 Identities = 111/237 (46%), Positives = 156/237 (65%)

Query:     2 SIAGMNFSLMLNSVGFYQISKLSMIPVVCVMEWILHNKHYSKEVKMAXXXXXXXXXXXXX 61
             SI GMN SLM NSVGFYQI+KLSMIPV C++E +L N  YS++ K++             
Sbjct:    93 SIVGMNVSLMWNSVGFYQIAKLSMIPVSCLLEVMLDNVRYSRDTKLSILLVLAGVAVCTV 152

Query:    62 XXXKVNAKGFLCACVAVLSTSLQQITIGSLQKKYSIGSFELLSKTAPIQAVSLLVLGPFV 121
                 VN  GFL A +AV ST+LQQ  +  LQ+KYS+GSF LL+ TAP+QA SLL++GPF+
Sbjct:   153 TDVSVNLNGFLAAAIAVWSTALQQYYVHYLQRKYSLGSFNLLAHTAPVQAASLLLVGPFL 212

Query:   122 DYYLNGKFITTYKMTSGAILFIFLSCALAVFCNVSQYLCIGRFSATSFQVLGHMKTVCVL 181
             DY+L  + +  Y  +  ++ F+ LSC++AV  N+SQ++CIGRF+A SFQVLGHMKT+ VL
Sbjct:   213 DYWLTNQRVDAYNFSFVSLFFLILSCSIAVGTNLSQFICIGRFTAVSFQVLGHMKTILVL 272

Query:   182 TLGWLLFDS-ALTFKNISGMILAVVGMVIYSWAVEAE--KQRNAKTSPQSKNSLTEE 235
              LG+  F    L  + + GM++A++GM+ Y  A      K+R + + P +K+    E
Sbjct:   273 VLGFTFFGKEGLNLQVVLGMLIAILGMIWYGNASSKPGGKERRSLSIPITKSQKLSE 329

GO:0005886 "plasma membrane" evidence=ISM

GO:0000139 "Golgi membrane" evidence=IDA

GO:0005338 "nucleotide-sugar transmembrane transporter activity" evidence=IDA

GO:0015780 "nucleotide-sugar transport" evidence=IDA

GO:0055085 "transmembrane transport" evidence=IDA

GO:0006863 "purine nucleobase transport" evidence=RCA

TAIR|locus:2118514 AT4G09810 [Arabidopsis thaliana (taxid:3702)]

 Score = 533 (192.7 bits), Expect = 2.4e-51, P = 2.4e-51
 Identities = 113/240 (47%), Positives = 152/240 (63%)

Query:     2 SIAGMNFSLMLNSVGFYQISKLSMIPVVCVMEWILHNKHYSKEVKMAXXXXXXXXXXXXX 61
             SI GMN SLM NSVGFYQI+KLSMIPV C++E +     YS++ K++             
Sbjct:    88 SIVGMNVSLMWNSVGFYQIAKLSMIPVSCLLEVVFDKIRYSRDTKLSIGLVLVGVGVCTV 147

Query:    62 XXXKVNAKGFLCACVAVLSTSLQQITIGSLQKKYSIGSFELLSKTAPIQAVSLLVLGPFV 121
                 VN KGF+ A VAV ST+LQQ  +  LQ+KYS+ SF LL  TAP QA +LL++GPF+
Sbjct:   148 TDVSVNTKGFVAAFVAVWSTALQQYYVHYLQRKYSLSSFNLLGHTAPAQAATLLIVGPFL 207

Query:   122 DYYLNGKFITTYKMTSGAILFIFLSCALAVFCNVSQYLCIGRFSATSFQVLGHMKTVCVL 181
             DY+L  K +  Y   S +++FI LSC +A+  N+SQ++CIGRF+A SFQVLGHMKT+ VL
Sbjct:   208 DYWLTDKRVDMYDYNSVSVMFITLSCTIAIGTNLSQFICIGRFTAVSFQVLGHMKTILVL 267

Query:   182 TLGWLLFD-SALTFKNISGMILAVVGMVIYSWAV-----EAEKQRNAKTSPQSKNSLTEE 235
              +G+  FD   L    I GMI+AV+GM+ Y  A      + +K  +  T+ Q K   T +
Sbjct:   268 VMGFFFFDRDGLNLHVILGMIIAVLGMIWYGNASSKPGGKEKKNYSLPTTRQQKLGATSD 327

GO:0005886 "plasma membrane" evidence=ISM

GO:0016020 "membrane" evidence=ISS

GO:0006863 "purine nucleobase transport" evidence=RCA

TAIR|locus:2009076 AT1G34020 [Arabidopsis thaliana (taxid:3702)]

 Score = 522 (188.8 bits), Expect = 3.6e-50, P = 3.6e-50
 Identities = 110/231 (47%), Positives = 147/231 (63%)

Query:     2 SIAGMNFSLMLNSVGFYQISKLSMIPVVCVMEWILHNKHYSKEVKMAXXXXXXXXXXXXX 61
             SI GMN SLM NSVGFYQI+KLSMIPV C++E +     YS++ K++             
Sbjct:    88 SIVGMNVSLMWNSVGFYQIAKLSMIPVSCLLEMVFDKIRYSRDTKLSIGLVLVGVGVCTV 147

Query:    62 XXXKVNAKGFLCACVAVLSTSLQQITIGSLQKKYSIGSFELLSKTAPIQAVSLLVLGPFV 121
                 VN KGF+ A VAV ST+LQQ  +  LQ+KYS+ SF LL  TAP QA +LLV+GPF+
Sbjct:   148 TDVSVNTKGFVAAFVAVWSTALQQYYVHYLQRKYSLNSFNLLGHTAPAQAATLLVVGPFL 207

Query:   122 DYYLNGKFITTYKMTSGAILFIFLSCALAVFCNVSQYLCIGRFSATSFQVLGHMKTVCVL 181
             DY+L  K +  Y     ++LFI LSC +A+  N+SQ++CIGRF+A SFQVLGHMKT+ VL
Sbjct:   208 DYWLTEKRVDMYDYNLVSVLFITLSCTIAIGTNLSQFICIGRFTAVSFQVLGHMKTILVL 267

Query:   182 TLGWLLFD-SALTFKNISGMILAVVGMVIYSWAVEAE--KQRNAKTSPQSK 229
              +G+  F    L    + GMI+AV+GM+ Y  A      K+R   + P ++
Sbjct:   268 IMGFFFFGREGLNLHVVVGMIIAVLGMIWYGNASSKPGGKERRNYSLPTTR 318

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0016020 "membrane" evidence=ISS

GO:0006863 "purine nucleobase transport" evidence=RCA

TAIR|locus:2064316 AT2G30460 "AT2G30460" [Arabidopsis thaliana (taxid:3702)]

 Score = 436 (158.5 bits), Expect = 4.6e-41, P = 4.6e-41
 Identities = 89/228 (39%), Positives = 142/228 (62%)

Query:     1 MSIAGMNFSLMLNSVGFYQISKLSMIPVVCVMEWILHNKHYSKEVKMAXXXXXXXXXXXX 60
             +SI  +N SL  NSVGFYQ++KL++IP   V+E I   K +S++++ +            
Sbjct:    84 ISIGLLNLSLGFNSVGFYQMTKLAIIPCTVVLETIFFRKMFSRKIQFSLVILLLGVGIAT 143

Query:    61 XXXXKVNAKGFLCACVAVLSTSLQQITIGSLQKKYSIGSFELLSKTAPIQAVSLLVLGPF 120
                 ++N  G + + +AV++T + QI   ++QKKY + S +LL ++ P QA++L V GPF
Sbjct:   144 VTDLQLNMLGSVLSLLAVITTCVAQIMTNTIQKKYKVSSTQLLYQSCPYQAITLFVTGPF 203

Query:   121 VDYYLNGKFITTYKMTSGAILFIFLSCALAVFCNVSQYLCIGRFSATSFQVLGHMKTVCV 180
             +D  L  + +  +K TS  + FI LSC ++V  N S +L IG+ S  ++QVLGH+KT  V
Sbjct:   204 LDGLLTNQNVFAFKYTSQVVFFIVLSCLISVSVNFSTFLVIGKTSPVTYQVLGHLKTCLV 263

Query:   181 LTLGWLLFDSALTFKNISGMILAVVGMVIYSWAVEAEKQRNA-KTSPQ 227
             L  G+LL   A +++NI G+++AV+GMV+YS+    E Q+ A +TS Q
Sbjct:   264 LAFGYLLLKDAFSWRNILGILVAVIGMVLYSYYCTLETQQKATETSTQ 311

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=ISS

GO:0006863 "purine nucleobase transport" evidence=RCA

TAIR|locus:2033097 AT1G06890 [Arabidopsis thaliana (taxid:3702)]

 Score = 422 (153.6 bits), Expect = 1.4e-39, P = 1.4e-39
 Identities = 87/235 (37%), Positives = 143/235 (60%)

Query:     1 MSIAGMNFSLMLNSVGFYQISKLSMIPVVCVMEWILHNKHYSKEVKMAXXXXXXXXXXXX 60
             +SI  +N SL  NSVGFYQ++KL++IP   ++E +   K +S++++ +            
Sbjct:    84 ISIGLLNLSLGFNSVGFYQMTKLAIIPCTVLLETLFFRKKFSRKIQFSLTILLLGVGIAT 143

Query:    61 XXXXKVNAKGFLCACVAVLSTSLQQITIGSLQKKYSIGSFELLSKTAPIQAVSLLVLGPF 120
                 ++N  G + + +AV++T + QI   ++QKK+ + S +LL ++ P QA++L V GPF
Sbjct:   144 VTDLQLNMLGSVLSLLAVVTTCVAQIMTNTIQKKFKVSSTQLLYQSCPYQAITLFVTGPF 203

Query:   121 VDYYLNGKFITTYKMTSGAILFIFLSCALAVFCNVSQYLCIGRFSATSFQVLGHMKTVCV 180
             +D  L  + +  +K TS  + FI LSC ++V  N S +L IG+ S  ++QVLGH+KT  V
Sbjct:   204 LDGLLTNQNVFAFKYTSQVVFFIVLSCLISVSVNFSTFLVIGKTSPVTYQVLGHLKTCLV 263

Query:   181 LTLGWLLFDSALTFKNISGMILAVVGMVIYSWAVEAEKQRNA-KTS---PQSKNS 231
             L  G++L      ++NI G+++AV+GMV+YS+    E Q+ A +TS   PQ K S
Sbjct:   264 LAFGYVLLRDPFDWRNILGILVAVIGMVVYSYYCSIETQQKASETSTQLPQMKES 318

GO:0005886 "plasma membrane" evidence=ISM

GO:0016020 "membrane" evidence=ISS

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0006486 "protein glycosylation" evidence=RCA

GO:0006944 "cellular membrane fusion" evidence=RCA

GO:0048193 "Golgi vesicle transport" evidence=RCA

GO:0005768 "endosome" evidence=IDA

GO:0005802 "trans-Golgi network" evidence=IDA

TAIR|locus:504955965 AT2G28315 [Arabidopsis thaliana (taxid:3702)]

 Score = 387 (141.3 bits), Expect = 7.2e-36, P = 7.2e-36
 Identities = 81/225 (36%), Positives = 135/225 (60%)

Query:     1 MSIAGMNFSLMLNSVGFYQISKLSMIPVVCVMEWILHNKHYSKEVKMAXXXXXXXXXXXX 60
             +SI  +N SL  NS+GFYQ++KL++IP   ++E +  NK +S+++K +            
Sbjct:    84 ISIGLLNLSLGFNSIGFYQMTKLAIIPFTVLLETLFLNKKFSQKIKFSLFLLLVGVGIAS 143

Query:    61 XXXXKVNAKGFLCACVAVLSTSLQQITIGSLQKKYSIGSFELLSKTAPIQAVSLLVLGPF 120
                 ++N  G + + +A+ +T + QI   ++QK+ ++ S +LL ++AP QA  L V GPF
Sbjct:   144 ITDLQLNFVGSVLSLLAIATTCVGQILTNTIQKRLNVTSTQLLYQSAPFQAAILFVSGPF 203

Query:   121 VDYYLNGKFITTYKMTSGAILFIFLSCALAVFCNVSQYLCIGRFSATSFQVLGHMKTVCV 180
             VD YL    + ++  +   + FI LSC +AV  N S +L IG+ S  ++QVLGH+KT  V
Sbjct:   204 VDKYLTSLNVFSFHYSPIVVGFITLSCLIAVSVNFSTFLVIGKTSPVTYQVLGHLKTCLV 263

Query:   181 LTLGWLLFDSALTFKNISGMILAVVGMVIYSWAVE-AEKQRNAKT 224
             L  G+ L     T +NI+G+++AV+GM++YS+    A K + A +
Sbjct:   264 LAFGYTLLHDPFTPRNIAGILIAVLGMLLYSYFCSVASKSKQASS 308

GO:0005886 "plasma membrane" evidence=ISM

GO:0016020 "membrane" evidence=ISS

UNIPROTKB|A4IFK2 SLC35E3 "Solute carrier family 35 member E3" [Bos taurus (taxid:9913)]

 Score = 253 (94.1 bits), Expect = 1.1e-21, P = 1.1e-21
 Identities = 61/219 (27%), Positives = 109/219 (49%)

Query:     7 NFSLMLNSVGFYQISKLSMIPVVCVMEWILHNKHYSKEVKMAXXXXXXXXXXXXXXXXKV 66
             N SL  N++G YQ++K    PV+ V++ + + K +S ++++                 K 
Sbjct:    92 NLSLQNNTIGTYQLAKAMTTPVIIVIQTLCYKKTFSTKIRLTLIPITLGVILNSYYDVKF 151

Query:    67 NAKGFLCACVAVLSTSLQQITIGSLQKKYSIGSFELLSKTAPIQAVSLLVLGPFVD-YYL 125
             N  G + A + VL TSL Q+ +G+ Q +  + S +LL   AP+ +  LLV  PF +  + 
Sbjct:   152 NFLGTVFAALGVLVTSLYQVWVGAKQHELQVNSMQLLYYQAPMSSAMLLVAVPFFEPVFA 211

Query:   126 NGKFITTYKMTSGAILFIFLSCALAVFCNVSQYLCIGRFSATSFQVLGHMKTVCVLTLGW 185
              G     + ++  A+L + LS  +A   N+S Y  IG  S  ++ + GH K    L  G+
Sbjct:   212 EGGIFGPWSVS--ALLMVLLSGVIAFMVNLSIYWIIGNTSPVTYNMFGHFKFCITLFGGY 269

Query:   186 LLFDSALTFKNISGMILAVVGMVIYSWAVEAEKQRNAKT 224
             +LF   L+     GM+  + G++ Y+   +  +Q  +K+
Sbjct:   270 VLFKDPLSINQGLGMLCTLFGILAYTH-FKLSEQEGSKS 307

GO:0016021 "integral to membrane" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9SRE4	UGAL2_ARATH	No assigned EC number	0.8139	0.9961	0.7435	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	259
pfam03151	149	pfam03151, TPT, Triose-phosphate Transporter famil	7e-32
PTZ00343	350	PTZ00343, PTZ00343, triose or hexose phosphate/pho	7e-08
TIGR00817	302	TIGR00817, tpt, Tpt phosphate/phosphoenolpyruvate	8e-06
COG5070	309	COG5070, VRG4, Nucleotide-sugar transporter [Carbo	5e-04

>gnl|CDD|217390 pfam03151, TPT, Triose-phosphate Transporter family

 Score =  114 bits (287), Expect = 7e-32
 Identities = 45/149 (30%), Positives = 71/149 (47%), Gaps = 6/149 (4%)

Query: 70  GFLCACVAVLSTSLQQITIGSLQKK---YSIGSFELLSKTAPIQAVSLLVLGPFVDY--- 123
           GF+ A  A    +L+ I    L KK     +   ELL   +P+  + LL    F +    
Sbjct: 1   GFILALAASALFALRLILSQKLLKKKKGTKLNVLELLYYLSPVAFIVLLPGLLFSEGFKL 60

Query: 124 YLNGKFITTYKMTSGAILFIFLSCALAVFCNVSQYLCIGRFSATSFQVLGHMKTVCVLTL 183
                       TS  +L + LS  LA   N+S +  +GR S  +  V G +K V V+ L
Sbjct: 61  GKFILKFFGDLKTSRYVLLLLLSGVLAFLYNLSAFGLLGRTSPLTSSVAGTVKRVVVIVL 120

Query: 184 GWLLFDSALTFKNISGMILAVVGMVIYSW 212
             ++F   +TF NI G+ +A++G+V+YS+
Sbjct: 121 SVIIFGDPVTFLNILGLAIAILGVVLYSY 149

This family includes transporters with a specificity for triose phosphate. Length = 149

>gnl|CDD|240371 PTZ00343, PTZ00343, triose or hexose phosphate/phosphate translocator; Provisional

 Score = 52.0 bits (125), Expect = 7e-08
 Identities = 50/215 (23%), Positives = 94/215 (43%), Gaps = 13/215 (6%)

Query: 9   SLMLNSVGFYQISKLSMIPVVCVMEWILHNKHYSK-EVKMAVVVVVIGVGVCTITDVKVN 67
           S+ L +V F  + K +  PV   +  IL  K +      ++++ +V GV + ++ ++   
Sbjct: 134 SMGLGAVSFTHVVK-AAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASVKELHFT 192

Query: 68  AKGFLCACVAVLSTSLQQITIGSLQK-KYSIGS-------FELLSKTAPIQAV--SLLVL 117
              F CA ++ L +SL+ I      K K  IG        + LL+  A + ++   L   
Sbjct: 193 WLAFWCAMLSNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFE 252

Query: 118 GP-FVDYYLNGKFITTYKMTSGAILFIFLSCALAVFCNVSQYLCIGRFSATSFQVLGHMK 176
           G  +V  + N     T       I  IF S       N   + C+G+ +  +  V   +K
Sbjct: 253 GKKWVPVWTNYTANMTNYTKGIIIFKIFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLK 312

Query: 177 TVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYS 211
            V ++    ++F + +T     GM +A++G ++YS
Sbjct: 313 RVVIIVSSIIIFQTQVTLLGYLGMAVAILGALLYS 347

Length = 350

>gnl|CDD|129898 TIGR00817, tpt, Tpt phosphate/phosphoenolpyruvate translocator

 Score = 45.9 bits (109), Expect = 8e-06
 Identities = 47/215 (21%), Positives = 95/215 (44%), Gaps = 15/215 (6%)

Query: 7   NFSLMLNSVGFYQISKLSMIPV--VCVMEWILHNKHYSKEVKMAVVVVVIGVGVCTITDV 64
           N SL   +V F    K +M P   V +  + L  + +   + ++++ +V GV + + T++
Sbjct: 83  NVSLSKVAVSFTHTIK-AMEPFFSVVLSAFFLG-QEFPSTLWLSLLPIVGGVALASDTEL 140

Query: 65  KVNAKGFLCACVAVLSTSLQQITIGSLQKKYSIGSFELLSKTAPIQAVSLLVLGPFVDYY 124
             N  GFL A ++ ++   + I     +K  +I S +  +  A I  +SL +L P     
Sbjct: 141 SFNWAGFLSAMISNITFVSRNIFS---KKAMTIKSLDKTNLYAYISIMSLFLLSPPAFIT 197

Query: 125 LNGKFITTYKMTSGAIL--------FIFLSCALAVFCNVSQYLCIGRFSATSFQVLGHMK 176
               F+    M + + +         +  +     F     ++ +GR S  +  V   MK
Sbjct: 198 EGPPFLPHGFMQAISGVNVTKIYTVSLVAAMGFFHFYQQVAFMLLGRVSPLTHSVGNCMK 257

Query: 177 TVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYS 211
            V V+ +  L F + ++ + + G  +A+ G+ +YS
Sbjct: 258 RVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYS 292

The 6-8 TMS Triose-phosphate Transporter (TPT) Family (TC 2.A.7.9)Functionally characterized members of the TPT family are derived from the inner envelope membranes of chloroplasts and nongreen plastids of plants. However,homologues are also present in yeast. Saccharomyces cerevisiae has three functionally uncharacterized TPT paralogues encoded within its genome. Under normal physiologicalconditions, chloroplast TPTs mediate a strict antiport of substrates, frequently exchanging an organic three carbon compound phosphate ester for inorganic phosphate (Pi).Normally, a triose-phosphate, 3-phosphoglycerate, or another phosphorylated C3 compound made in the chloroplast during photosynthesis, exits the organelle into thecytoplasm of the plant cell in exchange for Pi. However, experiments with reconstituted translocator in artificial membranes indicate that transport can also occur by achannel-like uniport mechanism with up to 10-fold higher transport rates. Channel opening may be induced by a membrane potential of large magnitude and/or by high substrateconcentrations. Nongreen plastid and chloroplast carriers, such as those from maize endosperm and root membranes, mediate transport of C3 compounds phosphorylated atcarbon atom 2, particularly phosphenolpyruvate, in exchange for Pi. These are the phosphoenolpyruvate:Pi antiporters (PPT). Glucose-6-P has also been shown to be asubstrate of some plastid translocators (GPT). The three types of proteins (TPT, PPT and GPT) are divergent in sequence as well as substrate specificity, but their substratespecificities overlap [Hypothetical proteins, Conserved]. Length = 302

>gnl|CDD|227402 COG5070, VRG4, Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

 Score = 40.6 bits (95), Expect = 5e-04
 Identities = 41/219 (18%), Positives = 88/219 (40%), Gaps = 9/219 (4%)

Query: 9   SLMLNSVGFYQISKLSMIPVVCVMEWILHNKHYSKEVKMAVVVVVIGVGVCTITDVKVNA 68
           SL   +V  Y I K   I ++   E +      +    ++ +++V+   V T  D + +A
Sbjct: 88  SLQYLAVPIYTIFKNLTIILIAYGEVLFFGGRVTSLELLSFILMVLSSVVATWGDQQASA 147

Query: 69  K-------GFLCACVAVLSTSLQQITIGSLQKKYSIGSFELLSKTAPIQAVSLLVLGPFV 121
                   G+L      LS++   + +    K  +   F+ +     +    LL      
Sbjct: 148 FKAQILNPGYLWMFTNCLSSAAFVLIMRKRIKLTNFKDFDTMFYNNLLSLPILLSFSFLF 207

Query: 122 DYYLNGKFITTYKMTSGAILFIFLSCALAVFCNVSQYLCIGRFSATSFQVLGHMKTVCVL 181
           + +  G       + S   +FI  S   +V  +     C+   S+T++ ++G +  + + 
Sbjct: 208 EDWSPGNLANNLSVDSLMAMFI--SGLCSVGISYCSAWCVRVTSSTTYSMVGALNKLPIA 265

Query: 182 TLGWLLFDSALTFKNISGMILAVVGMVIYSWAVEAEKQR 220
             G + FD+ + F +I  ++L  +   IY+ A   ++Q 
Sbjct: 266 LAGLVFFDAPVNFLSIFSILLGFLSGAIYAVAKSKKQQN 304

Length = 309

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	259
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	99.96
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	99.96
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	99.96
PLN00411	358	nodulin MtN21 family protein; Provisional	99.93
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	99.93
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	99.92
PRK11689	295	aromatic amino acid exporter; Provisional	99.91
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	99.91
KOG1442	347	consensus GDP-fucose transporter [Carbohydrate tra	99.9
PRK15430	296	putative chloramphenical resistance permease RarD;	99.89
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	99.89
PRK11272	292	putative DMT superfamily transporter inner membran	99.87
KOG1443	349	consensus Predicted integral membrane protein [Fun	99.86
KOG1444	314	consensus Nucleotide-sugar transporter VRG4/SQV-7	99.85
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	99.84
PRK10532	293	threonine and homoserine efflux system; Provisiona	99.83
KOG1580	337	consensus UDP-galactose transporter related protei	99.8
COG0697	292	RhaT Permeases of the drug/metabolite transporter	99.77
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	99.75
KOG1581	327	consensus UDP-galactose transporter related protei	99.75
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	99.73
KOG2765	416	consensus Predicted membrane protein [Function unk	99.72
COG5070	309	VRG4 Nucleotide-sugar transporter [Carbohydrate tr	99.72
KOG1583	330	consensus UDP-N-acetylglucosamine transporter [Car	99.71
KOG3912	372	consensus Predicted integral membrane protein [Gen	99.7
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	99.69
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	99.68
COG2962	293	RarD Predicted permeases [General function predict	99.67
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	99.67
KOG4510	346	consensus Permease of the drug/metabolite transpor	99.65
KOG1582	367	consensus UDP-galactose transporter related protei	99.59
KOG2766	336	consensus Predicted membrane protein [Function unk	99.58
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	99.44
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	99.39
COG2510	140	Predicted membrane protein [Function unknown]	99.34
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	99.22
KOG4314	290	consensus Predicted carbohydrate/phosphate translo	99.04
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	98.98
PRK15430	296	putative chloramphenical resistance permease RarD;	98.91
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	98.84
PLN00411	358	nodulin MtN21 family protein; Provisional	98.73
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	98.63
PF13536	113	EmrE: Multidrug resistance efflux transporter	98.42
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	98.4
COG2962	293	RarD Predicted permeases [General function predict	98.35
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.35
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	98.34
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	98.32
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	98.3
PRK11689	295	aromatic amino acid exporter; Provisional	98.3
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	98.25
PRK11272	292	putative DMT superfamily transporter inner membran	98.22
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	98.12
PF13536	113	EmrE: Multidrug resistance efflux transporter	98.01
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	97.98
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	97.96
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	97.95
COG0697	292	RhaT Permeases of the drug/metabolite transporter	97.89
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	97.89
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	97.83
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	97.69
PRK13499	345	rhamnose-proton symporter; Provisional	97.51
PRK13499	345	rhamnose-proton symporter; Provisional	97.46
COG2510	140	Predicted membrane protein [Function unknown]	97.42
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	97.41
PRK10532	293	threonine and homoserine efflux system; Provisiona	97.41
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	97.31
KOG2922	335	consensus Uncharacterized conserved protein [Funct	97.27
KOG4510	346	consensus Permease of the drug/metabolite transpor	97.25
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	97.25
PF07857	254	DUF1632: CEO family (DUF1632); InterPro: IPR012435	97.23
COG3238	150	Uncharacterized protein conserved in bacteria [Fun	96.91
PRK09541	110	emrE multidrug efflux protein; Reviewed	96.89
COG2076	106	EmrE Membrane transporters of cations and cationic	96.87
PRK11431	105	multidrug efflux system protein; Provisional	96.86
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	96.76
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	96.68
PRK10650	109	multidrug efflux system protein MdtI; Provisional	96.59
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	96.55
PRK09541	110	emrE multidrug efflux protein; Reviewed	96.37
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	96.34
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	96.2
PRK11431	105	multidrug efflux system protein; Provisional	96.12
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	96.03
PRK10650	109	multidrug efflux system protein MdtI; Provisional	96.01
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	95.89
COG2076	106	EmrE Membrane transporters of cations and cationic	95.48
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	95.36
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	95.23
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	95.05
KOG2765	416	consensus Predicted membrane protein [Function unk	94.57
KOG1580	337	consensus UDP-galactose transporter related protei	94.49
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	93.86
PF07168	336	Ureide_permease: Ureide permease; InterPro: IPR009	92.75
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	92.72
KOG4314	290	consensus Predicted carbohydrate/phosphate translo	88.92
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	88.54
PF06379	344	RhaT: L-rhamnose-proton symport protein (RhaT); In	88.31
KOG1581	327	consensus UDP-galactose transporter related protei	87.58
KOG2922	335	consensus Uncharacterized conserved protein [Funct	85.07
KOG1444	314	consensus Nucleotide-sugar transporter VRG4/SQV-7	84.43
KOG1442	347	consensus GDP-fucose transporter [Carbohydrate tra	81.45

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=99.96  E-value=4e-30  Score=219.72  Aligned_cols=213  Identities=17%  Similarity=0.186  Sum_probs=173.6

Q ss_pred             eeeeeeeecccchhHHHHHhhhhHHHHHHHHHHHhccccChhhhhhhhheeecceeeeecccccchHHHHHHHHHHHHHH
Q 025040            3 IAGMNFSLMLNSVGFYQISKLSMIPVVCVMEWILHNKHYSKEVKMAVVVVVIGVGVCTITDVKVNAKGFLCACVAVLSTS   82 (259)
Q Consensus         3 ~~~~n~al~~~~~~~~~~l~~~~p~~~~l~~~l~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~G~~~~l~a~l~~a   82 (259)
                      ..++|.|++|++++++++++++.|+++++++++++|||++++++.+++++++|+++....+.+++..|++++++++++|+
T Consensus        79 ~~~~~~~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~~~~~~~~~~G~~~~l~a~~~~a  158 (302)
T TIGR00817        79 HVTSNVSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALASDTELSFNWAGFLSAMISNITFV  158 (302)
T ss_pred             HHHHHHHHHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhcCCcccccHHHHHHHHHHHHHHH
Confidence            45789999999999999999999999999999999999999999999999999998776777778889999999999999


Q ss_pred             HHHHHHHHHHhhcCCCHHHHHHhhhhHHHHHHHHHHHhhhhhc-cCcccccc--cCch-hHHHHHHHHHH-HHHHHHHHH
Q 025040           83 LQQITIGSLQKKYSIGSFELLSKTAPIQAVSLLVLGPFVDYYL-NGKFITTY--KMTS-GAILFIFLSCA-LAVFCNVSQ  157 (259)
Q Consensus        83 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~-~~~~~~~~~~~-~~~~~~~~~  157 (259)
                      +|.++.||..++.+.|+.+...|++..+.+.+++.....+... ........  .+.. ..+...+..+. +....+...
T Consensus       159 ~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (302)
T TIGR00817       159 SRNIFSKKAMTIKSLDKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTVSLVAAMGFFHFYQQVA  238 (302)
T ss_pred             HHHHHHHHhhccCCCCcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999987755689999999999888888887765544211 00000010  0111 12222333333 344455667


Q ss_pred             HHHhcccCceeeehhhhhhhHHHHhhhhhhcCCcccccchhhHHHHHHHHHHHHHHhh
Q 025040          158 YLCIGRFSATSFQVLGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYSWAVE  215 (259)
Q Consensus       158 ~~~l~~~~~~~~si~~~~~pv~~~~~s~~~~~e~~s~~~~~G~~lii~g~~~~~~~~~  215 (259)
                      +.+++++||+++++.++++|++++++|++++||+++..+++|.++++.|+.+|++.|.
T Consensus       239 ~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~~~k~  296 (302)
T TIGR00817       239 FMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSRVKA  296 (302)
T ss_pred             HHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHHHHhc
Confidence            7899999999999999999999999999999999999999999999999999986543

specificities overlap.

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=99.96  E-value=5.2e-28  Score=210.07  Aligned_cols=209  Identities=19%  Similarity=0.303  Sum_probs=177.6

Q ss_pred             eeeeeecccchhHHHHHhhhhHHHHHHHHHHHhccccChhhhhhhhheeecceeeeecccccchHHHHHHHHHHHHHHHH
Q 025040            5 GMNFSLMLNSVGFYQISKLSMIPVVCVMEWILHNKHYSKEVKMAVVVVVIGVGVCTITDVKVNAKGFLCACVAVLSTSLQ   84 (259)
Q Consensus         5 ~~n~al~~~~~~~~~~l~~~~p~~~~l~~~l~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~G~~~~l~a~l~~a~~   84 (259)
                      ..|.|+++++++++++++++.|+++++++++++|||++++++.+++++++|+.+...+|.++++.|++++++|+++++++
T Consensus       130 ~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~~~~~~~~~G~~~~l~s~~~~a~~  209 (350)
T PTZ00343        130 GAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASVKELHFTWLAFWCAMLSNLGSSLR  209 (350)
T ss_pred             HHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheecccchhHHHHHHHHHHHHHHHHHH
Confidence            35789999999999999999999999999999999999999999999999999999888888999999999999999999


Q ss_pred             HHHHHHHHhhc-----CCCHHHHHHhhhhHHHHHHHHHHHhhhhhccCccc----ccc-cCc-hhHHHHHHHHHHHHHHH
Q 025040           85 QITIGSLQKKY-----SIGSFELLSKTAPIQAVSLLVLGPFVDYYLNGKFI----TTY-KMT-SGAILFIFLSCALAVFC  153 (259)
Q Consensus        85 ~v~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~-~~~-~~~~~~~~~~~~~~~~~  153 (259)
                      +++.|+..+++     +.++.+...+....+.+.+++..++.|........    ... .+. ...+..++.+++..+..
T Consensus       210 ~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~~~~~~~~~~~~~~~~~~l~~i~~s~l~~~l~  289 (350)
T PTZ00343        210 SIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKWVPVWTNYTANMTNYTKGIIIFKIFFSGVWYYLY  289 (350)
T ss_pred             HHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhcccccchHHHHHHHHHHHHHHHHH
Confidence            99999988654     35677777777888888888877655432100000    000 111 23444666778888888


Q ss_pred             HHHHHHHhcccCceeeehhhhhhhHHHHhhhhhhcCCcccccchhhHHHHHHHHHHHHHH
Q 025040          154 NVSQYLCIGRFSATSFQVLGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYSWA  213 (259)
Q Consensus       154 ~~~~~~~l~~~~~~~~si~~~~~pv~~~~~s~~~~~e~~s~~~~~G~~lii~g~~~~~~~  213 (259)
                      |.+.|.++++++|.++++.++++|++++++|++++||++|..+++|.++++.|+.+|++.
T Consensus       290 n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~lYs~~  349 (350)
T PTZ00343        290 NEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALLYSLF  349 (350)
T ss_pred             HHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHHHhhc
Confidence            988999999999999999999999999999999999999999999999999999999875

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=99.96  E-value=2.2e-28  Score=205.55  Aligned_cols=215  Identities=33%  Similarity=0.476  Sum_probs=188.6

Q ss_pred             ceeeeeeeecccchhHHHHHhhhhHHHHHHHHHHHhccccChhhhhhhhheeecceeeeecccccchHHHHHHHHHHHHH
Q 025040            2 SIAGMNFSLMLNSVGFYQISKLSMIPVVCVMEWILHNKHYSKEVKMAVVVVVIGVGVCTITDVKVNAKGFLCACVAVLST   81 (259)
Q Consensus         2 ~~~~~n~al~~~~~~~~~~l~~~~p~~~~l~~~l~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~G~~~~l~a~l~~   81 (259)
                      +..++|.|++++++++++++|++.|++++++++++.+|+.++..+.+++..+.|+.+.+..|.++|+.|+..++++.+..
T Consensus        96 ~~v~~n~Sl~~v~VsF~q~iKa~~P~~tvl~~~~~~~~~~s~~~~lsL~piv~GV~ias~~e~~fn~~G~i~a~~s~~~~  175 (316)
T KOG1441|consen   96 SHVLGNVSLSYVPVSFYQTIKALMPPFTVLLSVLLLGKTYSSMTYLSLLPIVFGVAIASVTELSFNLFGFISAMISNLAF  175 (316)
T ss_pred             HHHhcchhhhccchhHHHHHHhhcchhHHHHHHHHhCCCCcceEEEEEEEeeeeEEEeeeccccccHHHHHHHHHHHHHH
Confidence            56789999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHH--hhcCCCHHHHHHhhhhHHHHHHH-HHHHhhhhhccCcccccccCchhHHHHHHHHHHHHHHHHHHHH
Q 025040           82 SLQQITIGSLQ--KKYSIGSFELLSKTAPIQAVSLL-VLGPFVDYYLNGKFITTYKMTSGAILFIFLSCALAVFCNVSQY  158 (259)
Q Consensus        82 a~~~v~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (259)
                      ++++++.+++.  |+++.++.+++.++++.+.+.++ +.....|+... .......|+...+.. ++..++++..|...|
T Consensus       176 al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~sv~~f~~Nls~f  253 (316)
T KOG1441|consen  176 ALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKF-VGFLTAPWFVTFLIL-LLNSVLAFLLNLSAF  253 (316)
T ss_pred             HHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccce-eeeeccccchhhHHH-HHHHHHHHHHHHHHH
Confidence            99999999999  46789999999999999888888 44433333211 111223454444434 444499999999999


Q ss_pred             HHhcccCceeeehhhhhhhHHHHhhhhhhcCCcccccchhhHHHHHHHHHHHHHHhhHHH
Q 025040          159 LCIGRFSATSFQVLGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYSWAVEAEK  218 (259)
Q Consensus       159 ~~l~~~~~~~~si~~~~~pv~~~~~s~~~~~e~~s~~~~~G~~lii~g~~~~~~~~~~~~  218 (259)
                      ++++++||++.++.+.+|.++.++.|+++|+++.++.+..|+++.++|+.+|++.+.+++
T Consensus       254 ~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~~~k~~~~  313 (316)
T KOG1441|consen  254 LVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYSRAKLKEK  313 (316)
T ss_pred             HHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHHHHhhhhh
Confidence            999999999999999999999999999999999999999999999999999998876543

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=99.93  E-value=3e-25  Score=192.33  Aligned_cols=207  Identities=11%  Similarity=0.122  Sum_probs=157.8

Q ss_pred             eeeeeecccchhHHHHHhhhhHHHHHHHHHHH------hccccChhhhhhhhheeecceeeeec-cc-------------
Q 025040            5 GMNFSLMLNSVGFYQISKLSMIPVVCVMEWIL------HNKHYSKEVKMAVVVVVIGVGVCTIT-DV-------------   64 (259)
Q Consensus         5 ~~n~al~~~~~~~~~~l~~~~p~~~~l~~~l~------~~~~~~~~~~~~~~l~~~Gv~l~~~~-~~-------------   64 (259)
                      +.+.|++|++++.++++.++.|++++++++++      +|||+++++++|++++++|+.++... +.             
T Consensus        94 ~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~~g~~~~~~~~~~~~~~  173 (358)
T PLN00411         94 TGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIFYHGPRVFVASSPPYLNF  173 (358)
T ss_pred             HHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHHccCcccccccccccccc
Confidence            46789999999999999999999999999999      69999999999999999999886531 10             


Q ss_pred             ----------ccc-hHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHhhhhHHHHHHHHHHHhhhhhccCcccccc
Q 025040           65 ----------KVN-AKGFLCACVAVLSTSLQQITIGSLQKKYSIGSFELLSKTAPIQAVSLLVLGPFVDYYLNGKFITTY  133 (259)
Q Consensus        65 ----------~~~-~~G~~~~l~a~l~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  133 (259)
                                ..+ ..|+.++++++++||+|++++|+..+++ .++.....+++.++.+.+.......+..... .+ ..
T Consensus       174 ~~~~~~~~~~~~~~~lG~~l~l~aa~~wa~~~il~~~~~~~~-~~~~~~t~~~~~~~~~~~~~~~l~~~~~~~~-~~-~~  250 (358)
T PLN00411        174 RQLSPPLSSSNSDWLIGGALLTIQGIFVSVSFILQAHIMSEY-PAAFTVSFLYTVCVSIVTSMIGLVVEKNNPS-VW-II  250 (358)
T ss_pred             cccccccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CcHhHHHHHHHHHHHHHHHHHHHHHccCCcc-cc-ee
Confidence                      112 4599999999999999999999987754 2334556666655555555444433321000 00 11


Q ss_pred             cCchhHHHHHHHHHHHHHHHHHHHHHHhcccCceeeehhhhhhhHHHHhhhhhhcCCcccccchhhHHHHHHHHHHHHHH
Q 025040          134 KMTSGAILFIFLSCALAVFCNVSQYLCIGRFSATSFQVLGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYSWA  213 (259)
Q Consensus       134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~si~~~~~pv~~~~~s~~~~~e~~s~~~~~G~~lii~g~~~~~~~  213 (259)
                      .++...+ .+++.+++..+....+++++++.+|..+++..+++|+++.++|++++||++++.+++|+++++.|+++.++.
T Consensus       251 ~~~~~~~-~i~y~~i~t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~Gv~l~~~~  329 (358)
T PLN00411        251 HFDITLI-TIVTMAIITSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITLGFYAVMWG  329 (358)
T ss_pred             ccchHHH-HHHHHHHHHHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhh
Confidence            2333322 244444444455556778999999999999999999999999999999999999999999999999998764


Q ss_pred             hh
Q 025040          214 VE  215 (259)
Q Consensus       214 ~~  215 (259)
                      ++
T Consensus       330 ~~  331 (358)
T PLN00411        330 KA  331 (358)
T ss_pred             hh
Confidence            43

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=99.93  E-value=3.7e-25  Score=188.29  Aligned_cols=206  Identities=18%  Similarity=0.200  Sum_probs=173.8

Q ss_pred             eeeeeecccchhHHHHHhhhhHHHHHHHHHHHhccccChhhhhhhhheeecceeeeeccc---------ccchHHHHHHH
Q 025040            5 GMNFSLMLNSVGFYQISKLSMIPVVCVMEWILHNKHYSKEVKMAVVVVVIGVGVCTITDV---------KVNAKGFLCAC   75 (259)
Q Consensus         5 ~~n~al~~~~~~~~~~l~~~~p~~~~l~~~l~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~---------~~~~~G~~~~l   75 (259)
                      +.+.|++|++++.++++.++..+|+++++++++|+|+++.|++|++++++|+.++...|.         +....|+++++
T Consensus        95 ~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD~~~~~~~~~~~~~i~GDll~l  174 (334)
T PF06027_consen   95 LVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSDVLSGSDSSSGSNPILGDLLAL  174 (334)
T ss_pred             HHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeecccccccCCCCCccchhHHHHH
Confidence            457899999999999999999999999999999999999999999999999998876652         23468999999


Q ss_pred             HHHHHHHHHHHHHHHHHhhcCCCHHHHHHhhhhHHHHHHHHHHHhhhhhccCcccccccCchhHHHHHHHHHHHHHHHHH
Q 025040           76 VAVLSTSLQQITIGSLQKKYSIGSFELLSKTAPIQAVSLLVLGPFVDYYLNGKFITTYKMTSGAILFIFLSCALAVFCNV  155 (259)
Q Consensus        76 ~a~l~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (259)
                      +++.+||++++++|+..++  .+..+...+...++.+...+....+|.    ...+...|+...+.+.+..+++-+....
T Consensus       175 ~~a~lya~~nV~~E~~v~~--~~~~~~lg~~Glfg~ii~~iq~~ile~----~~i~~~~w~~~~~~~~v~~~~~lf~~y~  248 (334)
T PF06027_consen  175 LGAILYAVSNVLEEKLVKK--APRVEFLGMLGLFGFIISGIQLAILER----SGIESIHWTSQVIGLLVGYALCLFLFYS  248 (334)
T ss_pred             HHHHHHHHHHHHHHHhccc--CCHHHHHHHHHHHHHHHHHHHHHheeh----hhhhccCCChhhHHHHHHHHHHHHHHHH
Confidence            9999999999999998885  477888999988888877776665553    2344456666665565555555555555


Q ss_pred             HHHHHhcccCceeeehhhhhhhHHHHhhhhhhcCCcccccchhhHHHHHHHHHHHHHHhhH
Q 025040          156 SQYLCIGRFSATSFQVLGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYSWAVEA  216 (259)
Q Consensus       156 ~~~~~l~~~~~~~~si~~~~~pv~~~~~s~~~~~e~~s~~~~~G~~lii~g~~~~~~~~~~  216 (259)
                      ..-..++..+|+..++...+..+.+.+++++++|+++++..++|.+++++|+++|+..+++
T Consensus       249 l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~~~~  309 (334)
T PF06027_consen  249 LVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLAESP  309 (334)
T ss_pred             HHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEccCCc
Confidence            5556789999999999999999999999999999999999999999999999999876543

Some of the sequences in this family are annotated as putative membrane proteins.

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=99.92  E-value=7.4e-25  Score=187.15  Aligned_cols=213  Identities=21%  Similarity=0.298  Sum_probs=183.4

Q ss_pred             ceeeeeeeecccchhHHHHHhhhhHHHHHHHHHHHhccccChhhhhhhhheeecceeeeecccc----c------chHHH
Q 025040            2 SIAGMNFSLMLNSVGFYQISKLSMIPVVCVMEWILHNKHYSKEVKMAVVVVVIGVGVCTITDVK----V------NAKGF   71 (259)
Q Consensus         2 ~~~~~n~al~~~~~~~~~~l~~~~p~~~~l~~~l~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~~----~------~~~G~   71 (259)
                      +..++|.|++|+|.+++++.|++.|+++++++++++|||++++++.++++..+|+++....|..    .      +..|+
T Consensus        77 ~~~~~~~al~~i~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~~~~~~~~~~~~G~  156 (303)
T PF08449_consen   77 ASVLSNAALKYISYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSSSSNSSSFSSALGI  156 (303)
T ss_pred             HHHHHHHHHHhCChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeecccccccccccccccchhHH
Confidence            3467899999999999999999999999999999999999999999999999999998765531    1      12399


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHhhhhHHHHHHHHHHHhh--hhhccCcccccccCchhHHHHHHHHHHH
Q 025040           72 LCACVAVLSTSLQQITIGSLQKKYSIGSFELLSKTAPIQAVSLLVLGPFV--DYYLNGKFITTYKMTSGAILFIFLSCAL  149 (259)
Q Consensus        72 ~~~l~a~l~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (259)
                      ++.+++.++.+++.+++|++.++++.++.+.+++.+.++.+..++.....  +...+.  ..-...++..+..++..+++
T Consensus       157 ~ll~~sl~~~a~~~~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~--~~f~~~~p~~~~~l~~~s~~  234 (303)
T PF08449_consen  157 ILLLLSLLLDAFTGVYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSA--IRFISAHPSVLLYLLLFSLT  234 (303)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHH--HHHHHHhHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999888887776652  221111  11112344566788888888


Q ss_pred             HHHHHHHHHHHhcccCceeeehhhhhhhHHHHhhhhhhcCCcccccchhhHHHHHHHHHHHHHHhhH
Q 025040          150 AVFCNVSQYLCIGRFSATSFQVLGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYSWAVEA  216 (259)
Q Consensus       150 ~~~~~~~~~~~l~~~~~~~~si~~~~~pv~~~~~s~~~~~e~~s~~~~~G~~lii~g~~~~~~~~~~  216 (259)
                      ++..+...+.++++.+|++.+++..++.+.++++|+++|++++++.||+|.++++.|..+|.+.+++
T Consensus       235 ~~~g~~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~~~~k  301 (303)
T PF08449_consen  235 GALGQFFIFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSYAKKK  301 (303)
T ss_pred             HHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHHhhcc
Confidence            8888888888999999999999999999999999999999999999999999999999999887654

; GO: 0055085 transmembrane transport

>PRK11689 aromatic amino acid exporter; Provisional

Probab=99.91  E-value=4e-23  Score=175.91  Aligned_cols=192  Identities=13%  Similarity=0.070  Sum_probs=148.0

Q ss_pred             cccchhHHHHHhhhhHHHHHHHHHHHhccccChhhhhhhhheeecceeeeecccc-----------cchHHHHHHHHHHH
Q 025040           11 MLNSVGFYQISKLSMIPVVCVMEWILHNKHYSKEVKMAVVVVVIGVGVCTITDVK-----------VNAKGFLCACVAVL   79 (259)
Q Consensus        11 ~~~~~~~~~~l~~~~p~~~~l~~~l~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~~-----------~~~~G~~~~l~a~l   79 (259)
                      ++.+++.+.++.++.|+++.+++++++|||++++++.+++++++|++++..++.+           .+..|+++++++++
T Consensus        87 ~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~G~~~~l~aa~  166 (295)
T PRK11689         87 TRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAWVLGGDNGLSLAELINNIASNPLSYGLAFIGAF  166 (295)
T ss_pred             ccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhheecCCccchhhhhhhccccChHHHHHHHHHHH
Confidence            3567788899999999999999999999999999999999999999998755421           23569999999999


Q ss_pred             HHHHHHHHHHHHHhhcCCCHHHHHHhhhhHHHHHHHHHHHhhhhhccCcccccccCchhHHHHHHHHHHHHHHHHHHHHH
Q 025040           80 STSLQQITIGSLQKKYSIGSFELLSKTAPIQAVSLLVLGPFVDYYLNGKFITTYKMTSGAILFIFLSCALAVFCNVSQYL  159 (259)
Q Consensus        80 ~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (259)
                      |||+|+++.||..++  .++......   .+...+.+...+ +.    ..  ...++...+..+++.++.+.+.+..+++
T Consensus       167 ~~A~~~v~~k~~~~~--~~~~~~~~~---~~~~~l~~~~~~-~~----~~--~~~~~~~~~~~l~~~~~~t~~~~~l~~~  234 (295)
T PRK11689        167 IWAAYCNVTRKYARG--KNGITLFFI---LTALALWIKYFL-SP----QP--AMVFSLPAIIKLLLAAAAMGFGYAAWNV  234 (295)
T ss_pred             HHHHHHHHHhhccCC--CCchhHHHH---HHHHHHHHHHHH-hc----Cc--cccCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999997653  455543221   122222221111 11    11  1123344455555666666666777788


Q ss_pred             HhcccCceeeehhhhhhhHHHHhhhhhhcCCcccccchhhHHHHHHHHHHHHHHh
Q 025040          160 CIGRFSATSFQVLGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYSWAV  214 (259)
Q Consensus       160 ~l~~~~~~~~si~~~~~pv~~~~~s~~~~~e~~s~~~~~G~~lii~g~~~~~~~~  214 (259)
                      ++++.+|.+++...+++|+++++++++++||+++..+++|+++++.|+++.....
T Consensus       235 al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~~~  289 (295)
T PRK11689        235 GILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWLAT  289 (295)
T ss_pred             HHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhhhH
Confidence            9999999999999999999999999999999999999999999999998876543

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=99.91  E-value=2.7e-23  Score=177.29  Aligned_cols=208  Identities=16%  Similarity=0.149  Sum_probs=154.9

Q ss_pred             eeeecc-cchhHHHHHhhhhHHHHHHHHHHHhccccChhhhhhhhheeecceeeeecc---cccchHHHHHHHHHHHHHH
Q 025040            7 NFSLML-NSVGFYQISKLSMIPVVCVMEWILHNKHYSKEVKMAVVVVVIGVGVCTITD---VKVNAKGFLCACVAVLSTS   82 (259)
Q Consensus         7 n~al~~-~~~~~~~~l~~~~p~~~~l~~~l~~~~~~~~~~~~~~~l~~~Gv~l~~~~~---~~~~~~G~~~~l~a~l~~a   82 (259)
                      +.+++| .+++.+.++.++.|+++.+++++++|||++++++++++++++|+.++..++   .+.++.|+.++++++++|+
T Consensus        77 ~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~~~~~~~~~~~~~G~~l~l~aal~~a  156 (299)
T PRK11453         77 FCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLIEDSLNGQHVAMLGFMLTLAAAFSWA  156 (299)
T ss_pred             HHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhccccCCCcchhHHHHHHHHHHHHHHH
Confidence            456677 688999999999999999999999999999999999999999999876542   2335679999999999999


Q ss_pred             HHHHHHHHHHhhcC-CCHHHHHHhhhhHHHHHHHHHHHhhhhhccCcccccccCchhHHHHHHHHHHHHHHH-HHHHHHH
Q 025040           83 LQQITIGSLQKKYS-IGSFELLSKTAPIQAVSLLVLGPFVDYYLNGKFITTYKMTSGAILFIFLSCALAVFC-NVSQYLC  160 (259)
Q Consensus        83 ~~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~  160 (259)
                      .+.++.|+..++.+ .+......+.+..+.+.+.......+..... ......++...+..+++.++++... ...+++.
T Consensus       157 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~l~i~~t~~~~~l~~~~  235 (299)
T PRK11453        157 CGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATM-IHSLVTIDMTTILSLMYLAFVATIVGYGIWGTL  235 (299)
T ss_pred             HHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhh-hhhhccCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999765332 2233444455444433333332222221100 0001123445566666666665554 4445578


Q ss_pred             hcccCceeeehhhhhhhHHHHhhhhhhcCCcccccchhhHHHHHHHHHHHHHHhh
Q 025040          161 IGRFSATSFQVLGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYSWAVE  215 (259)
Q Consensus       161 l~~~~~~~~si~~~~~pv~~~~~s~~~~~e~~s~~~~~G~~lii~g~~~~~~~~~  215 (259)
                      +++.++.+++.+.+++|+++.++|++++||+++..+++|.++++.|+++..+.++
T Consensus       236 l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~~~~  290 (299)
T PRK11453        236 LGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVFGLR  290 (299)
T ss_pred             HHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhcchh
Confidence            9999999999999999999999999999999999999999999999988765443

>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.90  E-value=1.6e-24  Score=173.84  Aligned_cols=220  Identities=14%  Similarity=0.113  Sum_probs=192.6

Q ss_pred             ceeeeeeeecccchhHHHHHhhhhHHHHHHHHHHHhccccChhhhhhhhheeecceeeeecc---cccchHHHHHHHHHH
Q 025040            2 SIAGMNFSLMLNSVGFYQISKLSMIPVVCVMEWILHNKHYSKEVKMAVVVVVIGVGVCTITD---VKVNAKGFLCACVAV   78 (259)
Q Consensus         2 ~~~~~n~al~~~~~~~~~~l~~~~p~~~~l~~~l~~~~~~~~~~~~~~~l~~~Gv~l~~~~~---~~~~~~G~~~~l~a~   78 (259)
                      .+.++|++++|+++++|++-+++..+|++++.++++|||.+..-..+..+.+.|-.+-+..+   ...++.|.++++.|+
T Consensus       115 mI~fnnlcL~yVgVaFYyvgRsLttvFtVlLtyvllkqkTs~~~~~~C~lIi~GF~lGvdqE~~~~~ls~~GvifGVlaS  194 (347)
T KOG1442|consen  115 MISFNNLCLKYVGVAFYYVGRSLTTVFTVLLTYVLLKQKTSFFALGCCLLIILGFGLGVDQEGSTGTLSWIGVIFGVLAS  194 (347)
T ss_pred             ehhccceehhhcceEEEEeccchhhhHHHHhHHhhcccccccccceeehhheehheeccccccccCccchhhhHHHHHHH
Confidence            46789999999999999999999999999999999999999999999999999998877766   457899999999999


Q ss_pred             HHHHHHHHHHHHHHhhcCCCHHHHHHhhhhHHHHHHHHHHHhhhhhccCcccccccCchhHHHHHHHHHHHHHHHHHHHH
Q 025040           79 LSTSLQQITIGSLQKKYSIGSFELLSKTAPIQAVSLLVLGPFVDYYLNGKFITTYKMTSGAILFIFLSCALAVFCNVSQY  158 (259)
Q Consensus        79 l~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (259)
                      ++.|+..++.|+.....+-.-+++.+|++..+.+..++...+... ++.....+..+..++|..+.++|++++..++...
T Consensus       195 l~vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge-~~~v~~~~~l~a~~Fw~~mtLsglfgF~mgyvTg  273 (347)
T KOG1442|consen  195 LAVALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGE-FQAVVGFPHLPAIKFWILMTLSGLFGFAMGYVTG  273 (347)
T ss_pred             HHHHHHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcch-HHHHcCcccchHHHHHHHHHHHHHHHHHhhheee
Confidence            999999999998665555667999999998888887777655422 1112222345667899999999999999999999


Q ss_pred             HHhcccCceeeehhhhhhhHHHHhhhhhhcCCcccccchhhHHHHHHHHHHHHHHhhHHHhhcc
Q 025040          159 LCIGRFSATSFQVLGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYSWAVEAEKQRNA  222 (259)
Q Consensus       159 ~~l~~~~~~~~si~~~~~pv~~~~~s~~~~~e~~s~~~~~G~~lii~g~~~~~~~~~~~~~~~~  222 (259)
                      +-+|-+||+++++.+..+....+++++.+++|..+...|.|-++++.|...|++.++++++++.
T Consensus       274 ~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~~YT~vk~~em~~~~  337 (347)
T KOG1442|consen  274 WQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVGSLAYTLVKEHEMRKAS  337 (347)
T ss_pred             EEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEehhHHHHHHHHHHHHhhc
Confidence            9999999999999999999999999999999999999999999999999999999887765443

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=99.89  E-value=1e-22  Score=173.46  Aligned_cols=199  Identities=11%  Similarity=0.068  Sum_probs=147.5

Q ss_pred             eeeeeeecccchhHHHHHhhhhHHHHHHHHHHHhccccChhhhhhhhheeecceeeeecccccchHHHHHHHHHHHHHHH
Q 025040            4 AGMNFSLMLNSVGFYQISKLSMIPVVCVMEWILHNKHYSKEVKMAVVVVVIGVGVCTITDVKVNAKGFLCACVAVLSTSL   83 (259)
Q Consensus         4 ~~~n~al~~~~~~~~~~l~~~~p~~~~l~~~l~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~G~~~~l~a~l~~a~   83 (259)
                      .+.+.|+++++++.++++.++.|+++++++++++|||+++++|.+++++++|++++..++.+.    ..++++++++||+
T Consensus        88 ~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~~~~~~~----~~~~l~aa~~~a~  163 (296)
T PRK15430         88 LLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQLWTFGSL----PIIALGLAFSFAF  163 (296)
T ss_pred             HHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHcCCc----cHHHHHHHHHHHH
Confidence            456789999999999999999999999999999999999999999999999999876433322    1468889999999


Q ss_pred             HHHHHHHHHhhcCCCHHHHHHhhhhHHHHHHHHHHHhhhhhccCcccccccCch-hHHHHHHHHHHHHHHHHHHHHHHhc
Q 025040           84 QQITIGSLQKKYSIGSFELLSKTAPIQAVSLLVLGPFVDYYLNGKFITTYKMTS-GAILFIFLSCALAVFCNVSQYLCIG  162 (259)
Q Consensus        84 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~  162 (259)
                      |.++.|+..++...+......+....+.....   +..+.     .......+. ..+..++..++.+.+.+.+++++++
T Consensus       164 ~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-----~~~~~~~~~~~~~~~~~~~g~~t~i~~~~~~~a~~  235 (296)
T PRK15430        164 YGLVRKKIAVEAQTGMLIETMWLLPVAAIYLF---AIADS-----STSHMGQNPMSLNLLLIAAGIVTTVPLLCFTAAAT  235 (296)
T ss_pred             HHHHHHhcCCCCchhHHHHHHHHHHHHHHHHH---HHccC-----CcccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            99999886432222333333343333322211   11111     000011111 1223444445556666777888999


Q ss_pred             ccCceeeehhhhhhhHHHHhhhhhhcCCcccccchhhHHHHHHHHHHHHHHh
Q 025040          163 RFSATSFQVLGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYSWAV  214 (259)
Q Consensus       163 ~~~~~~~si~~~~~pv~~~~~s~~~~~e~~s~~~~~G~~lii~g~~~~~~~~  214 (259)
                      +.+|..++...+++|+++.++|++++||+++..+++|+++++.|+.+.....
T Consensus       236 ~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~v~~~~~  287 (296)
T PRK15430        236 RLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFVMDA  287 (296)
T ss_pred             cCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999988876554

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=99.89  E-value=2.5e-22  Score=167.97  Aligned_cols=195  Identities=15%  Similarity=0.102  Sum_probs=155.1

Q ss_pred             eeeeeecccchhHHHHHhhhhHHHHHHHHHHHhccccChhhhhhhhheeecceeeeecc-cccchHHHHHHHHHHHHHHH
Q 025040            5 GMNFSLMLNSVGFYQISKLSMIPVVCVMEWILHNKHYSKEVKMAVVVVVIGVGVCTITD-VKVNAKGFLCACVAVLSTSL   83 (259)
Q Consensus         5 ~~n~al~~~~~~~~~~l~~~~p~~~~l~~~l~~~~~~~~~~~~~~~l~~~Gv~l~~~~~-~~~~~~G~~~~l~a~l~~a~   83 (259)
                      +.+.|++|++++.++++.++.|+++++++.+++|||++++++.+++++++|+.++..++ .+.+..|+.++++++++|+.
T Consensus        63 ~~~~a~~~~~~~~~~ii~~~~P~~~~~~~~l~~~e~~~~~~~~gi~i~~~Gv~li~~~~~~~~~~~G~~~~l~a~~~~a~  142 (260)
T TIGR00950        63 LYFVAVKRLPVGEAALLLYLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVLLLSDGNLSINPAGLLLGLGSGISFAL  142 (260)
T ss_pred             HHHHHHHhcChhhhHHHHhhhHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHhhccCCcccccHHHHHHHHHHHHHHHH
Confidence            45679999999999999999999999999999999999999999999999998876443 44567899999999999999


Q ss_pred             HHHHHHHHHhhcCCCHHHHHHhhhhHHHHHHHHHHHhhhhhccCcccccccCchhHHHHHHHHHHHH-HHHHHHHHHHhc
Q 025040           84 QQITIGSLQKKYSIGSFELLSKTAPIQAVSLLVLGPFVDYYLNGKFITTYKMTSGAILFIFLSCALA-VFCNVSQYLCIG  162 (259)
Q Consensus        84 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~  162 (259)
                      +.++.|+..++.+.++.....+.+..+.+.+.+.....+.     .   ...+...+..++..++++ .+....++++++
T Consensus       143 ~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-----~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~  214 (260)
T TIGR00950       143 GTVLYKRLVKKEGPELLQFTGWVLLLGALLLLPFAWFLGP-----N---PQALSLQWGALLYLGLIGTALAYFLWNKGLT  214 (260)
T ss_pred             HHHHHhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHhcCC-----C---CCcchHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            9999999876554445555555555555555444332221     1   112333444445455444 455566778999


Q ss_pred             ccCceeeehhhhhhhHHHHhhhhhhcCCcccccchhhHHHHHHHH
Q 025040          163 RFSATSFQVLGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGM  207 (259)
Q Consensus       163 ~~~~~~~si~~~~~pv~~~~~s~~~~~e~~s~~~~~G~~lii~g~  207 (259)
                      +.++.+++...+++|+++.+++++++||+++..+++|.++++.|+
T Consensus       215 ~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~  259 (260)
T TIGR00950       215 LVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAV  259 (260)
T ss_pred             cCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence            999999999999999999999999999999999999999999886

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=99.87  E-value=1.5e-21  Score=165.96  Aligned_cols=199  Identities=11%  Similarity=0.016  Sum_probs=153.8

Q ss_pred             eeeeee-cccchhHHHHHhhhhHHHHHHHHHHHhccccChhhhhhhhheeecceeeeec-ccccchHHHHHHHHHHHHHH
Q 025040            5 GMNFSL-MLNSVGFYQISKLSMIPVVCVMEWILHNKHYSKEVKMAVVVVVIGVGVCTIT-DVKVNAKGFLCACVAVLSTS   82 (259)
Q Consensus         5 ~~n~al-~~~~~~~~~~l~~~~p~~~~l~~~l~~~~~~~~~~~~~~~l~~~Gv~l~~~~-~~~~~~~G~~~~l~a~l~~a   82 (259)
                      +.+.+. ++++++.++++.++.|+++.+++.+ +|||++++++.+++++++|+.++..+ +.+.+..|++++++++++||
T Consensus        85 ~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~~Gv~ll~~~~~~~~~~~G~l~~l~a~~~~a  163 (292)
T PRK11272         85 MVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLEWLGIAIGLAGIVLLNSGGNLSGNPWGAILILIASASWA  163 (292)
T ss_pred             HHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchhHHHHHHHHHHhHHHHhcCcccccchHHHHHHHHHHHHHH
Confidence            345566 8999999999999999999999986 69999999999999999999987643 33456689999999999999


Q ss_pred             HHHHHHHHHHhhcCCCHHHHHHhhhhHHHHHHHHHHHhhhhhccCcccccccCchhHHHHHHHHHHHHH-HHHHHHHHHh
Q 025040           83 LQQITIGSLQKKYSIGSFELLSKTAPIQAVSLLVLGPFVDYYLNGKFITTYKMTSGAILFIFLSCALAV-FCNVSQYLCI  161 (259)
Q Consensus        83 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l  161 (259)
                      .+.+..|+..++   ++.....++...+...+.+.....+.     .. ....+...+..+++.++.+. .....+++++
T Consensus       164 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~-~~~~~~~~~~~i~~l~i~~s~~~~~l~~~~~  234 (292)
T PRK11272        164 FGSVWSSRLPLP---VGMMAGAAEMLAAGVVLLIASLLSGE-----RL-TALPTLSGFLALGYLAVFGSIIAISAYMYLL  234 (292)
T ss_pred             HHHHHHHhcCCC---cchHHHHHHHHHHHHHHHHHHHHcCC-----cc-cccCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999886532   33445566666665555544332221     11 01122334445555555543 4455566789


Q ss_pred             cccCceeeehhhhhhhHHHHhhhhhhcCCcccccchhhHHHHHHHHHHHHHH
Q 025040          162 GRFSATSFQVLGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYSWA  213 (259)
Q Consensus       162 ~~~~~~~~si~~~~~pv~~~~~s~~~~~e~~s~~~~~G~~lii~g~~~~~~~  213 (259)
                      ++.++...+...+++|+++.+++++++||+++..+++|.++++.|+++.++.
T Consensus       235 ~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~  286 (292)
T PRK11272        235 RNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTLG  286 (292)
T ss_pred             hhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999999987654

>KOG1443 consensus Predicted integral membrane protein [Function unknown]

Probab=99.86  E-value=7e-21  Score=155.31  Aligned_cols=208  Identities=20%  Similarity=0.331  Sum_probs=185.5

Q ss_pred             eeeeeeeecccchhHHHHHhhhhHHHHHHHHHHHhccccChhhhhhhhheeecceeeeecccccchHHHHHHHHHHHHHH
Q 025040            3 IAGMNFSLMLNSVGFYQISKLSMIPVVCVMEWILHNKHYSKEVKMAVVVVVIGVGVCTITDVKVNAKGFLCACVAVLSTS   82 (259)
Q Consensus         3 ~~~~n~al~~~~~~~~~~l~~~~p~~~~l~~~l~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~G~~~~l~a~l~~a   82 (259)
                      +.++|.|++|++++.|++.|++.++|+.+++.++.-||+++.-...+.+.-+|+++.++.+.+++..|..++..++++.+
T Consensus        98 IGLSN~sl~yVtlSlYTM~KSSsi~FIllFs~if~lEk~~w~L~l~v~lI~~Glflft~KsTqf~i~Gf~lv~~aS~~sG  177 (349)
T KOG1443|consen   98 IGLSNWSLEYVTLSLYTMTKSSSILFILLFSLIFKLEKFRWALVLIVLLIAVGLFLFTYKSTQFNIEGFFLVLAASLLSG  177 (349)
T ss_pred             cccccceeeeeeeeeeeeccccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhheeEEEecccceeehhHHHHHHHHHhhh
Confidence            67899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhhcC---CCHHHHHHhhhhHHHHHHHHHHHhhhhhccCccccccc-----CchhHHHHHHHHHHHHHHHH
Q 025040           83 LQQITIGSLQKKYS---IGSFELLSKTAPIQAVSLLVLGPFVDYYLNGKFITTYK-----MTSGAILFIFLSCALAVFCN  154 (259)
Q Consensus        83 ~~~v~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~  154 (259)
                      +...+.+.++++.+   -+|.+.++...+...+.+++....+|+.........+.     ........+.+.|..+++.-
T Consensus       178 lRW~~tQ~ll~~~~~~~~~P~~ti~~l~p~M~~~Ll~~~l~fEG~~~~~~s~~f~~~d~~~~~rv~g~i~l~g~laF~l~  257 (349)
T KOG1443|consen  178 LRWAFTQMLLRNQPSAKRNPIDTIFHLQPWMSIGLLPLSLLFEGLHLITSSSIFRFQDTGLILRVIGLISLGGLLAFLLE  257 (349)
T ss_pred             hhHHHHHHHHhcCccccCCCeeeHHHhhhHHHHHHHHHHHHHcccccchhhhHHHhcCccHHHHHHHHHHHHHHHHHHHH
Confidence            99999999987644   57889999999888989998888888754332222111     12345567778888899999


Q ss_pred             HHHHHHhcccCceeeehhhhhhhHHHHhhhhhhcCCcccccchhhHHHHHHHHHHH
Q 025040          155 VSQYLCIGRFSATSFQVLGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIY  210 (259)
Q Consensus       155 ~~~~~~l~~~~~~~~si~~~~~pv~~~~~s~~~~~e~~s~~~~~G~~lii~g~~~~  210 (259)
                      ++.+.++.+++..+.++.+..+-+.+.+++..+.+|+++...|.|..+++.|+..|
T Consensus       258 ~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~lN~~Gl~i~~agi~~~  313 (349)
T KOG1443|consen  258 FSEFLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKDQLSLLNWLGLAICLAGILLH  313 (349)
T ss_pred             HHHHheeeeccceeeeHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHh
Confidence            99999999999999999999999999999999999999999999999999999998

>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.85  E-value=6.7e-21  Score=157.28  Aligned_cols=214  Identities=22%  Similarity=0.290  Sum_probs=183.1

Q ss_pred             eeeeeeecccchhHHHHHhhhhHHHHHHHHHHHhccccChhhhhhhhheeecceeeeecccccchHHHHHHHHHHHHHHH
Q 025040            4 AGMNFSLMLNSVGFYQISKLSMIPVVCVMEWILHNKHYSKEVKMAVVVVVIGVGVCTITDVKVNAKGFLCACVAVLSTSL   83 (259)
Q Consensus         4 ~~~n~al~~~~~~~~~~l~~~~p~~~~l~~~l~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~G~~~~l~a~l~~a~   83 (259)
                      ..+-.+++|+++++++++|+..|+++++.+..++|.++++..|.++..+.+|......+|.+++..|+.|++.++++.+.
T Consensus        92 ~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~~~d~sf~~~gY~w~~~n~~~~a~  171 (314)
T KOG1444|consen   92 FTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAAFTDLSFNLRGYSWALANCLTTAA  171 (314)
T ss_pred             HHccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhccccceecchhHHHHHHHHHHHHH
Confidence            34556899999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhcCCCHHHHHHhhhhHHHHHHHHHHHhhhhhccCcccc-cccCchhHHHHHHHHHHHHHHHHHHHHHHhc
Q 025040           84 QQITIGSLQKKYSIGSFELLSKTAPIQAVSLLVLGPFVDYYLNGKFIT-TYKMTSGAILFIFLSCALAVFCNVSQYLCIG  162 (259)
Q Consensus        84 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  162 (259)
                      +.++.|+..+..+...+.+.+|.++++...+.....+++++. ..... +...+...+..+.++++++++.+++.+++.+
T Consensus       172 ~~v~~kk~vd~~~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~-~l~~~~~~~~~~~~~~~~~lScv~gf~isy~s~~ct~  250 (314)
T KOG1444|consen  172 FVVYVKKSVDSANLNKFGLVFYNNLLSLPPLLILSFITGELD-ALSLNFDNWSDSSVLVVMLLSCVMGFGISYTSFLCTR  250 (314)
T ss_pred             HHHHHHHhhccccccceeEEeehhHHHHHHHHHHHHHhcchH-HHHhhcccccchhHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            999999988877888899999999998888887776665432 11111 1122356778899999999999999999999


Q ss_pred             ccCceeeehhhhhhhHHHHhhhhhhcCCcccccchhhHHHHHHHHHHHHHHhhHHH
Q 025040          163 RFSATSFQVLGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYSWAVEAEK  218 (259)
Q Consensus       163 ~~~~~~~si~~~~~pv~~~~~s~~~~~e~~s~~~~~G~~lii~g~~~~~~~~~~~~  218 (259)
                      ..|+++.++++..+...+.+-..+++|++.++..++|..+.++|.++|++.+++++
T Consensus       251 ~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ggv~Y~~~~~~~k  306 (314)
T KOG1444|consen  251 VNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGGVLYSYATFRKK  306 (314)
T ss_pred             hccccceeehhhhhhHHHHHHHHhcCCceechhhhHHHHHHhhhhhHHhhhhhhhc
Confidence            99999999999555555555555556668999999999999999999999886653

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=99.84  E-value=2e-20  Score=158.24  Aligned_cols=199  Identities=14%  Similarity=0.156  Sum_probs=144.5

Q ss_pred             eeeeeecccchhHHHHHhhhhHHHHHHHHHHHhccccChhhhhhhhheeecceeeeeccc-ccchHHHHHHHHHHHHHHH
Q 025040            5 GMNFSLMLNSVGFYQISKLSMIPVVCVMEWILHNKHYSKEVKMAVVVVVIGVGVCTITDV-KVNAKGFLCACVAVLSTSL   83 (259)
Q Consensus         5 ~~n~al~~~~~~~~~~l~~~~p~~~~l~~~l~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~-~~~~~G~~~~l~a~l~~a~   83 (259)
                      +.+.++++.+++.++.+.++.|+++.+++++++|||+++++|.|+.++++|+.++..++. ..+..|+.++++++++|+.
T Consensus        79 ~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~~~~~~~~~~g~~~~l~aal~~a~  158 (281)
T TIGR03340        79 GLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGLSRFAQHRRKAYAWALAAALGTAI  158 (281)
T ss_pred             HHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHH
Confidence            456789999999999999999999999999999999999999999999999998765432 3456788899999999999


Q ss_pred             HHHHHHHHHhhcCCCHHH-HHHhhhhHHHHHH-HHHHHhhhhhccCcccccccCchhHHHHHHHHHHHHHHHHHHHHHHh
Q 025040           84 QQITIGSLQKKYSIGSFE-LLSKTAPIQAVSL-LVLGPFVDYYLNGKFITTYKMTSGAILFIFLSCALAVFCNVSQYLCI  161 (259)
Q Consensus        84 ~~v~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  161 (259)
                      |.+..|+..++  .++.. ...+. ..+.+.. .+..+..... ......  ..+...+..+...++.+...+..+++.+
T Consensus       159 ~~i~~k~~~~~--~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~s~l~~~l~~~al  232 (281)
T TIGR03340       159 YSLSDKAAALG--VPAFYSALGYL-GIGFLAMGWPFLLLYLKR-HGRSMF--PYARQILPSATLGGLMIGGAYALVLWAM  232 (281)
T ss_pred             hhhhccccccc--hhcccccHHHH-HHHHHHHHHHHHHHHHHH-hccchh--hhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99988865332  22211 11111 1111111 1221111100 000000  1111223344455555556666777899


Q ss_pred             cccCceeeehhhhhhhHHHHhhhhhhcCCcccccchhhHHHHHHHHHH
Q 025040          162 GRFSATSFQVLGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVI  209 (259)
Q Consensus       162 ~~~~~~~~si~~~~~pv~~~~~s~~~~~e~~s~~~~~G~~lii~g~~~  209 (259)
                      ++.++...+...+++|+++.++|++++||+++..+++|+++++.|+++
T Consensus       233 ~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l  280 (281)
T TIGR03340       233 TRLPVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV  280 (281)
T ss_pred             hhCCceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence            999999999999999999999999999999999999999999999875

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=99.83  E-value=6.9e-20  Score=155.87  Aligned_cols=192  Identities=12%  Similarity=0.074  Sum_probs=140.7

Q ss_pred             eeeeeecccchhHHHHHhhhhHHHHHHHHHHHhccccChhhhhhhhheeecceeeeecc---cccchHHHHHHHHHHHHH
Q 025040            5 GMNFSLMLNSVGFYQISKLSMIPVVCVMEWILHNKHYSKEVKMAVVVVVIGVGVCTITD---VKVNAKGFLCACVAVLST   81 (259)
Q Consensus         5 ~~n~al~~~~~~~~~~l~~~~p~~~~l~~~l~~~~~~~~~~~~~~~l~~~Gv~l~~~~~---~~~~~~G~~~~l~a~l~~   81 (259)
                      +.+.+++|++++.++++..+.|+++.+++    +|++.+.  ..+.++++|+.++...+   .+.+..|++++++++++|
T Consensus        87 ~~~~al~~~~~~~a~~l~~t~Pi~~~ll~----~~~~~~~--~~~~i~~~Gv~li~~~~~~~~~~~~~G~ll~l~aa~~~  160 (293)
T PRK10532         87 LFYLSIQTVPLGIAVALEFTGPLAVALFS----SRRPVDF--VWVVLAVLGLWFLLPLGQDVSHVDLTGAALALGAGACW  160 (293)
T ss_pred             HHHHHHhcccHHHHHHHHHHHHHHHHHHh----cCChHHH--HHHHHHHHHHheeeecCCCcccCChHHHHHHHHHHHHH
Confidence            45678999999999999999999998886    3555544  45667789988875322   234567999999999999


Q ss_pred             HHHHHHHHHHHhhcCCCHHHHHHhhhhHHHHHHHHHHHhhhhhccCcccccccCchhHHHHHHHHHHHHHH-HHHHHHHH
Q 025040           82 SLQQITIGSLQKKYSIGSFELLSKTAPIQAVSLLVLGPFVDYYLNGKFITTYKMTSGAILFIFLSCALAVF-CNVSQYLC  160 (259)
Q Consensus        82 a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~  160 (259)
                      +.|.+..|+..++  .++... .+....+.+.+.+.....+.        ...++...+...++.++++.. ....+++.
T Consensus       161 a~~~v~~r~~~~~--~~~~~~-~~~~~~~~~~l~~~~~~~~~--------~~~~~~~~~~~~l~lgv~~t~~~~~l~~~~  229 (293)
T PRK10532        161 AIYILSGQRAGAE--HGPATV-AIGSLIAALIFVPIGALQAG--------EALWHWSILPLGLAVAILSTALPYSLEMIA  229 (293)
T ss_pred             HHHHHHHHHHhcc--CCchHH-HHHHHHHHHHHHHHHHHccC--------cccCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999998654  355554 34444444444333222110        111233333333445555443 44456789


Q ss_pred             hcccCceeeehhhhhhhHHHHhhhhhhcCCcccccchhhHHHHHHHHHHHHHH
Q 025040          161 IGRFSATSFQVLGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYSWA  213 (259)
Q Consensus       161 l~~~~~~~~si~~~~~pv~~~~~s~~~~~e~~s~~~~~G~~lii~g~~~~~~~  213 (259)
                      +++.++..+++..+++|+++.++|++++||+++..+++|+++++.|+..+.+.
T Consensus       230 ~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~~  282 (293)
T PRK10532        230 LTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTLT  282 (293)
T ss_pred             HHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhc
Confidence            99999999999999999999999999999999999999999999999998754

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.80  E-value=1.1e-19  Score=143.24  Aligned_cols=208  Identities=13%  Similarity=0.102  Sum_probs=173.1

Q ss_pred             ceeeeeeeecccchhHHHHHhhhhHHHHHHHHHHHhccccChhhhhhhhheeecceeeeeccc-------ccchHHHHHH
Q 025040            2 SIAGMNFSLMLNSVGFYQISKLSMIPVVCVMEWILHNKHYSKEVKMAVVVVVIGVGVCTITDV-------KVNAKGFLCA   74 (259)
Q Consensus         2 ~~~~~n~al~~~~~~~~~~l~~~~p~~~~l~~~l~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~-------~~~~~G~~~~   74 (259)
                      ++.-+|.++||+|.++..+-+++-|+-++++++++.|++.+++++.++++.++|+++..+.+.       ..-..|-++.
T Consensus        98 AMVssN~Alq~vpYPTqVlgKScKPIPVMilGVl~~~KsY~w~kY~cVL~IV~GValFmYK~~Kv~g~e~~t~g~GElLL  177 (337)
T KOG1580|consen   98 AMVSSNQALQYVPYPTQVLGKSCKPIPVMILGVLFAHKSYHWRKYCCVLMIVVGVALFMYKENKVGGAEDKTFGFGELLL  177 (337)
T ss_pred             HHHhccchhcccCCcHHHhcccCCCcceeeeehhhhcccccHHHHHHHHHHHHHHHHhhccccccCCCcccccchHHHHH
Confidence            356789999999999999999999999999999999999999999999999999999876532       1224688999


Q ss_pred             HHHHHHHHHHHHHHHHHHhhcCCCHHHHHHhhhhHHHHHHHHHHHhhhhhccCcccccccCchhHHHHHHHHHHHHHHHH
Q 025040           75 CVAVLSTSLQQITIGSLQKKYSIGSFELLSKTAPIQAVSLLVLGPFVDYYLNGKFITTYKMTSGAILFIFLSCALAVFCN  154 (259)
Q Consensus        75 l~a~l~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (259)
                      +++--..++....++++.+.+..+...++.++++++.+.+-....+.+..++.  ..-..-.+..++-+...++.+...+
T Consensus       178 ~lSL~mDGlTg~~Qdrira~yq~~g~~MM~~~NlwStL~Lg~g~lfTGElweF--~yF~~RhP~~~~~l~l~ai~s~LGQ  255 (337)
T KOG1580|consen  178 ILSLAMDGLTGSIQDRIRASYQRTGTSMMFYTNLWSTLYLGAGLLFTGELWEF--FYFVQRHPYVFWDLTLLAIASCLGQ  255 (337)
T ss_pred             HHHHHhcccchhHHHHHHHhhccCchhhHHHHHHHHHHHhhhhheehhhHHHH--HHHHHhccHHHHHHHHHHHHHHhhh
Confidence            99999999999999999888888888899999999887776555544322111  0001123455666777777788888


Q ss_pred             HHHHHHhcccCceeeehhhhhhhHHHHhhhhhhcCCcccccchhhHHHHHHHHHHHH
Q 025040          155 VSQYLCIGRFSATSFQVLGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYS  211 (259)
Q Consensus       155 ~~~~~~l~~~~~~~~si~~~~~pv~~~~~s~~~~~e~~s~~~~~G~~lii~g~~~~~  211 (259)
                      .+.|..+...+|.+.|++...+..++++.|+++|+.+++..||+|.++++.|...=.
T Consensus       256 ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~D~  312 (337)
T KOG1580|consen  256 WFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTADV  312 (337)
T ss_pred             HHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhhHh
Confidence            888888999999999999999999999999999999999999999999999977643

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=99.77  E-value=1.1e-17  Score=141.51  Aligned_cols=197  Identities=18%  Similarity=0.177  Sum_probs=153.6

Q ss_pred             eeeeeecccchhHHHHHhhhhHHHHHHHHH-HHhccccChhhhhhhhheeecceeeeecccccc---hHHHHHHHHHHHH
Q 025040            5 GMNFSLMLNSVGFYQISKLSMIPVVCVMEW-ILHNKHYSKEVKMAVVVVVIGVGVCTITDVKVN---AKGFLCACVAVLS   80 (259)
Q Consensus         5 ~~n~al~~~~~~~~~~l~~~~p~~~~l~~~-l~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~~~~---~~G~~~~l~a~l~   80 (259)
                      +.+.++++++++.++.+.++.|+++.++++ +++|||++++++.++++.+.|+.++..++...+   ..|+.+++.++++
T Consensus        86 ~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~~~~~~~~~g~~~~l~a~~~  165 (292)
T COG0697          86 LLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGGGGGGILSLLGLLLALAAALL  165 (292)
T ss_pred             HHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCCcchhHHHHHHHHHHHHHHH
Confidence            456789999999999999999999999997 777999999999999999999999988766543   5899999999999


Q ss_pred             HHHHHHHHHHHHhhcCCCHHHHHH-hhhhHHHHHHHHHHHhhhhhccCcccccccCchhHHHHHHHHHHHHH-HHHHHHH
Q 025040           81 TSLQQITIGSLQKKYSIGSFELLS-KTAPIQAVSLLVLGPFVDYYLNGKFITTYKMTSGAILFIFLSCALAV-FCNVSQY  158 (259)
Q Consensus        81 ~a~~~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~  158 (259)
                      ++++.+..|+..   +.++..... +...  ...+.........    ..   .......+......++.+. .....++
T Consensus       166 ~a~~~~~~~~~~---~~~~~~~~~~~~~~--~~~~~~~~~~~~~----~~---~~~~~~~~~~~~~~g~~~~~i~~~~~~  233 (292)
T COG0697         166 WALYTALVKRLS---RLGPVTLALLLQLL--LALLLLLLFFLSG----FG---APILSRAWLLLLYLGVFSTGLAYLLWY  233 (292)
T ss_pred             HHHHHHHHHHhc---CCChHHHHHHHHHH--HHHHHHHHHHhcc----cc---ccCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999876   345555554 3321  1111111111110    00   2233344455556666655 4666677


Q ss_pred             HHhcccCceeeehhhhhhhHHHHhhhhhhcCCcccccchhhHHHHHHHHHHHHHH
Q 025040          159 LCIGRFSATSFQVLGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYSWA  213 (259)
Q Consensus       159 ~~l~~~~~~~~si~~~~~pv~~~~~s~~~~~e~~s~~~~~G~~lii~g~~~~~~~  213 (259)
                      +.+++.++...+...+++|+.+.+++++++||+++..+++|.++++.|+.+....
T Consensus       234 ~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~~  288 (292)
T COG0697         234 YALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLR  288 (292)
T ss_pred             HHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcc
Confidence            8999999999999999999999999999999999999999999999999997654

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=99.75  E-value=1.9e-17  Score=127.44  Aligned_cols=143  Identities=30%  Similarity=0.475  Sum_probs=125.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhh-----cCCCHHHHHHhhhhHHHHHHHHHHHhhhhhccCccccccc-----CchhH
Q 025040           70 GFLCACVAVLSTSLQQITIGSLQKK-----YSIGSFELLSKTAPIQAVSLLVLGPFVDYYLNGKFITTYK-----MTSGA  139 (259)
Q Consensus        70 G~~~~l~a~l~~a~~~v~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~  139 (259)
                      |+++++.|.++.++++++.|+..++     .+.++.++..+.++.+.+.+++..++.|............     .+...
T Consensus         1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~   80 (153)
T PF03151_consen    1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF   80 (153)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence            7889999999999999999999877     6899999999999999999999888877643221111111     14467


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhcccCceeeehhhhhhhHHHHhhhhhhcCCcccccchhhHHHHHHHHHHHHH
Q 025040          140 ILFIFLSCALAVFCNVSQYLCIGRFSATSFQVLGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYSW  212 (259)
Q Consensus       140 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~si~~~~~pv~~~~~s~~~~~e~~s~~~~~G~~lii~g~~~~~~  212 (259)
                      +..++.+++.++..|++.+.+++++||++.++.+.+|.+..++.|+++|+|++|..+++|.++.+.|+++|++
T Consensus        81 ~~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ysy  153 (153)
T PF03151_consen   81 IFLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYSY  153 (153)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheeeC
Confidence            7888999999999999999999999999999999999999999999999999999999999999999999974

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.75  E-value=2e-17  Score=135.21  Aligned_cols=213  Identities=16%  Similarity=0.170  Sum_probs=179.4

Q ss_pred             ceeeeeeeecccchhHHHHHhhhhHHHHHHHHHHHhccccChhhhhhhhheeecceeeeeccc---------ccchHHHH
Q 025040            2 SIAGMNFSLMLNSVGFYQISKLSMIPVVCVMEWILHNKHYSKEVKMAVVVVVIGVGVCTITDV---------KVNAKGFL   72 (259)
Q Consensus         2 ~~~~~n~al~~~~~~~~~~l~~~~p~~~~l~~~l~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~---------~~~~~G~~   72 (259)
                      |-.|+.-|++|+|-++..+.+++--+-+++++.++.|+|++.++++...++-.|+.+....+.         +.++.|+.
T Consensus        96 s~~~~yeaLKyvSyPtq~LaKscKmIPVmlmg~Lvy~~ky~~~eYl~~~LIs~GvsiF~l~~~s~s~~~~g~~ns~~G~~  175 (327)
T KOG1581|consen   96 SSWCGYEALKYVSYPTQTLAKSCKMIPVMLMGTLVYGRKYSSFEYLVAFLISLGVSIFSLFPNSDSSSKSGRENSPIGIL  175 (327)
T ss_pred             chHHHHHHHHhccchHHHHHHHhhhhHHHHHHHHHhcCccCcHHHHHHHHHHhheeeEEEecCCCCccccCCCCchHhHH
Confidence            345677799999999999999999999999999999999999999999999999998764321         25679999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHhhhhHHHHHHHHHHHhhhhhccCcccccccCchhHHHHHHHHHHHHHH
Q 025040           73 CACVAVLSTSLQQITIGSLQKKYSIGSFELLSKTAPIQAVSLLVLGPFVDYYLNGKFITTYKMTSGAILFIFLSCALAVF  152 (259)
Q Consensus        73 ~~l~a~l~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (259)
                      +.....+..++.+..++++.+++++++++++++.+++..+........-+...+  ...-...++..+.-+++.+.++.+
T Consensus       176 Ll~~~L~fDgfTn~tQd~lf~~~k~s~~~mM~~vNLf~~i~~~~~li~qg~~~~--av~F~~~hp~~~~Di~l~s~~gav  253 (327)
T KOG1581|consen  176 LLFGYLLFDGFTNATQDSLFKKYKVSSLHMMFGVNLFSAILNGTYLILQGHLLP--AVSFIKEHPDVAFDILLYSTCGAV  253 (327)
T ss_pred             HHHHHHHHHhhHHhHHHHHhccCCccHhHHHHHHHHHHHHHHHHhhhcCCCCch--HHHHHHcChhHHHHHHHHHHhhhh
Confidence            999999999999999999999999999999999998887766655222111111  111113456667777888888888


Q ss_pred             HHHHHHHHhcccCceeeehhhhhhhHHHHhhhhhhcCCcccccchhhHHHHHHHHHHHHHHhhH
Q 025040          153 CNVSQYLCIGRFSATSFQVLGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYSWAVEA  216 (259)
Q Consensus       153 ~~~~~~~~l~~~~~~~~si~~~~~pv~~~~~s~~~~~e~~s~~~~~G~~lii~g~~~~~~~~~~  216 (259)
                      .+.+.|+.+++.++.+.+.+..++.++++.++.+.||.+++..||.|..+++.|+.+-.+.+++
T Consensus       254 GQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l~~~~k~~  317 (327)
T KOG1581|consen  254 GQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFLEILLKKK  317 (327)
T ss_pred             hhheehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHHHHHHHHh
Confidence            8888899999999999999999999999999999999999999999999999999887766655

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=99.73  E-value=3.2e-17  Score=135.09  Aligned_cols=194  Identities=14%  Similarity=0.082  Sum_probs=153.9

Q ss_pred             eeeeeecccchhHHHHHhhhhHHHHHHHHHHHhccccChhhhhhhhheeecceeeeecccc-----------------cc
Q 025040            5 GMNFSLMLNSVGFYQISKLSMIPVVCVMEWILHNKHYSKEVKMAVVVVVIGVGVCTITDVK-----------------VN   67 (259)
Q Consensus         5 ~~n~al~~~~~~~~~~l~~~~p~~~~l~~~l~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~~-----------------~~   67 (259)
                      +.++++++++++++++++.+..++++++.++++|+|++++||.++++.++|+.+...++..                 ..
T Consensus        33 L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~~~~~~~~~~~~~~~~~~~~  112 (244)
T PF04142_consen   33 LQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQSSDNSSSSSVHHDASNQNP  112 (244)
T ss_pred             HHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCccccccccccccccccccchh
Confidence            3457899999999999999999999999999999999999999999999999997643211                 13


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHhhhhHHHHHHHHHHHhhhhhccCcccccccCchhHHHHHHHHH
Q 025040           68 AKGFLCACVAVLSTSLQQITIGSLQKKYSIGSFELLSKTAPIQAVSLLVLGPFVDYYLNGKFITTYKMTSGAILFIFLSC  147 (259)
Q Consensus        68 ~~G~~~~l~a~l~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  147 (259)
                      ..|+.++++++++.++..++.|++.|+.+.+.+....+...++.+..++.....+.....+...-..++...|..++..+
T Consensus       113 ~~G~~~vl~~~~~S~~agVy~E~~lK~~~~s~~~~N~qL~~~gi~~~~~~~~~~~~~~~~~~g~f~G~~~~~~~~i~~~a  192 (244)
T PF04142_consen  113 LLGLLAVLAAAFLSGFAGVYFEKLLKRSNVSLWIQNMQLYLFGILFNLLALLLSDGSAISESGFFHGYSWWVWIVIFLQA  192 (244)
T ss_pred             HhHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHhcccccccccCCchhhcchHHHHHHHHHH
Confidence            58999999999999999999999999888788877777777777776665444332111111111234555555656555


Q ss_pred             HHHHHHHHHHHHHhcccCceeeehhhhhhhHHHHhhhhhhcCCcccccchhhHHH
Q 025040          148 ALAVFCNVSQYLCIGRFSATSFQVLGHMKTVCVLTLGWLLFDSALTFKNISGMIL  202 (259)
Q Consensus       148 ~~~~~~~~~~~~~l~~~~~~~~si~~~~~pv~~~~~s~~~~~e~~s~~~~~G~~l  202 (259)
                      +.|....+    .+|+.+...-+.......+++.++++++||.++|....+|..+
T Consensus       193 ~gGllva~----v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~~s~~f~lg~~~  243 (244)
T PF04142_consen  193 IGGLLVAF----VLKYADNIVKGFATAVSIVLTAVLSVLLFGFPPSLSFLLGAAL  243 (244)
T ss_pred             HhhHHHHH----HHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHhhheec
Confidence            55555433    5799999999999999999999999999999999999999875

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=99.72  E-value=3.8e-17  Score=137.05  Aligned_cols=208  Identities=15%  Similarity=0.073  Sum_probs=165.6

Q ss_pred             eeeeeecccchhHHHHHhhhhHHHHHHHHHHHhccccChhhhhhhhheeecceeeeeccc--------ccchHHHHHHHH
Q 025040            5 GMNFSLMLNSVGFYQISKLSMIPVVCVMEWILHNKHYSKEVKMAVVVVVIGVGVCTITDV--------KVNAKGFLCACV   76 (259)
Q Consensus         5 ~~n~al~~~~~~~~~~l~~~~p~~~~l~~~l~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~--------~~~~~G~~~~l~   76 (259)
                      +.|.|+.+++++..+++.++.-+|+..++.++..||+++.|.+++.+.++|++++..+|.        .....|.+++++
T Consensus       175 ~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s~~~~~~~a~~~llG~llaL~  254 (416)
T KOG2765|consen  175 TSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSKQNSDLPASRPLLGNLLALL  254 (416)
T ss_pred             HHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEeccccccccCCccchhHHHHHHHH
Confidence            578999999999999999999999999999999999999999999999999999988743        234789999999


Q ss_pred             HHHHHHHHHHHHHHHHhhc--CCCHHHHHHhhhhHHHHHHHHHHHhhhhhccCcccccccCchhHHHHHHHHHHHHHHHH
Q 025040           77 AVLSTSLQQITIGSLQKKY--SIGSFELLSKTAPIQAVSLLVLGPFVDYYLNGKFITTYKMTSGAILFIFLSCALAVFCN  154 (259)
Q Consensus        77 a~l~~a~~~v~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (259)
                      +++.||+|.++.||...++  ++|...+.++..++.++.+.+...+.+..  .......+...++...++.+.+..+...
T Consensus       255 sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~~--~~e~F~lP~~~q~~~vv~~~ligtvvSD  332 (416)
T KOG2765|consen  255 SALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILDFF--GEERFELPSSTQFSLVVFNNLIGTVVSD  332 (416)
T ss_pred             HHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHh--ccCcccCCCCceeEeeeHhhHHHHHHHH
Confidence            9999999999999877554  56766666666555555555444333322  1111122223333334444444456677


Q ss_pred             HHHHHHhcccCceeeehhhhhhhHHHHhhhhhhcCCcccccchhhHHHHHHHHHHHHHHh
Q 025040          155 VSQYLCIGRFSATSFQVLGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYSWAV  214 (259)
Q Consensus       155 ~~~~~~l~~~~~~~~si~~~~~pv~~~~~s~~~~~e~~s~~~~~G~~lii~g~~~~~~~~  214 (259)
                      +.+.++.--++|+.+++...+....+.+...++=+.++|+.+++|.+.+++|.+..++..
T Consensus       333 ylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~Fv~vn~~~  392 (416)
T KOG2765|consen  333 YLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVGFVIVNISS  392 (416)
T ss_pred             HHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhheeccc
Confidence            888888888999999999999999999999999999999999999999999999987654

>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=99.72  E-value=2.6e-17  Score=128.89  Aligned_cols=210  Identities=19%  Similarity=0.284  Sum_probs=183.1

Q ss_pred             eeeecccchhHHHHHhhhhHHHHHHHHHHHhccccChhhhhhhhheeecceeeeecccc--------cchHHHHHHHHHH
Q 025040            7 NFSLMLNSVGFYQISKLSMIPVVCVMEWILHNKHYSKEVKMAVVVVVIGVGVCTITDVK--------VNAKGFLCACVAV   78 (259)
Q Consensus         7 n~al~~~~~~~~~~l~~~~p~~~~l~~~l~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~~--------~~~~G~~~~l~a~   78 (259)
                      --++||++++.|++.++++.+.++..+.+++|.|.+..+..+..+++..-+...++|.+        .+ .|++|+...+
T Consensus        86 SKsLqyL~vpiYTiFKNltII~iAygEvl~Fgg~vtsl~l~SFilMvlSS~va~w~D~q~~~~~~~~lN-~GY~Wm~~Nc  164 (309)
T COG5070          86 SKSLQYLAVPIYTIFKNLTIILIAYGEVLFFGGRVTSLELLSFILMVLSSVVATWGDQQASAFKAQILN-PGYLWMFTNC  164 (309)
T ss_pred             ccceeeeeeeHHHHhccceeehhHhhHHHHhcCccchhhHHHHHHHHHHHHHhccchhhHHHHHhcccC-CceEEEehhh
Confidence            45899999999999999999999999999999999999999999999998888888763        23 5999999999


Q ss_pred             HHHHHHHHHHHHHHhhcCCCHHHHHHhhhhHHHHHHHHHHHhhhhhccCcccccccCchhHHHHHHHHHHHHHHHHHHHH
Q 025040           79 LSTSLQQITIGSLQKKYSIGSFELLSKTAPIQAVSLLVLGPFVDYYLNGKFITTYKMTSGAILFIFLSCALAVFCNVSQY  158 (259)
Q Consensus        79 l~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (259)
                      +..+.+-...|+..+-.+...++.++|.+..+...++.+..++|.+-.++.  ..+........++++|+++++.+++.-
T Consensus       165 lssaafVL~mrkri~ltNf~d~dtmfYnNllslPiL~~~s~~~edws~~n~--annl~~d~l~am~ISgl~svgiSy~sa  242 (309)
T COG5070         165 LSSAAFVLIMRKRIKLTNFKDFDTMFYNNLLSLPILLSFSFLFEDWSPGNL--ANNLSVDSLMAMFISGLCSVGISYCSA  242 (309)
T ss_pred             HhHHHHHHHHHHhhcccccchhhHHHHhhhHHHHHHHHHHHHhccCCcchh--hcCCChHHHHHHHHHHHHHhhhhhccc
Confidence            999999999998776666777899999999999998888888876533322  123444556688999999999999999


Q ss_pred             HHhcccCceeeehhhhhhhHHHHhhhhhhcCCcccccchhhHHHHHHHHHHHHHHhhHHHh
Q 025040          159 LCIGRFSATSFQVLGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYSWAVEAEKQ  219 (259)
Q Consensus       159 ~~l~~~~~~~~si~~~~~pv~~~~~s~~~~~e~~s~~~~~G~~lii~g~~~~~~~~~~~~~  219 (259)
                      |+++-++.++.++++.++..-..+.|.++|||+.+...+..+.+-..+.++|..++.++++
T Consensus       243 WcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~si~sillGflsg~iYavaks~k~q  303 (309)
T COG5070         243 WCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSGAIYAVAKSKKQQ  303 (309)
T ss_pred             eeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            9999999999999999999999999999999999999999999999999999988765443

>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]

Probab=99.71  E-value=1.9e-16  Score=127.79  Aligned_cols=212  Identities=17%  Similarity=0.266  Sum_probs=174.5

Q ss_pred             eeeeeeecc-cchhHHHHHhhhhHHHHHHHHHHHhccccChhhhhhhhheeecceeeeec---ccc--------------
Q 025040            4 AGMNFSLML-NSVGFYQISKLSMIPVVCVMEWILHNKHYSKEVKMAVVVVVIGVGVCTIT---DVK--------------   65 (259)
Q Consensus         4 ~~~n~al~~-~~~~~~~~l~~~~p~~~~l~~~l~~~~~~~~~~~~~~~l~~~Gv~l~~~~---~~~--------------   65 (259)
                      .++|.++++ ++.+..-+.|+-.++-++++++++.|+|.+.+|+.++++..+|+++....   |..              
T Consensus        79 v~NN~al~f~I~~PlHiIfRsgsll~nM~~g~il~~k~Ys~~Qy~Sv~~iTiGiiIcTl~s~~d~~~~~~~l~~~~~~~~  158 (330)
T KOG1583|consen   79 VTNNYALKFNIPMPLHIIFRSGSLLANMILGWILLGKRYSLRQYSSVLMITIGIIICTLFSSKDGRSKLSGLDSGSAQSD  158 (330)
T ss_pred             eeccceeeecccceEEEEEecCcHHHHHHHHHHhccceeehhhhhhHHhhhhhheeEEeecCcchhhhhcccccCccccc
Confidence            578999976 49999999999999999999999999999999999999999999997642   111              


Q ss_pred             cc--hHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHhhhhHHHHHHHHHHH-hhhhh---ccCccc--cccc-Cc
Q 025040           66 VN--AKGFLCACVAVLSTSLQQITIGSLQKKYSIGSFELLSKTAPIQAVSLLVLGP-FVDYY---LNGKFI--TTYK-MT  136 (259)
Q Consensus        66 ~~--~~G~~~~l~a~l~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~---~~~~~~--~~~~-~~  136 (259)
                      .-  ..|+.+..++.+..|...++++..-++++-|+-+.++|.+.......+++.- ....+   ...+..  .... .-
T Consensus       159 ~~~w~iGi~lL~~al~~sa~mgiyqE~~Y~kyGKh~~EalFytH~LsLP~Flf~~~div~~~~~~~~se~~~~p~~g~~v  238 (330)
T KOG1583|consen  159 FFWWLIGIALLVFALLLSAYMGIYQETTYQKYGKHWKEALFYTHFLSLPLFLFMGDDIVSHWRLAFKSESYLIPLLGFKV  238 (330)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHhccchHHHhcchHHHHHHHHhcCcceeccccCccc
Confidence            11  2688999999999999999999999999999999999999887777766642 11111   111100  0111 13


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHhcccCceeeehhhhhhhHHHHhhhhhhcCCcccccchhhHHHHHHHHHHHHHHhh
Q 025040          137 SGAILFIFLSCALAVFCNVSQYLCIGRFSATSFQVLGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYSWAVE  215 (259)
Q Consensus       137 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~si~~~~~pv~~~~~s~~~~~e~~s~~~~~G~~lii~g~~~~~~~~~  215 (259)
                      +..|++++.+.+.+++..-..|.+..++++.+++++-++++.++.++|+..|+.+++++.|+|.+++..|..+|.....
T Consensus       239 P~~~~yLl~n~L~Qy~CikgVy~L~te~~sLTVTlvltlRKFvSLl~SiiyF~Npft~~h~lGa~lVF~Gt~~fa~~~~  317 (330)
T KOG1583|consen  239 PSMWVYLLFNVLTQYFCIKGVYILTTETSSLTVTLVLTLRKFVSLLFSIIYFENPFTPWHWLGAALVFFGTLLFANVWN  317 (330)
T ss_pred             cHHHHHHHHHHHHHHHHHHhhhhhhceecceEEEEeeeHHHHHHHhheeeEecCCCCHHHHHHHHHHHHHHHHHHHHHc
Confidence            5677889999999999877778888999999999999999999999999999999999999999999999999976554

>KOG3912 consensus Predicted integral membrane protein [General function prediction only]

Probab=99.70  E-value=6.9e-17  Score=130.56  Aligned_cols=213  Identities=16%  Similarity=0.202  Sum_probs=169.8

Q ss_pred             eeeeeeeecccchhHHHHHhhhhHHHHHHHHHHHhccccChhhhhhhhheeecceeeeeccc----------ccchHHHH
Q 025040            3 IAGMNFSLMLNSVGFYQISKLSMIPVVCVMEWILHNKHYSKEVKMAVVVVVIGVGVCTITDV----------KVNAKGFL   72 (259)
Q Consensus         3 ~~~~n~al~~~~~~~~~~l~~~~p~~~~l~~~l~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~----------~~~~~G~~   72 (259)
                      ....|.++.+++++.+|+++....+|+.+++.-+++++++.+||+++.....|++.+...|.          +....|+.
T Consensus       100 sslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~d~~~~~~p~~d~s~iitGdl  179 (372)
T KOG3912|consen  100 SSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSLDVHLVTDPYTDYSSIITGDL  179 (372)
T ss_pred             hHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeeeecccccCCccccccchhhhH
Confidence            34578899999999999999999999999999999999999999999999999999876542          23358999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHhhhhHHHHHHHHHHHhhhhhccC--------cccccc-------cCch
Q 025040           73 CACVAVLSTSLQQITIGSLQKKYSIGSFELLSKTAPIQAVSLLVLGPFVDYYLNG--------KFITTY-------KMTS  137 (259)
Q Consensus        73 ~~l~a~l~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~-------~~~~  137 (259)
                      +++++.+..|.+.++.+|..++++++|.+...|..++|.+.+-..+..+.....+        ..++++       +-.+
T Consensus       180 lIiiaqiivaiQ~v~Eek~l~~~nV~pl~avg~eGlfG~v~~slL~i~m~yi~~~~sfS~~~~g~~eD~~~~~~~~~e~p  259 (372)
T KOG3912|consen  180 LIIIAQIIVAIQMVCEEKQLKKSNVAPLQAVGWEGLFGLVILSLLAIPMYYIPSGDSFSCNPRGVLEDWGDAFAALQESP  259 (372)
T ss_pred             HHHHHHHHHHHHHHHHHhhhhhccCCHHHHhhhhhhHHHHHHHHHHHHHhheecCCcCcCCCCcchhhHHHHHHHhcCCc
Confidence            9999999999999999999999999999999999999866554443332221111        001111       1122


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhcccCceeeehhhhhhhHHHHhhhhhhcCCcccccchhhHHHHHHHHHHHHHHhh
Q 025040          138 GAILFIFLSCALAVFCNVSQYLCIGRFSATSFQVLGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYSWAVE  215 (259)
Q Consensus       138 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~si~~~~~pv~~~~~s~~~~~e~~s~~~~~G~~lii~g~~~~~~~~~  215 (259)
                      ..........+.-.+.|+......+..|+++-.++..++..+-.+++..+..|.+...|+.|.++.+.|+.+|+..-+
T Consensus       260 ~l~val~~~~vSiAffNfaGlsitk~~SattRmllD~lRt~~IWv~si~m~~E~f~llqilGFliLi~Gi~lY~~il~  337 (372)
T KOG3912|consen  260 SLAVALIGFTVSIAFFNFAGLSITKELSATTRMLLDSLRTYVIWVFSIAMGWEYFHLLQILGFLILIMGIILYNQILF  337 (372)
T ss_pred             hhHHHHhhhhhheeeeeehhhHHHHHhhHHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            222222233333444677777889999999999999999999999999999999999999999999999999986543

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=99.69  E-value=2.9e-16  Score=131.79  Aligned_cols=206  Identities=14%  Similarity=0.137  Sum_probs=164.4

Q ss_pred             eeeeecccchhHHHHHhhhhHHHHHHHHHHHhccccChhhhhhhhheeecceeeeecc-----------cccchHHHHHH
Q 025040            6 MNFSLMLNSVGFYQISKLSMIPVVCVMEWILHNKHYSKEVKMAVVVVVIGVGVCTITD-----------VKVNAKGFLCA   74 (259)
Q Consensus         6 ~n~al~~~~~~~~~~l~~~~p~~~~l~~~l~~~~~~~~~~~~~~~l~~~Gv~l~~~~~-----------~~~~~~G~~~~   74 (259)
                      ..+++.+.+++++++...+-.+.|+++.++++|||.+++||.++++.++|+.++..+.           .+..+.|...+
T Consensus       109 ~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~~~~~a~~~~~~~n~~~G~~av  188 (345)
T KOG2234|consen  109 QYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPSLSPTGAKSESSAQNPFLGLVAV  188 (345)
T ss_pred             HHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccCCCCCCccCCCcccchhhhHHHH
Confidence            3467889999999999999999999999999999999999999999999999976221           12356899999


Q ss_pred             HHHHHHHHHHHHHHHHHHhhcCCCHHHHHHhhhhHHHHHHHHHHHhhhhhccCcccccccCchhHHHHHHHHHHHHHHHH
Q 025040           75 CVAVLSTSLQQITIGSLQKKYSIGSFELLSKTAPIQAVSLLVLGPFVDYYLNGKFITTYKMTSGAILFIFLSCALAVFCN  154 (259)
Q Consensus        75 l~a~l~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (259)
                      +.+|++.++..++.+++.|+.+.+.+........+|.+..+......+.........-..|+...|..++..++.|...+
T Consensus       189 l~~c~~SgfAgvYfEkiLK~s~~s~wi~NiqL~~~g~~f~~l~~~~~d~~~i~~~gff~G~s~~vw~vVl~~a~gGLlvs  268 (345)
T KOG2234|consen  189 LVACFLSGFAGVYFEKILKGSNVSLWIRNIQLYFFGILFNLLTILLQDGEAINEYGFFYGYSSIVWLVVLLNAVGGLLVS  268 (345)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhhccccccccCCccccccHHHHHHHHHHhccchhHH
Confidence            99999999999999999998887777777666666666655554433321110111112466667777777777777665


Q ss_pred             HHHHHHhcccCceeeehhhhhhhHHHHhhhhhhcCCcccccchhhHHHHHHHHHHHHHHhh
Q 025040          155 VSQYLCIGRFSATSFQVLGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYSWAVE  215 (259)
Q Consensus       155 ~~~~~~l~~~~~~~~si~~~~~pv~~~~~s~~~~~e~~s~~~~~G~~lii~g~~~~~~~~~  215 (259)
                      +    .+|+.+....+....+..+++.+.|+.++|-++|....+|..+++.++.+|+..++
T Consensus       269 ~----v~KyADnIlK~f~~s~aiilt~v~S~~Lf~~~~t~~F~lG~~lVi~Si~lY~~~P~  325 (345)
T KOG2234|consen  269 L----VMKYADNILKGFSTSVAIILTTVASIALFDFQLTLYFLLGALLVILSIFLYSLYPA  325 (345)
T ss_pred             H----HHHHhHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHHHHHHHhhcCCc
Confidence            5    36888888888888889999999999999999999999999999999999984443

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=99.68  E-value=6.4e-16  Score=131.14  Aligned_cols=197  Identities=14%  Similarity=0.107  Sum_probs=148.0

Q ss_pred             eeeeeeecccchhHHHHHhh-hhHHHHHHHHHHHhccccChhh----hhhhhheeecceeeeecccc-------cc-hHH
Q 025040            4 AGMNFSLMLNSVGFYQISKL-SMIPVVCVMEWILHNKHYSKEV----KMAVVVVVIGVGVCTITDVK-------VN-AKG   70 (259)
Q Consensus         4 ~~~n~al~~~~~~~~~~l~~-~~p~~~~l~~~l~~~~~~~~~~----~~~~~l~~~Gv~l~~~~~~~-------~~-~~G   70 (259)
                      .+...++++++++.+..+.+ +.+++..+++.+++|||.++++    +++++++++|+++....+.+       .+ ..|
T Consensus        74 ~~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~~~~~~~~~~~~~~~~~~G  153 (290)
T TIGR00776        74 INQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTSRSKDKSAGIKSEFNFKKG  153 (290)
T ss_pred             hhHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEEeccccccccccccchhhH
Confidence            45667899999999988888 8888999999999999999999    99999999999998654321       33 689


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHhhhhHHHHHHHHHHHhhhhhccCcccccccCchhHHHHHHHHHHHH
Q 025040           71 FLCACVAVLSTSLQQITIGSLQKKYSIGSFELLSKTAPIQAVSLLVLGPFVDYYLNGKFITTYKMTSGAILFIFLSCALA  150 (259)
Q Consensus        71 ~~~~l~a~l~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (259)
                      ++++++++++|+.|.+..|+.    +.+|.+..+.+..--.+......+...   ..     .++.....+..+..|+..
T Consensus       154 i~~~l~sg~~y~~~~~~~~~~----~~~~~~~~~~~~~g~~~~~~~~~~~~~---~~-----~~~~~~~~~~~~~~Gi~~  221 (290)
T TIGR00776       154 ILLLLMSTIGYLVYVVVAKAF----GVDGLSVLLPQAIGMVIGGIIFNLGHI---LA-----KPLKKYAILLNILPGLMW  221 (290)
T ss_pred             HHHHHHHHHHHHHHHHHHHHc----CCCcceehhHHHHHHHHHHHHHHHHHh---cc-----cchHHHHHHHHHHHHHHH
Confidence            999999999999999999864    367777744443211111111111110   00     111222223334466665


Q ss_pred             HHHHHHHHHHhc-ccCceeeehhhhhhhHHHHhhhhhhcCCcccccch----hhHHHHHHHHHHHHH
Q 025040          151 VFCNVSQYLCIG-RFSATSFQVLGHMKTVCVLTLGWLLFDSALTFKNI----SGMILAVVGMVIYSW  212 (259)
Q Consensus       151 ~~~~~~~~~~l~-~~~~~~~si~~~~~pv~~~~~s~~~~~e~~s~~~~----~G~~lii~g~~~~~~  212 (259)
                      ...+..++...+ +.++.+.+++.+.+|+.+++++++++||+.+..|+    +|.++++.|+.+...
T Consensus       222 ~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~~~  288 (290)
T TIGR00776       222 GIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANILGI  288 (290)
T ss_pred             HHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHHhc
Confidence            555555556778 99999999999999999999999999999999999    999999999987543

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=99.67  E-value=2.8e-15  Score=122.60  Aligned_cols=198  Identities=12%  Similarity=0.047  Sum_probs=152.2

Q ss_pred             eecccchhHHHHHhhhhHHHHHHHHHHHhccccChhhhhhhhheeecceeeeecccccchHHHHHHHHHHHHHHHHHHHH
Q 025040            9 SLMLNSVGFYQISKLSMIPVVCVMEWILHNKHYSKEVKMAVVVVVIGVGVCTITDVKVNAKGFLCACVAVLSTSLQQITI   88 (259)
Q Consensus         9 al~~~~~~~~~~l~~~~p~~~~l~~~l~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~G~~~~l~a~l~~a~~~v~~   88 (259)
                      |.++-.+=.+++-++..|++.++++.+++|||+++.||+++.++.+||........+++|....++    ++|++|....
T Consensus        92 Avn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~~g~lpwval~la----~sf~~Ygl~R  167 (293)
T COG2962          92 AVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWLLGSLPWVALALA----LSFGLYGLLR  167 (293)
T ss_pred             ecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHH----HHHHHHHHHH
Confidence            333434456777788999999999999999999999999999999999998877778888776554    4899998776


Q ss_pred             HHHHhhcCCCHHHHHHhhhhHHHHHHHHHHHhhhhhccCcccccccCchhHHHHHHHHHHHHHHHHHHHHHHhcccCcee
Q 025040           89 GSLQKKYSIGSFELLSKTAPIQAVSLLVLGPFVDYYLNGKFITTYKMTSGAILFIFLSCALAVFCNVSQYLCIGRFSATS  168 (259)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  168 (259)
                      |+    .++|+.+-...+...-....+......+...+    .....+...+.+++..|..+.+.=......-++++=.+
T Consensus       168 K~----~~v~a~~g~~lE~l~l~p~al~yl~~l~~~~~----~~~~~~~~~~~LLv~aG~vTavpL~lf~~aa~~lpls~  239 (293)
T COG2962         168 KK----LKVDALTGLTLETLLLLPVALIYLLFLADSGQ----FLQQNANSLWLLLVLAGLVTAVPLLLFAAAAKRLPLST  239 (293)
T ss_pred             Hh----cCCchHHhHHHHHHHHhHHHHHHHHHHhcCch----hhhcCCchHHHHHHHhhHHHHHHHHHHHHHHhcCCHHH
Confidence            43    46788888777765544444444433332111    11123445556777777777665444445789999999


Q ss_pred             eehhhhhhhHHHHhhhhhhcCCcccccchhhHHHHHHHHHHHHHHhhHHH
Q 025040          169 FQVLGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYSWAVEAEK  218 (259)
Q Consensus       169 ~si~~~~~pv~~~~~s~~~~~e~~s~~~~~G~~lii~g~~~~~~~~~~~~  218 (259)
                      .++++|.+|....+++++++||+++..+....+.+..|..+|+...-+++
T Consensus       240 ~G~lqYi~Ptl~fllav~i~~E~~~~~~~~~F~~IW~aL~l~~~d~l~~~  289 (293)
T COG2962         240 LGFLQYIEPTLMFLLAVLIFGEPFDSDQLVTFAFIWLALALFSIDGLYTA  289 (293)
T ss_pred             HHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999998765443

>TIGR00688 rarD rarD protein

Probab=99.67  E-value=3.9e-16  Score=130.31  Aligned_cols=171  Identities=11%  Similarity=0.011  Sum_probs=119.6

Q ss_pred             eeeeeeecccchhHHHHHhhhhHHHHHHHHHHHhccccChhhhhhhhheeecceeeeecccccchHHHHHHHHHHHHHHH
Q 025040            4 AGMNFSLMLNSVGFYQISKLSMIPVVCVMEWILHNKHYSKEVKMAVVVVVIGVGVCTITDVKVNAKGFLCACVAVLSTSL   83 (259)
Q Consensus         4 ~~~n~al~~~~~~~~~~l~~~~p~~~~l~~~l~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~G~~~~l~a~l~~a~   83 (259)
                      .+.+.|+++++++.++++.++.|+|+++++++++|||++++++++++++++|++++..++.+.+    .+++++++||+.
T Consensus        85 ~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~~~~~~~~----~~~l~aa~~~a~  160 (256)
T TIGR00688        85 WLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNIVLKGSLP----WEALVLAFSFTA  160 (256)
T ss_pred             HHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHcCCch----HHHHHHHHHHHH
Confidence            3557799999999999999999999999999999999999999999999999998754332222    467889999999


Q ss_pred             HHHHHHHHHhhcCCCHHHHHHhhhhHHHHHHHHHHHhhhhhccCcccccccCchhHHHHHHHHHHHHHHHHHHHHHHhcc
Q 025040           84 QQITIGSLQKKYSIGSFELLSKTAPIQAVSLLVLGPFVDYYLNGKFITTYKMTSGAILFIFLSCALAVFCNVSQYLCIGR  163 (259)
Q Consensus        84 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  163 (259)
                      |.+..|+..++   +..+..... ........... .......   .... .....|..++..++++.+....+.+.+++
T Consensus       161 ~~i~~~~~~~~---~~~~~~~~~-~~~~~~~~~~~-~~~~~~~---~~~~-~~~~~~~~l~~~g~~t~i~~~l~~~a~~~  231 (256)
T TIGR00688       161 YGLIRKALKNT---DLAGFCLET-LSLMPVAIYYL-LQTDFAT---VQQT-NPFPIWLLLVLAGLITGTPLLAFVIAANR  231 (256)
T ss_pred             HHHHHhhcCCC---CcchHHHHH-HHHHHHHHHHH-HHhccCc---cccc-CchhHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence            99999886532   222222111 11111111111 1111100   0000 11123445555566666677777889999


Q ss_pred             cCceeeehhhhhhhHHHHhhhhhh
Q 025040          164 FSATSFQVLGHMKTVCVLTLGWLL  187 (259)
Q Consensus       164 ~~~~~~si~~~~~pv~~~~~s~~~  187 (259)
                      .++.+++...+++|+++.+++++.
T Consensus       232 ~~a~~~s~~~yl~Pv~~~~~~~~~  255 (256)
T TIGR00688       232 LPLNLLGLLQYIGPTIMMLCVSFL  255 (256)
T ss_pred             CChHHHHHHHHHHHHHHHHHHHHh
Confidence            999999999999999999999775

This uncharacterized protein is predicted to have many membrane-spanning domains.

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=99.65  E-value=3.8e-17  Score=131.24  Aligned_cols=201  Identities=13%  Similarity=0.119  Sum_probs=156.6

Q ss_pred             eeeeeeeecccchhHHHHHhhhhHHHHHHHHHHHhccccChhhhhhhhheeecceeeeeccc--------------ccch
Q 025040            3 IAGMNFSLMLNSVGFYQISKLSMIPVVCVMEWILHNKHYSKEVKMAVVVVVIGVGVCTITDV--------------KVNA   68 (259)
Q Consensus         3 ~~~~n~al~~~~~~~~~~l~~~~p~~~~l~~~l~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~--------------~~~~   68 (259)
                      +....+|++|++.+.+.++..+.|+|+.++++.++|||+++.+.++..+.+.|++++.-+..              +.+.
T Consensus       111 vmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPpFlFG~~t~g~~~s~~~~~~  190 (346)
T KOG4510|consen  111 VMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPPFLFGDTTEGEDSSQVEYDI  190 (346)
T ss_pred             HHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCCcccCCCccccccccccccC
Confidence            44567899999999999999999999999999999999999999999999999999864321              2345


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHhhhhHHHHHHHHHHHhhhhhccCcccccccCchhHHHHHHHHHH
Q 025040           69 KGFLCACVAVLSTSLQQITIGSLQKKYSIGSFELLSKTAPIQAVSLLVLGPFVDYYLNGKFITTYKMTSGAILFIFLSCA  148 (259)
Q Consensus        69 ~G~~~~l~a~l~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (259)
                      .|...++.+.+.-|.-.++.|++.|  +.|....+.|.+..+++..++......       ..+.+.....+++.+..|+
T Consensus       191 ~gt~aai~s~lf~asvyIilR~iGk--~~h~~msvsyf~~i~lV~s~I~~~~ig-------~~~lP~cgkdr~l~~~lGv  261 (346)
T KOG4510|consen  191 PGTVAAISSVLFGASVYIILRYIGK--NAHAIMSVSYFSLITLVVSLIGCASIG-------AVQLPHCGKDRWLFVNLGV  261 (346)
T ss_pred             CchHHHHHhHhhhhhHHHHHHHhhc--cccEEEEehHHHHHHHHHHHHHHhhcc-------ceecCccccceEEEEEehh
Confidence            6888888888888877888888766  345555555665555554444332221       1122233344567777888


Q ss_pred             HHHHHHHHHHHHhcccCceeeehhhhhhhHHHHhhhhhhcCCcccccchhhHHHHHHHHHHHHH
Q 025040          149 LAVFCNVSQYLCIGRFSATSFQVLGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYSW  212 (259)
Q Consensus       149 ~~~~~~~~~~~~l~~~~~~~~si~~~~~pv~~~~~s~~~~~e~~s~~~~~G~~lii~g~~~~~~  212 (259)
                      ++++.+......+++=.+-..++..+.+-+++.++-+++||+.++++.|.|+++++.+.++...
T Consensus       262 fgfigQIllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS~v~~a~  325 (346)
T KOG4510|consen  262 FGFIGQILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSSTVWVAL  325 (346)
T ss_pred             hhhHHHHHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeehhHHHHHH
Confidence            8999888877777776666678999999999999999999999999999999998888877543

>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.59  E-value=1.5e-15  Score=122.26  Aligned_cols=212  Identities=17%  Similarity=0.122  Sum_probs=176.1

Q ss_pred             ceeeeeeeecccchhHHHHHhhhhHHHHHHHHHHHhccccChhhhhhhhheeecceeeeeccc----ccchHHHHHHHHH
Q 025040            2 SIAGMNFSLMLNSVGFYQISKLSMIPVVCVMEWILHNKHYSKEVKMAVVVVVIGVGVCTITDV----KVNAKGFLCACVA   77 (259)
Q Consensus         2 ~~~~~n~al~~~~~~~~~~l~~~~p~~~~l~~~l~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~----~~~~~G~~~~l~a   77 (259)
                      +..++|-|+.|++.++..+.+++--+-+++.+.++.++|.....+.+..++.+|+++....|.    ++|..|+.++-.|
T Consensus       119 tmGLsn~SlgYLNYPtQviFKccKliPVmiggifIqGkRY~v~d~~aA~lm~lGli~FTLADs~~sPNF~~~Gv~mIsgA  198 (367)
T KOG1582|consen  119 TMGLSNGSLGYLNYPTQVIFKCCKLIPVMIGGIFIQGKRYGVHDYIAAMLMSLGLIWFTLADSQTSPNFNLIGVMMISGA  198 (367)
T ss_pred             ccccCcCccccccCcHHHHHHhhhhhhhhheeeeeccccccHHHHHHHHHHHHHHHhhhhcccccCCCcceeeHHHHHHH
Confidence            456889999999999999999999999999999999999999999999999999999876654    5788999999999


Q ss_pred             HHHHHHHHHHHHHHHhhcCCCHHHHHHhhhhHHHHHHHHHHHhhhhhccCcccccccCchhHHHHHHHHHHHHHHHHHHH
Q 025040           78 VLSTSLQQITIGSLQKKYSIGSFELLSKTAPIQAVSLLVLGPFVDYYLNGKFITTYKMTSGAILFIFLSCALAVFCNVSQ  157 (259)
Q Consensus        78 ~l~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (259)
                      -++.|+-...+++.++..+-+.-++.+|....|.+.++.........+..... -...+.......++.+..+++...+.
T Consensus       199 Ll~DA~iGNvQEk~m~~~~~ss~EmvfySy~iG~vflf~~mvlTge~f~a~~f-caehp~~tyGy~~~~s~~gylG~~~V  277 (367)
T KOG1582|consen  199 LLADAVIGNVQEKAMKMNPASSSEMVFYSYGIGFVFLFAPMVLTGELFSAWTF-CAEHPVRTYGYAFLFSLAGYLGIVFV  277 (367)
T ss_pred             HHHHHHhhHHHHHHHhhCCCCcceEEEeeecccHHHHHHHHHhcccchhhhHH-HHhCcHhHHHHHHHHHHHhHhhHHHH
Confidence            99999999999999988888888888888877877766555444332211110 01112224456667777788777777


Q ss_pred             HHHhcccCceeeehhhhhhhHHHHhhhhhhcCCcccccchhhHHHHHHHHHHHHHHh
Q 025040          158 YLCIGRFSATSFQVLGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYSWAV  214 (259)
Q Consensus       158 ~~~l~~~~~~~~si~~~~~pv~~~~~s~~~~~e~~s~~~~~G~~lii~g~~~~~~~~  214 (259)
                      ..+++..++..+..+++.+..+++++|+++|..|+|.+..-|..+++.|+++-.+.+
T Consensus       278 LalI~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~qy~~~gllv~lgI~Ln~ysk  334 (367)
T KOG1582|consen  278 LALIKLFGALIAATVTTARKAVTILLSFLLFSKPFTEQYVWSGLLVVLGIYLNMYSK  334 (367)
T ss_pred             HHHHHHhchhHHHHHHHhHhHHHHHHHHHHHcCchHHHHhhhhHHHHHHHHhhcccC
Confidence            778899999999999999999999999999999999999999999999999866544

>KOG2766 consensus Predicted membrane protein [Function unknown]

Probab=99.58  E-value=5.4e-15  Score=118.19  Aligned_cols=196  Identities=17%  Similarity=0.194  Sum_probs=156.3

Q ss_pred             eeecccchhHHHHHhhhhHHHHHHHHHHHhccccChhhhhhhhheeecceeeeeccc--------ccchHHHHHHHHHHH
Q 025040            8 FSLMLNSVGFYQISKLSMIPVVCVMEWILHNKHYSKEVKMAVVVVVIGVGVCTITDV--------KVNAKGFLCACVAVL   79 (259)
Q Consensus         8 ~al~~~~~~~~~~l~~~~p~~~~l~~~l~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~--------~~~~~G~~~~l~a~l   79 (259)
                      -|.||++....+++.+-..+.+++++|+++|.|.++.|+.|+++++.|++++...|.        +....|++++++++-
T Consensus        97 ~AyQyTsmtSi~lLDcwaip~v~~lsw~fLktrYrlmki~gV~iCi~GvvmvV~sDV~agd~aggsnp~~GD~lvi~GAT  176 (336)
T KOG2766|consen   97 KAYQYTSMTSIMLLDCWAIPCVLVLSWFFLKTRYRLMKISGVVICIVGVVMVVFSDVHAGDRAGGSNPVKGDFLVIAGAT  176 (336)
T ss_pred             eehhhcchHHHHHHHHhhhHHHHHHHHHHHHHHHhhheeeeEEeEecceEEEEEeeeccccccCCCCCccCcEEEEecce
Confidence            488999999999999999999999999999999999999999999999999887653        234589999999999


Q ss_pred             HHHHHHHHHHHHHhhcCCCHHHHHHhhhhHHHHHHHHHHHhhhhhccCcccccccCchhHHHHHHHHHHHHHHHHHHHHH
Q 025040           80 STSLQQITIGSLQKKYSIGSFELLSKTAPIQAVSLLVLGPFVDYYLNGKFITTYKMTSGAILFIFLSCALAVFCNVSQYL  159 (259)
Q Consensus        80 ~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (259)
                      +||+.++..+.+.|  +.|..+++....++|.+...+- +..+.    +......|+.....++. ...+-++.....-.
T Consensus       177 lYaVSNv~EEflvk--n~d~~elm~~lgLfGaIIsaIQ-~i~~~----~~~~tl~w~~~i~~yl~-f~L~MFllYsl~pi  248 (336)
T KOG2766|consen  177 LYAVSNVSEEFLVK--NADRVELMGFLGLFGAIISAIQ-FIFER----HHVSTLHWDSAIFLYLR-FALTMFLLYSLAPI  248 (336)
T ss_pred             eeeeccccHHHHHh--cCcHHHHHHHHHHHHHHHHHHH-Hhhhc----cceeeEeehHHHHHHHH-HHHHHHHHHHhhHH
Confidence            99999999999888  5688999999988888877766 33332    22333445433322222 33333333333345


Q ss_pred             HhcccCceeeehhhhhhhHHHHhhhhhhcCCcccccchhhHHHHHHHHHHHHHH
Q 025040          160 CIGRFSATSFQVLGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYSWA  213 (259)
Q Consensus       160 ~l~~~~~~~~si~~~~~pv~~~~~s~~~~~e~~s~~~~~G~~lii~g~~~~~~~  213 (259)
                      +++..+++..++.......++.+.  ..||-+.+|...+..+.+..|..+|..+
T Consensus       249 l~k~~~aT~~nlslLTsDmwsl~i--~~FgYhv~wLY~laF~~i~~GliiYs~r  300 (336)
T KOG2766|consen  249 LIKTNSATMFNLSLLTSDMWSLLI--RTFGYHVDWLYFLAFATIATGLIIYSTR  300 (336)
T ss_pred             heecCCceEEEhhHhHHHHHHHHH--HHHhcchhhhhHHHHHHHHHhhEEeecc
Confidence            678899999999999999999887  7788889999999999999999999543

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=99.44  E-value=4.6e-13  Score=107.17  Aligned_cols=190  Identities=12%  Similarity=0.079  Sum_probs=139.4

Q ss_pred             eeecccchhHHHHHhhhhHHHHHHHHHHHhccccChhhhhhhhheeecceeeeecc---cccchHHHHHHHHHHHHHHHH
Q 025040            8 FSLMLNSVGFYQISKLSMIPVVCVMEWILHNKHYSKEVKMAVVVVVIGVGVCTITD---VKVNAKGFLCACVAVLSTSLQ   84 (259)
Q Consensus         8 ~al~~~~~~~~~~l~~~~p~~~~l~~~l~~~~~~~~~~~~~~~l~~~Gv~l~~~~~---~~~~~~G~~~~l~a~l~~a~~   84 (259)
                      .|++.+|.+++..+-.+.|+.+.+++    .+|..  ..+-+.+++.|..++...+   .+.|+.|+.+++.++.||+.|
T Consensus        90 ~si~riPlGiAVAiEF~GPL~vA~~~----sRr~~--d~vwvaLAvlGi~lL~p~~~~~~~lDp~Gv~~Al~AG~~Wa~Y  163 (292)
T COG5006          90 LSIERIPLGIAVAIEFTGPLAVALLS----SRRLR--DFVWVALAVLGIWLLLPLGQSVWSLDPVGVALALGAGACWALY  163 (292)
T ss_pred             HHHHhccchhhhhhhhccHHHHHHHh----ccchh--hHHHHHHHHHHHHhheeccCCcCcCCHHHHHHHHHHhHHHHHH
Confidence            47888999999999999999877665    34443  4444555667777765433   457899999999999999999


Q ss_pred             HHHHHHHHhhcCCCHHHHHHhhhhHHHHHHHHHHHhhhhhccCcccccccCchhHHHHHHHHHHHHHHHHHHH-HHHhcc
Q 025040           85 QITIGSLQKKYSIGSFELLSKTAPIQAVSLLVLGPFVDYYLNGKFITTYKMTSGAILFIFLSCALAVFCNVSQ-YLCIGR  163 (259)
Q Consensus        85 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~  163 (259)
                      .+..||.-+  ..+-.+-....+..+.+..+++.....        ...-+++......+..++++....|+. ..++++
T Consensus       164 Iv~G~r~g~--~~~g~~g~a~gm~vAaviv~Pig~~~a--------g~~l~~p~ll~laLgvavlSSalPYsLEmiAL~r  233 (292)
T COG5006         164 IVLGQRAGR--AEHGTAGVAVGMLVAALIVLPIGAAQA--------GPALFSPSLLPLALGVAVLSSALPYSLEMIALRR  233 (292)
T ss_pred             HHHcchhcc--cCCCchHHHHHHHHHHHHHhhhhhhhc--------chhhcChHHHHHHHHHHHHhcccchHHHHHHHhh
Confidence            999998764  234444455555555555555433211        112344455555555666665554443 457999


Q ss_pred             cCceeeehhhhhhhHHHHhhhhhhcCCcccccchhhHHHHHHHHHHHHHH
Q 025040          164 FSATSFQVLGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYSWA  213 (259)
Q Consensus       164 ~~~~~~si~~~~~pv~~~~~s~~~~~e~~s~~~~~G~~lii~g~~~~~~~  213 (259)
                      .++-+.+++..+||.++.+.|++++||.+|..||+|++.++.+..-.++.
T Consensus       234 lp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsaG~~lt  283 (292)
T COG5006         234 LPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASAGSTLT  283 (292)
T ss_pred             CChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhccccc
Confidence            99999999999999999999999999999999999999999998866554

>TIGR00803 nst UDP-galactose transporter

Probab=99.39  E-value=4.2e-13  Score=109.69  Aligned_cols=193  Identities=13%  Similarity=0.072  Sum_probs=131.1

Q ss_pred             cchhHHHHHhhhhHHHHHHHHHHHhccccChhhhhhhhheeecceeeeec--------------------cc-------c
Q 025040           13 NSVGFYQISKLSMIPVVCVMEWILHNKHYSKEVKMAVVVVVIGVGVCTIT--------------------DV-------K   65 (259)
Q Consensus        13 ~~~~~~~~l~~~~p~~~~l~~~l~~~~~~~~~~~~~~~l~~~Gv~l~~~~--------------------~~-------~   65 (259)
                      +++|.....++..++++++.++.+.++|.+..|+++..+...|+......                    +.       +
T Consensus         2 isvPa~~~~~s~~l~~v~l~~~~~~~~~~~~~~i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~~~~~~~~~g   81 (222)
T TIGR00803         2 LSVPIHIIFKQNNLVLIALGNLLAAGKQVTQLKILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQSSAKTLMFG   81 (222)
T ss_pred             ccccchHHHHhcchHHHHHhcccccceeeehHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCCCCccccccc
Confidence            57788899999999999999999999999999999999999998742111                    11       2


Q ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHhhhhHHHHHHHHHHHhhhh-hccCcccccccCchhHHHHHH
Q 025040           66 VNAKGFLCACVAVLSTSLQQITIGSLQKKYSIGSFELLSKTAPIQAVSLLVLGPFVDY-YLNGKFITTYKMTSGAILFIF  144 (259)
Q Consensus        66 ~~~~G~~~~l~a~l~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  144 (259)
                      ..+.|..+.+.++++.++..++.++..|+++...+.-......++.+.... ...... ........-..++...+..++
T Consensus        82 ~~~~g~~~~l~a~~~~~~~~~y~e~~~k~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (222)
T TIGR00803        82 NPVVGLSAVLSALLSSGFAGVYFEKILKDGDTMFWSRNLQLPLFGLFSTFS-VLLWSDGTLISNFGFFIGYPTAVWIVGL  160 (222)
T ss_pred             cHHHHHHHHHHHHHHHhhhHHHHHHcccCCCCchHHHHHHHHHHHHHHHHH-HHhhcccchhhccCcccCCchHHHHHHH
Confidence            345788888888888899999999877654443332222222222221111 111110 000000001122333333333


Q ss_pred             HHHHHHHHHHHHHHHHhcccCceeeehhhhhhhHHHHhhhhhhcCCcccccchhhHHHHHHHHHHH
Q 025040          145 LSCALAVFCNVSQYLCIGRFSATSFQVLGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIY  210 (259)
Q Consensus       145 ~~~~~~~~~~~~~~~~l~~~~~~~~si~~~~~pv~~~~~s~~~~~e~~s~~~~~G~~lii~g~~~~  210 (259)
                      .    ......+..+.+++.++...++...++++++.++|+++|||+++..+++|..+++.|+.+|
T Consensus       161 ~----~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~lY  222 (222)
T TIGR00803       161 L----NVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFLY  222 (222)
T ss_pred             H----HHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEeC
Confidence            3    3333334556799999999999999999999999999999999999999999999998765

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>COG2510 Predicted membrane protein [Function unknown]

Probab=99.34  E-value=2.2e-11  Score=87.62  Aligned_cols=133  Identities=15%  Similarity=0.171  Sum_probs=107.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHhhhhHHHHHHHHHHHhhhhhccCcccccccCchhHHHHHHHHHHHH
Q 025040           71 FLCACVAVLSTSLQQITIGSLQKKYSIGSFELLSKTAPIQAVSLLVLGPFVDYYLNGKFITTYKMTSGAILFIFLSCALA  150 (259)
Q Consensus        71 ~~~~l~a~l~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (259)
                      .++++++++++++..++.|.-.+  ++||-......+......+.........     .......+...|.+++++|+.+
T Consensus         5 ~~~ALLsA~fa~L~~iF~KIGl~--~vdp~~At~IRtiVi~~~l~~v~~~~g~-----~~~~~~~~~k~~lflilSGla~   77 (140)
T COG2510           5 IIYALLSALFAGLTPIFAKIGLE--GVDPDFATTIRTIVILIFLLIVLLVTGN-----WQAGGEIGPKSWLFLILSGLAG   77 (140)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcc--ccCccHHHHHHHHHHHHHHHHHHHhcCc-----eecccccCcceehhhhHHHHHH
Confidence            57899999999999999988666  5677666666665555555555444332     1112224556668999999999


Q ss_pred             HHHHHHHHHHhcccCceeeehhhhhhhHHHHhhhhhhcCCcccccchhhHHHHHHHHHHH
Q 025040          151 VFCNVSQYLCIGRFSATSFQVLGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIY  210 (259)
Q Consensus       151 ~~~~~~~~~~l~~~~~~~~si~~~~~pv~~~~~s~~~~~e~~s~~~~~G~~lii~g~~~~  210 (259)
                      ....+++|.+++.-.+..+..+.-+.|+++.++|+++++|+++..+|+|.+++.+|.++.
T Consensus        78 glswl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailv  137 (140)
T COG2510          78 GLSWLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILV  137 (140)
T ss_pred             HHHHHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeE
Confidence            889999999999999999999999999999999999999999999999999999998764

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=99.22  E-value=5.2e-11  Score=87.89  Aligned_cols=124  Identities=21%  Similarity=0.349  Sum_probs=95.8

Q ss_pred             HHHHHHHHHHHHHHhhcCCCHHHHHHhhhhHHHHHHHHHHHhhhhhccCcccccccCchhHHHHHHHHHHH-HHHHHHHH
Q 025040           79 LSTSLQQITIGSLQKKYSIGSFELLSKTAPIQAVSLLVLGPFVDYYLNGKFITTYKMTSGAILFIFLSCAL-AVFCNVSQ  157 (259)
Q Consensus        79 l~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~  157 (259)
                      ++||.+.++.|+..++  .|+.....+....+.+ +++.....+...      ....+...+......+.. ....+...
T Consensus         1 ~~~a~~~~~~k~~~~~--~~~~~~~~~~~~~~~~-~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~   71 (126)
T PF00892_consen    1 FSWAIYSVFSKKLLKK--ISPLSITFWRFLIAGI-LLILLLILGRKP------FKNLSPRQWLWLLFLGLLGTALAYLLY   71 (126)
T ss_pred             ceeeeHHHHHHHHhcc--CCHHHHHHHHHHHHHH-HHHHHHhhcccc------ccCCChhhhhhhhHhhccceehHHHHH
Confidence            4688999999998774  7999999999888876 555554443211      122333333344444444 46666777


Q ss_pred             HHHhcccCceeeehhhhhhhHHHHhhhhhhcCCcccccchhhHHHHHHHHHHHH
Q 025040          158 YLCIGRFSATSFQVLGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYS  211 (259)
Q Consensus       158 ~~~l~~~~~~~~si~~~~~pv~~~~~s~~~~~e~~s~~~~~G~~lii~g~~~~~  211 (259)
                      ++.+++.++...+...+++|+++.++++++++|+++..+++|+++++.|+++..
T Consensus        72 ~~a~~~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~  125 (126)
T PF00892_consen   72 FYALKYISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS  125 (126)
T ss_pred             HHHHHhcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence            789999999999999999999999999999999999999999999999998754

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]

Probab=99.04  E-value=2.1e-09  Score=83.33  Aligned_cols=201  Identities=9%  Similarity=0.081  Sum_probs=140.5

Q ss_pred             eeecccchhHHHHHhhhhHHHHHHHHHHHhccccChhhhhhhhheeecceeeeecccc--cchHHHHHHHHHHHHHHHHH
Q 025040            8 FSLMLNSVGFYQISKLSMIPVVCVMEWILHNKHYSKEVKMAVVVVVIGVGVCTITDVK--VNAKGFLCACVAVLSTSLQQ   85 (259)
Q Consensus         8 ~al~~~~~~~~~~l~~~~p~~~~l~~~l~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~~--~~~~G~~~~l~a~l~~a~~~   85 (259)
                      .+++.++++.++.+.++.--|+.+++++.+|+|+...++++.++++.|++++.+.|..  .++.|+.+++.++...|+|.
T Consensus        72 ~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN~~a~e~iGi~~AV~SA~~aAlYK  151 (290)
T KOG4314|consen   72 LALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADNEHADEIIGIACAVGSAFMAALYK  151 (290)
T ss_pred             HHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccchhhhhhhhHHHHHHHHHHHHHHH
Confidence            4788899999999999999999999999999999999999999999999999987754  57899999999999999999


Q ss_pred             HHHHHHHhhcCCCHHHHHHhhhhHHHHHHHHHH-HhhhhhccCc-ccccccCchhHHHHHHHHHHHHHHHHHHHHHHhcc
Q 025040           86 ITIGSLQKKYSIGSFELLSKTAPIQAVSLLVLG-PFVDYYLNGK-FITTYKMTSGAILFIFLSCALAVFCNVSQYLCIGR  163 (259)
Q Consensus        86 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  163 (259)
                      +..|+...+.+.  -+...+++..|.+=+.+.. |...-.+++. .+.++..  ..|..+..........|+....-+..
T Consensus       152 V~FK~~iGnAn~--Gdaa~FmS~LGF~NL~~~~~~~lIL~~T~VE~~qsFA~--~PWG~l~G~A~L~lAFN~~iN~GiaL  227 (290)
T KOG4314|consen  152 VLFKMFIGNANF--GDAAHFMSCLGFFNLCFISFPALILAFTGVEHLQSFAA--APWGCLCGAAGLSLAFNFLINFGIAL  227 (290)
T ss_pred             HHHHHHhccCcc--hhHHHHHHHHHHHHHHHHhhhHHHHHHhchHHHHHHhh--CCchhhhhHHHHHHHHhhheeehhhh
Confidence            999998875444  3344455555555443332 1111111111 1111111  12233333333444455544444566


Q ss_pred             cCceeeehhhhhhhHHHHhhhhhhcCCcccccchhhHHHHHHHHHHHHH
Q 025040          164 FSATSFQVLGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYSW  212 (259)
Q Consensus       164 ~~~~~~si~~~~~pv~~~~~s~~~~~e~~s~~~~~G~~lii~g~~~~~~  212 (259)
                      +.|...|+-.......-.....++=+-..+.....|.+++.+|..+.-.
T Consensus       228 ~~PilISiG~l~~iP~NaaiDiL~q~l~~ntl~La~T~iI~i~FiLiii  276 (290)
T KOG4314|consen  228 LNPILISIGMLCGIPGNAAIDILFQELEFNTLFLAATCIICIGFILIII  276 (290)
T ss_pred             hchhhheehheecCcchhHHHHHHHHHHHHHHHHHHHHHHHHhHHheec
Confidence            6777777666655555556665554457899999999999999887644

>TIGR00688 rarD rarD protein

Probab=98.98  E-value=7.1e-09  Score=86.55  Aligned_cols=137  Identities=15%  Similarity=0.161  Sum_probs=103.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHhhhhHHHHHHHHHHHhhhhhccCccccccc-C-chhHHHHHHHH
Q 025040           69 KGFLCACVAVLSTSLQQITIGSLQKKYSIGSFELLSKTAPIQAVSLLVLGPFVDYYLNGKFITTYK-M-TSGAILFIFLS  146 (259)
Q Consensus        69 ~G~~~~l~a~l~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~  146 (259)
                      .|..+.++++++|+...+..|.. .  +.+|.++.++...++.+.+.+......... . ...... . ....+......
T Consensus         2 ~g~~~~i~a~~~wg~~~~~~k~~-~--~~~~~~i~~~R~~~a~~~l~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~   76 (256)
T TIGR00688         2 KGIIVSLLASFLFGYMYYYSKLL-K--PLPATDILGHRMIWSFPFMLLSVTLFRQWA-A-LIERLKRIQKRPLILSLLLC   76 (256)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHh-c--cCCHHHHHHHHHHHHHHHHHHHHHHHcchH-H-HHHHHhCcccchHHHHHHHH
Confidence            48899999999999999999863 3  489999999998887766655443321100 0 000111 1 11223345566


Q ss_pred             HHHHHHHHHHHHHHhcccCceeeehhhhhhhHHHHhhhhhhcCCcccccchhhHHHHHHHHHHH
Q 025040          147 CALAVFCNVSQYLCIGRFSATSFQVLGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIY  210 (259)
Q Consensus       147 ~~~~~~~~~~~~~~l~~~~~~~~si~~~~~pv~~~~~s~~~~~e~~s~~~~~G~~lii~g~~~~  210 (259)
                      ++.......+.++.++++++..++++.++.|+++.++++++++|+++..+++|.++.++|+.+.
T Consensus        77 g~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li  140 (256)
T TIGR00688        77 GLLIGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISN  140 (256)
T ss_pred             HHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHH
Confidence            6666667777788999999999999999999999999999999999999999999999998765

This uncharacterized protein is predicted to have many membrane-spanning domains.

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=98.91  E-value=2.6e-08  Score=84.99  Aligned_cols=140  Identities=14%  Similarity=0.144  Sum_probs=104.4

Q ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHhhhhHHHHHHHHHHHhhhhhccCcccccccCchhHHHHHHH
Q 025040           66 VNAKGFLCACVAVLSTSLQQITIGSLQKKYSIGSFELLSKTAPIQAVSLLVLGPFVDYYLNGKFITTYKMTSGAILFIFL  145 (259)
Q Consensus        66 ~~~~G~~~~l~a~l~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  145 (259)
                      ....|.++.++++++|+...+..|.. .  +.+|.++..+...++.+.+++........ .  .......+...+...+.
T Consensus         5 ~~~~g~~~~l~a~~~wg~~~~~~k~~-~--~~~~~~~~~~R~~~a~~~l~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~   78 (296)
T PRK15430          5 QTRQGVLLALAAYFIWGIAPAYFKLI-Y--YVPADEILTHRVIWSFFFMVVLMSICRQW-S--YLKTLIQTPQKIFMLAV   78 (296)
T ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHh-c--CCCHHHHHHHHHHHHHHHHHHHHHHHccH-H--HHHHHHcCHHHHHHHHH
Confidence            34579999999999999999999753 2  58999999999888776665443221110 0  00000012222223344


Q ss_pred             HHHHHHHHHHHHHHHhcccCceeeehhhhhhhHHHHhhhhhhcCCcccccchhhHHHHHHHHHHHH
Q 025040          146 SCALAVFCNVSQYLCIGRFSATSFQVLGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYS  211 (259)
Q Consensus       146 ~~~~~~~~~~~~~~~l~~~~~~~~si~~~~~pv~~~~~s~~~~~e~~s~~~~~G~~lii~g~~~~~  211 (259)
                      .++.....+.+.++.++++++..++++.++.|+++.++++++++|+++..+++|+++.++|+++..
T Consensus        79 ~~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~  144 (296)
T PRK15430         79 SAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQL  144 (296)
T ss_pred             HHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHH
Confidence            555555567778889999999999999999999999999999999999999999999999988754

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=98.84  E-value=6.7e-08  Score=81.81  Aligned_cols=132  Identities=12%  Similarity=0.067  Sum_probs=93.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHhhhhHHHHHHHHHHHhhhhhccCcccccccCchhHHHHHHHHHHHH
Q 025040           71 FLCACVAVLSTSLQQITIGSLQKKYSIGSFELLSKTAPIQAVSLLVLGPFVDYYLNGKFITTYKMTSGAILFIFLSCALA  150 (259)
Q Consensus        71 ~~~~l~a~l~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (259)
                      ..+.+++++++|...++.|+..++  .++.  ..+....+.+.+.+......   ....+..  .....+..++..++..
T Consensus         3 ~~~~~~aa~~~a~~~~~~k~~~~~--~~~~--~~~~~~~~~~~l~~~~~~~~---~~~~~~~--~~~~~~~~~~~~~~~~   73 (281)
T TIGR03340         3 LTLVVFSALMHAGWNLMAKSHADK--EPDF--LWWALLAHSVLLTPYGLWYL---AQVGWSR--LPATFWLLLAISAVAN   73 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCCc--hhHH--HHHHHHHHHHHHHHHHHHhc---ccCCCCC--cchhhHHHHHHHHHHH
Confidence            467899999999999999976553  2333  23333333333333222110   0011111  1122334556666667


Q ss_pred             HHHHHHHHHHhcccCceeeehhhhhhhHHHHhhhhhhcCCcccccchhhHHHHHHHHHHHH
Q 025040          151 VFCNVSQYLCIGRFSATSFQVLGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYS  211 (259)
Q Consensus       151 ~~~~~~~~~~l~~~~~~~~si~~~~~pv~~~~~s~~~~~e~~s~~~~~G~~lii~g~~~~~  211 (259)
                      .....+.+..+++.++...+.+.+..|+++.++++++++|+++..+++|.++++.|+++..
T Consensus        74 ~~~~~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~  134 (281)
T TIGR03340        74 MVYFLGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLG  134 (281)
T ss_pred             HHHHHHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHh
Confidence            7777778889999999999999999999999999999999999999999999999998764

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=98.73  E-value=2.3e-07  Score=80.98  Aligned_cols=138  Identities=12%  Similarity=0.141  Sum_probs=105.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHhhhhHHHHHHHHHHHhhhhhccCcccccccCchhHHHHHHHHHH
Q 025040           69 KGFLCACVAVLSTSLQQITIGSLQKKYSIGSFELLSKTAPIQAVSLLVLGPFVDYYLNGKFITTYKMTSGAILFIFLSCA  148 (259)
Q Consensus        69 ~G~~~~l~a~l~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (259)
                      .-+..+++..++|+.+.++.|...+ .+++|....++...++.+.+++++...+..   ....  ..+...+..+.+.++
T Consensus        13 ~~~~~~~~~q~~~~~~~~~~k~a~~-~G~~~~~~~~~R~~iA~l~Ll~~~~~~~~~---~~~~--~~~~~~~~~l~l~g~   86 (358)
T PLN00411         13 VFLTAMLATETSVVGISTLFKVATS-KGLNIYPFLGYSYLLASLLLLPSLFFTNRS---RSLP--PLSVSILSKIGLLGF   86 (358)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHH-CCCCccHHHHHHHHHHHHHHHHHHHHHHHh---cccC--cchHHHHHHHHHHHH
Confidence            4567788889999999999998875 489999999999888777776665433211   0001  111223345555666


Q ss_pred             HHHHHHHHHHHHhcccCceeeehhhhhhhHHHHhhhhhh------cCCcccccchhhHHHHHHHHHHHHH
Q 025040          149 LAVFCNVSQYLCIGRFSATSFQVLGHMKTVCVLTLGWLL------FDSALTFKNISGMILAVVGMVIYSW  212 (259)
Q Consensus       149 ~~~~~~~~~~~~l~~~~~~~~si~~~~~pv~~~~~s~~~------~~e~~s~~~~~G~~lii~g~~~~~~  212 (259)
                      ++...+...+..++++++..++++.++.|+++.++++++      ++|+++..+++|.++.++|+.+...
T Consensus        87 ~g~~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~  156 (358)
T PLN00411         87 LGSMYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIF  156 (358)
T ss_pred             HHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHH
Confidence            665555567778999999999999999999999999999      6999999999999999999987553

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=98.63  E-value=7.7e-07  Score=73.71  Aligned_cols=187  Identities=15%  Similarity=0.180  Sum_probs=129.5

Q ss_pred             eecccchhHHHHH-hhhhHHHHHHHHHHHhccccChhhhh----hhhheeecceeeeeccccc--------chHHHHHHH
Q 025040            9 SLMLNSVGFYQIS-KLSMIPVVCVMEWILHNKHYSKEVKM----AVVVVVIGVGVCTITDVKV--------NAKGFLCAC   75 (259)
Q Consensus         9 al~~~~~~~~~~l-~~~~p~~~~l~~~l~~~~~~~~~~~~----~~~l~~~Gv~l~~~~~~~~--------~~~G~~~~l   75 (259)
                      |++++.+|.+-=+ ....-+.+.++++++++|-.+..+++    ++++.++|+.+.+..|.+.        ...|+...+
T Consensus        65 s~~~~GVS~tmPiStg~QLvg~sl~gv~~fgEW~~~~~~~~G~~Al~liiiGv~lts~~~~~~~~~~~~~~~~kgi~~Ll  144 (269)
T PF06800_consen   65 SFKKIGVSKTMPISTGLQLVGTSLIGVLFFGEWTTTTQKIIGFLALVLIIIGVILTSYQDKKSDKSSSKSNMKKGILALL  144 (269)
T ss_pred             HHHHhcceeeeccchhHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHhccccccccccccccchhhHHHHHH
Confidence            4444444433222 24667789999999999988877765    8888899999987655321        246999999


Q ss_pred             HHHHHHHHHHHHHHHHHhhcCCCHHHHHHhhhhHHHHHHHHHHHhhhhhccCcccccccCchhHHHHHHHHHHHHHHHHH
Q 025040           76 VAVLSTSLQQITIGSLQKKYSIGSFELLSKTAPIQAVSLLVLGPFVDYYLNGKFITTYKMTSGAILFIFLSCALAVFCNV  155 (259)
Q Consensus        76 ~a~l~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (259)
                      ++.+.|..|.+..|.    .+.++++...-++.-..+....+..+.    .....+      ...+.-+..|+.=...|.
T Consensus       145 ~stigy~~Y~~~~~~----~~~~~~~~~lPqaiGm~i~a~i~~~~~----~~~~~~------k~~~~nil~G~~w~ignl  210 (269)
T PF06800_consen  145 ISTIGYWIYSVIPKA----FHVSGWSAFLPQAIGMLIGAFIFNLFS----KKPFFE------KKSWKNILTGLIWGIGNL  210 (269)
T ss_pred             HHHHHHHHHHHHHHh----cCCChhHhHHHHHHHHHHHHHHHhhcc----cccccc------cchHHhhHHHHHHHHHHH
Confidence            999999999999865    367888887766433222222222111    111111      111344566666666777


Q ss_pred             HHHHHhcccCceeeehhhhhhhHHHHhhhhhhcCCccccc----chhhHHHHHHHHHH
Q 025040          156 SQYLCIGRFSATSFQVLGHMKTVCVLTLGWLLFDSALTFK----NISGMILAVVGMVI  209 (259)
Q Consensus       156 ~~~~~l~~~~~~~~si~~~~~pv~~~~~s~~~~~e~~s~~----~~~G~~lii~g~~~  209 (259)
                      +++...++.+....=.++-+..+++.+.|.++++|+-+..    .++|.++++.|.++
T Consensus       211 ~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~~G~~Liv~G~il  268 (269)
T PF06800_consen  211 FYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTLIGLILIVIGAIL  268 (269)
T ss_pred             HHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHHHHHHHHHHhhhc
Confidence            7777888999999999999999999999999999998755    45688888877654

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=98.42  E-value=3.3e-08  Score=71.97  Aligned_cols=61  Identities=13%  Similarity=0.240  Sum_probs=55.8

Q ss_pred             eeeeeeecccchhHHHHHhhhhHHHHHHHHHHHhccccChhhhhhhhheeecceeeeecccc
Q 025040            4 AGMNFSLMLNSVGFYQISKLSMIPVVCVMEWILHNKHYSKEVKMAVVVVVIGVGVCTITDVK   65 (259)
Q Consensus         4 ~~~n~al~~~~~~~~~~l~~~~p~~~~l~~~l~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~~   65 (259)
                      .+.+.|+++.+ +....+.++.|+|+++++++++|||++++++.++.++++|++++..+|.+
T Consensus        50 ~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~~~~er~~~~~~~a~~l~~~Gv~li~~~~~~  110 (113)
T PF13536_consen   50 LLFFYALSYAP-ALVAAIFSLSPIFTALLSWLFFKERLSPRRWLAILLILIGVILIAWSDLT  110 (113)
T ss_pred             HHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhhcc
Confidence            45677899999 58889999999999999999999999999999999999999999877764

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=98.40  E-value=7e-07  Score=76.00  Aligned_cols=199  Identities=11%  Similarity=0.137  Sum_probs=113.1

Q ss_pred             eeeeeeecccchhHHHHHhhhhHHHHHHHHHHHhccccChhhhhhhhheeecceeeeecc-cc---cch---------HH
Q 025040            4 AGMNFSLMLNSVGFYQISKLSMIPVVCVMEWILHNKHYSKEVKMAVVVVVIGVGVCTITD-VK---VNA---------KG   70 (259)
Q Consensus         4 ~~~n~al~~~~~~~~~~l~~~~p~~~~l~~~l~~~~~~~~~~~~~~~l~~~Gv~l~~~~~-~~---~~~---------~G   70 (259)
                      +++..|+.+.|.+..+=+.++.-++.++++..++|||++++.+.|..+++.|..++.... .+   .+.         .+
T Consensus        65 ~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~~~~~~~~~~t~~~l~~~~~~~~  144 (300)
T PF05653_consen   65 ILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVIFAPKEEPIHTLDELIALLSQPG  144 (300)
T ss_pred             HHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEEeCCCCCCcCCHHHHHHHhcCcc
Confidence            456678999999999999999999999999999999999999999999999998865321 11   110         11


Q ss_pred             ---HHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHhhhhHH---HHHHHH---HHHhhhhhccCcccccccCchhHHH
Q 025040           71 ---FLCACVAVLSTSLQQITIGSLQKKYSIGSFELLSKTAPIQ---AVSLLV---LGPFVDYYLNGKFITTYKMTSGAIL  141 (259)
Q Consensus        71 ---~~~~l~a~l~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~  141 (259)
                         +...... ++..+.....+|..++ +     +..+....+   ....+.   ..........++.   .-..+..|.
T Consensus       145 fl~y~~~~~~-~~~~L~~~~~~r~g~~-~-----i~vyi~i~sl~Gs~tvl~~K~i~~~i~~~~~g~~---~f~~~~~y~  214 (300)
T PF05653_consen  145 FLVYFILVLV-LILILIFFIKPRYGRR-N-----ILVYISICSLIGSFTVLSAKAISILIKLTFSGDN---QFTYPLTYL  214 (300)
T ss_pred             eehhHHHHHH-HHHHHHHhhcchhccc-c-----eEEEEEEeccccchhhhHHHHHHHHHHHHhcCch---hhhhhHHHH
Confidence               1111111 1111222122221111 1     122222212   111111   0111111111111   111223333


Q ss_pred             HHHHHHHHHHHHHHHHHHHhcccCceeeehhh-hhhhHHHHhhhhhhcCCc--ccc----cchhhHHHHHHHHHHHHH
Q 025040          142 FIFLSCALAVFCNVSQYLCIGRFSATSFQVLG-HMKTVCVLTLGWLLFDSA--LTF----KNISGMILAVVGMVIYSW  212 (259)
Q Consensus       142 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~si~~-~~~pv~~~~~s~~~~~e~--~s~----~~~~G~~lii~g~~~~~~  212 (259)
                      +++....+....-.....++++.++.....+. ..-...+++-|.++|+|-  ++.    ....|..+++.|+.+-+.
T Consensus       215 l~~~~v~~~~~Q~~~LN~aL~~fd~~~V~P~~~v~~t~~~i~~g~i~f~e~~~~~~~~~~~~~~G~~~ii~GV~lL~~  292 (300)
T PF05653_consen  215 LLLVLVVTAVLQLYYLNKALKRFDTSLVVPVYYVFFTLSSIIGGAIFFQEFSRMTAWQIIGFLCGFLIIIIGVFLLSS  292 (300)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhccceEEEeehhHHHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHHHhhheeec
Confidence            44444444555555566688888887766555 445567788888899984  555    445677888888888643

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=98.35  E-value=8.6e-06  Score=67.39  Aligned_cols=141  Identities=17%  Similarity=0.157  Sum_probs=108.5

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHhhhhHHHHHHHHHHHhhhhhccCcccccccCchhHHHHHHHH
Q 025040           67 NAKGFLCACVAVLSTSLQQITIGSLQKKYSIGSFELLSKTAPIQAVSLLVLGPFVDYYLNGKFITTYKMTSGAILFIFLS  146 (259)
Q Consensus        67 ~~~G~~~~l~a~l~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  146 (259)
                      +..|+++++.+.+.|+....+.|-+.   +.++.++..+...++...++....+.....   ...+..-++..+..+...
T Consensus         5 ~~~Gil~~l~Ay~lwG~lp~y~kll~---~~~~~eIlahRviwS~~~~l~ll~~~r~~~---~~~~~~~~p~~~~~~~l~   78 (293)
T COG2962           5 SRKGILLALLAYLLWGLLPLYFKLLE---PLPATEILAHRVIWSFPFMLALLFLLRQWR---ELKQLLKQPKTLLMLALT   78 (293)
T ss_pred             ccchhHHHHHHHHHHHHHHHHHHHHc---cCCHHHHHHHHHHHHHHHHHHHHHHHhhhH---HHHHHHhCcHHHHHHHHH
Confidence            34699999999999999999988654   578999999999888887776655543211   111122234445555556


Q ss_pred             HHHHHHHHHHHHHHhcccCceeeehhhhhhhHHHHhhhhhhcCCcccccchhhHHHHHHHHHHHHHH
Q 025040          147 CALAVFCNVSQYLCIGRFSATSFQVLGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYSWA  213 (259)
Q Consensus       147 ~~~~~~~~~~~~~~l~~~~~~~~si~~~~~pv~~~~~s~~~~~e~~s~~~~~G~~lii~g~~~~~~~  213 (259)
                      +..-........|+..+-....+|.-.+++|.+.+++|.++++|+++..|++..++..+|+..-.+.
T Consensus        79 a~li~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~  145 (293)
T COG2962          79 ALLIGLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWL  145 (293)
T ss_pred             HHHHHHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHH
Confidence            6555555555557888889999999999999999999999999999999999999999999876544

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=98.35  E-value=6.7e-06  Score=61.04  Aligned_cols=118  Identities=14%  Similarity=0.139  Sum_probs=77.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHhhhhHHHHHHHHHHHhhhhhccCcccccccCchhHHHHHHHHHH
Q 025040           69 KGFLCACVAVLSTSLQQITIGSLQKKYSIGSFELLSKTAPIQAVSLLVLGPFVDYYLNGKFITTYKMTSGAILFIFLSCA  148 (259)
Q Consensus        69 ~G~~~~l~a~l~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (259)
                      .|+++++.+.++.+...++.|+-.++.+.  .+....     ....+..  .              .++.   ..+..++
T Consensus         2 ~~~~~i~~sv~l~~~gQl~~K~g~~~~g~--~~~~~~-----~~~~~~~--~--------------~~p~---~~i~lgl   55 (129)
T PRK02971          2 MGYLWGLASVLLASVAQLSLKWGMSRLPL--LSHAWD-----FIAALLA--F--------------GLAL---RAVLLGL   55 (129)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHhhCCC--ccchhH-----HHHHHHH--H--------------hccH---HHHHHHH
Confidence            47889999999999999999876654322  111100     0000000  0              0110   1122233


Q ss_pred             HHHH-HHHHHHHHhcccCceeeehhhhhhhHHHHhhhhh--hcCCcccccchhhHHHHHHHHHHHHH
Q 025040          149 LAVF-CNVSQYLCIGRFSATSFQVLGHMKTVCVLTLGWL--LFDSALTFKNISGMILAVVGMVIYSW  212 (259)
Q Consensus       149 ~~~~-~~~~~~~~l~~~~~~~~si~~~~~pv~~~~~s~~--~~~e~~s~~~~~G~~lii~g~~~~~~  212 (259)
                      ..++ ..+.+..++++.+...+.....+.++...+.++.  +|||++|..+++|.+++++|+++.+.
T Consensus        56 ~~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~  122 (129)
T PRK02971         56 AGYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINL  122 (129)
T ss_pred             HHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhcc
Confidence            3333 3334556789999998888888888778777875  89999999999999999999999754

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=98.34  E-value=1.2e-05  Score=70.12  Aligned_cols=138  Identities=13%  Similarity=0.021  Sum_probs=97.3

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHhhcCCC-HHHHHHhhhhHHHHHHHHHHHhhhhhccCcccccccCchhHHHHHHH
Q 025040           67 NAKGFLCACVAVLSTSLQQITIGSLQKKYSIG-SFELLSKTAPIQAVSLLVLGPFVDYYLNGKFITTYKMTSGAILFIFL  145 (259)
Q Consensus        67 ~~~G~~~~l~a~l~~a~~~v~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  145 (259)
                      ++.-..+++.--.+...+++..|...++  .+ |+.+..++...+.+.+.+.... . ..   ..+........+..++.
T Consensus        47 ~~~~~~~~~~wy~~s~~~~~~nK~vl~~--~~~P~~l~~~~~~~~~l~~~~~~~~-~-~~---~~~~~~~~~~~~~~llp  119 (350)
T PTZ00343         47 KWKLALLFLTWYALNVLYVVDNKLALNM--LPLPWTISSLQLFVGWLFALLYWAT-G-FR---KIPRIKSLKLFLKNFLP  119 (350)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHHh--CChhHHHHHHHHHHHHHHHHHHHHh-C-CC---CCCCCCCHHHHHHHHHH
Confidence            4444455555555556777788887774  56 9999999987776654433221 1 00   00011101123445666


Q ss_pred             HHHHHHHHHHHHHHHhcccCceeeehhhhhhhHHHHhhhhhhcCCcccccchhhHHHHHHHHHHHH
Q 025040          146 SCALAVFCNVSQYLCIGRFSATSFQVLGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYS  211 (259)
Q Consensus       146 ~~~~~~~~~~~~~~~l~~~~~~~~si~~~~~pv~~~~~s~~~~~e~~s~~~~~G~~lii~g~~~~~  211 (259)
                      .++++.......+..+++.++..++++..++|+++.++++++++|+++..+++|.++++.|+.+..
T Consensus       120 ~gl~~~~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~  185 (350)
T PTZ00343        120 QGLCHLFVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALAS  185 (350)
T ss_pred             HHHHHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHhee
Confidence            666666655556678899999999999999999999999999999999999999999999998754

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=98.32  E-value=5.8e-06  Score=68.93  Aligned_cols=117  Identities=13%  Similarity=0.091  Sum_probs=84.7

Q ss_pred             HHHHHHHHHHHhhcCCCHHHHHHhhhhHHHHHHHHHHHhhhhhccCcccccccCchhHHHHHHHHHHHHHHHHHHHHHHh
Q 025040           82 SLQQITIGSLQKKYSIGSFELLSKTAPIQAVSLLVLGPFVDYYLNGKFITTYKMTSGAILFIFLSCALAVFCNVSQYLCI  161 (259)
Q Consensus        82 a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  161 (259)
                      +...+..|...++ ..++.....+....+.+.+.+.....            ..........+..++.....+.+.+..+
T Consensus         2 g~~~~~~k~~~~~-~~~~~~~~~~r~~~~~l~l~~~~~~~------------~~~~~~~~~~~~~~~~~~l~~~~~~~a~   68 (260)
T TIGR00950         2 GTTGVVIGQYLEG-QVPLYFAVFRRLIFALLLLLPLLRRR------------PPLKRLLRLLLLGALQIGVFYVLYFVAV   68 (260)
T ss_pred             cchHHHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHHhc------------cCHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3344555654443 57888888888766665554432111            0111122344444555556667777899


Q ss_pred             cccCceeeehhhhhhhHHHHhhhhhhcCCcccccchhhHHHHHHHHHHHH
Q 025040          162 GRFSATSFQVLGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYS  211 (259)
Q Consensus       162 ~~~~~~~~si~~~~~pv~~~~~s~~~~~e~~s~~~~~G~~lii~g~~~~~  211 (259)
                      ++.++...+++..+.|+++.+++.++++|+++..+++|+++.++|+.+..
T Consensus        69 ~~~~~~~~~ii~~~~P~~~~~~~~l~~~e~~~~~~~~gi~i~~~Gv~li~  118 (260)
T TIGR00950        69 KRLPVGEAALLLYLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVLLL  118 (260)
T ss_pred             HhcChhhhHHHHhhhHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHhhc
Confidence            99999999999999999999999999999999999999999999988864

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=98.30  E-value=1.8e-05  Score=67.71  Aligned_cols=126  Identities=8%  Similarity=0.056  Sum_probs=88.1

Q ss_pred             HHHHHHHHHHHHHHHHhhcCCCHHHHHHhhhhHHHHHHHHHHHhhhhhccCcccccccCchhHHHHHHHHHHHHHHHHHH
Q 025040           77 AVLSTSLQQITIGSLQKKYSIGSFELLSKTAPIQAVSLLVLGPFVDYYLNGKFITTYKMTSGAILFIFLSCALAVFCNVS  156 (259)
Q Consensus        77 a~l~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (259)
                      --++...++++.|...++. ..|..+..++...+.+.+.+....  ..     ......+...+..++..|++.......
T Consensus        10 w~~~~~~~~~~NK~~l~~~-~~P~~~~~~~~~~~~~~~~~~~~~--~~-----~~~~~~~~~~~~~~~~~g~~~~~~~~~   81 (302)
T TIGR00817        10 WYFLNVYFNIYNKKLLNVF-PYPYFKTLISLAVGSLYCLLSWSS--GL-----PKRLKISSALLKLLLPVAIVHTIGHVT   81 (302)
T ss_pred             HHHHHHHHHHHHHHHHhhC-ChhHHHHHHHHHHHHHHHHHHHHh--CC-----CCCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            3334445556677777642 567777777765554443332110  00     011122333445566666666666667


Q ss_pred             HHHHhcccCceeeehhhhhhhHHHHhhhhhhcCCcccccchhhHHHHHHHHHHH
Q 025040          157 QYLCIGRFSATSFQVLGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIY  210 (259)
Q Consensus       157 ~~~~l~~~~~~~~si~~~~~pv~~~~~s~~~~~e~~s~~~~~G~~lii~g~~~~  210 (259)
                      .+..++++++...+++..+.|+++.++++++++|+++..+++|.++.++|+.+.
T Consensus        82 ~~~~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~  135 (302)
T TIGR00817        82 SNVSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALA  135 (302)
T ss_pred             HHHHHHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhh
Confidence            778899999999999999999999999999999999999999999999998764

specificities overlap.

>PRK11689 aromatic amino acid exporter; Provisional

Probab=98.30  E-value=1.7e-05  Score=67.70  Aligned_cols=129  Identities=16%  Similarity=0.189  Sum_probs=89.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHhhhhHHHHHHHHHHHhhhhhccCcccccccCchhHHHHHHHHHH
Q 025040           69 KGFLCACVAVLSTSLQQITIGSLQKKYSIGSFELLSKTAPIQAVSLLVLGPFVDYYLNGKFITTYKMTSGAILFIFLSCA  148 (259)
Q Consensus        69 ~G~~~~l~a~l~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (259)
                      .++++.++++++|+...+..|...+  +.+|.....+....+.+.+++..   ..  .  ...  .....   .++..++
T Consensus         4 ~~~l~~l~a~~~Wg~~~~~~k~~~~--~~~P~~~~~~R~~~a~l~l~~~~---~~--~--~~~--~~~~~---~~~~~~l   69 (295)
T PRK11689          4 KATLIGLIAILLWSTMVGLIRGVSE--SLGPVGGAAMIYSVSGLLLLLTV---GF--P--RLR--QFPKR---YLLAGGL   69 (295)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHHc--cCChHHHHHHHHHHHHHHHHHHc---cc--c--ccc--cccHH---HHHHHhH
Confidence            4677889999999999999987655  58999999888766665554331   10  0  110  11111   2222333


Q ss_pred             HHHHHHHHHHHHh----cccCceeeehhhhhhhHHHHhhhhhhcCCcccccchhhHHHHHHHHHHHH
Q 025040          149 LAVFCNVSQYLCI----GRFSATSFQVLGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYS  211 (259)
Q Consensus       149 ~~~~~~~~~~~~l----~~~~~~~~si~~~~~pv~~~~~s~~~~~e~~s~~~~~G~~lii~g~~~~~  211 (259)
                      .......+.+...    +..++..++++.++.|+++.++++++++|+++..+++|+++.++|+++..
T Consensus        70 ~~~~~~~~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~  136 (295)
T PRK11689         70 LFVSYEICLALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAWVL  136 (295)
T ss_pred             HHHHHHHHHHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhhee
Confidence            2223333333333    45677788899999999999999999999999999999999999998764

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=98.25  E-value=2.2e-05  Score=67.05  Aligned_cols=124  Identities=15%  Similarity=0.163  Sum_probs=87.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHhhhhHHHHHHHHHHHhhhhhccCcccccccCchhHHHHHHHHHHHH
Q 025040           71 FLCACVAVLSTSLQQITIGSLQKKYSIGSFELLSKTAPIQAVSLLVLGPFVDYYLNGKFITTYKMTSGAILFIFLSCALA  150 (259)
Q Consensus        71 ~~~~l~a~l~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (259)
                      .++.++++++|+...+..|...+  +.+|....++....+.+.+++.   ...       ....+  .   .....+...
T Consensus         6 ~l~~l~~~~~Wg~~~~~~k~~~~--~~~p~~~~~~R~~~a~~~l~~~---~~~-------~~~~~--~---~~~~~g~~~   68 (299)
T PRK11453          6 GVLALLVVVVWGLNFVVIKVGLH--NMPPLMLAGLRFMLVAFPAIFF---VAR-------PKVPL--N---LLLGYGLTI   68 (299)
T ss_pred             HHHHHHHHHHHhhhHHHHHHHHh--cCCHHHHHHHHHHHHHHHHHHH---hcC-------CCCch--H---HHHHHHHHH
Confidence            35688899999999999987665  5899999999976655443322   110       00111  1   122223322


Q ss_pred             HH-HHHHHHHHhcc-cCceeeehhhhhhhHHHHhhhhhhcCCcccccchhhHHHHHHHHHHHH
Q 025040          151 VF-CNVSQYLCIGR-FSATSFQVLGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYS  211 (259)
Q Consensus       151 ~~-~~~~~~~~l~~-~~~~~~si~~~~~pv~~~~~s~~~~~e~~s~~~~~G~~lii~g~~~~~  211 (259)
                      .. .....+...++ .++...+++..+.|+++.++++++++|+++..+++|.++.++|+.+..
T Consensus        69 ~~~~~~~~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~  131 (299)
T PRK11453         69 SFGQFAFLFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLI  131 (299)
T ss_pred             HHHHHHHHHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhc
Confidence            22 22233445565 577788889999999999999999999999999999999999987764

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=98.22  E-value=3.8e-05  Score=65.38  Aligned_cols=129  Identities=14%  Similarity=0.025  Sum_probs=92.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHhhhhHHHHHHHHHHHhhhhhccCcccccccCchhHHHHHHHHHHHH
Q 025040           71 FLCACVAVLSTSLQQITIGSLQKKYSIGSFELLSKTAPIQAVSLLVLGPFVDYYLNGKFITTYKMTSGAILFIFLSCALA  150 (259)
Q Consensus        71 ~~~~l~a~l~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (259)
                      +...++-.+.|+...+..|....  +.+|.....+....+.+.+++.......     ..    .+...+......|...
T Consensus        10 ~~~~~~~~~iWg~~~~~~K~~~~--~~~p~~~~~~R~~~a~l~ll~~~~~~~~-----~~----~~~~~~~~~~~~g~~~   78 (292)
T PRK11272         10 FGALFALYIIWGSTYLVIRIGVE--SWPPLMMAGVRFLIAGILLLAFLLLRGH-----PL----PTLRQWLNAALIGLLL   78 (292)
T ss_pred             HHHHHHHHHHHhhHHHHHHHHhc--cCCHHHHHHHHHHHHHHHHHHHHHHhCC-----CC----CcHHHHHHHHHHHHHH
Confidence            34567788899999999987555  6899999999988777666554322110     10    0111222333344333


Q ss_pred             -HHHHHHHHHHh-cccCceeeehhhhhhhHHHHhhhhhhcCCcccccchhhHHHHHHHHHHHH
Q 025040          151 -VFCNVSQYLCI-GRFSATSFQVLGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYS  211 (259)
Q Consensus       151 -~~~~~~~~~~l-~~~~~~~~si~~~~~pv~~~~~s~~~~~e~~s~~~~~G~~lii~g~~~~~  211 (259)
                       .......+... ++.++..++++.++.|+++.+++++ ++|+++..+++|.++.++|+.+..
T Consensus        79 ~~~~~~~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~~Gv~ll~  140 (292)
T PRK11272         79 LAVGNGMVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLEWLGIAIGLAGIVLLN  140 (292)
T ss_pred             HHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchhHHHHHHHHHHhHHHHh
Confidence             23344445556 8888888999999999999999986 799999999999999999988764

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=98.12  E-value=4.7e-07  Score=66.50  Aligned_cols=57  Identities=14%  Similarity=0.240  Sum_probs=53.4

Q ss_pred             eeeeeeeecccchhHHHHHhhhhHHHHHHHHHHHhccccChhhhhhhhheeecceee
Q 025040            3 IAGMNFSLMLNSVGFYQISKLSMIPVVCVMEWILHNKHYSKEVKMAVVVVVIGVGVC   59 (259)
Q Consensus         3 ~~~~n~al~~~~~~~~~~l~~~~p~~~~l~~~l~~~~~~~~~~~~~~~l~~~Gv~l~   59 (259)
                      ..+.+.++++.+++..+.+.++.|+++.+++++++||+++++++.++++++.|++++
T Consensus        68 ~~~~~~a~~~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~  124 (126)
T PF00892_consen   68 YLLYFYALKYISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLI  124 (126)
T ss_pred             HHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHH
Confidence            456788999999999999999999999999999999999999999999999998765

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=98.01  E-value=1.9e-05  Score=57.33  Aligned_cols=70  Identities=16%  Similarity=0.395  Sum_probs=56.9

Q ss_pred             HHHHHHHH-HHHHHHHHHhcccCceeeehhhhhhhHHHHhhhhhhcCCcccccchhhHHHHHHHHHHHHHHh
Q 025040          144 FLSCALAV-FCNVSQYLCIGRFSATSFQVLGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYSWAV  214 (259)
Q Consensus       144 ~~~~~~~~-~~~~~~~~~l~~~~~~~~si~~~~~pv~~~~~s~~~~~e~~s~~~~~G~~lii~g~~~~~~~~  214 (259)
                      +..+..+. ..+...++..++.++ .++.+..+.|+++.++++++++|+++..+++|.+++++|+.+..+.+
T Consensus        38 ~~~g~~~~~~~~~~~~~a~~~~~~-~v~~i~~~~pi~~~ll~~~~~~er~~~~~~~a~~l~~~Gv~li~~~~  108 (113)
T PF13536_consen   38 ILAGLLGFGVAYLLFFYALSYAPA-LVAAIFSLSPIFTALLSWLFFKERLSPRRWLAILLILIGVILIAWSD  108 (113)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhh
Confidence            33344333 445556667888885 77799999999999999999999999999999999999999987653

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=97.98  E-value=4.9e-05  Score=64.66  Aligned_cols=130  Identities=15%  Similarity=0.095  Sum_probs=92.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHhhhhHHHHHHHHHHHhhhhhccCcccccccCchhHHHHHHHHHHH
Q 025040           70 GFLCACVAVLSTSLQQITIGSLQKKYSIGSFELLSKTAPIQAVSLLVLGPFVDYYLNGKFITTYKMTSGAILFIFLSCAL  149 (259)
Q Consensus        70 G~~~~l~a~l~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (259)
                      |++++++++++|+...+..|+..   +.++.+...  ...+.+.+.........    ..    ......+...+++|..
T Consensus         2 ~~l~~lia~~~wGs~g~~~k~~~---g~~~~~~~~--~~~g~l~~~~~~~~~~~----~~----~~~~~~~~~g~l~G~~   68 (290)
T TIGR00776         2 DILIALIPALFWGSFVLINVKIG---GGPYSQTLG--TTFGALILSIAIAIFVL----PE----FWALSIFLVGLLSGAF   68 (290)
T ss_pred             chHHHHHHHHHHhhhHHHHhccC---CCHHHHHHH--HHHHHHHHHHHHHHHhC----Cc----ccccHHHHHHHHHHHH
Confidence            67899999999999999998754   455555542  22333333322222210    01    1123444455666666


Q ss_pred             HHHHHHHHHHHhcccCceeeehhhh-hhhHHHHhhhhhhcCCcccccc----hhhHHHHHHHHHHHHH
Q 025040          150 AVFCNVSQYLCIGRFSATSFQVLGH-MKTVCVLTLGWLLFDSALTFKN----ISGMILAVVGMVIYSW  212 (259)
Q Consensus       150 ~~~~~~~~~~~l~~~~~~~~si~~~-~~pv~~~~~s~~~~~e~~s~~~----~~G~~lii~g~~~~~~  212 (259)
                      =...|++.+.++++.+....-.+.+ +.+++..+++.++|+|+.+..+    ++|.++++.|+.+...
T Consensus        69 w~ig~~~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~~  136 (290)
T TIGR00776        69 WALGQINQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTSR  136 (290)
T ss_pred             HHhhhhhHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEEe
Confidence            5556788888999999888877777 8888999999999999999999    9999999999888643

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=97.96  E-value=8.5e-05  Score=63.59  Aligned_cols=127  Identities=13%  Similarity=0.074  Sum_probs=87.7

Q ss_pred             HHHHHHHHHHHHhhcCCC--HHHHHHhhhhHHHHHHHHHHHhhhhhccCcccccccCchhHHHHHHHHHHHHHHHHHHHH
Q 025040           81 TSLQQITIGSLQKKYSIG--SFELLSKTAPIQAVSLLVLGPFVDYYLNGKFITTYKMTSGAILFIFLSCALAVFCNVSQY  158 (259)
Q Consensus        81 ~a~~~v~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (259)
                      +..+.++++++.++....  +..+.+.+.....+..........    ......     ..+.-....+++........+
T Consensus        12 ~~~~g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~----~~~~~~-----~~~~~~~~~~~~~~~~~~~~~   82 (303)
T PF08449_consen   12 CCSYGILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFK----FPKSRK-----IPLKKYAILSFLFFLASVLSN   82 (303)
T ss_pred             HHHHHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhcc----ccCCCc-----ChHHHHHHHHHHHHHHHHHHH
Confidence            334667788888655555  666766665444433333222111    001111     111233444556666666777


Q ss_pred             HHhcccCceeeehhhhhhhHHHHhhhhhhcCCcccccchhhHHHHHHHHHHHHHHhhH
Q 025040          159 LCIGRFSATSFQVLGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYSWAVEA  216 (259)
Q Consensus       159 ~~l~~~~~~~~si~~~~~pv~~~~~s~~~~~e~~s~~~~~G~~lii~g~~~~~~~~~~  216 (259)
                      .++++++..+..+.-..+|+.+.++++++++++.+..++.+.+++.+|+.+....+..
T Consensus        83 ~al~~i~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~  140 (303)
T PF08449_consen   83 AALKYISYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSS  140 (303)
T ss_pred             HHHHhCChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeecccc
Confidence            8899999999999999999999999999999999999999999999999998876543

; GO: 0055085 transmembrane transport

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=97.95  E-value=1.5e-06  Score=62.84  Aligned_cols=58  Identities=14%  Similarity=-0.023  Sum_probs=52.9

Q ss_pred             eeeeeeeecccchhHHHHHhhhhHHHHHHHHHHHhccccChhhhhhhhheeecceeee
Q 025040            3 IAGMNFSLMLNSVGFYQISKLSMIPVVCVMEWILHNKHYSKEVKMAVVVVVIGVGVCT   60 (259)
Q Consensus         3 ~~~~n~al~~~~~~~~~~l~~~~p~~~~l~~~l~~~~~~~~~~~~~~~l~~~Gv~l~~   60 (259)
                      ..+...+++.+|++.+..+-++.++++.+++++++|||+++++++|+.+.++|++++.
T Consensus        51 ~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~  108 (111)
T PRK15051         51 MVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILG  108 (111)
T ss_pred             HHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence            3455678899999999999999999999999999999999999999999999998764

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=97.89  E-value=0.0004  Score=58.40  Aligned_cols=139  Identities=17%  Similarity=0.094  Sum_probs=93.0

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHhhhhHHHHHHHHHHHhhhhhccCcccccccCchhHHHHHHHHH
Q 025040           68 AKGFLCACVAVLSTSLQQITIGSLQKKYSIGSFELLSKTAPIQAVSLLVLGPFVDYYLNGKFITTYKMTSGAILFIFLSC  147 (259)
Q Consensus        68 ~~G~~~~l~a~l~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  147 (259)
                      ..+....++.++.|+......+....+ ..++..........+...   ..+...... . ..  .......+...+..+
T Consensus         6 ~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~---~~~~~~~~~-~-~~--~~~~~~~~~~~~~~~   77 (292)
T COG0697           6 LLGLLALLLWGLLWGLSFIALKLAVES-LDPFLFAAALRFLIAALL---LLPLLLLEP-R-GL--RPALRPWLLLLLLAL   77 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcc-cCChHHHHHHHHHHHHHH---HHHHHHhhc-c-cc--cccccchHHHHHHHH
Confidence            457778888889999988888876553 244455444443333322   111111100 0 00  011111233555555


Q ss_pred             HHHHHHHHHHHHHhcccCceeeehhhhhhhHHHHhhhh-hhcCCcccccchhhHHHHHHHHHHHHHHh
Q 025040          148 ALAVFCNVSQYLCIGRFSATSFQVLGHMKTVCVLTLGW-LLFDSALTFKNISGMILAVVGMVIYSWAV  214 (259)
Q Consensus       148 ~~~~~~~~~~~~~l~~~~~~~~si~~~~~pv~~~~~s~-~~~~e~~s~~~~~G~~lii~g~~~~~~~~  214 (259)
                      +.........+..++++++...+.+....|+++.++++ ++++|+++..++.|.++.+.|+.+.....
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~  145 (292)
T COG0697          78 LGLALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGG  145 (292)
T ss_pred             HHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCC
Confidence            55556666677789999999999999999999999997 77799999999999999999999876543

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=97.89  E-value=4.4e-05  Score=55.23  Aligned_cols=55  Identities=15%  Similarity=0.173  Sum_probs=48.9

Q ss_pred             HHHHhcccCceeeehhhhhhhHHHHhhhhhhcCCcccccchhhHHHHHHHHHHHH
Q 025040          157 QYLCIGRFSATSFQVLGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYS  211 (259)
Q Consensus       157 ~~~~l~~~~~~~~si~~~~~pv~~~~~s~~~~~e~~s~~~~~G~~lii~g~~~~~  211 (259)
                      ...++++.+...+...-.+.++.+.+.|+++|||+++..+++|.++++.|+++..
T Consensus        54 ~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~  108 (111)
T PRK15051         54 WLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILG  108 (111)
T ss_pred             HHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence            3456888888888888889999999999999999999999999999999998753

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=97.83  E-value=0.00055  Score=51.51  Aligned_cols=131  Identities=19%  Similarity=0.259  Sum_probs=93.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHhhhhHHHHHHHHHHHhhhhhccCcccccccCchhHHHHHHHHHHHH
Q 025040           71 FLCACVAVLSTSLQQITIGSLQKKYSIGSFELLSKTAPIQAVSLLVLGPFVDYYLNGKFITTYKMTSGAILFIFLSCALA  150 (259)
Q Consensus        71 ~~~~l~a~l~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (259)
                      .++++++.++-+++.....++.++.+ +|+.........+.+.+.....+.+.. ......+.+|      .....|+++
T Consensus         3 ~lla~~aG~~i~~q~~~N~~L~~~~g-s~~~as~i~~~~G~i~~~i~~~~~~~~-~~~~~~~~p~------w~~lGG~lG   74 (138)
T PF04657_consen    3 ILLALLAGALIALQAAFNGQLGKALG-SPLVASFISFGVGFILLLIILLITGRP-SLASLSSVPW------WAYLGGLLG   74 (138)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhC-ccHHHHHHHHHHHHHHHHHHHHHhccc-ccchhccCCh------HHhccHHHH
Confidence            46778888888898888888877543 588888888888887777766655432 1111111122      444588888


Q ss_pred             HHHHHHHHHHhcccCceeeehhhhh-hhHHHHhhhhh-hcC---CcccccchhhHHHHHHHHHH
Q 025040          151 VFCNVSQYLCIGRFSATSFQVLGHM-KTVCVLTLGWL-LFD---SALTFKNISGMILAVVGMVI  209 (259)
Q Consensus       151 ~~~~~~~~~~l~~~~~~~~si~~~~-~pv~~~~~s~~-~~~---e~~s~~~~~G~~lii~g~~~  209 (259)
                      .....+.....+++++......... +-+.+.+++.+ +|+   ++++..+++|.+++++|+.+
T Consensus        75 ~~~V~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L  138 (138)
T PF04657_consen   75 VFFVLSNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL  138 (138)
T ss_pred             HHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence            8877777788899999888777655 45566777776 343   46999999999999999863

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=97.69  E-value=0.00045  Score=59.58  Aligned_cols=74  Identities=23%  Similarity=0.295  Sum_probs=65.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhcccCceeeehhhhhhhHHHHhhhhhhcCCcccccchhhHHHHHHHHHHHHHHh
Q 025040          141 LFIFLSCALAVFCNVSQYLCIGRFSATSFQVLGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYSWAV  214 (259)
Q Consensus       141 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~si~~~~~pv~~~~~s~~~~~e~~s~~~~~G~~lii~g~~~~~~~~  214 (259)
                      +-.++.+++=...|+....+.++++.+...++.....+++.++|++++++++++.|++|+++++.|+.+....+
T Consensus        80 w~y~lla~~Dv~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD  153 (334)
T PF06027_consen   80 WKYFLLALLDVEANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSD  153 (334)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeec
Confidence            34444567777789989999999999999999999999999999999999999999999999999998876554

Some of the sequences in this family are annotated as putative membrane proteins.

>PRK13499 rhamnose-proton symporter; Provisional

Probab=97.51  E-value=0.0037  Score=54.11  Aligned_cols=205  Identities=10%  Similarity=0.044  Sum_probs=118.7

Q ss_pred             eeeeecccchhHHHHH-hhhhHHHHHHHHHHHhcccc---C----hhhhhhhhheeecceeeee----ccc--------c
Q 025040            6 MNFSLMLNSVGFYQIS-KLSMIPVVCVMEWILHNKHY---S----KEVKMAVVVVVIGVGVCTI----TDV--------K   65 (259)
Q Consensus         6 ~n~al~~~~~~~~~~l-~~~~p~~~~l~~~l~~~~~~---~----~~~~~~~~l~~~Gv~l~~~----~~~--------~   65 (259)
                      +..+++++.++...-+ ..++-+...++..++++|=.   +    ..-.+++++.++|+++.+.    .|.        +
T Consensus        90 ~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~Ag~~k~~~~~~~~~~~  169 (345)
T PRK13499         90 YGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGRAGQLKERKMGIKKAEE  169 (345)
T ss_pred             HHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHHhhhhcccccccccccc
Confidence            3446777777765443 45777888888888887533   2    3356788888899999776    332        1


Q ss_pred             c-chHHHHHHHHHHHHHHHHHH-------HHHHHHhhcCCCHHHHHHhhhhHHHHHHHHHHHhhhhh--ccCcc---ccc
Q 025040           66 V-NAKGFLCACVAVLSTSLQQI-------TIGSLQKKYSIGSFELLSKTAPIQAVSLLVLGPFVDYY--LNGKF---ITT  132 (259)
Q Consensus        66 ~-~~~G~~~~l~a~l~~a~~~v-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~---~~~  132 (259)
                      . .-.|++.++++.+.+++|+.       ..+... +.+.++.....-+.....+..+.....+...  ..++.   ..+
T Consensus       170 ~~~~KGi~ialisgi~~~~f~~~~~~~~~~~~~a~-~~g~~~~~~~lp~~~~~~~G~~~~n~~~~~~~~~k~~~~~~~~~  248 (345)
T PRK13499        170 FNLKKGLILAVMSGIFSACFSFAMDAGKPMHEAAA-ALGVDPLYAALPSYVVIMGGGAITNLGFCFIRLAKNKDLSLKAD  248 (345)
T ss_pred             cchHhHHHHHHHHHHHHHHHHHHHhhccchhhhhh-hcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccchh
Confidence            2 24799999999999999994       332211 1345554443333221111111111111010  01111   111


Q ss_pred             ccCc----hhHHHHHHHHHHHHHHHHHHHHHHhcccCceeeeh---hh-hhhhHHHHhhhhhhcCCccc------ccchh
Q 025040          133 YKMT----SGAILFIFLSCALAVFCNVSQYLCIGRFSATSFQV---LG-HMKTVCVLTLGWLLFDSALT------FKNIS  198 (259)
Q Consensus       133 ~~~~----~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~si---~~-~~~pv~~~~~s~~~~~e~~s------~~~~~  198 (259)
                      ...+    ..-.....+.|+.=+..++.+...-.+.+.....+   ++ .+.-+++.+.|+ +++|.-+      ...++
T Consensus       249 ~~~~~~~~~~n~l~~~l~G~~W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~ViistlwGi-~lkE~K~a~~k~~~~l~~  327 (345)
T PRK13499        249 FSLAKPLLITNVLLSALAGVMWYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGNLWGL-VLKEWKGASRRPVRVLSL  327 (345)
T ss_pred             ccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHHHhhh-hhhhccCCCccchhHHHH
Confidence            1111    22333445556555556666655556665443333   33 566688999999 5999877      66789


Q ss_pred             hHHHHHHHHHHHHH
Q 025040          199 GMILAVVGMVIYSW  212 (259)
Q Consensus       199 G~~lii~g~~~~~~  212 (259)
                      |.+++++|..+...
T Consensus       328 G~vliI~g~~lig~  341 (345)
T PRK13499        328 GCVVIILAANIVGL  341 (345)
T ss_pred             HHHHHHHHHHHHhh
Confidence            99999999887654

>PRK13499 rhamnose-proton symporter; Provisional

Probab=97.46  E-value=0.0014  Score=56.68  Aligned_cols=142  Identities=15%  Similarity=0.103  Sum_probs=92.8

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHhhhhHHHHHHHHHHHhhh-hhccCcccccc-cCchhHHHHHHH
Q 025040           68 AKGFLCACVAVLSTSLQQITIGSLQKKYSIGSFELLSKTAPIQAVSLLVLGPFVD-YYLNGKFITTY-KMTSGAILFIFL  145 (259)
Q Consensus        68 ~~G~~~~l~a~l~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~  145 (259)
                      ..|+++++++++|++.+.+-.|+ .|+   -+++.. |- ..+. ...++.|+.. .....+..+.. +.+...+...++
T Consensus         6 ~~G~~~~~i~~~~~GS~~~p~K~-~k~---w~wE~~-W~-v~gi-~~wl~~~~~~g~~~~~~f~~~~~~~~~~~~~~~~l   78 (345)
T PRK13499          6 ILGIIWHLIGGASSGSFYAPFKK-VKK---WSWETM-WS-VGGI-FSWLILPWLIAALLLPDFWAYYSSFSGSTLLPVFL   78 (345)
T ss_pred             HHHHHHHHHHHHHhhcccccccc-cCC---CchhHH-HH-HHHH-HHHHHHHHHHHHHHhhhHHHHHHhcCHHHHHHHHH
Confidence            46999999999999999999976 232   334443 44 2233 3333333221 11112222222 255666667777


Q ss_pred             HHHHHHHHHHHHHHHhcccCceee-ehhhhhhhHHHHhhhhhhcCCcc---c----ccchhhHHHHHHHHHHHHHHhhH
Q 025040          146 SCALAVFCNVSQYLCIGRFSATSF-QVLGHMKTVCVLTLGWLLFDSAL---T----FKNISGMILAVVGMVIYSWAVEA  216 (259)
Q Consensus       146 ~~~~~~~~~~~~~~~l~~~~~~~~-si~~~~~pv~~~~~s~~~~~e~~---s----~~~~~G~~lii~g~~~~~~~~~~  216 (259)
                      +|++=...+...+..+++.+.... .+..-++-+.+++++.+++||--   +    ..-++|.+++++|+++..+...+
T Consensus        79 ~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~Ag~~  157 (345)
T PRK13499         79 FGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGRAGQL  157 (345)
T ss_pred             HHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHHhhhh
Confidence            777777777777888888776544 44556788889999999999632   2    34678999999999998875433

>COG2510 Predicted membrane protein [Function unknown]

Probab=97.42  E-value=1.7e-05  Score=57.48  Aligned_cols=57  Identities=11%  Similarity=0.103  Sum_probs=49.2

Q ss_pred             eeeeeecccchhHHHHHhhhhHHHHHHHHHHHhccccChhhhhhhhheeecceeeee
Q 025040            5 GMNFSLMLNSVGFYQISKLSMIPVVCVMEWILHNKHYSKEVKMAVVVVVIGVGVCTI   61 (259)
Q Consensus         5 ~~n~al~~~~~~~~~~l~~~~p~~~~l~~~l~~~~~~~~~~~~~~~l~~~Gv~l~~~   61 (259)
                      +.+.+++.-.+|...=+..++|+++++++++++|||++..+|+|+++.++|+++++.
T Consensus        83 ~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs~  139 (140)
T COG2510          83 LYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVSL  139 (140)
T ss_pred             HHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEec
Confidence            445566666777777778899999999999999999999999999999999998753

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=97.41  E-value=0.00022  Score=59.00  Aligned_cols=75  Identities=21%  Similarity=0.328  Sum_probs=66.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhcccCceeeehhhhhhhHHHHhhhhhhcCCcccccchhhHHHHHHHHHHHHHHhh
Q 025040          141 LFIFLSCALAVFCNVSQYLCIGRFSATSFQVLGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYSWAVE  215 (259)
Q Consensus       141 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~si~~~~~pv~~~~~s~~~~~e~~s~~~~~G~~lii~g~~~~~~~~~  215 (259)
                      +.....+++-.+.|...|..+++++|.+..+....+.+++.++++++++.+++..||++..+...|+.+......
T Consensus        18 ~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~   92 (244)
T PF04142_consen   18 LKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSS   92 (244)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCc
Confidence            455566777777888888999999999999999999999999999999999999999999999999999765443

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=97.41  E-value=0.0034  Score=53.47  Aligned_cols=105  Identities=13%  Similarity=0.017  Sum_probs=74.3

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHhhhhHHHHHHHHHHHhhhhhccCcccccccCchhHHHHHHHHH
Q 025040           68 AKGFLCACVAVLSTSLQQITIGSLQKKYSIGSFELLSKTAPIQAVSLLVLGPFVDYYLNGKFITTYKMTSGAILFIFLSC  147 (259)
Q Consensus        68 ~~G~~~~l~a~l~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  147 (259)
                      ..|..+.++++++|+......|...+  +.+|..+..+....+.+.+++......      .    ..+...+...+..+
T Consensus        11 ~~~~~~~~la~~~~~~~~~~~K~~~~--~~~~~~~~~~R~~~a~l~l~~~~~~~~------~----~~~~~~~~~~~~~g   78 (293)
T PRK10532         11 WLPILLLLIAMASIQSGASLAKSLFP--LVGAPGVTALRLALGTLILIAIFKPWR------L----RFAKEQRLPLLFYG   78 (293)
T ss_pred             chHHHHHHHHHHHHHhhHHHHHHHHH--HcCHHHHHHHHHHHHHHHHHHHHhHHh------c----cCCHHHHHHHHHHH
Confidence            46899999999999999999987766  479999999998887766654321110      0    11111222233334


Q ss_pred             HHHHHHHHHHHHHhcccCceeeehhhhhhhHHHHhhh
Q 025040          148 ALAVFCNVSQYLCIGRFSATSFQVLGHMKTVCVLTLG  184 (259)
Q Consensus       148 ~~~~~~~~~~~~~l~~~~~~~~si~~~~~pv~~~~~s  184 (259)
                      ......+...++.++++++...+++.+..|+++.+++
T Consensus        79 ~~~~~~~~~~~~al~~~~~~~a~~l~~t~Pi~~~ll~  115 (293)
T PRK10532         79 VSLGGMNYLFYLSIQTVPLGIAVALEFTGPLAVALFS  115 (293)
T ss_pred             HHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHh
Confidence            4445556667778999999999999999999998877

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=97.31  E-value=4.9e-05  Score=56.43  Aligned_cols=61  Identities=13%  Similarity=0.101  Sum_probs=54.1

Q ss_pred             ceeeeeeeecccchhHHHHHhhhhHHHHHHHHHH--HhccccChhhhhhhhheeecceeeeec
Q 025040            2 SIAGMNFSLMLNSVGFYQISKLSMIPVVCVMEWI--LHNKHYSKEVKMAVVVVVIGVGVCTIT   62 (259)
Q Consensus         2 ~~~~~n~al~~~~~~~~~~l~~~~p~~~~l~~~l--~~~~~~~~~~~~~~~l~~~Gv~l~~~~   62 (259)
                      ++.+++.+++..+++.+.-+.+..+.++.+.++.  ++||+++..+++|+++.++|+.++..+
T Consensus        61 a~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~  123 (129)
T PRK02971         61 SMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLP  123 (129)
T ss_pred             HHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccC
Confidence            4567889999999999999999998888888885  899999999999999999999987643

>KOG2922 consensus Uncharacterized conserved protein [Function unknown]

Probab=97.27  E-value=0.00067  Score=57.09  Aligned_cols=57  Identities=7%  Similarity=0.053  Sum_probs=52.8

Q ss_pred             eeeeeecccchhHHHHHhhhhHHHHHHHHHHHhccccChhhhhhhhheeecceeeee
Q 025040            5 GMNFSLMLNSVGFYQISKLSMIPVVCVMEWILHNKHYSKEVKMAVVVVVIGVGVCTI   61 (259)
Q Consensus         5 ~~n~al~~~~~~~~~~l~~~~p~~~~l~~~l~~~~~~~~~~~~~~~l~~~Gv~l~~~   61 (259)
                      .++.|+.+.|.+..+-+.++..+..++++..++|||++....+|..++++|-.+++.
T Consensus        80 ~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~  136 (335)
T KOG2922|consen   80 ANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVI  136 (335)
T ss_pred             hhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEE
Confidence            456688999999999999999999999999999999999999999999999888764

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=97.25  E-value=7.3e-05  Score=61.17  Aligned_cols=132  Identities=17%  Similarity=0.226  Sum_probs=86.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHhhhhHHHHHHHHHHHhhhhhccCcccccccCchhHHHHHHHHHH
Q 025040           69 KGFLCACVAVLSTSLQQITIGSLQKKYSIGSFELLSKTAPIQAVSLLVLGPFVDYYLNGKFITTYKMTSGAILFIFLSCA  148 (259)
Q Consensus        69 ~G~~~~l~a~l~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (259)
                      .|..+..++ ..+....+..++..   ..+|.+......   ...+++..|..-...+. .+.+..-  .  ..+++=|+
T Consensus        38 ~gl~l~~vs-~ff~~~~vv~t~~~---e~~p~e~a~~r~---l~~mlit~pcliy~~~~-v~gp~g~--R--~~LiLRg~  105 (346)
T KOG4510|consen   38 LGLLLLTVS-YFFNSCMVVSTKVL---ENDPMELASFRL---LVRMLITYPCLIYYMQP-VIGPEGK--R--KWLILRGF  105 (346)
T ss_pred             cCceehhhH-HHHhhHHHhhhhhh---ccChhHhhhhhh---hhehhhhheEEEEEeee-eecCCCc--E--EEEEeehh
Confidence            466666666 55666666666554   345555544442   22223222221110000 0001100  0  02344556


Q ss_pred             HHHHHHHHHHHHhcccCceeeehhhhhhhHHHHhhhhhhcCCcccccchhhHHHHHHHHHHHHH
Q 025040          149 LAVFCNVSQYLCIGRFSATSFQVLGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYSW  212 (259)
Q Consensus       149 ~~~~~~~~~~~~l~~~~~~~~si~~~~~pv~~~~~s~~~~~e~~s~~~~~G~~lii~g~~~~~~  212 (259)
                      .++..-+..|+++.+.+-..+.++....|+++++++|.+++|+.|....+|..+.+.|+++..+
T Consensus       106 mG~tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvR  169 (346)
T KOG4510|consen  106 MGFTGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVR  169 (346)
T ss_pred             hhhhHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEec
Confidence            6666667788899999999999999999999999999999999999999999999999998653

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=97.25  E-value=0.00081  Score=49.12  Aligned_cols=54  Identities=19%  Similarity=0.409  Sum_probs=42.6

Q ss_pred             HHhcccCcee-eehhhhhhhHHHHhhhhhhcCCcccccchhhHHHHHHHHHHHHH
Q 025040          159 LCIGRFSATS-FQVLGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYSW  212 (259)
Q Consensus       159 ~~l~~~~~~~-~si~~~~~pv~~~~~s~~~~~e~~s~~~~~G~~lii~g~~~~~~  212 (259)
                      .++++++... .++...+.-+.+.+.|+++|+|++|..+++|+.++++|+...+.
T Consensus        49 ~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l  103 (120)
T PRK10452         49 FAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKS  103 (120)
T ss_pred             HHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhc
Confidence            3456654432 34445677888899999999999999999999999999988643

>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function

Probab=97.23  E-value=0.00027  Score=58.41  Aligned_cols=132  Identities=18%  Similarity=0.217  Sum_probs=71.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHhhhhHHHHHHHHHHHhhhhhccCcccccccCchhHHHHHHHHHHH
Q 025040           70 GFLCACVAVLSTSLQQITIGSLQKKYSIGSFELLSKTAPIQAVSLLVLGPFVDYYLNGKFITTYKMTSGAILFIFLSCAL  149 (259)
Q Consensus        70 G~~~~l~a~l~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (259)
                      |++.+++|+++++...+=.|+.-   .-|+.-...+++....+...+.....+.         ..+.+    +..++|..
T Consensus         1 G~~a~~va~~~fGs~~vPvK~~~---~gDg~~fQw~~~~~i~~~g~~v~~~~~~---------p~f~p----~amlgG~l   64 (254)
T PF07857_consen    1 GYIACIVAVLFFGSNFVPVKKFD---TGDGFFFQWVMCSGIFLVGLVVNLILGF---------PPFYP----WAMLGGAL   64 (254)
T ss_pred             CchhHHHHHHHhcccceeeEecc---CCCcHHHHHHHHHHHHHHHHHHHHhcCC---------Cccee----HHHhhhhh
Confidence            67888999999998888887543   2355555544432222222222111110         01111    22233322


Q ss_pred             HHHHHHHHHHHhcccCc-eeeehhhhhhhHHHHhhhhh-hcCCc-----ccccchhhHHHHHHHHHHHHHHhhHH
Q 025040          150 AVFCNVSQYLCIGRFSA-TSFQVLGHMKTVCVLTLGWL-LFDSA-----LTFKNISGMILAVVGMVIYSWAVEAE  217 (259)
Q Consensus       150 ~~~~~~~~~~~l~~~~~-~~~si~~~~~pv~~~~~s~~-~~~e~-----~s~~~~~G~~lii~g~~~~~~~~~~~  217 (259)
                      =...|.+..-+++.++- .-..+.+..+-+++...|-+ +||++     -.+..++|++++++|..++...|...
T Consensus        65 W~~gN~~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~fik~~~  139 (254)
T PF07857_consen   65 WATGNILVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVPSSPWLNYIGVALVLVSGIIFSFIKSEE  139 (254)
T ss_pred             hhcCceeehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceeccccccccchhHHHHHHHHHHHHHHHheeeecCCC
Confidence            22233333333444331 22235556666667766654 67654     46889999999999999998765443

The region concerned is approximately 280 residues long.

>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=96.91  E-value=0.022  Score=43.04  Aligned_cols=136  Identities=17%  Similarity=0.136  Sum_probs=87.2

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHhhhhHHHHHHHHHHHhhhhhccCcccccccCchhHHHHHHHHH
Q 025040           68 AKGFLCACVAVLSTSLQQITIGSLQKKYSIGSFELLSKTAPIQAVSLLVLGPFVDYYLNGKFITTYKMTSGAILFIFLSC  147 (259)
Q Consensus        68 ~~G~~~~l~a~l~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  147 (259)
                      +...++.+.+.++-..+.-...++.+..+ +|.--.......|.+.+.....+.+.........+.+      ++..+.|
T Consensus         4 ~l~ll~~i~aG~~l~~Q~~iN~qL~~~~~-spl~As~isf~vGt~~L~~l~l~~~~~~~~a~~~~~p------wW~~~GG   76 (150)
T COG3238           4 YLYLLFAILAGALLPLQAAINGRLARYLG-SPLLASLISFLVGTVLLLILLLIKQGHPGLAAVASAP------WWAWIGG   76 (150)
T ss_pred             HHHHHHHHHHhhhhhhHHHHHHHHHHHcC-ChHHHHHHHHHHHHHHHHHHHHHhcCCCchhhccCCc------hHHHHcc
Confidence            45667888888888888888887776544 5766666676667777766665543221111111112      2455566


Q ss_pred             HHHHHHHHHHHHHhcccCceeeehhh-hhhhHHHHhhhhhhc-C---CcccccchhhHHHHHHHHHHH
Q 025040          148 ALAVFCNVSQYLCIGRFSATSFQVLG-HMKTVCVLTLGWLLF-D---SALTFKNISGMILAVVGMVIY  210 (259)
Q Consensus       148 ~~~~~~~~~~~~~l~~~~~~~~si~~-~~~pv~~~~~s~~~~-~---e~~s~~~~~G~~lii~g~~~~  210 (259)
                      +++.++-........+++++.+..+. .-+-+.+.+++.+=+ |   .+++...++|++++++|+.+.
T Consensus        77 ~lGa~~vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~  144 (150)
T COG3238          77 LLGAIFVTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLA  144 (150)
T ss_pred             chhhhhhhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHh
Confidence            77777666666677888777654443 335555566665533 3   359999999999999996554

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=96.89  E-value=0.0026  Score=45.79  Aligned_cols=53  Identities=19%  Similarity=0.425  Sum_probs=42.2

Q ss_pred             HhcccCcee-eehhhhhhhHHHHhhhhhhcCCcccccchhhHHHHHHHHHHHHH
Q 025040          160 CIGRFSATS-FQVLGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYSW  212 (259)
Q Consensus       160 ~l~~~~~~~-~si~~~~~pv~~~~~s~~~~~e~~s~~~~~G~~lii~g~~~~~~  212 (259)
                      ++++.+... .++..-+..+.+.+.|+++|+|++++.+++|+.++++|++..+.
T Consensus        50 al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l  103 (110)
T PRK09541         50 TLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINL  103 (110)
T ss_pred             HHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence            455554332 34455667788899999999999999999999999999999754

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=96.87  E-value=0.0039  Score=44.16  Aligned_cols=53  Identities=17%  Similarity=0.359  Sum_probs=45.3

Q ss_pred             HhcccCc-eeeehhhhhhhHHHHhhhhhhcCCcccccchhhHHHHHHHHHHHHH
Q 025040          160 CIGRFSA-TSFQVLGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYSW  212 (259)
Q Consensus       160 ~l~~~~~-~~~si~~~~~pv~~~~~s~~~~~e~~s~~~~~G~~lii~g~~~~~~  212 (259)
                      ++|+++- +..++..-...+.+.+.|+++|+|+++..+++|+.++++|+..-+.
T Consensus        50 alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~  103 (106)
T COG2076          50 ALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKL  103 (106)
T ss_pred             HHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhh
Confidence            5677553 3457788888999999999999999999999999999999988654

>PRK11431 multidrug efflux system protein; Provisional

Probab=96.86  E-value=0.0047  Score=44.03  Aligned_cols=53  Identities=15%  Similarity=0.257  Sum_probs=44.8

Q ss_pred             HHhcccCc-eeeehhhhhhhHHHHhhhhhhcCCcccccchhhHHHHHHHHHHHH
Q 025040          159 LCIGRFSA-TSFQVLGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYS  211 (259)
Q Consensus       159 ~~l~~~~~-~~~si~~~~~pv~~~~~s~~~~~e~~s~~~~~G~~lii~g~~~~~  211 (259)
                      .++++++. +..++..-+..+.+.+.|+++|+|++++.+++|+.+++.|++.-+
T Consensus        48 ~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~  101 (105)
T PRK11431         48 WAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLK  101 (105)
T ss_pred             HHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhh
Confidence            35666654 345677788899999999999999999999999999999998864

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=96.76  E-value=0.00032  Score=51.22  Aligned_cols=60  Identities=13%  Similarity=0.103  Sum_probs=52.0

Q ss_pred             ceeeeeeeecccchhHHHHH-hhhhHHHHHHHHHHHhccccChhhhhhhhheeecceeeee
Q 025040            2 SIAGMNFSLMLNSVGFYQIS-KLSMIPVVCVMEWILHNKHYSKEVKMAVVVVVIGVGVCTI   61 (259)
Q Consensus         2 ~~~~~n~al~~~~~~~~~~l-~~~~p~~~~l~~~l~~~~~~~~~~~~~~~l~~~Gv~l~~~   61 (259)
                      |+.+...+++++|++.+..+ .....+.+.+++.+++||+++..+++++.+.++|++.+..
T Consensus        43 sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l  103 (120)
T PRK10452         43 SYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKS  103 (120)
T ss_pred             HHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhc
Confidence            34455668899999988877 4689999999999999999999999999999999988754

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=96.68  E-value=0.075  Score=45.66  Aligned_cols=70  Identities=16%  Similarity=0.281  Sum_probs=61.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHhcccCceeeehhhhhhhHHHHhhhhhhcCCcccccchhhHHHHHHHHHHHH
Q 025040          142 FIFLSCALAVFCNVSQYLCIGRFSATSFQVLGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYS  211 (259)
Q Consensus       142 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~si~~~~~pv~~~~~s~~~~~e~~s~~~~~G~~lii~g~~~~~  211 (259)
                      -....++.-.+.|...|..+.+.+|.+..+...++...+.+++.++++++++..||...++...|+.+..
T Consensus        94 k~~vPa~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ  163 (345)
T KOG2234|consen   94 KVSVPALIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQ  163 (345)
T ss_pred             HHHHHHHHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHh
Confidence            3444455556667777888999999999999999999999999999999999999999999999999866

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=96.59  E-value=0.0083  Score=43.04  Aligned_cols=52  Identities=25%  Similarity=0.558  Sum_probs=42.5

Q ss_pred             HhcccCc-eeeehhhhhhhHHHHhhhhhhcCCcccccchhhHHHHHHHHHHHH
Q 025040          160 CIGRFSA-TSFQVLGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYS  211 (259)
Q Consensus       160 ~l~~~~~-~~~si~~~~~pv~~~~~s~~~~~e~~s~~~~~G~~lii~g~~~~~  211 (259)
                      ++++++. +..++..-+..+.+.+.++++|+|++++.+++|+.+++.|+...+
T Consensus        55 al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~lk  107 (109)
T PRK10650         55 AVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMIK  107 (109)
T ss_pred             HHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhc
Confidence            4566543 334666777888889999999999999999999999999998753

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=96.55  E-value=0.028  Score=46.89  Aligned_cols=80  Identities=16%  Similarity=0.304  Sum_probs=62.1

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHhcccCceeeehhh-hhhhHHHHhhhhhhcCCcccccchh----hHHHHHHHHHHHH
Q 025040          137 SGAILFIFLSCALAVFCNVSQYLCIGRFSATSFQVLG-HMKTVCVLTLGWLLFDSALTFKNIS----GMILAVVGMVIYS  211 (259)
Q Consensus       137 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~si~~-~~~pv~~~~~s~~~~~e~~s~~~~~----G~~lii~g~~~~~  211 (259)
                      ...++..+++|++=.+.+...+...++.+...+-.++ -++-+.+.++++++|||.-+..+++    +.+++++|+++.+
T Consensus        42 ~~~~~~~~lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~gv~~fgEW~~~~~~~~G~~Al~liiiGv~lts  121 (269)
T PF06800_consen   42 GTSFIVAFLSGAFWAIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSLIGVLFFGEWTTTTQKIIGFLALVLIIIGVILTS  121 (269)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhcceeeeccchhHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHhc
Confidence            4666677788887777888888888998888777666 5667778999999999987766654    7888899998877


Q ss_pred             HHhhH
Q 025040          212 WAVEA  216 (259)
Q Consensus       212 ~~~~~  216 (259)
                      +.+++
T Consensus       122 ~~~~~  126 (269)
T PF06800_consen  122 YQDKK  126 (269)
T ss_pred             ccccc
Confidence            65543

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=96.37  E-value=0.00074  Score=48.61  Aligned_cols=58  Identities=12%  Similarity=0.175  Sum_probs=50.0

Q ss_pred             eeeeeeecccchhHHHHH-hhhhHHHHHHHHHHHhccccChhhhhhhhheeecceeeee
Q 025040            4 AGMNFSLMLNSVGFYQIS-KLSMIPVVCVMEWILHNKHYSKEVKMAVVVVVIGVGVCTI   61 (259)
Q Consensus         4 ~~~n~al~~~~~~~~~~l-~~~~p~~~~l~~~l~~~~~~~~~~~~~~~l~~~Gv~l~~~   61 (259)
                      .+-..+++++|++.+..+ .....+.+.+.+++++||++++.+++++.+.++|++.+..
T Consensus        45 ~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l  103 (110)
T PRK09541         45 WLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINL  103 (110)
T ss_pred             HHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence            344567889999988877 4588999999999999999999999999999999988743

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=96.34  E-value=0.012  Score=50.28  Aligned_cols=117  Identities=18%  Similarity=0.185  Sum_probs=76.7

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHhhhhHHHHHHHHHHHhhhhhccCcccccccCchhHHHHHHHH
Q 025040           67 NAKGFLCACVAVLSTSLQQITIGSLQKKYSIGSFELLSKTAPIQAVSLLVLGPFVDYYLNGKFITTYKMTSGAILFIFLS  146 (259)
Q Consensus        67 ~~~G~~~~l~a~l~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  146 (259)
                      ...|+.+++.++++.+...+++|+-.++.+....+--  .   ..     . .              .+....|+..+..
T Consensus         5 ~~iGv~lav~ss~~~~~g~~lqk~~~~r~~~~~~~~~--~---~~-----~-~--------------~l~~~~W~~G~~~   59 (300)
T PF05653_consen    5 FYIGVLLAVVSSIFIAVGFNLQKKSHLRLPRGSLRAG--S---GG-----R-S--------------YLRRPLWWIGLLL   59 (300)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccc--c---hh-----h-H--------------HHhhHHHHHHHHH
Confidence            3579999999999999999999986543221111000  0   00     0 0              0001111222222


Q ss_pred             HHHHHHHHHHHHHHhcccCceeeehhhhhhhHHHHhhhhhhcCCcccccchhhHHHHHHHHHHHH
Q 025040          147 CALAVFCNVSQYLCIGRFSATSFQVLGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYS  211 (259)
Q Consensus       147 ~~~~~~~~~~~~~~l~~~~~~~~si~~~~~pv~~~~~s~~~~~e~~s~~~~~G~~lii~g~~~~~  211 (259)
                      ...+-..   .+.++...++...+.++.+.-++..+++.++++|+++..++.|.++++.|..+..
T Consensus        60 ~~~g~~~---~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv  121 (300)
T PF05653_consen   60 MVLGEIL---NFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIV  121 (300)
T ss_pred             HhcchHH---HHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeE
Confidence            2222233   2335666777778888888899999999999999999999999999999987754

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=96.20  E-value=0.00035  Score=56.57  Aligned_cols=191  Identities=14%  Similarity=0.154  Sum_probs=126.8

Q ss_pred             eeecccchhHHHHH-hhhhHHHHHHHHHHHhccccChhhh----hhhhheeecceeeeecccc--------cchHHHHHH
Q 025040            8 FSLMLNSVGFYQIS-KLSMIPVVCVMEWILHNKHYSKEVK----MAVVVVVIGVGVCTITDVK--------VNAKGFLCA   74 (259)
Q Consensus         8 ~al~~~~~~~~~~l-~~~~p~~~~l~~~l~~~~~~~~~~~----~~~~l~~~Gv~l~~~~~~~--------~~~~G~~~~   74 (259)
                      -|+++++++.+.=+ ..+.-+-+.+++++.+||=.+..+.    +++++.+.|+++-+..|.+        ..-.|+...
T Consensus        78 ka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs~~~~~nk~~~~~~n~kkgi~~L  157 (288)
T COG4975          78 KAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLTSKQDRNNKEEENPSNLKKGIVIL  157 (288)
T ss_pred             hheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEeeeeccccccccChHhhhhheeee
Confidence            35666666554332 3455667788899999998877664    5778888999998877631        123688888


Q ss_pred             HHHHHHHHHHHHHHHHHHhhcCCCHHHHHHhhhhHHHHHHHHHHHhhhhhccCcccccccCchhHHHHHHHHHHHHHHHH
Q 025040           75 CVAVLSTSLQQITIGSLQKKYSIGSFELLSKTAPIQAVSLLVLGPFVDYYLNGKFITTYKMTSGAILFIFLSCALAVFCN  154 (259)
Q Consensus        75 l~a~l~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (259)
                      +.+.+.|-.|.+..+.    .++|-++...-++.    .+...+..+...-..      .......+.-...|+.=...|
T Consensus       158 ~iSt~GYv~yvvl~~~----f~v~g~saiLPqAi----GMv~~ali~~~~~~~------~~~~K~t~~nii~G~~Wa~GN  223 (288)
T COG4975         158 LISTLGYVGYVVLFQL----FDVDGLSAILPQAI----GMVIGALILGFFKME------KRFNKYTWLNIIPGLIWAIGN  223 (288)
T ss_pred             eeeccceeeeEeeecc----ccccchhhhhHHHH----HHHHHHHHHhhcccc------cchHHHHHHHHhhHHHHHhhH
Confidence            8899999999888853    34566666555532    222222222111000      111122234555666666677


Q ss_pred             HHHHHHhcccCceeeehhhhhhhHHHHhhhhhhcCCcccccc----hhhHHHHHHHHHHHHH
Q 025040          155 VSQYLCIGRFSATSFQVLGHMKTVCVLTLGWLLFDSALTFKN----ISGMILAVVGMVIYSW  212 (259)
Q Consensus       155 ~~~~~~l~~~~~~~~si~~~~~pv~~~~~s~~~~~e~~s~~~----~~G~~lii~g~~~~~~  212 (259)
                      ..++.+-++.+..+.=.++-+.-+++++=++++++|+-|..+    ++|.++++.|..+...
T Consensus       224 l~ml~a~~~~GvAt~FSlSQlgViisTiGGIl~L~ekKtkkEm~~v~iGiilivvgai~lg~  285 (288)
T COG4975         224 LFMLLAAQKVGVATSFSLSQLGVIISTIGGILFLGEKKTKKEMVYVIIGIILIVVGAILLGI  285 (288)
T ss_pred             HHHHHhhhhhceeeeeeHhhheeeeeecceEEEEeccCchhhhhhhhhhHHHHHHHhhhhhe
Confidence            878888888888888788888899999999999999988665    4677788877766543

>PRK11431 multidrug efflux system protein; Provisional

Probab=96.12  E-value=0.0014  Score=46.69  Aligned_cols=56  Identities=11%  Similarity=-0.005  Sum_probs=47.4

Q ss_pred             eeeeeecccchhHHHHHh-hhhHHHHHHHHHHHhccccChhhhhhhhheeecceeee
Q 025040            5 GMNFSLMLNSVGFYQISK-LSMIPVVCVMEWILHNKHYSKEVKMAVVVVVIGVGVCT   60 (259)
Q Consensus         5 ~~n~al~~~~~~~~~~l~-~~~p~~~~l~~~l~~~~~~~~~~~~~~~l~~~Gv~l~~   60 (259)
                      +-..+++.+|++++..+- ....+.+.+.+++++||++++.+++++.+.++|++.+-
T Consensus        45 ~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~  101 (105)
T PRK11431         45 LLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLK  101 (105)
T ss_pred             HHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhh
Confidence            334577888888766554 48899999999999999999999999999999998763

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=96.03  E-value=0.0037  Score=47.53  Aligned_cols=55  Identities=15%  Similarity=0.146  Sum_probs=50.7

Q ss_pred             eeeeecccchhHHHHHhhhhHHHHHHHHHHHhccccChhhhhhhhheeecceeee
Q 025040            6 MNFSLMLNSVGFYQISKLSMIPVVCVMEWILHNKHYSKEVKMAVVVVVIGVGVCT   60 (259)
Q Consensus         6 ~n~al~~~~~~~~~~l~~~~p~~~~l~~~l~~~~~~~~~~~~~~~l~~~Gv~l~~   60 (259)
                      ++..++++|+-+++++.....+.+.+++.++++|+++..++.|++++++|+++..
T Consensus        98 ~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ys  152 (153)
T PF03151_consen   98 SFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYS  152 (153)
T ss_pred             HHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheee
Confidence            4557789999999999999999999999999999999999999999999998754

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=96.01  E-value=0.0017  Score=46.63  Aligned_cols=54  Identities=11%  Similarity=0.137  Sum_probs=46.0

Q ss_pred             eeeeecccchhHHHHH-hhhhHHHHHHHHHHHhccccChhhhhhhhheeecceee
Q 025040            6 MNFSLMLNSVGFYQIS-KLSMIPVVCVMEWILHNKHYSKEVKMAVVVVVIGVGVC   59 (259)
Q Consensus         6 ~n~al~~~~~~~~~~l-~~~~p~~~~l~~~l~~~~~~~~~~~~~~~l~~~Gv~l~   59 (259)
                      -..+++++|++++..+ .....+.+.+.+++++||++++.+++++.+.+.|++.+
T Consensus        52 Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~l  106 (109)
T PRK10650         52 LSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMI  106 (109)
T ss_pred             HHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHh
Confidence            3457788898876655 45888999999999999999999999999999998764

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=95.89  E-value=0.016  Score=40.37  Aligned_cols=45  Identities=20%  Similarity=0.313  Sum_probs=24.6

Q ss_pred             HHhcccCceee-ehhhhhhhHHHHhhhhhhcCCcccccchhhHHHH
Q 025040          159 LCIGRFSATSF-QVLGHMKTVCVLTLGWLLFDSALTFKNISGMILA  203 (259)
Q Consensus       159 ~~l~~~~~~~~-si~~~~~pv~~~~~s~~~~~e~~s~~~~~G~~li  203 (259)
                      .++++.+...+ .+...+..+.+.+.|+++|||++|..+++|+.++
T Consensus        48 ~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI   93 (93)
T PF00893_consen   48 LALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI   93 (93)
T ss_dssp             HHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred             HHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence            46777665554 5566788889999999999999999999999875

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=95.48  E-value=0.004  Score=44.10  Aligned_cols=55  Identities=13%  Similarity=0.060  Sum_probs=46.8

Q ss_pred             eeeeecccchhHHHH-HhhhhHHHHHHHHHHHhccccChhhhhhhhheeecceeee
Q 025040            6 MNFSLMLNSVGFYQI-SKLSMIPVVCVMEWILHNKHYSKEVKMAVVVVVIGVGVCT   60 (259)
Q Consensus         6 ~n~al~~~~~~~~~~-l~~~~p~~~~l~~~l~~~~~~~~~~~~~~~l~~~Gv~l~~   60 (259)
                      --.+++++|++++.. -.....+.+++.+++++||+.+..+++++.+.++|++.+-
T Consensus        47 Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk  102 (106)
T COG2076          47 LSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLK  102 (106)
T ss_pred             HHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhh
Confidence            345778899887554 4678899999999999999999999999999999988653

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=95.36  E-value=0.011  Score=48.32  Aligned_cols=53  Identities=8%  Similarity=-0.052  Sum_probs=47.8

Q ss_pred             eeeeeecccchhHHHHHhhhhHHHHHHHHHHHhccccChhhhhhhhheeecce
Q 025040            5 GMNFSLMLNSVGFYQISKLSMIPVVCVMEWILHNKHYSKEVKMAVVVVVIGVG   57 (259)
Q Consensus         5 ~~n~al~~~~~~~~~~l~~~~p~~~~l~~~l~~~~~~~~~~~~~~~l~~~Gv~   57 (259)
                      +..+++..++...+.++.++.|.+.++.++++++|+++..||.++...+++..
T Consensus       226 LEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsa  278 (292)
T COG5006         226 LEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASA  278 (292)
T ss_pred             HHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHh
Confidence            34567889999999999999999999999999999999999999988877654

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=95.23  E-value=0.0072  Score=42.17  Aligned_cols=49  Identities=8%  Similarity=-0.058  Sum_probs=27.2

Q ss_pred             eeeeeeeecccchhHHHHH-hhhhHHHHHHHHHHHhccccChhhhhhhhh
Q 025040            3 IAGMNFSLMLNSVGFYQIS-KLSMIPVVCVMEWILHNKHYSKEVKMAVVV   51 (259)
Q Consensus         3 ~~~~n~al~~~~~~~~~~l-~~~~p~~~~l~~~l~~~~~~~~~~~~~~~l   51 (259)
                      +.+...+++++|.+.+.-+ .....+.+.+.+.+++||+++..|+.++.+
T Consensus        43 ~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~l   92 (93)
T PF00893_consen   43 FYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGL   92 (93)
T ss_dssp             HHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHH
T ss_pred             HHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheee
Confidence            3455668899999988665 569999999999999999999999999875

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=95.05  E-value=0.025  Score=46.16  Aligned_cols=131  Identities=17%  Similarity=0.198  Sum_probs=82.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHhhhhHHHHHHHHHHHhhhhhccCcccccccCchhHHHHHHHHHHH
Q 025040           70 GFLCACVAVLSTSLQQITIGSLQKKYSIGSFELLSKTAPIQAVSLLVLGPFVDYYLNGKFITTYKMTSGAILFIFLSCAL  149 (259)
Q Consensus        70 G~~~~l~a~l~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (259)
                      +++.+++-++.|+.......+    .+-+|.+...- +.++++...+...++         .+...+...+..-+.+|+.
T Consensus         3 ~~liaL~P~l~WGsip~v~~k----~GG~p~qQ~lG-tT~GALifaiiv~~~---------~~p~~T~~~~iv~~isG~~   68 (288)
T COG4975           3 DLLIALLPALGWGSIPLVANK----FGGKPYQQTLG-TTLGALIFAIIVFLF---------VSPELTLTIFIVGFISGAF   68 (288)
T ss_pred             hHHHHHHHHHHhcccceeeee----cCCChhHhhhh-ccHHHHHHHHHHhee---------ecCccchhhHHHHHHhhhH
Confidence            567888889999877666643    23345544432 233444333332221         1112344455566666666


Q ss_pred             HHHHHHHHHHHhcccCceeeehhh-hhhhHHHHhhhhhhcCCcccccch----hhHHHHHHHHHHHHHHh
Q 025040          150 AVFCNVSQYLCIGRFSATSFQVLG-HMKTVCVLTLGWLLFDSALTFKNI----SGMILAVVGMVIYSWAV  214 (259)
Q Consensus       150 ~~~~~~~~~~~l~~~~~~~~si~~-~~~pv~~~~~s~~~~~e~~s~~~~----~G~~lii~g~~~~~~~~  214 (259)
                      =.+.+...+...+..+...+..++ -.+-+-+.+++++.|||--+..++    +.+++++.|+++.++.+
T Consensus        69 Ws~GQ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs~~~  138 (288)
T COG4975          69 WSFGQANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLTSKQD  138 (288)
T ss_pred             hhhhhhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEeeeec
Confidence            556677777888887777766555 467788899999999997776654    45677888887765543

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=94.57  E-value=0.022  Score=49.22  Aligned_cols=75  Identities=15%  Similarity=0.259  Sum_probs=65.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhcccCceeeehhhhhhhHHHHhhhhhhcCCcccccchhhHHHHHHHHHHHHHHhh
Q 025040          141 LFIFLSCALAVFCNVSQYLCIGRFSATSFQVLGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYSWAVE  215 (259)
Q Consensus       141 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~si~~~~~pv~~~~~s~~~~~e~~s~~~~~G~~lii~g~~~~~~~~~  215 (259)
                      ...+..+..=+..|+....++++++....++++.....++..+|.++-+|++|..++++..+.+.|+++.+..+.
T Consensus       160 k~sl~fc~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s  234 (416)
T KOG2765|consen  160 KLSLFFCPLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDS  234 (416)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEeccc
Confidence            344555555666788888899999999999999999999999999999999999999999999999999876543

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=94.49  E-value=0.073  Score=43.21  Aligned_cols=60  Identities=15%  Similarity=0.268  Sum_probs=50.7

Q ss_pred             HHHHHhcccCceeeehhhhhhhHHHHhhhhhhcCCcccccchhhHHHHHHHHHHHHHHhh
Q 025040          156 SQYLCIGRFSATSFQVLGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYSWAVE  215 (259)
Q Consensus       156 ~~~~~l~~~~~~~~si~~~~~pv~~~~~s~~~~~e~~s~~~~~G~~lii~g~~~~~~~~~  215 (259)
                      +...++++++=.+.-+--..+|+-..++|+++.+.+.++....-..+|++|+.++.+..+
T Consensus       101 ssN~Alq~vpYPTqVlgKScKPIPVMilGVl~~~KsY~w~kY~cVL~IV~GValFmYK~~  160 (337)
T KOG1580|consen  101 SSNQALQYVPYPTQVLGKSCKPIPVMILGVLFAHKSYHWRKYCCVLMIVVGVALFMYKEN  160 (337)
T ss_pred             hccchhcccCCcHHHhcccCCCcceeeeehhhhcccccHHHHHHHHHHHHHHHHhhcccc
Confidence            345567777766666677889999999999999999999999999999999999887543

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=93.86  E-value=0.16  Score=36.55  Aligned_cols=53  Identities=21%  Similarity=0.380  Sum_probs=43.1

Q ss_pred             HHHHhcccCceeeehh-hhhhhHHHHhhhhhhcCCcccccchhhHHHHHHHHHH
Q 025040          157 QYLCIGRFSATSFQVL-GHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVI  209 (259)
Q Consensus       157 ~~~~l~~~~~~~~si~-~~~~pv~~~~~s~~~~~e~~s~~~~~G~~lii~g~~~  209 (259)
                      +++.+++.+-+.+..+ +.+.=+++.+.++++.+|..+...++|+++++.|+.+
T Consensus        58 f~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~L  111 (113)
T PF10639_consen   58 FFLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVAL  111 (113)
T ss_pred             HHHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeee
Confidence            4456777776666555 5888889999998888888899999999999999764

Many members are annotated as potential transmembrane proteins.

>PF07168 Ureide_permease: Ureide permease; InterPro: IPR009834 This entry represents ureide permease, which transports a wide spectrum of oxo derivatives of heterocyclic nitrogen compounds, including allantoin, uric acid and xanthine, but not adenine

Probab=92.75  E-value=0.39  Score=40.54  Aligned_cols=137  Identities=15%  Similarity=0.131  Sum_probs=68.5

Q ss_pred             HHHHHHHHHHHHHHHHHHhhcCCCHHHHHHhhhhHHHHHHHHHHHhh-hhhcc----C-cccccc-cCchhHHHHHHHHH
Q 025040           75 CVAVLSTSLQQITIGSLQKKYSIGSFELLSKTAPIQAVSLLVLGPFV-DYYLN----G-KFITTY-KMTSGAILFIFLSC  147 (259)
Q Consensus        75 l~a~l~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~----~-~~~~~~-~~~~~~~~~~~~~~  147 (259)
                      +++.+||+.+...+|-.-|+.+.+  +..+|=..++.+.......+. +..-.    + .+..+. +.+...+...+..|
T Consensus         2 ~itmlcwGSW~nt~kL~~r~gR~~--qh~Y~DYsig~lL~All~A~TlGs~G~~~~~g~~Fl~qL~Q~n~~sv~~A~aGG   79 (336)
T PF07168_consen    2 VITMLCWGSWPNTQKLAERRGRLP--QHFYWDYSIGNLLAALLIAFTLGSIGESTPEGPNFLTQLSQANWPSVLFAMAGG   79 (336)
T ss_pred             eeehhhhcChHHHHHHHHhcCCcc--ceehhHHHHHHHHHHHHHHHhccccCCCCCCCccHHHHHhcCChHHHHHHHHhh
Confidence            467889988888777665543332  223333333444333332222 21110    1 111121 23345556667777


Q ss_pred             HHHHHHHHHHHHHhcccCceeeehhh-hhhhHHHHhhhhhhcCCccc--ccchhhHHHHHHHHHHHHHHh
Q 025040          148 ALAVFCNVSQYLCIGRFSATSFQVLG-HMKTVCVLTLGWLLFDSALT--FKNISGMILAVVGMVIYSWAV  214 (259)
Q Consensus       148 ~~~~~~~~~~~~~l~~~~~~~~si~~-~~~pv~~~~~s~~~~~e~~s--~~~~~G~~lii~g~~~~~~~~  214 (259)
                      ++--+.|+..-+.+...+-..+-.++ .+.-++++++-|++ +.+.+  ..-+-|.+++++++++-....
T Consensus        80 vvfnlgNillq~aia~aGmSVafpvg~glalVlGv~~NYfl-d~~~n~a~iLF~GV~cf~iAI~lga~ah  148 (336)
T PF07168_consen   80 VVFNLGNILLQAAIAFAGMSVAFPVGIGLALVLGVTLNYFL-DPKINRAEILFPGVACFLIAIILGAAAH  148 (336)
T ss_pred             HhhhhHHHHHHHHHHHhcceeeeeeecceEEEEeeeeeeec-cCCCCCceEEEccHHHHHHHHHHHHHHH
Confidence            77777777766555554433222222 23333445555544 44444  355668888887777654433

Transport is dependent on glucose and a proton gradient [].

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=92.72  E-value=0.031  Score=40.26  Aligned_cols=53  Identities=13%  Similarity=0.273  Sum_probs=44.0

Q ss_pred             eeeecccchhHHHHH-hhhhHHHHHHHHHHHhccccChhhhhhhhheeecceee
Q 025040            7 NFSLMLNSVGFYQIS-KLSMIPVVCVMEWILHNKHYSKEVKMAVVVVVIGVGVC   59 (259)
Q Consensus         7 n~al~~~~~~~~~~l-~~~~p~~~~l~~~l~~~~~~~~~~~~~~~l~~~Gv~l~   59 (259)
                      ++.+...+.|.+.-+ +++.=+||++.++++.+|..+++.++|+.+.+.|+.+.
T Consensus        59 ~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~Lc  112 (113)
T PF10639_consen   59 FLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVALC  112 (113)
T ss_pred             HHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeeee
Confidence            345566677766666 58888999999999988888999999999999999875

Many members are annotated as potential transmembrane proteins.

>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]

Probab=88.92  E-value=0.11  Score=41.10  Aligned_cols=62  Identities=21%  Similarity=0.266  Sum_probs=54.4

Q ss_pred             HHHHHHHHhcccCceeeehhhhhhhHHHHhhhhhhcCCcccccchhhHHHHHHHHHHHHHHh
Q 025040          153 CNVSQYLCIGRFSATSFQVLGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYSWAV  214 (259)
Q Consensus       153 ~~~~~~~~l~~~~~~~~si~~~~~pv~~~~~s~~~~~e~~s~~~~~G~~lii~g~~~~~~~~  214 (259)
                      .|+.+..++++++|+.++.+..-+..+..+++++.+++++....++..++.+.|+++..+..
T Consensus        66 aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~D  127 (290)
T KOG4314|consen   66 ANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYAD  127 (290)
T ss_pred             CCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEecc
Confidence            35555667999999999999999999999999999999999999999999999988866544

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=88.54  E-value=0.27  Score=42.22  Aligned_cols=65  Identities=9%  Similarity=0.095  Sum_probs=47.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhcccCceeeehhhhhhhHHHHhhhhhhcCCcccccchhhHHHHHH
Q 025040          141 LFIFLSCALAVFCNVSQYLCIGRFSATSFQVLGHMKTVCVLTLGWLLFDSALTFKNISGMILAVV  205 (259)
Q Consensus       141 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~si~~~~~pv~~~~~s~~~~~e~~s~~~~~G~~lii~  205 (259)
                      .-++-.+++..+........+++.+...+-++-.++|+++.++++++.+|+.+...+..++.++.
T Consensus        84 ~~llpl~~~~~~~~v~~n~Sl~~v~VsF~q~iKa~~P~~tvl~~~~~~~~~~s~~~~lsL~piv~  148 (316)
T KOG1441|consen   84 RTLLPLGLVFCISHVLGNVSLSYVPVSFYQTIKALMPPFTVLLSVLLLGKTYSSMTYLSLLPIVF  148 (316)
T ss_pred             HHHHHHHHHHHHHHHhcchhhhccchhHHHHHHhhcchhHHHHHHHHhCCCCcceEEEEEEEeee
Confidence            34455555555555556667899999999999999999999999999999977644443333333

>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family

Probab=88.31  E-value=7.1  Score=33.82  Aligned_cols=141  Identities=11%  Similarity=0.125  Sum_probs=67.6

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHhhhhHHHHHHHHHHHhhhhhc-cCccccc-ccCchhHHHHHHH
Q 025040           68 AKGFLCACVAVLSTSLQQITIGSLQKKYSIGSFELLSKTAPIQAVSLLVLGPFVDYYL-NGKFITT-YKMTSGAILFIFL  145 (259)
Q Consensus        68 ~~G~~~~l~a~l~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~  145 (259)
                      ..|+++..++++|.+.+.+-.||..   +.+ ++..-..   +.+...+..|...... ..+..+. ...+...+....+
T Consensus         6 i~Gii~h~iGg~~~~sfy~P~kkvk---~Ws-WEs~Wlv---~gi~swli~P~~~a~l~ip~~~~i~~~~~~~~l~~~~l   78 (344)
T PF06379_consen    6 ILGIIFHAIGGFASGSFYVPFKKVK---GWS-WESYWLV---QGIFSWLIVPWLWALLAIPDFFSIYSATPASTLFWTFL   78 (344)
T ss_pred             HHHHHHHHHHHHHhhhhccchhhcC---Ccc-HHHHHHH---HHHHHHHHHHHHHHHHhCCcHHHHHHhCChhHHHHHHH
Confidence            4799999999999999999888653   222 2222111   2223333333321111 1111111 1122222222222


Q ss_pred             HHHHHHHHHHHHHHHhcccCce-eeehhhhhhhHHHHhhhhhh-------cCCcccccchhhHHHHHHHHHHHHHHhh
Q 025040          146 SCALAVFCNVSQYLCIGRFSAT-SFQVLGHMKTVCVLTLGWLL-------FDSALTFKNISGMILAVVGMVIYSWAVE  215 (259)
Q Consensus       146 ~~~~~~~~~~~~~~~l~~~~~~-~~si~~~~~pv~~~~~s~~~-------~~e~~s~~~~~G~~lii~g~~~~~~~~~  215 (259)
                      .|+.=-+.....-..+++++-. ..++..-+..++++++--++       ++++-....++|.+++++|+.+..+.-.
T Consensus        79 ~G~lWGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~AG~  156 (344)
T PF06379_consen   79 FGVLWGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKAGS  156 (344)
T ss_pred             HHHHHhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHHHH
Confidence            2222111122122245555432 23333334444444443333       3334456789999999999999876643

This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=87.58  E-value=3.1  Score=35.33  Aligned_cols=137  Identities=11%  Similarity=0.074  Sum_probs=89.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHh-hcC------CCHHHHHHhhhhHHHHHHHHHHHhhhhhccCcccccccCchhHHHH
Q 025040           70 GFLCACVAVLSTSLQQITIGSLQK-KYS------IGSFELLSKTAPIQAVSLLVLGPFVDYYLNGKFITTYKMTSGAILF  142 (259)
Q Consensus        70 G~~~~l~a~l~~a~~~v~~~~~~~-~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  142 (259)
                      ..++...-...+-.+.++++++.. +++      -++.-+.+.+...+.+....+   .... .. .    ......|+-
T Consensus        15 L~~c~~GI~~t~l~~gVlQEki~T~~y~~~~~rF~~~~fL~~~q~l~~~~~s~~~---l~~~-k~-~----~~~~apl~~   85 (327)
T KOG1581|consen   15 LVFCFSGIYATFLTWGVLQEKIMTRPYGEDGERFEHSLFLVFCQRLVALLVSYAM---LKWW-KK-E----LSGVAPLYK   85 (327)
T ss_pred             HHHHHHHHHHHHHHHHHHhcceeecccCcccccccccHHHHHHHHHHHHHHHHHH---Hhcc-cc-c----CCCCCchhH
Confidence            334444444455677888888763 331      244445555654443333222   1111 00 1    111222334


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCceeeehhhhhhhHHHHhhhhhhcCCcccccchhhHHHHHHHHHHHHHHhh
Q 025040          143 IFLSCALAVFCNVSQYLCIGRFSATSFQVLGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYSWAVE  215 (259)
Q Consensus       143 ~~~~~~~~~~~~~~~~~~l~~~~~~~~si~~~~~pv~~~~~s~~~~~e~~s~~~~~G~~lii~g~~~~~~~~~  215 (259)
                      .-..++.......+.|-++++++=.+..+.-.-+-+-..+++.++++.+.+....+-..++-.|+.++...++
T Consensus        86 y~~is~tn~~s~~~~yeaLKyvSyPtq~LaKscKmIPVmlmg~Lvy~~ky~~~eYl~~~LIs~GvsiF~l~~~  158 (327)
T KOG1581|consen   86 YSLISFTNTLSSWCGYEALKYVSYPTQTLAKSCKMIPVMLMGTLVYGRKYSSFEYLVAFLISLGVSIFSLFPN  158 (327)
T ss_pred             HhHHHHHhhcchHHHHHHHHhccchHHHHHHHhhhhHHHHHHHHHhcCccCcHHHHHHHHHHhheeeEEEecC
Confidence            4455555666666678889999988888999999999999999999999999999999999999998877654

>KOG2922 consensus Uncharacterized conserved protein [Function unknown]

Probab=85.07  E-value=0.36  Score=41.08  Aligned_cols=118  Identities=15%  Similarity=0.079  Sum_probs=79.1

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHhhhhHHHHHHHHHHHhhhhhccCcccccccCchhHHHHHHHH
Q 025040           67 NAKGFLCACVAVLSTSLQQITIGSLQKKYSIGSFELLSKTAPIQAVSLLVLGPFVDYYLNGKFITTYKMTSGAILFIFLS  146 (259)
Q Consensus        67 ~~~G~~~~l~a~l~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  146 (259)
                      +..|.++++.+++..+...++.|+-.++...     ..-.                  ... ...+ ....+.|+..++.
T Consensus        19 ~~~G~~LaissS~~Ig~sfilkKkgl~r~~~-----~~~r------------------a~~-gg~~-yl~~~~Ww~G~lt   73 (335)
T KOG2922|consen   19 NIIGLVLAISSSIFIGSSFILKKKGLKRAGA-----SGLR------------------AGE-GGYG-YLKEPLWWAGMLT   73 (335)
T ss_pred             ceeeeeehhhccEEEeeehhhhHHHHHHHhh-----hccc------------------ccC-CCcc-hhhhHHHHHHHHH
Confidence            4568888888888777777777765543211     0000                  000 0000 1122444555555


Q ss_pred             HHHHHHHHHHHHHHhcccCceeeehhhhhhhHHHHhhhhhhcCCcccccchhhHHHHHHHHHHHHH
Q 025040          147 CALAVFCNVSQYLCIGRFSATSFQVLGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYSW  212 (259)
Q Consensus       147 ~~~~~~~~~~~~~~l~~~~~~~~si~~~~~pv~~~~~s~~~~~e~~s~~~~~G~~lii~g~~~~~~  212 (259)
                      -..+=+.|+..   ....++...+.++.+.-+...+++.++++|+++....+|++++++|..+...
T Consensus        74 m~vGei~NFaA---YaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~  136 (335)
T KOG2922|consen   74 MIVGEIANFAA---YAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVI  136 (335)
T ss_pred             HHHHhHhhHHH---HhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEE
Confidence            55565666654   4566788888889999999999999999999999999999999999876543

>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=84.43  E-value=25  Score=30.12  Aligned_cols=134  Identities=15%  Similarity=0.106  Sum_probs=79.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcCCCHH-HHHHhhhhHHHHHHHHHHHhhhhhccCcccccccCchhHHHHHHHHHHH
Q 025040           71 FLCACVAVLSTSLQQITIGSLQKKYSIGSF-ELLSKTAPIQAVSLLVLGPFVDYYLNGKFITTYKMTSGAILFIFLSCAL  149 (259)
Q Consensus        71 ~~~~l~a~l~~a~~~v~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (259)
                      ...++.-+++.....+..|.....++.+.. .+..++++.+.+.+...-..  ..   ...++..+...  .-..-..+.
T Consensus        14 l~sa~~Y~~sS~lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk~~--~l---v~~~~l~~~~~--kk~~P~~~l   86 (314)
T KOG1444|consen   14 LLSALFYCLSSILMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLKRL--GL---VNFRPLDLRTA--KKWFPVSLL   86 (314)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHh--ce---eecCCcChHHH--HHHccHHHH
Confidence            444555555555666666776666665443 23335554444443332211  11   11122222211  000111111


Q ss_pred             HHHHHHHHHHHhcccCceeeehhhhhhhHHHHhhhhhhcCCcccccchhhHHHHHHHHHHHH
Q 025040          150 AVFCNVSQYLCIGRFSATSFQVLGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYS  211 (259)
Q Consensus       150 ~~~~~~~~~~~l~~~~~~~~si~~~~~pv~~~~~s~~~~~e~~s~~~~~G~~lii~g~~~~~  211 (259)
                      -+..-++.-..+++++.....+...+.|+.+.+....+++.+++..-+.....+++|...+.
T Consensus        87 f~~~i~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~  148 (314)
T KOG1444|consen   87 FVGMLFTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAA  148 (314)
T ss_pred             HHHHHHHccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhc
Confidence            22222233346899999999999999999999999999999999999999999999987754

>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=81.45  E-value=2.5  Score=35.43  Aligned_cols=53  Identities=19%  Similarity=0.381  Sum_probs=45.9

Q ss_pred             HHHHhcccCceeeehhhhhhhHHHHhhhhhhcCCcccccchhhHHHHHHHHHH
Q 025040          157 QYLCIGRFSATSFQVLGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVI  209 (259)
Q Consensus       157 ~~~~l~~~~~~~~si~~~~~pv~~~~~s~~~~~e~~s~~~~~G~~lii~g~~~  209 (259)
                      -.+++++.+....-+-..+..++++++++++++++-+..-..++.+|+.|..+
T Consensus       119 nnlcL~yVgVaFYyvgRsLttvFtVlLtyvllkqkTs~~~~~~C~lIi~GF~l  171 (347)
T KOG1442|consen  119 NNLCLKYVGVAFYYVGRSLTTVFTVLLTYVLLKQKTSFFALGCCLLIILGFGL  171 (347)
T ss_pred             cceehhhcceEEEEeccchhhhHHHHhHHhhcccccccccceeehhheehhee
Confidence            34578999999999999999999999999999999888888888887777654

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	259
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	98.74
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	98.23
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	98.02
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	97.94

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=98.74  E-value=1e-08  Score=75.82  Aligned_cols=61  Identities=18%  Similarity=0.251  Sum_probs=43.4

Q ss_pred             HHHHHHHHhcccCceeeehh-hhhhhHHHHhhhhhhcCCcccccchhhHHHHHHHHHHHHHH
Q 025040          153 CNVSQYLCIGRFSATSFQVL-GHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYSWA  213 (259)
Q Consensus       153 ~~~~~~~~l~~~~~~~~si~-~~~~pv~~~~~s~~~~~e~~s~~~~~G~~lii~g~~~~~~~  213 (259)
                      ..+++..++++.++..+..+ ..+.|+++.++|+++|+|+++..+++|++++++|+++.+..
T Consensus        43 s~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~~~~Gi~LIi~GV~ll~~~  104 (137)
T 2i68_A           43 SFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLL  104 (137)
T ss_dssp             HHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence            34445668999999988787 89999999999999999999999999999999999998653

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=98.23  E-value=2.1e-06  Score=61.03  Aligned_cols=58  Identities=19%  Similarity=0.288  Sum_probs=51.0

Q ss_pred             HHHHHHhcccCceeeehh-hhhhhHHHHhhhhhhcCCcccccchhhHHHHHHHHHHHHH
Q 025040          155 VSQYLCIGRFSATSFQVL-GHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYSW  212 (259)
Q Consensus       155 ~~~~~~l~~~~~~~~si~-~~~~pv~~~~~s~~~~~e~~s~~~~~G~~lii~g~~~~~~  212 (259)
                      +....++++.+...+..+ ..+.|+.+.++++++|||++|..+++|.++++.|++..+.
T Consensus        45 ~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s~~~~~Gi~lIi~Gv~~l~~  103 (110)
T 3b5d_A           45 WLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINL  103 (110)
T ss_pred             HHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence            334457899888888666 8999999999999999999999999999999999998754

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=98.02  E-value=5.4e-07  Score=64.17  Aligned_cols=61  Identities=10%  Similarity=0.166  Sum_probs=54.9

Q ss_pred             eeeeeeeecccchhHHHHH-hhhhHHHHHHHHHHHhccccChhhhhhhhheeecceeeeecc
Q 025040            3 IAGMNFSLMLNSVGFYQIS-KLSMIPVVCVMEWILHNKHYSKEVKMAVVVVVIGVGVCTITD   63 (259)
Q Consensus         3 ~~~~n~al~~~~~~~~~~l-~~~~p~~~~l~~~l~~~~~~~~~~~~~~~l~~~Gv~l~~~~~   63 (259)
                      ..+.+.++++.|.+.+..+ ..+.|+++.+++++++||++++.+++++.+.++|+.++...+
T Consensus        44 ~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s~~~~~Gi~lIi~Gv~~l~~~~  105 (110)
T 3b5d_A           44 FWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (110)
T ss_pred             HHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            3456778999999999888 899999999999999999999999999999999999876543

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=97.94  E-value=4.9e-07  Score=66.74  Aligned_cols=60  Identities=12%  Similarity=0.185  Sum_probs=43.8

Q ss_pred             ceeeeeeeecccchhHHHHH-hhhhHHHHHHHHHHHhccccChhhhhhhhheeecceeeee
Q 025040            2 SIAGMNFSLMLNSVGFYQIS-KLSMIPVVCVMEWILHNKHYSKEVKMAVVVVVIGVGVCTI   61 (259)
Q Consensus         2 ~~~~~n~al~~~~~~~~~~l-~~~~p~~~~l~~~l~~~~~~~~~~~~~~~l~~~Gv~l~~~   61 (259)
                      ++.+.+.++++++++.+..+ .++.|++++++++++++|++++.+++|+++.++|++++..
T Consensus        43 s~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~~~~Gi~LIi~GV~ll~~  103 (137)
T 2i68_A           43 SFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINL  103 (137)
T ss_dssp             HHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence            34567889999999988888 8999999999999999999999999999999999998754

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00