Citrus Sinensis ID: 025120

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------
Protein Sequence
MAFTWGSALRITLLILLVAAVVTACFTLPVEKILKDFLTWVDQDLGPWGPLVLAVAYIPLTILAVPASVLTLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQFRSVALAIQRSGFKIVLLLRLVPLLPFNMLNYLLSVTPVPLLEYMLASWIGMMPITLALVYVGTTLKDLSDVTHGWNEFSKTRWAFLIFGLVVSALAENEDIDAILGSPELPIMAEQPVDLNQPLIIKIEGNDDSHEK
Secondary Structure (PSIPRED)
ccccHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHcccHHHHHHHHHHHcccHHHHHHHHHcccccHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHcccEEEEEEEEccccHHHHHHHHHcccccccHHEEHHHHHHHcHHHEEEEHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHcccccHHcccccccEEccccccccccEEEEEccccccccc
Coil and Loop (DISEMBL)
MAFTWGSALRITLLILLVAAVVTACFTLPVEKILKDFLTWVdqdlgpwgplVLAVAYIPLTILAVPASVltlgggylfglpvgfvadsigATIGAGAAFLLgrtigkpfvisklkdypqfrSVALAIQRSGFKIVLLLRlvpllpfnmLNYLLSVTPVPLLEYMLASWIGMMPITLALVYVGTTLKDLSDVTHGWNEFSKTRWAFLIFGLVVSalaenedidailgspelpimaeqpvdlnqpliikiegnddshek
Flexible Loop (DISEMBL)
MAFTWGSALRITLLILLVAAVVTACFTLPVEKILKDFLTWVDQDLGPWGPLVLAVAYIPLTILAVPASVLTLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQFRSVALAIQRSGFKIVLLLRLVPLLPFNMLNYLLSVTPVPLLEYMLASWIGMMPITLALVYVGTTLKDLSDVTHGWNEFSKTRWAFLIFGLVVSALAENEDIDAILGSPELPIMAeqpvdlnqpliikiegnddshek
Low Complexity Region (SEG)
MAFTWGSalritllillvaavvtaCFTLPVEKILKDFLTWVDQDLGPWGPLVLAVAYIPLTILAVPASVLTLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQFRSVALAIQRSGFKIvlllrlvpllpFNMLNYLLSVTPVPLLEYMLASWIGMMPITLALVYVGTTLKDLSDVTHGWNEFSKTRWAFLIFGLVVSALAENEDIDAILGSPELPIMAEQPVDLNQPLIIKIEGNDDSHEK
Disordered region (IsUnstruct)
**FTWGSALRITLLILLVAAVVTACFTLPVEKILKDFLTWVDQDLGPWGPLVLAVAYIPLTILAVPASVLTLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQFRSVALAIQRSGFKIVLLLRLVPLLPFNMLNYLLSVTPVPLLEYMLASWIGMMPITLALVYVGTTLKDLSDVTHGWNEFSKTRWAFLIFGLVVSALAENEDIDAILGSPELPIMAEQPVDLNQPLIIK**********
Disordered Region (DISOPRED)
******SALRITLLILLVAAVVTACFTLPVEKILKDFLTWVDQDLGPWGPLVLAVAYIPLTILAVPASVLTLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQFRSVALAIQRSGFKIVLLLRLVPLLPFNMLNYLLSVTPVPLLEYMLASWIGMMPITLALVYVGTTLKDLSDVTHGWNEFSKTRWAFLIFGLVVSALAENEDIDA**********************************
Disordered Region (DISEMBL)
MAFTWGSALRITLLILLVAAVVTACFTLPVEKILKDFLTWVDQDLGPWGPLVLAVAYIPLTILAVPASVLTLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQFRSVALAIQRSGFKIVLLLRLVPLLPFNMLNYLLSVTPVPLLEYMLASWIGMMPITLALVYVGTTLKDLSDVTHGWNEFSKTRWAFLIFGLVVSALAENEDIDAILGSPELPIMAEQPVDLNQPLIIKIEGNDDSHEK
Disordered Region (DISPRO)
*AFTWGSALRITLLILLVAAVVTACFTLPVEKILKDFLTWVDQDLGPWGPLVLAVAYIPLTILAVPASVLTLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQFRSVALAIQRSGFKIVLLLRLVPLLPFNMLNYLLSVTPVPLLEYMLASWIGMMPITLALVYVGTTLKDLSDVTHGWNEFSKTRWAFLIFGLVVSALAENEDIDAILGSPELPIMAEQPVDLNQPLIIKIEG*******
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
ooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHiiHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHiiHHHHHHHHHHHHHHHHHHHooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAFTWGSALRITLLILLVAAVVTACFTLPVEKILKDFLTWVDQDLGPWGPLVLAVAYIPLTILAVPASVLTLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQFRSVALAIQRSGFKIVLLLRLVPLLPFNMLNYLLSVTPVPLLEYMLASWIGMMPITLALVYVGTTLKDLSDVTHGWNEFSKTRWAFLIFGLVVSALAENEDIDAILGSPELPIMAEQPVDLNQPLIIKIEGNDDSHEK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	257	2.2.26 [Sep-21-2011]
Q55909	209	TVP38/TMEM64 family membr	N/A	no	0.692	0.851	0.370	6e-27
Q3U145	381	Transmembrane protein 64	yes	no	0.688	0.464	0.310	2e-14
Q6YI46	380	Transmembrane protein 64	yes	no	0.688	0.465	0.299	3e-13
P76219	236	TVP38/TMEM64 family membr	N/A	no	0.614	0.669	0.287	5e-12
P67118	252	TVP38/TMEM64 family membr	yes	no	0.536	0.547	0.307	2e-09
P67117	252	TVP38/TMEM64 family membr	yes	no	0.536	0.547	0.307	2e-09
Q8L586	287	Uncharacterized membrane	no	no	0.743	0.665	0.253	3e-09
O62126	246	Transmembrane protein 41	yes	no	0.552	0.577	0.277	5e-09
A1A5V7	282	Transmembrane protein 41B	no	no	0.544	0.496	0.284	2e-08
Q8MXN7	334	Transmembrane protein 41	no	no	0.618	0.476	0.291	2e-08

>sp|Q55909|Y305_SYNY3 TVP38/TMEM64 family membrane protein slr0305 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=slr0305 PE=3 SV=1

 Score =  121 bits (303), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 67/181 (37%), Positives = 110/181 (60%), Gaps = 3/181 (1%)

Query: 34  LKDFLTWVDQDLGPWGPLVLAVAYIPLTILAVPASVLTLGGGYLFGLPVGFVADSIGATI 93
           L + L W+D  LG W  +   + Y   T++ +P S+LTLG G +FG+ +G +   IGAT+
Sbjct: 5   LLNALQWID-GLGTWAAIAFMLLYTVATVVFLPGSILTLGAGVVFGVILGSIYVFIGATL 63

Query: 94  GAGAAFLLGRTIGKPFVISKLKDYPQFRSVALAIQRSGFKIVLLLRLVPLLPFNMLNYLL 153
           GA AAFL+GR + + +V  K+    +F+++  A+ + G KIV+L RL P+ PFN+LNY  
Sbjct: 64  GATAAFLVGRYLARGWVAKKIAGNQKFKAIDEAVGKEGLKIVILTRLSPVFPFNLLNYAY 123

Query: 154 SVTPVPLLEYMLASWIGMMPITLALVYVGTTLKDLSDVTHGWNEFSKT-RWAFLIFGLVV 212
            +T V L +Y++ S +GM+P T+  VY+G+    L+ +    N+ + T +W   I G + 
Sbjct: 124 GITNVSLKDYVIGS-LGMIPGTIMYVYIGSLAGSLATLGTATNQANPTLQWTIRIVGFIA 182

Query: 213 S 213
           +
Sbjct: 183 T 183

Synechocystis sp. (strain PCC 6803 / Kazusa) (taxid: 1111708)

>sp|Q3U145|TMM64_MOUSE Transmembrane protein 64 OS=Mus musculus GN=Tmem64 PE=2 SV=1

 Score = 79.7 bits (195), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 58/187 (31%), Positives = 101/187 (54%), Gaps = 10/187 (5%)

Query: 10  RITLLILLVAAVVTACFTLPVEKILKDFLTWVDQDLGPWGPLVLAVAYIPLTILAVPAS- 68
           R  +L+ ++AA+  A   L V + L+  L WV+      G L+  V +I   +++ P   
Sbjct: 122 RSLVLVCVLAALCFASLAL-VRRYLQHLLLWVESLDSLLGVLLFVVGFI---VVSFPCGW 177

Query: 69  ---VLTLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQFRSVAL 125
              VL +  GYL+G  +G     +G  IG   A ++ + +   +V +++++  +  +V  
Sbjct: 178 GYIVLNVAAGYLYGFVLGMGLMVVGVLIGTFIAHVVCKRLLTAWVAARIQNSDKLSAVIR 237

Query: 126 AIQR-SGFKIVLLLRLVPLLPFNMLNYLLSVTPVPLLEYMLASWIGMMPITLALVYVGTT 184
            ++  SG K+V L RL P+ PF + N + S+T VPL  Y++AS  G++P  L   Y+GTT
Sbjct: 238 VVEGGSGLKVVALARLTPI-PFGLQNAVFSITDVPLPSYLMASSAGLLPTQLLNSYLGTT 296

Query: 185 LKDLSDV 191
           L+ + DV
Sbjct: 297 LRTMEDV 303

Mus musculus (taxid: 10090)

>sp|Q6YI46|TMM64_HUMAN Transmembrane protein 64 OS=Homo sapiens GN=TMEM64 PE=1 SV=2

 Score = 75.9 bits (185), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 56/187 (29%), Positives = 99/187 (52%), Gaps = 10/187 (5%)

Query: 10  RITLLILLVAAVVTACFTLPVEKILKDFLTWVDQDLGPWGPLVLAVAYIPLTILAVPAS- 68
           R  +L+ ++AA+  A   L V + L   L WV+      G L+  V +I   +++ P   
Sbjct: 121 RSLVLVCVLAALCFASLAL-VRRYLHHLLLWVESLDSLLGVLLFVVGFI---VVSFPCGW 176

Query: 69  ---VLTLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQFRSVAL 125
              VL +  GYL+G  +G     +G  IG   A ++ + +   +V ++++   +  +V  
Sbjct: 177 GYIVLNVAAGYLYGFVLGMGLMMVGVLIGTFIAHVVCKRLLTAWVAARIQSSEKLSAVIR 236

Query: 126 AIQR-SGFKIVLLLRLVPLLPFNMLNYLLSVTPVPLLEYMLASWIGMMPITLALVYVGTT 184
            ++  SG K+V L RL P+ PF + N + S+T + L  Y++AS +G++P  L   Y+GTT
Sbjct: 237 VVEGGSGLKVVALARLTPI-PFGLQNAVFSITDLSLPNYLMASSVGLLPTQLLNSYLGTT 295

Query: 185 LKDLSDV 191
           L+ + DV
Sbjct: 296 LRTMEDV 302

Homo sapiens (taxid: 9606)

>sp|P76219|YDJX_ECOLI TVP38/TMEM64 family membrane protein YdjX OS=Escherichia coli (strain K12) GN=ydjX PE=3 SV=2

 Score = 71.6 bits (174), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 46/160 (28%), Positives = 84/160 (52%), Gaps = 2/160 (1%)

Query: 16  LLVAAVVTACFTLPVEKILKDF--LTWVDQDLGPWGPLVLAVAYIPLTILAVPASVLTLG 73
           L+ A V+ A     +  +L D   L  + +  G +G  +  + +I  T+L +P S+L + 
Sbjct: 12  LIFALVIYAIHAFGLFDLLTDLPHLQTLIRQSGFFGYSLYILLFIIATLLLLPGSILVIA 71

Query: 74  GGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQFRSVALAIQRSGFK 133
           GG +FG  +G +   I AT+ +  +FLL R +G+  ++  +     F+++   I R+G  
Sbjct: 72  GGIVFGPLLGTLLSLIAATLASSCSFLLARWLGRDLLLKYVGHSNTFQAIEKGIARNGID 131

Query: 134 IVLLLRLVPLLPFNMLNYLLSVTPVPLLEYMLASWIGMMP 173
            ++L RL+PL P+N+ NY   +T +    Y L S +  +P
Sbjct: 132 FLILTRLIPLFPYNIQNYAYGLTTIAFWPYTLISALTTLP 171

Escherichia coli (strain K12) (taxid: 83333)

>sp|P67118|Y1528_MYCBO TVP38/TMEM64 family membrane protein Mb1528c OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) GN=Mb1528c PE=3 SV=1

 Score = 62.8 bits (151), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 43/140 (30%), Positives = 71/140 (50%), Gaps = 2/140 (1%)

Query: 43  QDLGPWGPLVLAVAYIPLTILAVPASVLTLGGGYLFGLPVGFVADSIGATIGAGAAFLLG 102
           + LG W PL   + +  +T+   P +  TL  G LFG  VG     +G+T  A  A LL 
Sbjct: 62  KSLGAWFPLAFLLVHTVVTVPPFPRTAFTLAAGLLFGSVVGVFIAVVGSTASAVIAMLLV 121

Query: 103 RTIGKPFVISKLKDYPQFRSVALAIQRSGFKIVLLLRLVPLLPFNMLNYLLSVTPVPLLE 162
           R  G  + ++ L        +   ++  G+  +L LRL+P++PF  +NY    + V +L 
Sbjct: 122 RATG--WQLNSLVRRRAINRLDERLRERGWLAILSLRLIPVVPFAAINYAAGASGVRILS 179

Query: 163 YMLASWIGMMPITLALVYVG 182
           +  A+  G++P T A+V +G
Sbjct: 180 FAWATLAGLLPGTAAVVILG 199

Mycobacterium bovis (taxid: 1765)

>sp|P67117|Y1491_MYCTU TVP38/TMEM64 family membrane protein Rv1491c/MT1538 OS=Mycobacterium tuberculosis GN=Rv1491c PE=3 SV=1

 Score = 62.8 bits (151), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 43/140 (30%), Positives = 71/140 (50%), Gaps = 2/140 (1%)

Query: 43  QDLGPWGPLVLAVAYIPLTILAVPASVLTLGGGYLFGLPVGFVADSIGATIGAGAAFLLG 102
           + LG W PL   + +  +T+   P +  TL  G LFG  VG     +G+T  A  A LL 
Sbjct: 62  KSLGAWFPLAFLLVHTVVTVPPFPRTAFTLAAGLLFGSVVGVFIAVVGSTASAVIAMLLV 121

Query: 103 RTIGKPFVISKLKDYPQFRSVALAIQRSGFKIVLLLRLVPLLPFNMLNYLLSVTPVPLLE 162
           R  G  + ++ L        +   ++  G+  +L LRL+P++PF  +NY    + V +L 
Sbjct: 122 RATG--WQLNSLVRRRAINRLDERLRERGWLAILSLRLIPVVPFAAINYAAGASGVRILS 179

Query: 163 YMLASWIGMMPITLALVYVG 182
           +  A+  G++P T A+V +G
Sbjct: 180 FAWATLAGLLPGTAAVVILG 199

Mycobacterium tuberculosis (taxid: 1773)

>sp|Q8L586|Y4958_ARATH Uncharacterized membrane protein At4g09580 OS=Arabidopsis thaliana GN=At4g09580 PE=1 SV=1

 Score = 62.4 bits (150), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 53/209 (25%), Positives = 93/209 (44%), Gaps = 18/209 (8%)

Query: 5   WGSALRITLLILLVAAVVTACFTLP--------VEKILKDFLTWVDQDLGPWGP------ 50
           W  A+  T+ ++    +     T+P        V + + D L  + ++LG +        
Sbjct: 53  WEFAVFFTVFLVFTTGLFCIYLTMPAAEYGKLKVPRTISD-LRLLKENLGSYASEYQARF 111

Query: 51  -LVLAVAYIPLTILAVPASV-LTLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKP 108
            L     YI +    +P ++ ++L  G LFG+  GFV   + AT GA + F L + +G+P
Sbjct: 112 ILGYCSTYIFMQTFMIPGTIFMSLLAGALFGVVRGFVLVVLNATAGACSCFFLSKLVGRP 171

Query: 109 FVISKLKDYPQFRSVALAIQRSGF-KIVLLLRLVPLLPFNMLNYLLSVTPVPLLEYMLAS 167
            V     +  +F    +A +R      +L LR+ P LP   +N    +  +P   + LA+
Sbjct: 172 LVNWLWPEKLRFFQAEIAKRRDRLLNYMLFLRITPTLPNLFINLSSPIVDIPFHVFFLAT 231

Query: 168 WIGMMPITLALVYVGTTLKDLSDVTHGWN 196
            +G+MP +   V  G  L DL  V   ++
Sbjct: 232 LVGLMPASYITVRAGLALGDLRSVKDLYD 260

Arabidopsis thaliana (taxid: 3702)

>sp|O62126|TM41_CAEEL Transmembrane protein 41 homolog OS=Caenorhabditis elegans GN=tag-175 PE=3 SV=1

 Score = 61.6 bits (148), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 40/144 (27%), Positives = 70/144 (48%), Gaps = 2/144 (1%)

Query: 55  VAYIPLTILAVPASV-LTLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISK 113
           V Y+ L   A+P S+ LT+  GYLF   V  V     +  GA   + + +  G+ FV+ K
Sbjct: 76  VVYVFLQSFAIPGSIFLTILSGYLFPFYVAIVLVCSCSATGAAICYTISKLFGRSFVLQK 135

Query: 114 LKDYPQFRSVALAIQRSGF-KIVLLLRLVPLLPFNMLNYLLSVTPVPLLEYMLASWIGMM 172
             +        L+  R  F   ++ LR+ P++P  ++N    V  VPL  +   +++G+ 
Sbjct: 136 FPERIAKWQDDLSKHRDDFLNYMIFLRVTPIVPNWLINIASPVLDVPLAPFFWGTFLGVA 195

Query: 173 PITLALVYVGTTLKDLSDVTHGWN 196
           P +   +  G+TL+ LS  +  W+
Sbjct: 196 PPSFLYIQAGSTLEQLSHTSVAWS 219

Caenorhabditis elegans (taxid: 6239)

>sp|A1A5V7|TM41B_DANRE Transmembrane protein 41B OS=Danio rerio GN=tmem41b PE=2 SV=1

 Score = 59.7 bits (143), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 41/144 (28%), Positives = 68/144 (47%), Gaps = 4/144 (2%)

Query: 57  YIPLTILAVPASV-LTLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLK 115
           YI L   A+P S+ L++  GYL+  P+      + + +GA   ++L   +G+P V   L 
Sbjct: 112 YIFLQTFAIPGSIFLSILSGYLYPFPLALFLVCLCSGLGASFCYMLSYLVGRPMVYKYLT 171

Query: 116 DYPQFRSVALAIQRSGF-KIVLLLRLVPLLPFNMLNYLLSVTPVPLLEYMLASWIGMMPI 174
           +  Q  S  +   R      ++ LR+ P LP   +N    V  VPL  + L +++G+ P 
Sbjct: 172 ERAQKWSQQVDKHREHLINYIIFLRITPFLPNWFINITSPVINVPLGVFFLGTFLGVAPP 231

Query: 175 TLALVYVGTTLKDLSDVTHG--WN 196
           +   +  GTTL  L+       WN
Sbjct: 232 SFVAINAGTTLYKLTTAGEAVSWN 255

Danio rerio (taxid: 7955)

>sp|Q8MXN7|TM41_DICDI Transmembrane protein 41 homolog OS=Dictyostelium discoideum GN=DDB_G0275543 PE=3 SV=2

 Score = 59.7 bits (143), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 47/161 (29%), Positives = 77/161 (47%), Gaps = 2/161 (1%)

Query: 32  KILKDFLTWVDQDLGPWGPLVLAVAYIPLTILAVPASV-LTLGGGYLFGLPVGFVADSIG 90
           K+L D L+    D          V Y  L   ++P SV L+   G LFGL VGF      
Sbjct: 141 KLLSDILSQYTDDNYFIVITTFGVIYTFLQAFSIPGSVFLSFLSGGLFGLKVGFPLVCFV 200

Query: 91  ATIGAGAAFLLGRTIGKPFVISKLKDYPQFRSVALAIQRSGF-KIVLLLRLVPLLPFNML 149
           AT+GA  ++L+   IG+  V     D  +  S +L+ +R      ++ LR+ P LP   +
Sbjct: 201 ATLGATFSYLISYYIGRNLVRKLFPDKLKLFSDSLSQKRDNLLNYIVFLRITPFLPNWFI 260

Query: 150 NYLLSVTPVPLLEYMLASWIGMMPITLALVYVGTTLKDLSD 190
           N    +  VP+  + + ++IG+MP T   V  G  ++++ +
Sbjct: 261 NLASPLLDVPIHTFAIGTFIGIMPATFLAVKAGIQIQNIQN 301

Dictyostelium discoideum (taxid: 44689)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	257
388517845	274	unknown [Medicago truncatula]	1.0	0.937	0.788	1e-111
255552219	302	conserved hypothetical protein [Ricinus	0.996	0.847	0.798	1e-111
224107213	275	predicted protein [Populus trichocarpa]	0.996	0.930	0.776	1e-108
224100323	275	predicted protein [Populus trichocarpa]	0.996	0.930	0.758	1e-104
225432530	274	PREDICTED: TVP38/TMEM64 family membrane	1.0	0.937	0.740	1e-104
356555618	274	PREDICTED: TVP38/TMEM64 family membrane	1.0	0.937	0.777	1e-103
358249295	274	uncharacterized protein LOC100810779 [Gl	1.0	0.937	0.777	1e-102
449466368	275	PREDICTED: TVP38/TMEM64 family membrane	1.0	0.934	0.749	3e-99
388490712	274	unknown [Medicago truncatula]	0.996	0.934	0.705	5e-99
356564532	276	PREDICTED: TVP38/TMEM64 family membrane	0.988	0.920	0.690	7e-95

>gi|388517845|gb|AFK46984.1| unknown [Medicago truncatula]

 Score =  406 bits (1044), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 216/274 (78%), Positives = 242/274 (88%), Gaps = 17/274 (6%)

Query: 1   MAFTWGSALRITLLILLVAAVVTACFTLPVEKILKDFLTWVDQDLGPWGPLVLAVAYIPL 60
           MAF+W SA RITLL+LL+ AV+ ACFTLP+EKI+KDFL WVD+DLG WGPLVLAVAYIPL
Sbjct: 1   MAFSWASAFRITLLLLLLLAVIVACFTLPIEKIMKDFLLWVDRDLGAWGPLVLAVAYIPL 60

Query: 61  TILAVPASVLTLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQF 120
           T+LAVPASVLTLGGGYLFGLPVGFVADSIGAT+GAGAAFLLGRTIG+PFV+S+LKDYP+F
Sbjct: 61  TVLAVPASVLTLGGGYLFGLPVGFVADSIGATVGAGAAFLLGRTIGRPFVVSRLKDYPKF 120

Query: 121 RSVALAIQRSGFKIVLLLRLVPLLPFNMLNYLLSVTPVPLLEYMLASWIGMMPITLALVY 180
           +SVA+AI+RSGFKIVLLLRLVPLLPFNMLNYLLSVTPV L+EYMLASW+GMMPITLALVY
Sbjct: 121 KSVAIAIRRSGFKIVLLLRLVPLLPFNMLNYLLSVTPVSLVEYMLASWLGMMPITLALVY 180

Query: 181 VGTTLKDLSDVTHGWNEFSKTRWAFLIFGLVVS-----------------ALAENEDIDA 223
           VGTTLKDLSDVTHGWNEFSK+RWAF+I GL+VS                 ALAENEDID 
Sbjct: 181 VGTTLKDLSDVTHGWNEFSKSRWAFIIIGLIVSVVLMICVTKVAKFALDKALAENEDIDG 240

Query: 224 ILGSPELPIMAEQPVDLNQPLIIKIEGNDDSHEK 257
           +  SPELPI+AE P DLNQPLIIKI+  +D+HEK
Sbjct: 241 VTSSPELPIVAEPPSDLNQPLIIKIDFTEDNHEK 274

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255552219|ref|XP_002517154.1| conserved hypothetical protein [Ricinus communis] gi|223543789|gb|EEF45317.1| conserved hypothetical protein [Ricinus communis]

 Score =  405 bits (1041), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 218/273 (79%), Positives = 236/273 (86%), Gaps = 17/273 (6%)

Query: 2   AFTWGSALRITLLILLVAAVVTACFTLPVEKILKDFLTWVDQDLGPWGPLVLAVAYIPLT 61
           + TWGSALRITLL LL+AAVV ACFTLPVEKILKDFL WV+QDLGPWGPLVLAVAYIPLT
Sbjct: 30  SMTWGSALRITLLFLLIAAVVVACFTLPVEKILKDFLLWVEQDLGPWGPLVLAVAYIPLT 89

Query: 62  ILAVPASVLTLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQFR 121
           +LAVPASVLTLGGGYLFGLPVGFVADSIGAT+GAGAAFLLGRTIG+ FVISKLKDYPQFR
Sbjct: 90  VLAVPASVLTLGGGYLFGLPVGFVADSIGATVGAGAAFLLGRTIGRSFVISKLKDYPQFR 149

Query: 122 SVALAIQRSGFKIVLLLRLVPLLPFNMLNYLLSVTPVPLLEYMLASWIGMMPITLALVYV 181
           SVA+AIQRSGFKIVLLLRLVPLLPFNMLNYLLSVTPVPL EYMLASWIGMMPITLALVYV
Sbjct: 150 SVAIAIQRSGFKIVLLLRLVPLLPFNMLNYLLSVTPVPLGEYMLASWIGMMPITLALVYV 209

Query: 182 GTTLKDLSDVTHGWNEFSKTRWAFLIFGLVVSAL-----------------AENEDIDAI 224
           GTTLKDLSDVTHGW++FS TRW  ++ G VVS +                 AENEDID I
Sbjct: 210 GTTLKDLSDVTHGWSKFSTTRWVCIVLGFVVSVVLMFCVTRVAKSALAKALAENEDIDTI 269

Query: 225 LGSPELPIMAEQPVDLNQPLIIKIEGNDDSHEK 257
           L +P+LPI+ +  VDLNQPLIIKI+  +D HEK
Sbjct: 270 LSTPQLPIVGDPSVDLNQPLIIKIDAPEDDHEK 302

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224107213|ref|XP_002314410.1| predicted protein [Populus trichocarpa] gi|222863450|gb|EEF00581.1| predicted protein [Populus trichocarpa]

 Score =  395 bits (1015), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 212/273 (77%), Positives = 236/273 (86%), Gaps = 17/273 (6%)

Query: 2   AFTWGSALRITLLILLVAAVVTACFTLPVEKILKDFLTWVDQDLGPWGPLVLAVAYIPLT 61
           AFTWGS LRIT  +LL+AAVV   FTLPVEKILKDFL WV+QDLGPWGPLVLAVAYIPLT
Sbjct: 3   AFTWGSLLRITFFLLLIAAVVFGFFTLPVEKILKDFLLWVEQDLGPWGPLVLAVAYIPLT 62

Query: 62  ILAVPASVLTLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQFR 121
           +LAVPA+VLTLGGGYLFGLP+GFVADSIGATIGAGAAFLLGRTIG+ FV+SKLKDYP+FR
Sbjct: 63  VLAVPAAVLTLGGGYLFGLPLGFVADSIGATIGAGAAFLLGRTIGRSFVVSKLKDYPKFR 122

Query: 122 SVALAIQRSGFKIVLLLRLVPLLPFNMLNYLLSVTPVPLLEYMLASWIGMMPITLALVYV 181
           SVA+AIQ+SGFKIVLLLRLVPLLPFNMLNYLLSVTPVP+ EYMLASWIGMMPITLA VY+
Sbjct: 123 SVAIAIQKSGFKIVLLLRLVPLLPFNMLNYLLSVTPVPIGEYMLASWIGMMPITLAFVYI 182

Query: 182 GTTLKDLSDVTHGWNEFSKTRWAFLIFGLVVS-----------------ALAENEDIDAI 224
           GTTLKDLSDVTHGW+EFS TRW F+I GL+VS                 ALAENED+D I
Sbjct: 183 GTTLKDLSDVTHGWSEFSTTRWVFIILGLLVSVVLIFCVTKVAKSALDKALAENEDLDFI 242

Query: 225 LGSPELPIMAEQPVDLNQPLIIKIEGNDDSHEK 257
           L S +L I+A+ PV+LNQPLIIKI+ ++D HEK
Sbjct: 243 LASSQLTIVADIPVNLNQPLIIKIDPSEDKHEK 275

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224100323|ref|XP_002311831.1| predicted protein [Populus trichocarpa] gi|222851651|gb|EEE89198.1| predicted protein [Populus trichocarpa]

 Score =  383 bits (983), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 207/273 (75%), Positives = 234/273 (85%), Gaps = 17/273 (6%)

Query: 2   AFTWGSALRITLLILLVAAVVTACFTLPVEKILKDFLTWVDQDLGPWGPLVLAVAYIPLT 61
           +F+W S LRIT+ +LLVAA V A FTLPVEKILKDFL WV+QDLGPWGPLVLA+AYIPLT
Sbjct: 3   SFSWASLLRITIFLLLVAAAVFAFFTLPVEKILKDFLLWVEQDLGPWGPLVLAIAYIPLT 62

Query: 62  ILAVPASVLTLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQFR 121
           ILAVPASVLTLGGGYLFGLPVGFVADSIGAT+GAGAAFLLGRTIG+ FV+SKLKDYP+F 
Sbjct: 63  ILAVPASVLTLGGGYLFGLPVGFVADSIGATVGAGAAFLLGRTIGRSFVVSKLKDYPKFS 122

Query: 122 SVALAIQRSGFKIVLLLRLVPLLPFNMLNYLLSVTPVPLLEYMLASWIGMMPITLALVYV 181
           SVA+AIQ+SGFKIVLLLRLVPLLPFNMLNYLLSVTPVP+ EYMLASWIGMMPITLALVY+
Sbjct: 123 SVAIAIQKSGFKIVLLLRLVPLLPFNMLNYLLSVTPVPIGEYMLASWIGMMPITLALVYI 182

Query: 182 GTTLKDLSDVTHGWNEFSKTRWA-------------FLIFGLVVS----ALAENEDIDAI 224
           GTTLKDLSDVTHGW+EFS TRW              F +  +  S    ALAENED+D I
Sbjct: 183 GTTLKDLSDVTHGWSEFSTTRWVLIVLGLVVSVVLMFCVTKVAKSALDKALAENEDLDVI 242

Query: 225 LGSPELPIMAEQPVDLNQPLIIKIEGNDDSHEK 257
           L SP+LPI+A+  V+LNQPLIIKI+ ++D+HE+
Sbjct: 243 LASPQLPIVADTSVNLNQPLIIKIDPSEDNHEQ 275

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225432530|ref|XP_002280327.1| PREDICTED: TVP38/TMEM64 family membrane protein slr0305 [Vitis vinifera] gi|297736982|emb|CBI26183.3| unnamed protein product [Vitis vinifera]

 Score =  383 bits (983), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 203/274 (74%), Positives = 233/274 (85%), Gaps = 17/274 (6%)

Query: 1   MAFTWGSALRITLLILLVAAVVTACFTLPVEKILKDFLTWVDQDLGPWGPLVLAVAYIPL 60
           MAF+W S LRIT L+LL+AA+  ACFTLPVEKILKDFL W++QDLGPWGPL LAVAYIPL
Sbjct: 1   MAFSWLSFLRITFLLLLIAAIAVACFTLPVEKILKDFLLWIEQDLGPWGPLALAVAYIPL 60

Query: 61  TILAVPASVLTLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQF 120
           T+LAVPASVLTLGGGYLFGLPVGFVADSIGAT+GAGAAFLLGRTIG+ +VISKLKDYPQF
Sbjct: 61  TVLAVPASVLTLGGGYLFGLPVGFVADSIGATVGAGAAFLLGRTIGRSYVISKLKDYPQF 120

Query: 121 RSVALAIQRSGFKIVLLLRLVPLLPFNMLNYLLSVTPVPLLEYMLASWIGMMPITLALVY 180
           R+VA+AIQRSGFKIVLLLRLVPLLPFNMLNYLLSVTPVP+ EYMLASW+GMMPITLALVY
Sbjct: 121 RAVAIAIQRSGFKIVLLLRLVPLLPFNMLNYLLSVTPVPVWEYMLASWLGMMPITLALVY 180

Query: 181 VGTTLKDLSDVTHGWNEFSKTRWAFLIFGLVVSAL-----------------AENEDIDA 223
           +GTTLKDLSDVTHGW+EFS +RW F+  GLV+S +                 AENEDID 
Sbjct: 181 IGTTLKDLSDVTHGWHEFSTSRWIFIGLGLVISVILMVCVTKVAKAALEKALAENEDIDG 240

Query: 224 ILGSPELPIMAEQPVDLNQPLIIKIEGNDDSHEK 257
           I+ +P+LPI++   +DL QPL++KI+   D+ EK
Sbjct: 241 IVAAPQLPIVSNPSLDLQQPLVVKIDPTQDNQEK 274

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356555618|ref|XP_003546127.1| PREDICTED: TVP38/TMEM64 family membrane protein slr0305-like [Glycine max]

 Score =  380 bits (977), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 213/274 (77%), Positives = 239/274 (87%), Gaps = 17/274 (6%)

Query: 1   MAFTWGSALRITLLILLVAAVVTACFTLPVEKILKDFLTWVDQDLGPWGPLVLAVAYIPL 60
           M+F+W S LRIT+L+LL+AAV+ ACFTLP+EK++KDFL WVD DLGPWGPLVLAVAYIPL
Sbjct: 1   MSFSWSSTLRITILLLLLAAVIVACFTLPIEKMMKDFLLWVDHDLGPWGPLVLAVAYIPL 60

Query: 61  TILAVPASVLTLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQF 120
           T+LAVPASVLTLGGGYLFGLPVGFVADSIGAT+GAGAAFLLGRTIG+ FV+S+LKDYPQF
Sbjct: 61  TVLAVPASVLTLGGGYLFGLPVGFVADSIGATVGAGAAFLLGRTIGRSFVVSRLKDYPQF 120

Query: 121 RSVALAIQRSGFKIVLLLRLVPLLPFNMLNYLLSVTPVPLLEYMLASWIGMMPITLALVY 180
           RSVA+AI+RSGFKIVLLLRLVPLLPFNMLNYLLSVTPV + EYMLASW+GMMPITLALVY
Sbjct: 121 RSVAIAIRRSGFKIVLLLRLVPLLPFNMLNYLLSVTPVSIGEYMLASWLGMMPITLALVY 180

Query: 181 VGTTLKDLSDVTHGWNEFSKTRWAFLIFGLVVSAL-----------------AENEDIDA 223
           VGTTLKDLSDVTHGW EFSKTRWAF+I GLV+S +                 AENEDID 
Sbjct: 181 VGTTLKDLSDVTHGWGEFSKTRWAFIILGLVISVVLMICVTRVAKAALDKALAENEDIDG 240

Query: 224 ILGSPELPIMAEQPVDLNQPLIIKIEGNDDSHEK 257
           I  SP+LPI+AE   DLNQPLIIKI+ ++DSHEK
Sbjct: 241 ITSSPDLPIVAEPSADLNQPLIIKIDSSEDSHEK 274

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|358249295|ref|NP_001239770.1| uncharacterized protein LOC100810779 [Glycine max] gi|255646580|gb|ACU23764.1| unknown [Glycine max]

 Score =  378 bits (971), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 213/274 (77%), Positives = 239/274 (87%), Gaps = 17/274 (6%)

Query: 1   MAFTWGSALRITLLILLVAAVVTACFTLPVEKILKDFLTWVDQDLGPWGPLVLAVAYIPL 60
           M+ +W SALRIT+L+LL+AAV+ ACFTLP+EK++KDFL WVD DLGPWGPLVLAVAYIPL
Sbjct: 1   MSLSWASALRITILLLLLAAVIVACFTLPIEKMMKDFLLWVDHDLGPWGPLVLAVAYIPL 60

Query: 61  TILAVPASVLTLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQF 120
           T+LAVPASVLTLGGGYLFGLPVGFVADSIGAT+GAGAAFLLGRTIG+ FV+S+LKDYPQF
Sbjct: 61  TVLAVPASVLTLGGGYLFGLPVGFVADSIGATVGAGAAFLLGRTIGRSFVVSRLKDYPQF 120

Query: 121 RSVALAIQRSGFKIVLLLRLVPLLPFNMLNYLLSVTPVPLLEYMLASWIGMMPITLALVY 180
           RSVA+AI+RSGFKIVLLLRLVPLLPFNMLNYLLSVTPV + EYMLASW+GMMPITLALVY
Sbjct: 121 RSVAIAIRRSGFKIVLLLRLVPLLPFNMLNYLLSVTPVSIGEYMLASWLGMMPITLALVY 180

Query: 181 VGTTLKDLSDVTHGWNEFSKTRWAFLIFGLVVSAL-----------------AENEDIDA 223
           VGTTLKDLSDVTHGW EFSKTRWAF+I GLV+S +                 AENEDID 
Sbjct: 181 VGTTLKDLSDVTHGWGEFSKTRWAFIILGLVISVVLMICVTKVAKAALDKALAENEDIDG 240

Query: 224 ILGSPELPIMAEQPVDLNQPLIIKIEGNDDSHEK 257
           I  SP+LPI+AE   DLNQPLIIKI+ ++DSHEK
Sbjct: 241 ITSSPDLPIVAEPSADLNQPLIIKIDSSEDSHEK 274

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449466368|ref|XP_004150898.1| PREDICTED: TVP38/TMEM64 family membrane protein slr0305-like [Cucumis sativus] gi|449524669|ref|XP_004169344.1| PREDICTED: TVP38/TMEM64 family membrane protein slr0305-like [Cucumis sativus]

 Score =  367 bits (941), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 206/275 (74%), Positives = 227/275 (82%), Gaps = 18/275 (6%)

Query: 1   MAFTWGSALRITLLILLVAAVVTACFTLPVEKILKDFLTWVDQDLGPWGPLVLAVAYIPL 60
           MAFTW SAL+ITLL+LL+AA VTACFTLP+EKILKDFL WV +DLG WGPLVL++AYIPL
Sbjct: 1   MAFTWRSALKITLLLLLLAAAVTACFTLPIEKILKDFLLWVHEDLGAWGPLVLSIAYIPL 60

Query: 61  TILAVPASVLTLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQF 120
           T+LAVPAS+LTLGGGYLFGLPVGFVADSIGAT+GAGAAFLLGRTIGK FV+SKLKDYPQF
Sbjct: 61  TVLAVPASILTLGGGYLFGLPVGFVADSIGATVGAGAAFLLGRTIGKSFVVSKLKDYPQF 120

Query: 121 RSVALAIQRSGFKIVLLLRLVPLLPFNMLNYLLSVTPVPLLEYMLASWIGMMPITLALVY 180
            SVA+AI RSGFKIVLLLRLVPLLPFNMLNYLLSVTPV L EYMLASW+GMMPITL LVY
Sbjct: 121 HSVAIAINRSGFKIVLLLRLVPLLPFNMLNYLLSVTPVSLGEYMLASWLGMMPITLTLVY 180

Query: 181 VGTTLKDLSDVTHGWNEFSKTRWAFLIFGLVVSAL------------------AENEDID 222
           VGTTLKDLSDVTHGW EFSKTRWAF+I GLVVS +                     + +D
Sbjct: 181 VGTTLKDLSDVTHGWGEFSKTRWAFIILGLVVSVVLAYCVTRVAKAALEKALAENGDGVD 240

Query: 223 AILGSPELPIMAEQPVDLNQPLIIKIEGNDDSHEK 257
            +  S +LPI+ E PVDLNQPLIIKI+   D   K
Sbjct: 241 YLGLSSQLPIVDESPVDLNQPLIIKIDSPQDDDRK 275

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388490712|gb|AFK33422.1| unknown [Medicago truncatula]

 Score =  366 bits (940), Expect = 5e-99,   Method: Compositional matrix adjust.
 Identities = 194/275 (70%), Positives = 221/275 (80%), Gaps = 19/275 (6%)

Query: 1   MAFTWGSALRITLLILLVAAVVTACFTLPVEKILKDFLTWVDQDLGPWGPLVLAVAYIPL 60
           M   W +AL+ITLL+LLV+A+V ACFTLP+EKILKDFL WVDQDLGPWGPL LAVAYIPL
Sbjct: 1   MFLAWPNALKITLLLLLVSAIVVACFTLPIEKILKDFLIWVDQDLGPWGPLALAVAYIPL 60

Query: 61  TILAVPASVLTLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQF 120
           TILAVPASVLTLGGGYLFGLPVG VADS+GATIGA AAFLLG TIGK FV SKLKDYPQF
Sbjct: 61  TILAVPASVLTLGGGYLFGLPVGIVADSVGATIGAVAAFLLGGTIGKSFVASKLKDYPQF 120

Query: 121 RSVALAIQRSGFKIVLLLRLVPLLPFNMLNYLLSVTPVPLLEYMLASWIGMMPITLALVY 180
           +SV++A QRSGFKIV LLRLVPLLP+N+LNYLLSVTPVPL EY LASW+GMMP+T+ALVY
Sbjct: 121 KSVSIATQRSGFKIVFLLRLVPLLPYNILNYLLSVTPVPLWEYTLASWLGMMPLTVALVY 180

Query: 181 VGTTLKDLSDVTHGWNEFSKTRWAFLIFGLVVS-----------------ALAENE-DID 222
            GTTLKD+SDVTHGW EFSKTRWA +IF LV+S                 ALAE E D+D
Sbjct: 181 AGTTLKDISDVTHGWGEFSKTRWAMIIFSLVISVVMMICVTKVAKSALDKALAECEKDMD 240

Query: 223 AILGSPELPIMAEQPVDLNQPLIIKIEGNDDSHEK 257
               S +L I+ E  V LNQPL+ +I+ +  + +K
Sbjct: 241 DTTSSEQL-IVTETSVGLNQPLVNEIDQDQANQQK 274

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356564532|ref|XP_003550507.1| PREDICTED: TVP38/TMEM64 family membrane protein slr0305-like [Glycine max]

 Score =  352 bits (904), Expect = 7e-95,   Method: Compositional matrix adjust.
 Identities = 187/271 (69%), Positives = 215/271 (79%), Gaps = 17/271 (6%)

Query: 1   MAFTWGSALRITLLILLVAAVVTACFTLPVEKILKDFLTWVDQDLGPWGPLVLAVAYIPL 60
           M+F+W SAL IT L+LLVAA V AC TLPV+KILKD L W+D++LGPWGPL L  AYIPL
Sbjct: 1   MSFSWTSALNITFLLLLVAAAVVACLTLPVDKILKDLLEWIDRNLGPWGPLALIAAYIPL 60

Query: 61  TILAVPASVLTLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQF 120
           T+L+VPASVLTLGGGYLFGLP+GF+ADSIGAT+GA AAFLLGRTIGK  V+S+LKDYPQF
Sbjct: 61  TVLSVPASVLTLGGGYLFGLPIGFIADSIGATVGAVAAFLLGRTIGKSLVVSRLKDYPQF 120

Query: 121 RSVALAIQRSGFKIVLLLRLVPLLPFNMLNYLLSVTPVPLLEYMLASWIGMMPITLALVY 180
           R V +AIQRSGFKI +LLRL P +PFNMLNYLLSVTPVPL EY LASW+GMMPITLALVY
Sbjct: 121 RLVTIAIQRSGFKISILLRLAPFVPFNMLNYLLSVTPVPLGEYTLASWLGMMPITLALVY 180

Query: 181 VGTTLKDLSDVTHGWNEFSKTRWAFLIFGLVVS-----------------ALAENEDIDA 223
           VGTT KDLSDVT GW+EFSKT   ++I GLV+S                 ALAE ED++ 
Sbjct: 181 VGTTFKDLSDVTRGWSEFSKTHLPWIISGLVISVVLMIWVTKVAKSALDEALAECEDMND 240

Query: 224 ILGSPELPIMAEQPVDLNQPLIIKIEGNDDS 254
              SPELPI+ E  VDLNQPLI K   ++D+
Sbjct: 241 TASSPELPIVTETLVDLNQPLINKTNQDEDN 271

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	257
TAIR|locus:2179654	280	AT5G19070 [Arabidopsis thalian	0.836	0.767	0.711	5.7e-86
TAIR|locus:2014530	274	AT1G03260 [Arabidopsis thalian	0.731	0.686	0.702	4.1e-73
TAIR|locus:2017769	344	AT1G22850 "AT1G22850" [Arabido	0.708	0.529	0.317	3.7e-18
UNIPROTKB|Q9KRB9	229	VC_1723 "Putative uncharacteri	0.630	0.707	0.293	4.4e-13
TIGR_CMR|VC_1723	229	VC_1723 "membrane protein, put	0.630	0.707	0.293	4.4e-13
MGI|MGI:2140359	381	Tmem64 "transmembrane protein	0.634	0.427	0.281	2.5e-12
ZFIN|ZDB-GENE-060503-182	348	tmem64 "transmembrane protein	0.645	0.477	0.289	4.2e-12
UNIPROTKB|Q6YI46	380	TMEM64 "Transmembrane protein	0.634	0.428	0.270	2.2e-10
UNIPROTKB|Q0C554	250	HNE_0409 "Putative membrane pr	0.501	0.516	0.308	4.2e-10
TAIR|locus:2056246	320	AT2G02370 "AT2G02370" [Arabido	0.715	0.575	0.248	2.4e-09

TAIR|locus:2179654 AT5G19070 [Arabidopsis thaliana (taxid:3702)]

 Score = 807 (289.1 bits), Expect = 5.7e-86, Sum P(2) = 5.7e-86
 Identities = 153/215 (71%), Positives = 174/215 (80%)

Query:     1 MAFTWGSXXXXXXXXXXXXXXXXXCFTLPVEKILKDFLTWVDQDLGPWGPLVLAVAYIPL 60
             MAFTWGS                 C+ LPVEK+LKDFL WV+QDLGPWGP  LAVAYIPL
Sbjct:     1 MAFTWGSALRISVLLILVAAIVLACYFLPVEKLLKDFLLWVEQDLGPWGPFALAVAYIPL 60

Query:    61 TILAVPASVLTLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQF 120
             T+LAVPASVLTLGGGYLFGLP+GFVADS+GAT+G+GAAFLLGRTIGKPFV++KLKDYPQF
Sbjct:    61 TVLAVPASVLTLGGGYLFGLPIGFVADSVGATLGSGAAFLLGRTIGKPFVVAKLKDYPQF 120

Query:   121 RSVALAIQRSGFKIXXXXXXXXXXXFNMLNYLLSVTPVPLLEYMLASWIGMMPITLALVY 180
             +SVALAI++SGFKI           F+MLNYLLSVTP+ L  Y+L+SW+GMMPITLALVY
Sbjct:   121 QSVALAIEKSGFKICLLLRLAPLLPFSMLNYLLSVTPIRLGPYLLSSWLGMMPITLALVY 180

Query:   181 VGTTLKDLSDVTHGWNEFSKTRWAFLIFGLVVSAL 215
             VGTTLKDLSDVTH W+EFS  RWAFLI  LV+S +
Sbjct:   181 VGTTLKDLSDVTHKWSEFSPGRWAFLISSLVISVI 215

GO:0005886 "plasma membrane" evidence=ISM

GO:0015824 "proline transport" evidence=RCA

TAIR|locus:2014530 AT1G03260 [Arabidopsis thaliana (taxid:3702)]

 Score = 695 (249.7 bits), Expect = 4.1e-73, Sum P(2) = 4.1e-73
 Identities = 132/188 (70%), Positives = 158/188 (84%)

Query:    28 LPVEKILKDFLTWVDQDLGPWGPLVLAVAYIPLTILAVPASVLTLGGGYLFGLPVGFVAD 87
             LPVE+ LKDFL W+ +DLGP+GPL LA+AYIPLTI+AVPASVLTLGGGYLFGLPVGFVAD
Sbjct:    30 LPVEQKLKDFLLWIKEDLGPFGPLALALAYIPLTIVAVPASVLTLGGGYLFGLPVGFVAD 89

Query:    88 SIGATIGAGAAFLLGRTIGKPFVISKLKDYPQFRSVALAIQRSGFKIXXXXXXXXXXXFN 147
             S+GAT+GA AAFLLGRTIGK +V SK+K YP+F++V++AIQ+SGFKI           FN
Sbjct:    90 SLGATLGATAAFLLGRTIGKSYVTSKIKHYPKFQAVSVAIQKSGFKIVLLLRVVPILPFN 149

Query:   148 MLNYLLSVTPVPLLEYMLASWIGMMPITLALVYVGTTLKDLSDVTHGWNEFSKTRWAFLI 207
             MLNYLLSVTPV L EYMLA+W+GMMPIT ALVYVGTTLKDLSD+THGW+E S  RW  ++
Sbjct:   150 MLNYLLSVTPVRLGEYMLATWLGMMPITFALVYVGTTLKDLSDITHGWHEVSVFRWVIMM 209

Query:   208 FGLVVSAL 215
              G+ ++ +
Sbjct:   210 VGVALAVI 217

GO:0005886 "plasma membrane" evidence=ISM

GO:0005829 "cytosol" evidence=IDA

TAIR|locus:2017769 AT1G22850 "AT1G22850" [Arabidopsis thaliana (taxid:3702)]

 Score = 221 (82.9 bits), Expect = 3.7e-18, P = 3.7e-18
 Identities = 61/192 (31%), Positives = 97/192 (50%)

Query:    30 VEKILKDFLTWVDQDLGPWGPLVLAVAYIPLTILAVPASVLTLGGGYLFGLPVGFVADSI 89
             +   L  F T+++   G  G  +    Y  L ILA+PA  LT+  G LFG  +G +  SI
Sbjct:   134 INTFLTQFSTYIE-GYGTAGYALFIAVYAGLEILAIPALPLTMSAGLLFGPLIGTIIVSI 192

Query:    90 GATIGAGAAFLLGRTIGKPFVISKLKDYPQFRSVALAIQRSGFKIXXXXXXXXXXXFNML 149
               T+ A  AFL+ R   +  ++  ++D  +F ++  AI  +GF++           F++ 
Sbjct:   193 SGTMAASVAFLIARYFARERILKLVEDNKKFLAIDKAIGENGFRVVTLLRLSPLLPFSLG 252

Query:   150 NYLLSVTPVPLLEYMLASWIGMMPITLALVYVGT----TLKDLSDV-THGWNEFSKTRWA 204
             NYL  +T V  + Y+L SW+GM+P + A V  G      +++ S+V   G N    T   
Sbjct:   253 NYLYGLTSVKFVPYVLGSWLGMLPGSWAYVSAGAFGRAIIQEESNVGLPGGNGQLLT--- 309

Query:   205 FLIFGLVVSALA 216
              L  GL+V+ALA
Sbjct:   310 -LGVGLLVTALA 320

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=IDA

GO:0010264 "myo-inositol hexakisphosphate biosynthetic process" evidence=RCA

UNIPROTKB|Q9KRB9 VC_1723 "Putative uncharacterized protein" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)]

 Score = 172 (65.6 bits), Expect = 4.4e-13, P = 4.4e-13
 Identities = 49/167 (29%), Positives = 83/167 (49%)

Query:    27 TLPVEKILK-DFLTWVDQDLGPWGPLVLAVAYIPLTILAVP-ASVLTLGGGYLFGLPVGF 84
             TL V K  + +   ++D  L     L+  V Y+ LT  ++P A+V+TL G  LFG  +  
Sbjct:    27 TLDVAKAKQAELANYIDAHLLQ-AALIYFVVYVLLTAFSIPGATVVTLLGAALFGFWLSL 85

Query:    85 VADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQFRSVALAIQRSGFKIXXXXXXXXXX 144
             +  S  +TIGA  AFL  R + + +V +K  D  + +++   I+R G             
Sbjct:    86 LLASFASTIGATLAFLSSRFLLRDWVQAKFAD--KLQTINQGIERDGAFYLLSLRLIPIF 143

Query:   145 XFNMLNYLLSVTPVPLLEYMLASWIGMMPITLALVYVGTTLKDLSDV 191
              F ++N ++ +TP+    Y   S +GM+P T   +  GT L ++S +
Sbjct:   144 PFFLINLVMGLTPISTWRYYWVSQLGMLPGTAVYLNAGTQLAEISSL 190

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

TIGR_CMR|VC_1723 VC_1723 "membrane protein, putative" [Vibrio cholerae O1 biovar El Tor (taxid:686)]

 Score = 172 (65.6 bits), Expect = 4.4e-13, P = 4.4e-13
 Identities = 49/167 (29%), Positives = 83/167 (49%)

Query:    27 TLPVEKILK-DFLTWVDQDLGPWGPLVLAVAYIPLTILAVP-ASVLTLGGGYLFGLPVGF 84
             TL V K  + +   ++D  L     L+  V Y+ LT  ++P A+V+TL G  LFG  +  
Sbjct:    27 TLDVAKAKQAELANYIDAHLLQ-AALIYFVVYVLLTAFSIPGATVVTLLGAALFGFWLSL 85

Query:    85 VADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQFRSVALAIQRSGFKIXXXXXXXXXX 144
             +  S  +TIGA  AFL  R + + +V +K  D  + +++   I+R G             
Sbjct:    86 LLASFASTIGATLAFLSSRFLLRDWVQAKFAD--KLQTINQGIERDGAFYLLSLRLIPIF 143

Query:   145 XFNMLNYLLSVTPVPLLEYMLASWIGMMPITLALVYVGTTLKDLSDV 191
              F ++N ++ +TP+    Y   S +GM+P T   +  GT L ++S +
Sbjct:   144 PFFLINLVMGLTPISTWRYYWVSQLGMLPGTAVYLNAGTQLAEISSL 190

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

MGI|MGI:2140359 Tmem64 "transmembrane protein 64" [Mus musculus (taxid:10090)]

 Score = 171 (65.3 bits), Expect = 2.5e-12, P = 2.5e-12
 Identities = 49/174 (28%), Positives = 87/174 (50%)

Query:    25 CF-TLP-VEKILKDFLTWVDQDLGPWGPLVLAVAYIPLTILAVPAS----VLTLGGGYLF 78
             CF +L  V + L+  L WV+      G L+  V +I   +++ P      VL +  GYL+
Sbjct:   134 CFASLALVRRYLQHLLLWVESLDSLLGVLLFVVGFI---VVSFPCGWGYIVLNVAAGYLY 190

Query:    79 GLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQFRSVALAIQR-SGFKIXXX 137
             G  +G     +G  IG   A ++ + +   +V +++++  +  +V   ++  SG K+   
Sbjct:   191 GFVLGMGLMVVGVLIGTFIAHVVCKRLLTAWVAARIQNSDKLSAVIRVVEGGSGLKVVAL 250

Query:   138 XXXXXXXXFNMLNYLLSVTPVPLLEYMLASWIGMMPITLALVYVGTTLKDLSDV 191
                     F + N + S+T VPL  Y++AS  G++P  L   Y+GTTL+ + DV
Sbjct:   251 ARLTPIP-FGLQNAVFSITDVPLPSYLMASSAGLLPTQLLNSYLGTTLRTMEDV 303

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

ZFIN|ZDB-GENE-060503-182 tmem64 "transmembrane protein 64" [Danio rerio (taxid:7955)]

 Score = 168 (64.2 bits), Expect = 4.2e-12, P = 4.2e-12
 Identities = 50/173 (28%), Positives = 84/173 (48%)

Query:    25 CFTLP--VEKILKDFLTWVDQDLGPWGPLVLAVAYIPLTI-LAVPASVLTLGGGYLFGLP 81
             CF+    V + LKD L WV+      G ++  V  I ++        VL +  GYL+G  
Sbjct:   100 CFSSVALVRQYLKDVLLWVESLDSLVGAMLFIVGLITVSFPCGWGYIVLNVAAGYLYGFV 159

Query:    82 VGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQFRSVALAIQR-SGFKIXXXXXX 140
             +G     +G  IG   A ++ + +   +V+SK+    Q  +V   ++  SG K+      
Sbjct:   160 LGMGLVMVGVLIGTFIAHVVCKRLLTNWVLSKIGSSEQLSAVIRVVEGGSGLKVVALARL 219

Query:   141 XXXXXFNMLN--YLLSVTPVPLLEYMLASWIGMMPITLALVYVGTTLKDLSDV 191
                  F + N  + +S+T V L  Y++AS +G++P  L   Y+GTTL+ + DV
Sbjct:   220 TPIP-FGLQNAVFSVSITDVSLPNYLVASSVGLLPTQLLNSYLGTTLRTMEDV 271

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|Q6YI46 TMEM64 "Transmembrane protein 64" [Homo sapiens (taxid:9606)]

 Score = 162 (62.1 bits), Expect = 2.2e-10, P = 2.2e-10
 Identities = 47/174 (27%), Positives = 85/174 (48%)

Query:    25 CF-TLP-VEKILKDFLTWVDQDLGPWGPLVLAVAYIPLTILAVPAS----VLTLGGGYLF 78
             CF +L  V + L   L WV+      G L+  V +I   +++ P      VL +  GYL+
Sbjct:   133 CFASLALVRRYLHHLLLWVESLDSLLGVLLFVVGFI---VVSFPCGWGYIVLNVAAGYLY 189

Query:    79 GLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQFRSVALAIQR-SGFKIXXX 137
             G  +G     +G  IG   A ++ + +   +V ++++   +  +V   ++  SG K+   
Sbjct:   190 GFVLGMGLMMVGVLIGTFIAHVVCKRLLTAWVAARIQSSEKLSAVIRVVEGGSGLKVVAL 249

Query:   138 XXXXXXXXFNMLNYLLSVTPVPLLEYMLASWIGMMPITLALVYVGTTLKDLSDV 191
                     F + N + S+T + L  Y++AS +G++P  L   Y+GTTL+ + DV
Sbjct:   250 ARLTPIP-FGLQNAVFSITDLSLPNYLMASSVGLLPTQLLNSYLGTTLRTMEDV 302

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|Q0C554 HNE_0409 "Putative membrane protein" [Hyphomonas neptunium ATCC 15444 (taxid:228405)]

 Score = 156 (60.0 bits), Expect = 4.2e-10, P = 4.2e-10
 Identities = 41/133 (30%), Positives = 63/133 (47%)

Query:    55 VAYIPLTILAVPASVLTLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRT-IGKPFVISK 113
             + Y   T   VP S LT+GGG+LFGL +G  A  IGATIGA   F   +T IG   V+  
Sbjct:    74 LVYAAATTFMVPGSALTIGGGFLFGLALGTPATVIGATIGASILFFASKTSIGA--VLRD 131

Query:   114 LKDYPQFRSVALAIQRSGFKIXXXXXXXXXXXFNMLNYLLSVTPVPLLEYMLASWIGMMP 173
             +   P    +      S F             F  +N   ++      +Y++ +++G++P
Sbjct:   132 VAG-PFLGKMQAGFAESPFSYMFALRLIPLFPFAAVNIAPALLGAKYRDYLITTFLGIIP 190

Query:   174 ITLALVYVGTTLK 186
              TLA  ++G  +K
Sbjct:   191 GTLAYTWIGAAVK 203

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2056246 AT2G02370 "AT2G02370" [Arabidopsis thaliana (taxid:3702)]

 Score = 154 (59.3 bits), Expect = 2.4e-09, P = 2.4e-09
 Identities = 47/189 (24%), Positives = 80/189 (42%)

Query:    31 EKILKDFLTWVDQDLG-PWGPLVLAVAYIPLTILAVPASVLTLGGGYLFGLPVGFVADSI 89
             +K+L   L W     G P   +VL V+     +  +P+       G +FG  +GFV   +
Sbjct:    82 QKVLIPILQWEATAFGRPMLAIVLVVSLALFPVFLIPSGPSMWLAGMIFGYGLGFVIIMV 141

Query:    90 GATIGAGAAFLLGRTIGKPFVISKLKDYPQFRSVA-LAIQRSGFKIXXXXXXXXXXXF-- 146
             G TIG    +L+G    +  +   LK +P+  +V  LA + S F             F  
Sbjct:   142 GTTIGMVLPYLIGLMF-RDRLHQWLKRWPRQAAVLRLAAEGSWFHQFRVVAIFRVSPFPY 200

Query:   147 NMLNYLLSVTPVPLLEYMLASWIGMMPITLALVYVGTTLKDLSDVTHGWNEFSKTRWAFL 206
              + NY + VT +    Y   S  GM+P     +Y G  ++  +DV +G    +     + 
Sbjct:   201 TIFNYAIVVTSMRFWPYFFGSIAGMIPEAFIYIYSGRLIRTFADVQYGHQRLTTVEIVYN 260

Query:   207 IFGLVVSAL 215
             +  LV++ +
Sbjct:   261 VISLVIAVV 269

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: estExt_Genewise1_v1.C_LG_X4091 hypothetical protein (275 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	257
COG0398	223	COG0398, COG0398, Uncharacterized conserved protei	8e-29
pfam09335	123	pfam09335, SNARE_assoc, SNARE associated Golgi pro	4e-22
COG0586	208	COG0586, DedA, Uncharacterized membrane-associated	7e-04

>gnl|CDD|223475 COG0398, COG0398, Uncharacterized conserved protein [Function unknown]

 Score =  108 bits (272), Expect = 8e-29
 Identities = 54/183 (29%), Positives = 100/183 (54%), Gaps = 3/183 (1%)

Query: 7   SALRITLLILLVAAVVTACFTLPVEKILKDFLTWVDQDLGPWGPLVLAVA-YIPLTILAV 65
             L   L + ++  ++     + +    +    W+    G  GPLV  +  Y+  T+  +
Sbjct: 9   KLLAALLFLGVIIGIIYLGLLVLLL-DPETLREWIQA-YGALGPLVFFILLYLVATLPII 66

Query: 66  PASVLTLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQFRSVAL 125
           P S+LTL GG LFG  +GF+   IGAT G+  AFLL R +G+ +V+  +    + + +  
Sbjct: 67  PGSILTLAGGLLFGPFLGFLYSLIGATAGSTLAFLLARYLGRDWVLKFVGGKEKVQRIDA 126

Query: 126 AIQRSGFKIVLLLRLVPLLPFNMLNYLLSVTPVPLLEYMLASWIGMMPITLALVYVGTTL 185
            ++R+GF  +LLLRL+P+ PF+++NY   +T +   ++ +A+ +G +P T+   Y+G+  
Sbjct: 127 GLERNGFWAILLLRLIPIFPFDLVNYAAGLTGISFRDFAIATLLGKLPGTIVYTYLGSAF 186

Query: 186 KDL 188
             +
Sbjct: 187 LGI 189

Length = 223

>gnl|CDD|220186 pfam09335, SNARE_assoc, SNARE associated Golgi protein

 Score = 87.7 bits (218), Expect = 4e-22
 Identities = 42/121 (34%), Positives = 75/121 (61%), Gaps = 3/121 (2%)

Query: 65  VPASVLTLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQFR--- 121
           +P +VL +  G LFG  +GF+   +GA +G+  A+LLGR +G+  +  +L     F+   
Sbjct: 1   LPGTVLLIAAGALFGPWLGFLVALLGALLGSLLAYLLGRYLGRRALRRRLLKEKAFQRLQ 60

Query: 122 SVALAIQRSGFKIVLLLRLVPLLPFNMLNYLLSVTPVPLLEYMLASWIGMMPITLALVYV 181
            V   ++R GFK +LLLRL+P +P +++NY+  ++ V    ++L +++G++P  L  VY+
Sbjct: 61  RVERLVERYGFKALLLLRLLPGVPRDLVNYVAGLSRVSFRRFLLGTFLGILPWALLYVYL 120

Query: 182 G 182
           G
Sbjct: 121 G 121

This is a family of SNARE associated Golgi proteins. The yeast member of this family localises with the t-SNARE Tlg2. Length = 123

>gnl|CDD|223659 COG0586, DedA, Uncharacterized membrane-associated protein [Function unknown]

 Score = 39.6 bits (93), Expect = 7e-04
 Identities = 33/149 (22%), Positives = 64/149 (42%), Gaps = 13/149 (8%)

Query: 45  LGPWGPLVLAVAYIPLTILA-VPASVLTLGGGYL-----FGLPVGFVADSIGATIGAGAA 98
           LG  G  ++      L +   +P  VL L  G L       L +  +  ++GA +G   +
Sbjct: 15  LGYLGVFLILFLESGLLVGPPLPGEVLLLLAGALAAQGKLNLWLVILVATLGALLGDLIS 74

Query: 99  FLLGRTIGKPFVISKLKDYPQFRSVALA-----IQRSGFKIVLLLRLVPLLPFNMLNYLL 153
           + +GR  G+   + KL  Y   +   L       +R G   + L R +P +   ++  + 
Sbjct: 75  YWIGRRFGRKL-LRKLWSYRLLKRKKLDKAELLFERHGLFAIFLGRFIPGVR-TLVPIVA 132

Query: 154 SVTPVPLLEYMLASWIGMMPITLALVYVG 182
            ++ +PL  ++L + +G +   L L  +G
Sbjct: 133 GMSKMPLRRFLLYNILGALLWALVLTLLG 161

Length = 208

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	257
COG0398	223	Uncharacterized conserved protein [Function unknow	99.97
COG0586	208	DedA Uncharacterized membrane-associated protein [	99.94
PRK10847	219	hypothetical protein; Provisional	99.94
PF09335	123	SNARE_assoc: SNARE associated Golgi protein; Inter	99.9
COG1238	161	Predicted membrane protein [Function unknown]	99.71
KOG3140	275	consensus Predicted membrane protein [Function unk	99.59
PF06695	121	Sm_multidrug_ex: Putative small multi-drug export	97.32
PF12794	340	MscS_TM: Mechanosensitive ion channel inner membra	88.98
PF06695	121	Sm_multidrug_ex: Putative small multi-drug export	86.47
PRK01844	72	hypothetical protein; Provisional	85.51
PRK00523	72	hypothetical protein; Provisional	82.99
PRK14397	222	membrane protein; Provisional	80.27

>COG0398 Uncharacterized conserved protein [Function unknown]

Probab=99.97  E-value=1.2e-28  Score=207.93  Aligned_cols=153  Identities=34%  Similarity=0.700  Sum_probs=142.0

Q ss_pred             HHHHHHHHHHHHhcCCChHHHH-HHHHHHhhhcccCchHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHhChHH
Q 025120           31 EKILKDFLTWVDQDLGPWGPLV-LAVAYIPLTILAVPASVLTLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPF  109 (257)
Q Consensus        31 ~~~l~~l~~~~~~~~g~~~~~~-~~~~~~~~~~~~iP~~~~~~~~G~~~g~~~~~~~~~~g~~lG~~~~y~igR~~g~~~  109 (257)
                      .+..+++.+|++ +++.++++. |++.++...++++|++++.+++|.+||+++|++++++|+++|+.++|+++|++|+++
T Consensus        32 ~~~~~~l~~~i~-~~g~~~pl~~fil~~l~~~~~~iP~~il~l~~g~ifG~~~G~~~s~~G~~~gs~~~Fll~R~~gr~~  110 (223)
T COG0398          32 LLDPETLREWIQ-AYGALGPLVFFILLYLVATLPIIPGSILTLAGGLLFGPFLGFLYSLIGATAGSTLAFLLARYLGRDW  110 (223)
T ss_pred             ccCHHHHHHHHH-HcCchHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhHHH
Confidence            445688999999 789999998 555555666667999999999999999999999999999999999999999999999


Q ss_pred             HHHhhcCchHHHHHHHHHHhcCchhhhHHhhcCCCchhHhhHhhhcccCChhhHHHHHHHhHHHHHHHHHHHHhh
Q 025120          110 VISKLKDYPQFRSVALAIQRSGFKIVLLLRLVPLLPFNMLNYLLSVTPVPLLEYMLASWIGMMPITLALVYVGTT  184 (257)
Q Consensus       110 ~~~~~~~~~~~~~~~~~~~~~g~~~v~~~r~~P~~p~~~~~~~aG~~~~~~~~f~~~~~lg~~p~~~~~~~~G~~  184 (257)
                      .+++..++++.++.++.++|+|++.+++.|++|++|++++||++|++++++++|.+++.+|++|+++.|+++|+.
T Consensus       111 ~~~~~~~~~~~~~~~~~~~~~g~~~i~~lrl~P~~P~~lvn~aaglt~is~~~f~ias~lG~~P~~i~y~~~G~~  185 (223)
T COG0398         111 VLKFVGGKEKVQRIDAGLERNGFWAILLLRLIPIFPFDLVNYAAGLTGISFRDFAIATLLGKLPGTIVYTYLGSA  185 (223)
T ss_pred             HHHHhcccHHHHHHHHHHHhCChHHHHHHHHhhcCCHHHHHHHHhccCCcHHHHHHHHHHhcccHHHHHHHHHHH
Confidence            999888888999999999999999999999999999999999999999999999999999999999999999963

>COG0586 DedA Uncharacterized membrane-associated protein [Function unknown]

Probab=99.94  E-value=5.6e-26  Score=190.48  Aligned_cols=138  Identities=21%  Similarity=0.410  Sum_probs=124.8

Q ss_pred             HHHHHHHhh---hcccCchHHHHHHHHHh-----hhHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHhhc----CchH
Q 025120           52 VLAVAYIPL---TILAVPASVLTLGGGYL-----FGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLK----DYPQ  119 (257)
Q Consensus        52 ~~~~~~~~~---~~~~iP~~~~~~~~G~~-----~g~~~~~~~~~~g~~lG~~~~y~igR~~g~~~~~~~~~----~~~~  119 (257)
                      +|...+.+.   ...|+|++++++.+|++     ++++..++++++|+++||.++|++||++|++..+++.+    ++++
T Consensus        20 ~f~~~f~e~~l~~~~~lPge~iL~~~G~l~~~g~~~~~~~i~~~~lga~lGd~i~Y~iGr~~G~~~l~~~~~~~~~~~~~   99 (208)
T COG0586          20 VFLILFLESGLLVGPPLPGEVLLLLAGALAAQGKLNLWLVILVATLGALLGDLISYWIGRRFGRKLLRKLWSYRLLKRKK   99 (208)
T ss_pred             HHHHHHHHHHHHcCCCCCchHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcHHHHHhhhhhccCCHHH
Confidence            444445444   56679999999999998     56889999999999999999999999999998887665    4678


Q ss_pred             HHHHHHHHHhcCchhhhHHhhcCCCchhHhhHhhhcccCChhhHHHHHHHhHHHHHHHHHHHHhhhccchh
Q 025120          120 FRSVALAIQRSGFKIVLLLRLVPLLPFNMLNYLLSVTPVPLLEYMLASWIGMMPITLALVYVGTTLKDLSD  190 (257)
Q Consensus       120 ~~~~~~~~~~~g~~~v~~~r~~P~~p~~~~~~~aG~~~~~~~~f~~~~~lg~~p~~~~~~~~G~~l~~~~~  190 (257)
                      ++|.+++++|||.++++++||+|++| +++++.||+++||+++|...|++|+++|+.++++.|+.+++..+
T Consensus       100 l~~a~~~f~r~G~~~vf~~RFip~vR-t~ip~~AG~~~m~~~~F~~~n~~ga~iW~~~~~~lGy~~G~~~~  169 (208)
T COG0586         100 LDKAELLFERHGLFAIFLGRFIPGVR-TLVPIVAGMSKMPLRRFLLYNILGALLWALVLTLLGYLLGEVID  169 (208)
T ss_pred             HHHHHHHHHHcCchhhhhhcccchhH-hhhhHhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHhccchH
Confidence            99999999999999999999999999 99999999999999999999999999999999999999987655

>PRK10847 hypothetical protein; Provisional

Probab=99.94  E-value=1.3e-25  Score=189.85  Aligned_cols=152  Identities=16%  Similarity=0.285  Sum_probs=127.0

Q ss_pred             HHHHHHhcCCChHHH-HHHHHHHhh---hcccCchHHHHHHHHHhh-------hHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 025120           37 FLTWVDQDLGPWGPL-VLAVAYIPL---TILAVPASVLTLGGGYLF-------GLPVGFVADSIGATIGAGAAFLLGRTI  105 (257)
Q Consensus        37 l~~~~~~~~g~~~~~-~~~~~~~~~---~~~~iP~~~~~~~~G~~~-------g~~~~~~~~~~g~~lG~~~~y~igR~~  105 (257)
                      +.++++ +++++++. +++..+.+.   ...++|++++.+++|.+.       +++..++++++|+++|+.++|++||+.
T Consensus        18 ~~~~~~-~~g~~~y~~lfl~~~le~~~~~~~~lPge~~l~~~G~la~~~~~~~~~~~~~~~a~~Ga~lG~~i~Y~lGr~~   96 (219)
T PRK10847         18 LAELVA-QYGVWVYAILFLILFCETGLVVTPFLPGDSLLFVAGALASLPTNDLNVHMMVALMLIAAIVGDAVNYTIGRLF   96 (219)
T ss_pred             HHHHHH-HhhHHHHHHHHHHHHHHhccccCCCCCchHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            345565 78888765 444444443   234589999888888774       366789999999999999999999999


Q ss_pred             ChHHHHHh---hcCchHHHHHHHHHHhcCchhhhHHhhcCCCchhHhhHhhhcccCChhhHHHHHHHhHHHHHHHHHHHH
Q 025120          106 GKPFVISK---LKDYPQFRSVALAIQRSGFKIVLLLRLVPLLPFNMLNYLLSVTPVPLLEYMLASWIGMMPITLALVYVG  182 (257)
Q Consensus       106 g~~~~~~~---~~~~~~~~~~~~~~~~~g~~~v~~~r~~P~~p~~~~~~~aG~~~~~~~~f~~~~~lg~~p~~~~~~~~G  182 (257)
                      |++...++   ..++++++|.+++++|||.+.++++||+|++| +++|+.+|+++||+++|+..|.+|+++|+..++++|
T Consensus        97 G~~~l~~~~~~~~~~~~l~~~~~~~~r~G~~~v~i~RfiP~~R-~~~~~~aG~~~m~~~~F~~~~~lg~~~W~~~~~~~G  175 (219)
T PRK10847         97 GEKLFSNPNSKIFRRSYLDKTHQFYEKHGGKTIILARFVPIVR-TFAPFVAGMGHMSYRHFAAYNVIGALLWVLLFTYAG  175 (219)
T ss_pred             CHHHhhccccccCCHHHHHHHHHHHHHcCCEEEEeeCCccchH-hHHHHHhHhcCCChHHHHHHHHHHHHHHHHHHHHHH
Confidence            99887532   22346789999999999999999999999999 899999999999999999999999999999999999


Q ss_pred             hhhccchh
Q 025120          183 TTLKDLSD  190 (257)
Q Consensus       183 ~~l~~~~~  190 (257)
                      +.+++...
T Consensus       176 y~~g~~~~  183 (219)
T PRK10847        176 YFFGTLPF  183 (219)
T ss_pred             HHHcCCHH
Confidence            99987643

>PF09335 SNARE_assoc: SNARE associated Golgi protein; InterPro: IPR015414 This is a entry contains SNARE associated Golgi proteins

Probab=99.90  E-value=4e-23  Score=159.04  Aligned_cols=120  Identities=36%  Similarity=0.686  Sum_probs=110.8

Q ss_pred             CchHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHhhcCchHHHH---HHHHHHhcCchhhhHHhhc
Q 025120           65 VPASVLTLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQFRS---VALAIQRSGFKIVLLLRLV  141 (257)
Q Consensus        65 iP~~~~~~~~G~~~g~~~~~~~~~~g~~lG~~~~y~igR~~g~~~~~~~~~~~~~~~~---~~~~~~~~g~~~v~~~r~~  141 (257)
                      +|++++++++|+++|++.+++++++|+++|+.++|++||+++++...++..++++.++   .++.++|||.+.++++|++
T Consensus         1 iP~~~~~~~~g~~~g~~~~~~~~~~g~~~g~~~~y~lgr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~   80 (123)
T PF09335_consen    1 IPGSILLIAAGALFGPWLGFLIATLGAVLGSLLAYLLGRYFGRRRLRRKLRKKKRIKRIERIERWFQKYGFWVLFLSRFI   80 (123)
T ss_pred             CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchHHHHHHHHHHHHHhhhhHHHHHHHHHH
Confidence            6999999999999999999999999999999999999999997666666655555555   8899999999999999999


Q ss_pred             CCCchhHhhHhhhcccCChhhHHHHHHHhHHHHHHHHHHHHhh
Q 025120          142 PLLPFNMLNYLLSVTPVPLLEYMLASWIGMMPITLALVYVGTT  184 (257)
Q Consensus       142 P~~p~~~~~~~aG~~~~~~~~f~~~~~lg~~p~~~~~~~~G~~  184 (257)
                      |++|++++|+++|++++|+++|+.++++|.+||+.+++++|+.
T Consensus        81 P~~P~~~~~~~ag~~~~~~~~f~~~~~~g~~~~~~~~~~~G~~  123 (123)
T PF09335_consen   81 PGLPFDVVNYLAGITRMPFRRFFLASLIGKLPWTILYVLLGYL  123 (123)
T ss_pred             HHccHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            9999999999999999999999999999999999999999973

The yeast member of this family (P36164 from SWISSPROT) localises with the t-SNARE Tlg2 [].

>COG1238 Predicted membrane protein [Function unknown]

Probab=99.71  E-value=4.1e-16  Score=124.46  Aligned_cols=149  Identities=20%  Similarity=0.242  Sum_probs=123.6

Q ss_pred             HHHHHHHHHhcCCChHHHHHHHHHHhhhcccCchHHHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHH
Q 025120           34 LKDFLTWVDQDLGPWGPLVLAVAYIPLTILAVPASVLTLGGGYL-FGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVIS  112 (257)
Q Consensus        34 l~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~iP~~~~~~~~G~~-~g~~~~~~~~~~g~~lG~~~~y~igR~~g~~~~~~  112 (257)
                      .++..++..+.+++++  +|+..++..+++|+|+|++....-.. .+++...+++++|+++|+.++|++||..++...++
T Consensus         6 ~~~~~~~~~~~~a~~~--Lf~vaF~eat~lP~~sE~~l~~m~~~~~~~~~~~~vAt~gs~lG~~~~y~lG~~~~~~~~~~   83 (161)
T COG1238           6 YDWTLSLMSQAYAYAG--LFIVAFLEATLLPVPSEVLLAPMLLLGLNAWILALVATLGSVLGGLVNYALGRFLPEFIARR   83 (161)
T ss_pred             HHHHHHHHHHHHHHHH--HHHHHHHHHHhcCCChHHHHHHHHHcCCchHHHHHHHHHHhhHhHHHHHHHHhcchHHHHHH
Confidence            3444555555555544  77888899999999999765544433 78999999999999999999999999998877775


Q ss_pred             hhc-CchHHHHHHH-HHHhcCchhhhHHhhcCCCchhHhhHhhhcccCChhhHHHHHHHhHHHHHHHHHHHHhhhc
Q 025120          113 KLK-DYPQFRSVAL-AIQRSGFKIVLLLRLVPLLPFNMLNYLLSVTPVPLLEYMLASWIGMMPITLALVYVGTTLK  186 (257)
Q Consensus       113 ~~~-~~~~~~~~~~-~~~~~g~~~v~~~r~~P~~p~~~~~~~aG~~~~~~~~f~~~~~lg~~p~~~~~~~~G~~l~  186 (257)
                      +.. ++++.++.++ ..+|+|.+.++++-+.| +| ++++.++|..++|+++|+...++|+.++-.+.+++....+
T Consensus        84 ~~~~~~~~~~~~~~~~~~ryg~~~ll~s~lp~-ig-d~~t~~aG~~~~~~~~f~~~~~igk~~Ry~~la~~~~~~~  157 (161)
T COG1238          84 WFPGSEEALEKLQEKWYRRYGVWTLLLSWLPP-IG-DVLTLLAGWLRLNFLPFILLVFLGKAARYLLLAALTLLGG  157 (161)
T ss_pred             hhcchHHHHHHHHHHHHHHHHHHHHHHHhccc-cc-hHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence            443 3566777776 78999999999999977 89 9999999999999999999999999999999988877654

>KOG3140 consensus Predicted membrane protein [Function unknown]

Probab=99.59  E-value=1e-14  Score=125.67  Aligned_cols=176  Identities=27%  Similarity=0.447  Sum_probs=139.3

Q ss_pred             cCCChHHHHHHHHHHhhhcccCchH-HHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHhhcCchHHHH
Q 025120           44 DLGPWGPLVLAVAYIPLTILAVPAS-VLTLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQFRS  122 (257)
Q Consensus        44 ~~g~~~~~~~~~~~~~~~~~~iP~~-~~~~~~G~~~g~~~~~~~~~~g~~lG~~~~y~igR~~g~~~~~~~~~~~~~~~~  122 (257)
                      .+.....+.|+..+.....+++|+. ...+.+|.++|.+.|.+.++..+.+|++.||.+++.+||+++.+++..+.++-+
T Consensus        91 ~~~a~~~~~~~~~y~f~qtfaipG~~fls~~aG~l~~~~~g~~Lv~~~~~~ga~~cy~lS~~f~r~~v~~l~p~~~~~~~  170 (275)
T KOG3140|consen   91 TYFAAVLLGFIAAYVFLQTFAIPGSIFLSLLAGALFGVFKGVLLVCLLSTLGASLCYLLSKLFGRPLVLKLFPDKIAFLQ  170 (275)
T ss_pred             hhHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHhhccceEEeeeeeccchhHHHHHHHHHHHhHHHHHHHhHHHHHHHH
Confidence            4444456778888889999999976 688999999999999999999999999999999999999999988765333333


Q ss_pred             HHHHHHhcC-chhhhHHhhcCCCchhHhhHhhhcccCChhhHHHHHHHhHHHHHHHHHHHHhhhccchhhcccccccchh
Q 025120          123 VALAIQRSG-FKIVLLLRLVPLLPFNMLNYLLSVTPVPLLEYMLASWIGMMPITLALVYVGTTLKDLSDVTHGWNEFSKT  201 (257)
Q Consensus       123 ~~~~~~~~g-~~~v~~~r~~P~~p~~~~~~~aG~~~~~~~~f~~~~~lg~~p~~~~~~~~G~~l~~~~~~~~~~~~~~~~  201 (257)
                      .+...+|++ +..+.+.|.+|..|+.+.|+++++.++|.+.|++++++|.+|.++++.-.|..++++.+..+.....+..
T Consensus       171 ~~~~~~~~~~~~~~~~lrlsp~~pnw~~n~~spvl~Vp~~~f~~~~~~gl~p~s~i~v~ags~l~~l~s~~~~~~~~~~~  250 (275)
T KOG3140|consen  171 QDVELNRNSLLNYMLFLRLSPFLPNWVINIVSPVLGVPLRIFFIGTFKGLIPYSFIEVRAGSTLASLTSASDAFSWSSIL  250 (275)
T ss_pred             HHHHhcccchhhhhhhhhhccCCHHHHHHHHHHhhccchHHHHHHHHHhcCchHHHHhhccchHhhhcccccccCCcchH
Confidence            333344555 5668999999999999999999999999999999999999999999999999998877765555433322


Q ss_pred             -HHHHHHHHHHHHHHHhcc
Q 025120          202 -RWAFLIFGLVVSALAENE  219 (257)
Q Consensus       202 -~~~~~~v~~~~~~l~~~~  219 (257)
                       .....++.+.-..+++|+
T Consensus       251 ~l~~~~~~~l~~~~l~kk~  269 (275)
T KOG3140|consen  251 TLLELALLSLLPTLLKKKR  269 (275)
T ss_pred             HHHHHHHHHHhHHHHhhhh
Confidence             223334444444555543

>PF06695 Sm_multidrug_ex: Putative small multi-drug export protein; InterPro: IPR009577 This family contains a small number of putative small multi-drug export proteins

Probab=97.32  E-value=0.0035  Score=48.00  Aligned_cols=97  Identities=16%  Similarity=0.120  Sum_probs=71.4

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHhChHH-----HHHhhcC-chHHHHHHHHHHhcCchhhhHHhhcCCCc---hhH
Q 025120           78 FGLPVGFVADSIGATIGAGAAFLLGRTIGKPF-----VISKLKD-YPQFRSVALAIQRSGFKIVLLLRLVPLLP---FNM  148 (257)
Q Consensus        78 ~g~~~~~~~~~~g~~lG~~~~y~igR~~g~~~-----~~~~~~~-~~~~~~~~~~~~~~g~~~v~~~r~~P~~p---~~~  148 (257)
                      ++++..++++.+|+.+.....++.-++.-+..     .++...+ .++.++-++.+||||++.+.+.-.+| +|   -..
T Consensus        14 l~p~~~~~~~~lGN~l~vp~i~~~~~~i~~~l~~~~~~~~~~~~~~~k~~~~~~~i~kyg~~GL~lFVaIP-lP~TG~wt   92 (121)
T PF06695_consen   14 LPPWEAFLLAFLGNILPVPFILLFLDKILKWLKRKPWLKKFYEWLEKKAEKKSKKIEKYGFWGLALFVAIP-LPGTGAWT   92 (121)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCC-CCcchHHH
Confidence            67889999999999998888777776653322     1211111 23455677789999998888777776 55   567


Q ss_pred             hhHhhhcccCChhhHHHHHHHhHHHHH
Q 025120          149 LNYLLSVTPVPLLEYMLASWIGMMPIT  175 (257)
Q Consensus       149 ~~~~aG~~~~~~~~f~~~~~lg~~p~~  175 (257)
                      -+.++-+.+++.++=+.+..+|.+...
T Consensus        93 gal~a~llg~~~~~~~~ai~~Gv~ia~  119 (121)
T PF06695_consen   93 GALIASLLGMDKKKAFLAIFLGVLIAG  119 (121)
T ss_pred             HHHHHHHhCCCHHHHHHHHHHHHHHHH
Confidence            778888999999999999999976654

>PF12794 MscS_TM: Mechanosensitive ion channel inner membrane domain 1

Probab=88.98  E-value=10  Score=34.25  Aligned_cols=28  Identities=18%  Similarity=0.348  Sum_probs=15.0

Q ss_pred             hhhHHHHHHHhHHHH-HHHHHHHHhhhcc
Q 025120          160 LLEYMLASWIGMMPI-TLALVYVGTTLKD  187 (257)
Q Consensus       160 ~~~f~~~~~lg~~p~-~~~~~~~G~~l~~  187 (257)
                      ..++++...+-..|- ..+.+..||....
T Consensus       195 ~~~~l~~~~li~~Pl~li~la~~GY~yTA  223 (340)
T PF12794_consen  195 RLRYLWWPLLILAPLALIVLALLGYYYTA  223 (340)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhHHHHH
Confidence            444455555444554 4445677776643

>PF06695 Sm_multidrug_ex: Putative small multi-drug export protein; InterPro: IPR009577 This family contains a small number of putative small multi-drug export proteins

Probab=86.47  E-value=12  Score=28.43  Aligned_cols=46  Identities=22%  Similarity=0.327  Sum_probs=28.2

Q ss_pred             cCCChHHHHHHHHHHhhhcccCchH--HHHHHHHHhhh--HHHHHHHHHHHHHHHHH
Q 025120           44 DLGPWGPLVLAVAYIPLTILAVPAS--VLTLGGGYLFG--LPVGFVADSIGATIGAG   96 (257)
Q Consensus        44 ~~g~~~~~~~~~~~~~~~~~~iP~~--~~~~~~G~~~g--~~~~~~~~~~g~~lG~~   96 (257)
                      .++.+|..+|+       ..|+|++  ....+.+.++|  ....+....+|..+++.
T Consensus        71 kyg~~GL~lFV-------aIPlP~TG~wtgal~a~llg~~~~~~~~ai~~Gv~ia~~  120 (121)
T PF06695_consen   71 KYGFWGLALFV-------AIPLPGTGAWTGALIASLLGMDKKKAFLAIFLGVLIAGV  120 (121)
T ss_pred             HHhHHHHHHHH-------hCCCCcchHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHh
Confidence            45655544433       3466754  44455566654  77788888888877764

>PRK01844 hypothetical protein; Provisional

Probab=85.51  E-value=3.8  Score=28.15  Aligned_cols=32  Identities=13%  Similarity=0.334  Sum_probs=24.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhChHHHH
Q 025120           80 LPVGFVADSIGATIGAGAAFLLGRTIGKPFVI  111 (257)
Q Consensus        80 ~~~~~~~~~~g~~lG~~~~y~igR~~g~~~~~  111 (257)
                      .|..+++..++..+|...+|+++|+.-++.+.
T Consensus         3 ~~~~I~l~I~~li~G~~~Gff~ark~~~k~lk   34 (72)
T PRK01844          3 IWLGILVGVVALVAGVALGFFIARKYMMNYLQ   34 (72)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            35556677788999999999999998655444

>PRK00523 hypothetical protein; Provisional

Probab=82.99  E-value=5.6  Score=27.33  Aligned_cols=31  Identities=6%  Similarity=0.037  Sum_probs=23.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhChHHHH
Q 025120           81 PVGFVADSIGATIGAGAAFLLGRTIGKPFVI  111 (257)
Q Consensus        81 ~~~~~~~~~g~~lG~~~~y~igR~~g~~~~~  111 (257)
                      +..+++..++..+|...+|+++|+.-++.+.
T Consensus         5 ~l~I~l~i~~li~G~~~Gffiark~~~k~l~   35 (72)
T PRK00523          5 GLALGLGIPLLIVGGIIGYFVSKKMFKKQIR   35 (72)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3445566777889999999999998665444

>PRK14397 membrane protein; Provisional

Probab=80.27  E-value=35  Score=28.92  Aligned_cols=33  Identities=9%  Similarity=-0.118  Sum_probs=21.9

Q ss_pred             HHHHHHHHHHH-HHHHHHHHhChHHHHHhhcCch
Q 025120           86 ADSIGATIGAG-AAFLLGRTIGKPFVISKLKDYP  118 (257)
Q Consensus        86 ~~~~g~~lG~~-~~y~igR~~g~~~~~~~~~~~~  118 (257)
                      +..++..+|+. .+|+++|.+....+++.-++|.
T Consensus         6 ~~~~~YLlGSip~~~~i~k~~~g~DiR~~GSgN~   39 (222)
T PRK14397          6 WIATAYVMGSIPFGLVFARTFCGIDPRTGGSRNV   39 (222)
T ss_pred             HHHHHHHHHhhhHHHHHHHHhcCCCccccCCCCc
Confidence            34567788886 7999999875544554444443

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00