Citrus Sinensis ID: 025128


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------
MVSQVLVALGLSLVGGLSTSIGALFVVLNEAPNLKVLGLLQGFAAGLMLSISFLDLAHNAINSIGFLKGNLWFFSGVIFFAIVANFIPEPSLAQGSDLTSKKKNKDEGGKDIMKKHRRQVLFSGIITAVGISLHNFPEGMAVFLGSMKGLRVGLNLAVAIALHNIPEGVAVALPVYFATQSKWQAFKLATLSGFAEPLGVIIVVGGVMAFLTLHEMLPLAFDYAGQKQAVKAVFVGMAFMSASLYFLEISLPAEMSL
ccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHcHHHHHHHHHHHHHHcHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHccccccc
cccHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccHHHccccHHHHHHHHHHHHHHHHHcccHHHHHHHHHcccHHHHHHHHHHHHHHccccccEEEEEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHcccHHccc
MVSQVLVALGLSLVGGLSTSIGALFVVLneapnlkvLGLLQGFAAGLMLSISFLDLAHNAINSIGFLKGNLWFFSGVIFFAIVanfipepslaqgsdltskkknkdeggkdiMKKHRRQVLFSGIITAVGislhnfpegMAVFLGSMKGLRVGLNLAVAIALhnipegvaVALPVYFATQSKWQAFKLATLSGFAEPLGVIIVVGGVMAFLTLHEMLPLAFDYAGQKQAVKAVFVGMAFMSASLYFLEISLPAEMSL
MVSQVLVALGLSLVGGLSTSIGALFVVLNEAPNLKVLGLLQGFAAGLMLSISFLDLAHNAINSIGFLKGNLWFFSGVIFFAIVANFIPEpslaqgsdltskkknkdeggkdimkkhrRQVLFSGIITAVGISLHNFPEGMAVFLGSMKGLRVGLNLAVAIALHNIPEGVAVALPVYFATQSKWQAFKLATLSGFAEPLGVIIVVGGVMAFLTLHEMLPLAFDYAGQKQAVKAVFVGMAFMSASLYFLEISLPAEMSL
MvsqvlvalglslvgglstsigALFVVLNEAPNLKVLGLLQGFAAGLMLSISFLDLAHNAINSIGFLKGNLWFFSGVIFFAIVANFIPEPSLAQGSDLTSKKKNKDEGGKDIMKKHRRQVLFSGIITAVGISLHNFPEGMAVFLGSMKGLRVGLNLAVAIALHNIPEGVAVALPVYFATQSKWQAFKLATLSGFAEPLGVIIVVGGVMAFLTLHEMLPLAFDYAGQKQAVKAVFVGMAFMSASLYFLEISLPAEMSL
****VLVALGLSLVGGLSTSIGALFVVLNEAPNLKVLGLLQGFAAGLMLSISFLDLAHNAINSIGFLKGNLWFFSGVIFFAIVANFIP****************************RRQVLFSGIITAVGISLHNFPEGMAVFLGSMKGLRVGLNLAVAIALHNIPEGVAVALPVYFATQSKWQAFKLATLSGFAEPLGVIIVVGGVMAFLTLHEMLPLAFDYAGQKQAVKAVFVGMAFMSASLYFLEISL******
**SQVLVALGLSLVGGLSTSIGALFVVLNEAPNLKVLGLLQGFAAGLMLSISFLDLAHNAINSIGFLKGNLWFFSGVIFFAIVANFIPEPSLAQG*************************LFSGIITAVGISLHNFPEGMAVFLGSMKGLRVGLNLAVAIALHNIPEGVAVALPVYFATQSKWQAFKLATLSGFAEPLGVIIVVGGVMAFLTLHEMLPLAFDYAGQKQAVKAVFVGMAFMSASLYFLEISLPAEMSL
MVSQVLVALGLSLVGGLSTSIGALFVVLNEAPNLKVLGLLQGFAAGLMLSISFLDLAHNAINSIGFLKGNLWFFSGVIFFAIVANFIPEPSLAQG**************KDIMKKHRRQVLFSGIITAVGISLHNFPEGMAVFLGSMKGLRVGLNLAVAIALHNIPEGVAVALPVYFATQSKWQAFKLATLSGFAEPLGVIIVVGGVMAFLTLHEMLPLAFDYAGQKQAVKAVFVGMAFMSASLYFLEISLPAEMSL
**SQVLVALGLSLVGGLSTSIGALFVVLNEAPNLKVLGLLQGFAAGLMLSISFLDLAHNAINSIGFLKGNLWFFSGVIFFAIVANFIPEPSLA**********************HRRQVLFSGIITAVGISLHNFPEGMAVFLGSMKGLRVGLNLAVAIALHNIPEGVAVALPVYFATQSKWQAFKLATLSGFAEPLGVIIVVGGVMAFLTLHEMLPLAFDYAGQKQAVKAVFVGMAFMSASLYFLEISLPA****
ooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiii
ooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiii
oooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooo
oooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSoooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooo
SSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MVSQVLVALGLSLVGGLSTSIGALFVVLNEAPNLKVLGLLQGFAAGLMLSISFLDLAHNAINSIGFLKGNLWFFSGVIFFAIVANFIPEPSLAQGSDLTSKKKNKDEGGKDIMKKHRRQVLFSGIITAVGISLHNFPEGMAVFLGSMKGLRVGLNLAVAIALHNIPEGVAVALPVYFATQSKWQAFKLATLSGFAEPLGVIIVVGGVMAFLTLHEMLPLAFDYAGQKQAVKAVFVGMAFMSASLYFLEISLPAEMSL
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query257 2.2.26 [Sep-21-2011]
Q940Q3276 Zinc transporter ZTP29 OS yes no 1.0 0.931 0.775 1e-118
Q54LY6372 Protein zntB OS=Dictyoste yes no 0.972 0.672 0.347 2e-42
B2FM90269 Zinc transporter ZupT OS= yes no 0.898 0.858 0.356 1e-38
Q8P8Z6272 Zinc transporter ZupT OS= yes no 0.926 0.875 0.355 2e-38
B4SPV6269 Zinc transporter ZupT OS= yes no 0.898 0.858 0.353 5e-38
Q8PKQ5272 Zinc transporter ZupT OS= yes no 0.914 0.863 0.344 7e-37
Q3AU90268 Zinc transporter ZupT OS= yes no 0.922 0.884 0.365 4e-36
A8ZVV7289 Zinc transporter ZupT OS= yes no 0.961 0.854 0.307 5e-36
B3QP89268 Zinc transporter ZupT OS= yes no 0.922 0.884 0.339 3e-35
Q8FTK0268 Zinc transporter ZupT OS= yes no 0.910 0.873 0.330 3e-35
>sp|Q940Q3|ZTP29_ARATH Zinc transporter ZTP29 OS=Arabidopsis thaliana GN=ZTP29 PE=2 SV=1 Back     alignment and function desciption
 Score =  425 bits (1093), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 214/276 (77%), Positives = 237/276 (85%), Gaps = 19/276 (6%)

Query: 1   MVSQVLVALGLSLVGGLSTSIGALFVVLNEAPNLKVLGLLQGFAAGLMLSISFLDLAHNA 60
           M SQ+LVALGLSLVGGLSTS+GALFVVL+E PN+K+LGLLQGFA+GLMLSISFLDLAHNA
Sbjct: 1   MDSQMLVALGLSLVGGLSTSLGALFVVLSETPNMKMLGLLQGFASGLMLSISFLDLAHNA 60

Query: 61  INSIGFLKGNLWFFSGVIFFAIVANFIPEPSLAQGSDLTSKKKNKDEGGKDIMKKHRRQV 120
           INSIGF K NLWFF GVIFFA +  FIPEP+L   +D   +KKN DEGGKD+MKKHR+QV
Sbjct: 61  INSIGFFKANLWFFGGVIFFACITKFIPEPTLGPSTDGKRRKKNGDEGGKDMMKKHRKQV 120

Query: 121 LFSGIITAVGISLHNFPEGMAVFLGSMKGLRVGLNLAVAIALHNIPEGVAVALPVYFATQ 180
           L+SG+ITA+GISLHNFPEGMAVFLGS+KG+RVG+NLA+AIALHNIPEGVAVALP+YFAT+
Sbjct: 121 LYSGLITAIGISLHNFPEGMAVFLGSIKGMRVGVNLALAIALHNIPEGVAVALPIYFATE 180

Query: 181 SKWQAFKLATLSGFAEPLGVIIV-------------------VGGVMAFLTLHEMLPLAF 221
           SKWQAFKLATLSG AEPLGVIIV                   VGG+MAFLTLHEMLPLAF
Sbjct: 181 SKWQAFKLATLSGLAEPLGVIIVAYLFPRSLSPEILEGLLGAVGGIMAFLTLHEMLPLAF 240

Query: 222 DYAGQKQAVKAVFVGMAFMSASLYFLEISLPAEMSL 257
           DYAGQKQAVKAVF GMA MSASLYFLE+SLP  MSL
Sbjct: 241 DYAGQKQAVKAVFFGMACMSASLYFLELSLPETMSL 276




Zinc transporter involved response to salt stress. May act through the regulation of zinc levels required to induce the unfolded protein response (UPR) pathway.
Arabidopsis thaliana (taxid: 3702)
>sp|Q54LY6|ZNTB_DICDI Protein zntB OS=Dictyostelium discoideum GN=zntB PE=2 SV=1 Back     alignment and function description
>sp|B2FM90|ZUPT_STRMK Zinc transporter ZupT OS=Stenotrophomonas maltophilia (strain K279a) GN=zupT PE=3 SV=1 Back     alignment and function description
>sp|Q8P8Z6|ZUPT_XANCP Zinc transporter ZupT OS=Xanthomonas campestris pv. campestris (strain ATCC 33913 / NCPPB 528 / LMG 568) GN=zupT PE=3 SV=1 Back     alignment and function description
>sp|B4SPV6|ZUPT_STRM5 Zinc transporter ZupT OS=Stenotrophomonas maltophilia (strain R551-3) GN=zupT PE=3 SV=1 Back     alignment and function description
>sp|Q8PKQ5|ZUPT_XANAC Zinc transporter ZupT OS=Xanthomonas axonopodis pv. citri (strain 306) GN=zupT PE=3 SV=1 Back     alignment and function description
>sp|Q3AU90|ZUPT_CHLCH Zinc transporter ZupT OS=Chlorobium chlorochromatii (strain CaD3) GN=zupT PE=3 SV=1 Back     alignment and function description
>sp|A8ZVV7|ZUPT_DESOH Zinc transporter ZupT OS=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) GN=zupT PE=3 SV=1 Back     alignment and function description
>sp|B3QP89|ZUPT_CHLP8 Zinc transporter ZupT OS=Chlorobaculum parvum (strain NCIB 8327) GN=zupT PE=3 SV=1 Back     alignment and function description
>sp|Q8FTK0|ZUPT_COREF Zinc transporter ZupT OS=Corynebacterium efficiens (strain DSM 44549 / YS-314 / AJ 12310 / JCM 11189 / NBRC 100395) GN=zupT PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query257
224057471276 ZIP transporter [Populus trichocarpa] gi 1.0 0.931 0.829 1e-123
255544818276 integral membrane protein, putative [Ric 1.0 0.931 0.826 1e-123
224072807276 ZIP transporter [Populus trichocarpa] gi 1.0 0.931 0.807 1e-121
449448736275 PREDICTED: zinc transporter ZTP29-like [ 0.996 0.930 0.822 1e-121
356550333276 PREDICTED: zinc transporter ZTP29-like [ 1.0 0.931 0.804 1e-120
356557603276 PREDICTED: zinc transporter ZTP29-like [ 1.0 0.931 0.800 1e-119
115444821276 Os02g0196000 [Oryza sativa Japonica Grou 1.0 0.931 0.804 1e-118
297835052276 metal transporter family protein [Arabid 1.0 0.931 0.782 1e-118
18402783276 ZIP metal ion transporter [Arabidopsis t 1.0 0.931 0.775 1e-117
388515275276 unknown [Lotus japonicus] 1.0 0.931 0.786 1e-116
>gi|224057471|ref|XP_002299235.1| ZIP transporter [Populus trichocarpa] gi|222846493|gb|EEE84040.1| ZIP transporter [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  448 bits (1152), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 229/276 (82%), Positives = 245/276 (88%), Gaps = 19/276 (6%)

Query: 1   MVSQVLVALGLSLVGGLSTSIGALFVVLNEAPNLKVLGLLQGFAAGLMLSISFLDLAHNA 60
           M SQV+VAL LSLVGGLSTSIGALFV+L +APNLK+LGLLQGFAAGLMLSISFLDLAHNA
Sbjct: 1   MDSQVMVALALSLVGGLSTSIGALFVILFQAPNLKMLGLLQGFAAGLMLSISFLDLAHNA 60

Query: 61  INSIGFLKGNLWFFSGVIFFAIVANFIPEPSLAQGSDLTSKKKNKDEGGKDIMKKHRRQV 120
           INSIGFLKGNLWFF GV+FF I+ANFIPEP+ A  SD+ SKKKN D+GGKDIMKKHRRQV
Sbjct: 61  INSIGFLKGNLWFFGGVVFFGIIANFIPEPTFAPSSDVKSKKKNGDQGGKDIMKKHRRQV 120

Query: 121 LFSGIITAVGISLHNFPEGMAVFLGSMKGLRVGLNLAVAIALHNIPEGVAVALPVYFATQ 180
           LFSGIITA+GISLHNFPEGMAVFLGS+KGLRVGLNLA+AIALHNIPEGVAVALP+YFATQ
Sbjct: 121 LFSGIITAIGISLHNFPEGMAVFLGSIKGLRVGLNLALAIALHNIPEGVAVALPIYFATQ 180

Query: 181 SKWQAFKLATLSGFAEPLGVIIV-------------------VGGVMAFLTLHEMLPLAF 221
           SKWQAFKLAT+SGFAEPLGV++V                   VGGVMAFLTLHEMLPLAF
Sbjct: 181 SKWQAFKLATVSGFAEPLGVVLVAYLFPSSLSPEILEGLLASVGGVMAFLTLHEMLPLAF 240

Query: 222 DYAGQKQAVKAVFVGMAFMSASLYFLEISLPAEMSL 257
           DYAGQKQAVKAVF GMAFMSASLYFLEISLP EMSL
Sbjct: 241 DYAGQKQAVKAVFFGMAFMSASLYFLEISLPEEMSL 276




Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255544818|ref|XP_002513470.1| integral membrane protein, putative [Ricinus communis] gi|223547378|gb|EEF48873.1| integral membrane protein, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|224072807|ref|XP_002303891.1| ZIP transporter [Populus trichocarpa] gi|222841323|gb|EEE78870.1| ZIP transporter [Populus trichocarpa] Back     alignment and taxonomy information
>gi|449448736|ref|XP_004142121.1| PREDICTED: zinc transporter ZTP29-like [Cucumis sativus] gi|449503610|ref|XP_004162088.1| PREDICTED: zinc transporter ZTP29-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|356550333|ref|XP_003543542.1| PREDICTED: zinc transporter ZTP29-like [Glycine max] Back     alignment and taxonomy information
>gi|356557603|ref|XP_003547105.1| PREDICTED: zinc transporter ZTP29-like [Glycine max] Back     alignment and taxonomy information
>gi|115444821|ref|NP_001046190.1| Os02g0196000 [Oryza sativa Japonica Group] gi|49388124|dbj|BAD25255.1| putative Zinc transporter zupT [Oryza sativa Japonica Group] gi|49388140|dbj|BAD25268.1| putative Zinc transporter zupT [Oryza sativa Japonica Group] gi|113535721|dbj|BAF08104.1| Os02g0196000 [Oryza sativa Japonica Group] gi|222622368|gb|EEE56500.1| hypothetical protein OsJ_05749 [Oryza sativa Japonica Group] Back     alignment and taxonomy information
>gi|297835052|ref|XP_002885408.1| metal transporter family protein [Arabidopsis lyrata subsp. lyrata] gi|297331248|gb|EFH61667.1| metal transporter family protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|18402783|ref|NP_566669.1| ZIP metal ion transporter [Arabidopsis thaliana] gi|75249505|sp|Q940Q3.1|ZTP29_ARATH RecName: Full=Zinc transporter ZTP29; AltName: Full=Zinc transporter 29 gi|15809844|gb|AAL06850.1| AT3g20870/MOE17_16 [Arabidopsis thaliana] gi|30102464|gb|AAP21150.1| At3g20870/MOE17_16 [Arabidopsis thaliana] gi|332642913|gb|AEE76434.1| ZIP metal ion transporter [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|388515275|gb|AFK45699.1| unknown [Lotus japonicus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query257
TAIR|locus:2091921276 ZTP29 [Arabidopsis thaliana (t 0.704 0.655 0.812 7.1e-77
DICTYBASE|DDB_G0286345372 zntB "zinc transporter" [Dicty 0.346 0.239 0.6 3e-48
UNIPROTKB|P0A8H3257 zupT "heavy metal divalent cat 0.758 0.758 0.360 6.8e-24
TIGR_CMR|CJE_0313291 CJE_0313 "zinc transporter Zup 0.603 0.532 0.382 4.8e-23
TIGR_CMR|GSU_0206300 GSU_0206 "ZIP zinc transporter 0.501 0.43 0.437 7e-22
WB|WBGene00019077321 F59A3.4 [Caenorhabditis elegan 0.466 0.373 0.348 6.3e-13
UNIPROTKB|E1BVD4342 SLC39A11 "Uncharacterized prot 0.377 0.283 0.373 8.1e-13
RGD|1311981335 Slc39a11 "solute carrier famil 0.361 0.277 0.368 3.8e-12
TIGR_CMR|CHY_2208243 CHY_2208 "ZIP zinc transporter 0.361 0.382 0.402 4.2e-12
MGI|MGI:1917056342 Slc39a11 "solute carrier famil 0.361 0.271 0.368 4.3e-12
TAIR|locus:2091921 ZTP29 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 774 (277.5 bits), Expect = 7.1e-77, P = 7.1e-77
 Identities = 147/181 (81%), Positives = 166/181 (91%)

Query:    23 ALFVVLNEAPNLKVLGLLQGFAAGLMLSISFLDLAHNAINSIGFLKGNLWFFSGVIFFAI 82
             ALFVVL+E PN+K+LGLLQGFA+GLMLSISFLDLAHNAINSIGF K NLWFF GVIFFA 
Sbjct:    23 ALFVVLSETPNMKMLGLLQGFASGLMLSISFLDLAHNAINSIGFFKANLWFFGGVIFFAC 82

Query:    83 VANFIPEPSLAQGSDLTSKKKNKDEGGKDIMKKHRRQVLFSGIITAVGISLHNFPEGMAV 142
             +  FIPEP+L   +D   +KKN DEGGKD+MKKHR+QVL+SG+ITA+GISLHNFPEGMAV
Sbjct:    83 ITKFIPEPTLGPSTDGKRRKKNGDEGGKDMMKKHRKQVLYSGLITAIGISLHNFPEGMAV 142

Query:   143 FLGSMKGLRVGLNLAVAIALHNIPEGVAVALPVYFATQSKWQAFKLATLSGFAEPLGVII 202
             FLGS+KG+RVG+NLA+AIALHNIPEGVAVALP+YFAT+SKWQAFKLATLSG AEPLGVII
Sbjct:   143 FLGSIKGMRVGVNLALAIALHNIPEGVAVALPIYFATESKWQAFKLATLSGLAEPLGVII 202

Query:   203 V 203
             V
Sbjct:   203 V 203


GO:0005886 "plasma membrane" evidence=ISM
GO:0016020 "membrane" evidence=IEA;ISS
GO:0030001 "metal ion transport" evidence=IEA;ISS
GO:0046873 "metal ion transmembrane transporter activity" evidence=IEA;ISS
GO:0055085 "transmembrane transport" evidence=IEA
DICTYBASE|DDB_G0286345 zntB "zinc transporter" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
UNIPROTKB|P0A8H3 zupT "heavy metal divalent cation transporter ZupT" [Escherichia coli K-12 (taxid:83333)] Back     alignment and assigned GO terms
TIGR_CMR|CJE_0313 CJE_0313 "zinc transporter ZupT" [Campylobacter jejuni RM1221 (taxid:195099)] Back     alignment and assigned GO terms
TIGR_CMR|GSU_0206 GSU_0206 "ZIP zinc transporter family protein" [Geobacter sulfurreducens PCA (taxid:243231)] Back     alignment and assigned GO terms
WB|WBGene00019077 F59A3.4 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
UNIPROTKB|E1BVD4 SLC39A11 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
RGD|1311981 Slc39a11 "solute carrier family 39 (metal ion transporter), member 11" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
TIGR_CMR|CHY_2208 CHY_2208 "ZIP zinc transporter family protein" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)] Back     alignment and assigned GO terms
MGI|MGI:1917056 Slc39a11 "solute carrier family 39 (metal ion transporter), member 11" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q57JS2ZUPT_SALCHNo assigned EC number0.35360.89100.8910yesno
B7LQB7ZUPT_ESCF3No assigned EC number0.35470.89880.8988yesno
P67470ZUPT_SALTYNo assigned EC number0.35360.89100.8910yesno
B3ECE6ZUPT_CHLL2No assigned EC number0.34610.86770.8383yesno
A8ZVV7ZUPT_DESOHNo assigned EC number0.30790.96100.8546yesno
B4SPV6ZUPT_STRM5No assigned EC number0.35310.89880.8587yesno
B5REE9ZUPT_SALG2No assigned EC number0.35360.89100.8910yesno
Q9K1H6ZUPT_NEIMBNo assigned EC number0.32220.90270.8624yesno
P0A8H4ZUPT_ECOL6No assigned EC number0.34330.89880.8988yesno
Q3B4G1ZUPT_PELLDNo assigned EC number0.35790.86380.8345yesno
B4TVS2ZUPT_SALSVNo assigned EC number0.35360.89100.8910yesno
B7UIV3ZUPT_ECO27No assigned EC number0.34330.89880.8988yesno
Q3YXK1ZUPT_SHISSNo assigned EC number0.34330.89880.8988yesno
Q5PMU9ZUPT_SALPANo assigned EC number0.34980.89100.8910yesno
B1ISB7ZUPT_ECOLCNo assigned EC number0.34330.89880.8988yesno
C3PFG5ZUPT_CORA7No assigned EC number0.33570.89880.8716yesno
Q8NQK0ZUPT_CORGLNo assigned EC number0.35160.87930.8593yesno
B5QZ27ZUPT_SALEPNo assigned EC number0.35360.89100.8910yesno
Q9JX23ZUPT_NEIMANo assigned EC number0.32220.90270.8624yesno
Q8PKQ5ZUPT_XANACNo assigned EC number0.34430.91430.8639yesno
A1KRK6ZUPT_NEIMFNo assigned EC number0.32220.90270.8624yesno
A4SE48ZUPT_PROVINo assigned EC number0.34240.86380.8345yesno
Q9PIN2ZUPT_CAMJENo assigned EC number0.33800.95330.8419yesno
B5FV58ZUPT_SALDCNo assigned EC number0.35360.89100.8910yesno
Q940Q3ZTP29_ARATHNo assigned EC number0.77531.00.9311yesno
Q3AU90ZUPT_CHLCHNo assigned EC number0.36530.92210.8843yesno
A9N5W7ZUPT_SALPBNo assigned EC number0.35360.89100.8910yesno
Q8FTK0ZUPT_COREFNo assigned EC number0.33080.91050.8731yesno
B4T660ZUPT_SALNSNo assigned EC number0.35360.89100.8910yesno
Q8ENQ1ZUPT_OCEIHNo assigned EC number0.33070.86380.8283yesno
Q8XMG8ZUPT_CLOPENo assigned EC number0.33920.92600.8350yesno
B1HYT6ZUPT_LYSSCNo assigned EC number0.35580.91050.8698yesno
B7ND33ZUPT_ECOLUNo assigned EC number0.34330.89880.8988yesno
B5F683ZUPT_SALA4No assigned EC number0.35360.89100.8910yesno
Q8P8Z6ZUPT_XANCPNo assigned EC number0.35500.92600.875yesno
B5BG02ZUPT_SALPKNo assigned EC number0.34980.89100.8910yesno
B2FM90ZUPT_STRMKNo assigned EC number0.35680.89880.8587yesno
A4WEI1ZUPT_ENT38No assigned EC number0.34330.89880.8988yesno
B7NJQ3ZUPT_ECO7INo assigned EC number0.34710.89880.8988yesno
B4TI40ZUPT_SALHSNo assigned EC number0.35470.89880.8988yesno
B6I411ZUPT_ECOSENo assigned EC number0.34330.89880.8988yesno
C0PYW1ZUPT_SALPCNo assigned EC number0.35360.89100.8910yesno
Q8DRY7ZUPT_STRMUNo assigned EC number0.32470.90660.8825yesno
B1LF36ZUPT_ECOSMNo assigned EC number0.34330.89880.8988yesno
B3QP89ZUPT_CHLP8No assigned EC number0.33940.92210.8843yesno

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Your Input:
estExt_fgenesh4_pm.C_LG_I0113
ZIP transporter (276 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query257
PRK04201265 PRK04201, PRK04201, zinc transporter ZupT; Provisi 3e-62
COG0428266 COG0428, COG0428, Predicted divalent heavy-metal c 2e-33
pfam02535314 pfam02535, Zip, ZIP Zinc transporter 1e-13
>gnl|CDD|235253 PRK04201, PRK04201, zinc transporter ZupT; Provisional Back     alignment and domain information
 Score =  195 bits (499), Expect = 3e-62
 Identities = 94/273 (34%), Positives = 147/273 (53%), Gaps = 36/273 (13%)

Query: 3   SQVLVALGLSLVGGLSTSIGALFVVLNEAPNLKVLGLLQGFAAGLMLSISFLDLAHNAIN 62
           S V VAL L+L+ GL+T IG+L     + PN + L    GFAAG+ML +SF+++   A+ 
Sbjct: 2   SNVSVALLLTLLAGLATGIGSLIAFFGKKPNNRFLSFSLGFAAGVMLYVSFMEILPKALA 61

Query: 63  SI--------GFLKGNLWFFSGVIFFAIVANFIPEPSLAQGSDLTSKKKNKDEGGKDIMK 114
           ++        G   G   FF G++   ++   +P           +  +   +   +  +
Sbjct: 62  ALTEAYGEGMGPWLGYGAFFGGILGIFLIDRLVPH---------ENPHELMQKEEMEFQQ 112

Query: 115 KHRRQVLFSGIITAVGISLHNFPEGMAVFLGSMKGLRVGLNLAVAIALHNIPEGVAVALP 174
              + +  +GI+TA+ IS+HNFPEG+A F+ ++    +G  +A+AIA+HNIPEG+AVA+P
Sbjct: 113 PLPKSLKRTGILTALAISIHNFPEGIATFVAALSNPELGFPIALAIAIHNIPEGIAVAVP 172

Query: 175 VYFATQSKWQAFKLATLSGFAEPLGVII-------------------VVGGVMAFLTLHE 215
           VY+AT SK +AF  + LSG AEPLG ++                    V G+M F++L E
Sbjct: 173 VYYATGSKKKAFLYSFLSGLAEPLGAVLGYLLLGPFISPVVMGAIFAAVAGIMVFISLDE 232

Query: 216 MLPLAFDYAGQKQAVKAVFVGMAFMSASLYFLE 248
           +LP A +Y         +  GMA M+ SL  L+
Sbjct: 233 LLPAAKEYGPHHLPSYGLIAGMAVMALSLVLLQ 265


Length = 265

>gnl|CDD|223505 COG0428, COG0428, Predicted divalent heavy-metal cations transporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>gnl|CDD|217089 pfam02535, Zip, ZIP Zinc transporter Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 257
PRK04201265 zinc transporter ZupT; Provisional 100.0
COG0428266 Predicted divalent heavy-metal cations transporter 100.0
PF02535317 Zip: ZIP Zinc transporter; InterPro: IPR003689 The 100.0
PLN02159337 Fe(2+) transport protein 100.0
TIGR00820324 zip ZIP zinc/iron transport family. transport has 100.0
KOG1558327 consensus Fe2+/Zn2+ regulated transporter [Inorgan 99.98
KOG2694361 consensus Putative zinc transporter [Inorganic ion 99.94
KOG2693453 consensus Putative zinc transporter [Inorganic ion 99.92
KOG2474406 consensus Zinc transporter and related ZIP domain- 99.54
KOG3907303 consensus ZIP-like zinc transporter proteins [Intr 99.51
PRK04201265 zinc transporter ZupT; Provisional 98.57
PF02535317 Zip: ZIP Zinc transporter; InterPro: IPR003689 The 98.35
COG0428266 Predicted divalent heavy-metal cations transporter 98.3
PLN02159337 Fe(2+) transport protein 97.67
TIGR00820324 zip ZIP zinc/iron transport family. transport has 97.57
KOG1558327 consensus Fe2+/Zn2+ regulated transporter [Inorgan 97.29
KOG2693453 consensus Putative zinc transporter [Inorganic ion 95.93
KOG2474406 consensus Zinc transporter and related ZIP domain- 87.24
>PRK04201 zinc transporter ZupT; Provisional Back     alignment and domain information
Probab=100.00  E-value=1.8e-44  Score=316.49  Aligned_cols=237  Identities=40%  Similarity=0.675  Sum_probs=203.0

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHHHHhhHHHHHh--------hhhHHHHHHH
Q 025128            2 VSQVLVALGLSLVGGLSTSIGALFVVLNEAPNLKVLGLLQGFAAGLMLSISFLDLAHNAINS--------IGFLKGNLWF   73 (257)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~lG~~~~~~~~~~~~~~l~~l~afaaGvml~~~~~~llpea~~~--------~~~~~~~~~~   73 (257)
                      +++.++++++++++++++.+|++++++.+++++|+++++++||+|+|+++++.|++||++|.        .+++....++
T Consensus         1 ~~~~~~a~~~~~l~~~~t~lGal~~~~~~~~~~~~l~~~lafAaGvml~~~~~~LiPea~~~~~~~~~~~~~~~~~~~~~   80 (265)
T PRK04201          1 MSNVSVALLLTLLAGLATGIGSLIAFFGKKPNNRFLSFSLGFAAGVMLYVSFMEILPKALAALTEAYGEGMGPWLGYGAF   80 (265)
T ss_pred             CchHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccHHHHHHHH
Confidence            35788899999999999999999999888899999999999999999999999999999984        2355677899


Q ss_pred             HHHHHHHHHHHHHcCCCCccCCCcccccccCCCCCCcchhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHhhccchhhH
Q 025128           74 FSGVIFFAIVANFIPEPSLAQGSDLTSKKKNKDEGGKDIMKKHRRQVLFSGIITAVGISLHNFPEGMAVFLGSMKGLRVG  153 (257)
Q Consensus        74 ~~G~~~~~~le~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lal~lHs~~eGlaiG~a~~~~~~~g  153 (257)
                      ++|+++++.+|++.++.|.+++++.   ++.+++      .+.+++..+.++++.+|+++||+|||+++|+++..+.+.|
T Consensus        81 ~~G~ll~~~ld~~~~~~~~~~~~~~---~~~~~~------~~~~~~~~~~~~~~~~a~~lH~~~eGlalg~~~~~~~~~g  151 (265)
T PRK04201         81 FGGILGIFLIDRLVPHENPHELMQK---EEMEFQ------QPLPKSLKRTGILTALAISIHNFPEGIATFVAALSNPELG  151 (265)
T ss_pred             HHHHHHHHHHHHhccccCccccccc---cccccc------ccchHHHHHHHHHHHHHHHHHhcchhhhhhhhhhcchhhH
Confidence            9999999999999985443221100   000000      0112233456888999999999999999999998889999


Q ss_pred             HHHHHHHHHhhhHHHHHHHHHHHhhcCCHHHHHHHHHHHhhHHHHHHHHH-------------------HHHHHHHHHHH
Q 025128          154 LNLAVAIALHNIPEGVAVALPVYFATQSKWQAFKLATLSGFAEPLGVIIV-------------------VGGVMAFLTLH  214 (257)
Q Consensus       154 ~~l~~ai~lH~ipeg~a~~~~l~~~g~s~~~~~~~~~~~~l~~plG~~ig-------------------aaG~~lyv~~~  214 (257)
                      +.+++||++||+|||++++.++++++.+|+|++.+++++++++|+|+++|                   ++|+|+|++++
T Consensus       152 ~~~~~aI~~H~iPeg~a~~~~l~~~~~s~~~~~~~~~~~~l~~p~G~~~g~~~~~~~~~~~~~~~~l~~aaG~~lyv~~~  231 (265)
T PRK04201        152 FPIALAIAIHNIPEGIAVAVPVYYATGSKKKAFLYSFLSGLAEPLGAVLGYLLLGPFISPVVMGAIFAAVAGIMVFISLD  231 (265)
T ss_pred             HHHHHHHHHhcCcHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHHHHHHHccccchhHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999987                   99999999999


Q ss_pred             hhhHhhhhccChhHHHHHHHHHHHHHHHHHHHH
Q 025128          215 EMLPLAFDYAGQKQAVKAVFVGMAFMSASLYFL  247 (257)
Q Consensus       215 ellpe~~~~~~~~~~~~~~~~G~~l~~~~l~~~  247 (257)
                      |++||++++++++..+.++++|+.+|++.++.+
T Consensus       232 el~pea~~~~~~~~~~~~~~~G~~~m~~~~~~~  264 (265)
T PRK04201        232 ELLPAAKEYGPHHLPSYGLIAGMAVMALSLVLL  264 (265)
T ss_pred             HHHHHHHhcCcchHHHHHHHHHHHHHHHHHHHh
Confidence            999999998777778889999999999887654



>COG0428 Predicted divalent heavy-metal cations transporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>PF02535 Zip: ZIP Zinc transporter; InterPro: IPR003689 These ZIP zinc transporter proteins define a family of metal ion transporters that are found in plants, protozoa, fungi, invertebrates, and vertebrates, making it now possible to address questions of metal ion accumulation and homeostasis in diverse organisms [] Back     alignment and domain information
>PLN02159 Fe(2+) transport protein Back     alignment and domain information
>TIGR00820 zip ZIP zinc/iron transport family Back     alignment and domain information
>KOG1558 consensus Fe2+/Zn2+ regulated transporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>KOG2694 consensus Putative zinc transporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>KOG2693 consensus Putative zinc transporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>KOG2474 consensus Zinc transporter and related ZIP domain-containing proteins [Inorganic ion transport and metabolism] Back     alignment and domain information
>KOG3907 consensus ZIP-like zinc transporter proteins [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>PRK04201 zinc transporter ZupT; Provisional Back     alignment and domain information
>PF02535 Zip: ZIP Zinc transporter; InterPro: IPR003689 These ZIP zinc transporter proteins define a family of metal ion transporters that are found in plants, protozoa, fungi, invertebrates, and vertebrates, making it now possible to address questions of metal ion accumulation and homeostasis in diverse organisms [] Back     alignment and domain information
>COG0428 Predicted divalent heavy-metal cations transporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>PLN02159 Fe(2+) transport protein Back     alignment and domain information
>TIGR00820 zip ZIP zinc/iron transport family Back     alignment and domain information
>KOG1558 consensus Fe2+/Zn2+ regulated transporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>KOG2693 consensus Putative zinc transporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>KOG2474 consensus Zinc transporter and related ZIP domain-containing proteins [Inorganic ion transport and metabolism] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00