Citrus Sinensis ID: 025198


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250------
MAATTTIKPLLPLSLSPNKSCSYSIPSSSSFISCNPISDSTATFSLLHSNRPRGQISVSVAFNPQGNFDIPMFEDEGNSSKLEPPMPPTEGRFDVVLENDAIRSLDLSPFHSATGITSPTLAEPKEFLERTIGFTINYTREDPRDPRELSEFPDIRLWFVRLDAAYPWIPVLLDWRAGELARYAAMLVPHQMSMKMGIVFNPEALELFIMNKVFVVYTWFKQHNVQKPRLKTSDMARMLGFGIEDRLFDLVDRESS
cccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEEccccccccccccccccccccccccccccccEEEEEcHHHHHHcccccHHHHHccccccccccHHHHccEEEEEEEEEccccccccccccccccEEEEEEEccccccEEEEEEcccccHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHcccccHHHHHHHHHccc
cccccccccccccccccccccccccccccccccccccccccccccHcccccccccEEEEEEEcccccccccccccccccccccccccccccEEEEEEcHHHHHHccccHHHHHHHcccHHHHHcHHHHHHccEEEEcccccccccccHHHcccccEEEEEEEcccccccHHEEcccccHHHHHHHHHcccccccccccEEcHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHcccccHHHHHHHHcccc
maatttikpllplslspnkscsysipssssfiscnpisdstatFSLLhsnrprgqisvsvafnpqgnfdipmfedegnsskleppmpptegrfdvvlendairsldlspfhsatgitsptlaepkeFLERTIGFTinytredprdprelsefpdiRLWFVRLdaaypwipvLLDWRAGELARYAAMLVPHQMSMKMGIVFNPEALELFIMNKVFVVYTWFkqhnvqkprlktSDMARMLGFGIEDRLFDLVDRESS
maatttikpllplslspnkSCSYSIPSSSSFISCNPISDSTATFSLLHSNRPRGQISVSVAFNPQGNFDIPMFEDEGNSSKLEPPMPPTEGRFDVVLENDAIRSLDLSPFHSatgitsptlaepkefLERTIGFtinytredprdprelsEFPDIRLWFVRLDAAYPWIPVLLDWRAGELARYAAMLVPHQMSMKMGIVFNPEALELFIMNKVFVVYTWFKQhnvqkprlktSDMARMLGFGIedrlfdlvdress
MAATTTIKpllplslspnkscsysipssssfiscnpisdsTATFSLLHSNRPRGQISVSVAFNPQGNFDIPMFEDEGNSSKLEPPMPPTEGRFDVVLENDAIRSLDLSPFHSATGITSPTLAEPKEFLERTIGFTINYTREDPRDPRELSEFPDIRLWFVRLDAAYPWIPVLLDWRAGELARYAAMLVPHQMSMKMGIVFNPEALELFIMNKVFVVYTWFKQHNVQKPRLKTSDMARMLGFGIEDRLFDLVDRESS
*********************************************************************************************DVVLENDAIRSLDLSPFHSATGITSPTLAEPKEFLERTIGFTINYTR*********SEFPDIRLWFVRLDAAYPWIPVLLDWRAGELARYAAMLVPHQMSMKMGIVFNPEALELFIMNKVFVVYTWFKQHNVQKPRLKTSDMARMLGFGIEDRLFDLV*****
********PLLPL*********************NPIS****************QISVSVAFNPQGNFDIPM******************GRFDVVLENDAIRSLDLSPFHSATGITSPTLAEPKEFLERTIGFTINYTREDPRDPRELSEFPDIRLWFVRLDAAYPWIPVLLDWRAGELARYAAMLVPHQMSMKMGIVFNPEALELFIMNKVFVVYTWFK*************MARMLGFGIEDRLFDLVDR***
MAATTTIKPLLPLSLSPNKSCSYSIPSSSSFISCNPISDSTATFSLLHSNRPRGQISVSVAFNPQGNFDIPMFEDEGNSSKLEPPMPPTEGRFDVVLENDAIRSLDLSPFHSATGITSPTLAEPKEFLERTIGFTINYTREDPRDPRELSEFPDIRLWFVRLDAAYPWIPVLLDWRAGELARYAAMLVPHQMSMKMGIVFNPEALELFIMNKVFVVYTWFKQHNVQKPRLKTSDMARMLGFGIEDRLFDLVDRESS
***TTTIKPLLPLSLSPNKSCSYSIPSSSSFISCNPISDSTATFSLLHSNRPRGQISVSVAFNPQGNFDIPMFEDEGNSSKLEPPMPPTEGRFDVVLENDAIRSLDLSPFHSATGITSPTLAEPKEFLERTIGFTINYTREDPRDPRELSEFPDIRLWFVRLDAAYPWIPVLLDWRAGELARYAAMLVPHQMSMKMGIVFNPEALELFIMNKVFVVYTWFKQHNVQKPRLKTSDMARMLGFGIEDRLFDLVDR***
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MAATTTIKPLLPLSLSPNKSCSYSIPSSSSFISCNPISDSTATFSLLHSNRPRGQISVSVAFNPQGNFDIPMFEDEGNSSKLEPPMPPTEGRFDVVLENDAIRSLDLSPFHSATGITSPTLAEPKEFLERTIGFTINYTREDPRDPRELSEFPDIRLWFVRLDAAYPWIPVLLDWRAGELARYAAMLVPHQMSMKMGIVFNPEALELFIMNKVFVVYTWFKQHNVQKPRLKTSDMARMLGFGIEDRLFDLVDRESS
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query256
255583504254 conserved hypothetical protein [Ricinus 0.964 0.972 0.709 1e-101
225463047254 PREDICTED: uncharacterized protein LOC10 0.906 0.913 0.741 1e-100
147822285256 hypothetical protein VITISV_018847 [Viti 0.875 0.875 0.741 4e-97
296084559214 unnamed protein product [Vitis vinifera] 0.808 0.967 0.777 5e-94
388515761243 unknown [Medicago truncatula] 0.824 0.868 0.726 3e-89
357478421245 hypothetical protein MTR_4g116350 [Medic 0.824 0.861 0.726 4e-89
351721889246 uncharacterized protein LOC100526934 [Gl 0.863 0.898 0.675 2e-86
18407481246 chlororespiratory reduction 6 [Arabidops 0.769 0.800 0.755 4e-86
449457943259 PREDICTED: uncharacterized protein LOC10 0.968 0.957 0.665 3e-85
388518735252 unknown [Lotus japonicus] 0.785 0.797 0.722 5e-85
>gi|255583504|ref|XP_002532510.1| conserved hypothetical protein [Ricinus communis] gi|223527785|gb|EEF29886.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
 Score =  372 bits (954), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 178/251 (70%), Positives = 210/251 (83%), Gaps = 4/251 (1%)

Query: 3   ATTTIKPLLPLSLSPNKSCSYSIPSSSSFISCNPISDSTATFSLLHSNRPRGQISVSVAF 62
           ATT IKPL+P  L P +     +PS+S ++S  PI+DS     +    R +GQ++VSV+F
Sbjct: 2   ATTIIKPLIPHFLLPKQI----VPSTSPWLSSKPITDSLPNLPVSCLVRQQGQVAVSVSF 57

Query: 63  NPQGNFDIPMFEDEGNSSKLEPPMPPTEGRFDVVLENDAIRSLDLSPFHSATGITSPTLA 122
           NP GNFD+ +FED+ +S  +EP MPPTE RFDV ++N AI+SLDLSPF++ATGIT+P   
Sbjct: 58  NPSGNFDLSLFEDDEDSPNVEPSMPPTEDRFDVAIDNVAIQSLDLSPFNNATGITAPLSV 117

Query: 123 EPKEFLERTIGFTINYTREDPRDPRELSEFPDIRLWFVRLDAAYPWIPVLLDWRAGELAR 182
           EPKEFLERTIGFTINYTREDPRDPRELSEFPDIRLWFVRLDA YPW+PVLLDWRAGELAR
Sbjct: 118 EPKEFLERTIGFTINYTREDPRDPRELSEFPDIRLWFVRLDATYPWLPVLLDWRAGELAR 177

Query: 183 YAAMLVPHQMSMKMGIVFNPEALELFIMNKVFVVYTWFKQHNVQKPRLKTSDMARMLGFG 242
           YAAMLVPHQM+MKMG+VFNPEALELF+M KVF+VY+W KQHN+ KPRLKTSDMARMLGFG
Sbjct: 178 YAAMLVPHQMNMKMGVVFNPEALELFVMKKVFIVYSWLKQHNIPKPRLKTSDMARMLGFG 237

Query: 243 IEDRLFDLVDR 253
           I D LFDL+D+
Sbjct: 238 IGDELFDLIDQ 248




Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225463047|ref|XP_002268060.1| PREDICTED: uncharacterized protein LOC100255118 [Vitis vinifera] gi|147826988|emb|CAN77780.1| hypothetical protein VITISV_004173 [Vitis vinifera] Back     alignment and taxonomy information
>gi|147822285|emb|CAN72910.1| hypothetical protein VITISV_018847 [Vitis vinifera] Back     alignment and taxonomy information
>gi|296084559|emb|CBI25580.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|388515761|gb|AFK45942.1| unknown [Medicago truncatula] Back     alignment and taxonomy information
>gi|357478421|ref|XP_003609496.1| hypothetical protein MTR_4g116350 [Medicago truncatula] gi|355510551|gb|AES91693.1| hypothetical protein MTR_4g116350 [Medicago truncatula] Back     alignment and taxonomy information
>gi|351721889|ref|NP_001236201.1| uncharacterized protein LOC100526934 [Glycine max] gi|255631181|gb|ACU15956.1| unknown [Glycine max] Back     alignment and taxonomy information
>gi|18407481|ref|NP_566113.1| chlororespiratory reduction 6 [Arabidopsis thaliana] gi|11692910|gb|AAG40058.1|AF324707_1 At2g47910 [Arabidopsis thaliana] gi|12642888|gb|AAK00386.1|AF339704_1 unknown protein [Arabidopsis thaliana] gi|3738303|gb|AAC63645.1| expressed protein [Arabidopsis thaliana] gi|15010782|gb|AAK74050.1| T9J23.7/T9J23.7 [Arabidopsis thaliana] gi|15809758|gb|AAL06807.1| At2g47910/T9J23.7 [Arabidopsis thaliana] gi|20197562|gb|AAM15131.1| expressed protein [Arabidopsis thaliana] gi|21536566|gb|AAM60898.1| unknown [Arabidopsis thaliana] gi|330255816|gb|AEC10910.1| chlororespiratory reduction 6 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|449457943|ref|XP_004146707.1| PREDICTED: uncharacterized protein LOC101216098 [Cucumis sativus] gi|449505400|ref|XP_004162457.1| PREDICTED: uncharacterized protein LOC101227212 [Cucumis sativus] Back     alignment and taxonomy information
>gi|388518735|gb|AFK47429.1| unknown [Lotus japonicus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query256
TAIR|locus:2043338246 CRR6 "AT2G47910" [Arabidopsis 0.769 0.800 0.755 1.3e-82
TAIR|locus:2043338 CRR6 "AT2G47910" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 828 (296.5 bits), Expect = 1.3e-82, P = 1.3e-82
 Identities = 151/200 (75%), Positives = 175/200 (87%)

Query:    56 ISVSVAFNPQGNFDIPMFEDEGNSSKLEPPMPPTEGRFDVVLENDAIRSLDLSPFHSATG 115
             ++VSVAFNP GNFDI  FE++ +S K+EPPMPPT GR++VV++ND+I  LDLSPF  A G
Sbjct:    44 VAVSVAFNPSGNFDISAFENDQDSDKVEPPMPPTTGRYEVVIDNDSIGRLDLSPFQRAIG 103

Query:   116 ITSPT---LAEPKEFLERTIGFTINYTREDPRDPRELSEFPDIRLWFVRLDAAYPWIPVL 172
             ITSP    +AEPK +L+RTIGFTINY REDP DPRELSE+PD+RLWFVRLDA YPW+P+L
Sbjct:   104 ITSPDDFGVAEPKRYLDRTIGFTINYKREDPGDPRELSEYPDVRLWFVRLDAMYPWLPLL 163

Query:   173 LDWRAGELARYAAMLVPHQMSMKMGIVFNPEALELFIMNKVFVVYTWFKQHNVQKPRLKT 232
             LDWRAGELARYAAMLVPHQMS++MG+VFNPEALELF+MNKVFVVY W K+H V KPRLKT
Sbjct:   164 LDWRAGELARYAAMLVPHQMSLRMGVVFNPEALELFVMNKVFVVYPWLKRHGVPKPRLKT 223

Query:   233 SDMARMLGFGIEDRLFDLVD 252
             SDMARMLGFGI D LFDL+D
Sbjct:   224 SDMARMLGFGIGDELFDLID 243


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.322   0.137   0.415    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      256       224   0.00099  112 3  11 22  0.37    33
                                                     32  0.40    36


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  584 (62 KB)
  Total size of DFA:  173 KB (2101 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  19.01u 0.08s 19.09t   Elapsed:  00:00:01
  Total cpu time:  19.01u 0.08s 19.09t   Elapsed:  00:00:01
  Start:  Mon May 20 20:22:03 2013   End:  Mon May 20 20:22:04 2013


GO:0003674 "molecular_function" evidence=ND
GO:0005634 "nucleus" evidence=ISM
GO:0009507 "chloroplast" evidence=ISM;IDA
GO:0009535 "chloroplast thylakoid membrane" evidence=IDA
GO:0010275 "NAD(P)H dehydrogenase complex assembly" evidence=IMP
GO:0009570 "chloroplast stroma" evidence=IDA
GO:0009073 "aromatic amino acid family biosynthetic process" evidence=RCA
GO:0016226 "iron-sulfur cluster assembly" evidence=RCA

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Your Input:
GSVIVG00005655001
SubName- Full=Putative uncharacterized protein (Chromosome undetermined scaffold_155, whole genome shotgun sequence); (254 aa)
(Vitis vinifera)
Predicted Functional Partners:
GSVIVG00023910001
SubName- Full=Chromosome chr6 scaffold_3, whole genome shotgun sequence; (216 aa)
     0.836
ndhM
SubName- Full=Chromosome chr18 scaffold_1, whole genome shotgun sequence;; NDH-1 shuttles elect [...] (208 aa)
     0.816
GSVIVG00017440001
SubName- Full=Chromosome chr6 scaffold_15, whole genome shotgun sequence; (113 aa)
     0.724
GSVIVG00002190001
SubName- Full=Chromosome undetermined scaffold_127, whole genome shotgun sequence; (437 aa)
      0.611
GSVIVG00022834001
SubName- Full=Chromosome chr14 scaffold_27, whole genome shotgun sequence; (353 aa)
      0.610
GSVIVG00023908001
SubName- Full=Chromosome chr6 scaffold_3, whole genome shotgun sequence; (126 aa)
      0.608
GSVIVG00037644001
SubName- Full=Chromosome chr9 scaffold_90, whole genome shotgun sequence; (395 aa)
     0.605
GSVIVG00023602001
SubName- Full=Chromosome chr7 scaffold_31, whole genome shotgun sequence; (180 aa)
      0.599
GSVIVG00034806001
SubName- Full=Chromosome chr4 scaffold_73, whole genome shotgun sequence; (158 aa)
     0.593
GSVIVG00006469001
SubName- Full=Chromosome undetermined scaffold_171, whole genome shotgun sequence; (155 aa)
      0.585

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query256
pfam08847150 pfam08847, DUF1817, Domain of unknown function (DU 1e-75
COG5474159 COG5474, COG5474, Uncharacterized conserved protei 7e-46
>gnl|CDD|149793 pfam08847, DUF1817, Domain of unknown function (DUF1817) Back     alignment and domain information
 Score =  225 bits (576), Expect = 1e-75
 Identities = 81/155 (52%), Positives = 103/155 (66%), Gaps = 6/155 (3%)

Query: 96  VLENDAIRSLDLSPFHSATGITSPTLAEPKEFLERTIGFTINYTREDPRDPRELSEFPDI 155
            ++ DAIR LDLSP      +    L      LE+ +  TI++ RE P DPRELSE P++
Sbjct: 1   TIDADAIRRLDLSPLQEWIELPLGDLLA----LEQQLELTIDWPRE-PDDPRELSECPEV 55

Query: 156 RLWFVRLDAAYPWIPVLLDWRAGELARYAAMLVPHQMSMKMGIVFNPEALELFIMNKVFV 215
           RLWF+R DA YPW+P+LLDW AGELARY AMLVPHQ S   GI FNPEALELF+M+K+FV
Sbjct: 56  RLWFLRADARYPWLPLLLDWSAGELARYVAMLVPHQFSRTEGIRFNPEALELFVMHKLFV 115

Query: 216 VYTWFKQHNVQKPRLKTSDMARMLGFGIEDRLFDL 250
           +  W KQ  +     +   MA MLG+ ++D  F+L
Sbjct: 116 LDDWLKQQGLSSRG-RLKQMAAMLGYELDDEFFEL 149


Members of this family are functionally uncharacterized. Length = 150

>gnl|CDD|227761 COG5474, COG5474, Uncharacterized conserved protein [Function unknown] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 256
PF08847150 DUF1817: Domain of unknown function (DUF1817); Int 100.0
COG5474159 Uncharacterized conserved protein [Function unknow 100.0
>PF08847 DUF1817: Domain of unknown function (DUF1817); InterPro: IPR014946 Members of this entry are functionally uncharacterised Back     alignment and domain information
Probab=100.00  E-value=1e-81  Score=530.11  Aligned_cols=150  Identities=57%  Similarity=1.069  Sum_probs=144.4

Q ss_pred             EeChhhhhhcCCchhhhhhccCCCCCCCchhhhcceeEEEEeecCCCCCCCccccCCCchhhhHhhhcCCCCceeEEEec
Q 025198           96 VLENDAIRSLDLSPFHSATGITSPTLAEPKEFLERTIGFTINYTREDPRDPRELSEFPDIRLWFVRLDAAYPWIPVLLDW  175 (256)
Q Consensus        96 ~I~~d~I~~LDLSPv~~~ie~~~~L~~~~~~~Leq~L~F~i~ypr~dp~DPRELSEIPEvRLWFvRLDA~YPWLP~lLDw  175 (256)
                      +|++|+|++|||||++++++    +..+.+..+||+|+|+|+|||+ ++||||||||||||||||||||+|||||++|||
T Consensus         1 ~i~~d~I~~LDLSP~~~~~~----~~~~~~~~~e~~l~f~i~ypr~-~~DPRELSEiPEvRLWFiRlDa~yPWlP~lLdw   75 (150)
T PF08847_consen    1 TINADAIRRLDLSPLQTWIE----LPEEALLSLEQQLGFEIDYPRE-PDDPRELSEIPEVRLWFIRLDARYPWLPFLLDW   75 (150)
T ss_pred             CCChHHHHHcCCcHHHHHHh----cchhhHHhhcceeeEEEeccCC-CCCchhhhcccHHHHHHHHhccCCCcchheecc
Confidence            48999999999999999998    4455677789999999999995 999999999999999999999999999999999


Q ss_pred             CCCchhhhhhhhcccccccccceeeChhHHHHHHHhhHHhHHHHHhhcCCCCccchHHHHHHHhCCcccchhhhhh
Q 025198          176 RAGELARYAAMLVPHQMSMKMGIVFNPEALELFIMNKVFVVYTWFKQHNVQKPRLKTSDMARMLGFGIEDRLFDLV  251 (256)
Q Consensus       176 kaGELaRyvAMLVPHQFs~~eGI~FNPEALEifvm~KvFvL~~WLk~~~i~~~r~~l~~MAqmLGyeLdd~ff~li  251 (256)
                      |+|||+||||||||||||++|||||||||||||||||||+|++|+|++|+++ ++||++||||||||||++||++|
T Consensus        76 ~~GeL~Ry~AMLVPHqfs~~eGi~fnPEALEifvm~klf~L~~wl~~~~i~~-~~~l~~MA~~lGyeld~~f~~li  150 (150)
T PF08847_consen   76 RSGELARYVAMLVPHQFSRKEGIQFNPEALEIFVMHKLFVLDDWLKQQGIPS-RSRLKSMAQMLGYELDDEFFDLI  150 (150)
T ss_pred             ccCcHHHHHHHhCccccccccCceeCHHHHHHHHHHHHHHHHHHHHHcCCCc-hhhHHHHHHHhCCCcCHHHHhcC
Confidence            9999999999999999999999999999999999999999999999999999 79999999999999999999986



>COG5474 Uncharacterized conserved protein [Function unknown] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00