Citrus Sinensis ID: 025243


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-----
MRQPTKVKSCLAVVFTVCSLVAMKLFVKNHDYFFVASEAIHAAGIMVLIYKLTTKNTCSGLSLKTQELTAMFLALRLVCSIIMEADIHTVLDFATLASTAWVIYMIRFKLKSTYIKELDNFPIYYIAVPSAILAFIVHPSNRLINLSGILWAFCVYVESVSVLPQLRLMQNAKMIEPFTSHYVFALGVARFLSFAHWILQLIETRGRYLFLLGHGYLWFPVAFLAEMIQTFILADFCYYYIKSLKEGQLLMRMPI
ccccccHHHHHHHHHHHHHHHHHHHHEEccHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEcccccccccccccHHHHHHHHHHHHHEEccccccccccccHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccc
ccccHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccEEEEEEEHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEccc
mrqptkvksCLAVVFTVCSLVAMKLFVKNHDYFFVASEAIHAAGIMVLIYKLttkntcsglslkTQELTAMFLALRLVCSIIMEADIHTVLDFATLASTAWVIYMIRFKLKSTYIkeldnfpiyyiaVPSAILAFIVHPSNRLINLSGILWAFCVYVESVSVLPQLRLMQNAKMIEPFTSHYVFALGVARFLSFAHWILQLIETRGRYLFLLGHGYLWFPVAFLAEMIQTFILADFCYYYIKSLKEgqllmrmpi
mrqptkvksclAVVFTVCSLVAMKLFVKNHDYFFVASEAIHAAGIMVLIYKLTTKNTCSGLSLKTQELTAMFLALRLVCSIIMEADIHTVLDFATLASTAWVIYMIRFKLKSTYIKELDNFPIYYIAVPSAILAFIVHPSNRLINLSGILWAFCVYVESVSVLPQLRLMQNAKMIEPFTSHYVFALGVARFLSFAHWILQLIETRGRYLFLLGHGYLWFPVAFLAEMIQTFILADFCYYYIKSLkegqllmrmpi
MRQPTKVKSCLAVVFTVCSLVAMKLFVKNHDYFFVASEAIHAAGIMVLIYKLTTKNTCSGLSLKTQELTAMFLALRLVCSIIMEADIHTVLDFATLASTAWVIYMIRFKLKSTYIKELDNFPIYYIAVPSAILAFIVHPSNRLINLSGILWAFCVYVESVSVLPQLRLMQNAKMIEPFTSHYVFALGVARFLSFAHWILQLIETRGRYLFLLGHGYLWFPVAFLAEMIQTFILADFCYYYIKSLKEGQLLMRMPI
*******KSCLAVVFTVCSLVAMKLFVKNHDYFFVASEAIHAAGIMVLIYKLTTKNTCSGLSLKTQELTAMFLALRLVCSIIMEADIHTVLDFATLASTAWVIYMIRFKLKSTYIKELDNFPIYYIAVPSAILAFIVHPSNRLINLSGILWAFCVYVESVSVLPQLRLMQNAKMIEPFTSHYVFALGVARFLSFAHWILQLIETRGRYLFLLGHGYLWFPVAFLAEMIQTFILADFCYYYIKSLKEG********
******V***LAVVFTVCSLVAMKLFVKNHDYFFVASEAIHAAGIMVLIYKLTTKNTCSGLSLKTQELTAMFLALRLVCSIIMEADIHTVLDFATLASTAWVIYMIRFKLKSTYIKELDNFPIYYIAVPSAILAFIVHPSNRLINLSGILWAFCVYVESVSVLPQLRLMQNAKMIEPFTSHYVFALGVARFLSFAHWILQLIETRGRYLFLLGHGYLWFPVAFLAEMIQTFILADFCYYYIKSLKEGQLLMRMPI
********SCLAVVFTVCSLVAMKLFVKNHDYFFVASEAIHAAGIMVLIYKLTTKNTCSGLSLKTQELTAMFLALRLVCSIIMEADIHTVLDFATLASTAWVIYMIRFKLKSTYIKELDNFPIYYIAVPSAILAFIVHPSNRLINLSGILWAFCVYVESVSVLPQLRLMQNAKMIEPFTSHYVFALGVARFLSFAHWILQLIETRGRYLFLLGHGYLWFPVAFLAEMIQTFILADFCYYYIKSLKEGQLLMRMPI
*RQPTKVKSCLAVVFTVCSLVAMKLFVKNHDYFFVASEAIHAAGIMVLIYKLTTKNTCSGLSLKTQELTAMFLALRLVCSIIMEADIHTVLDFATLASTAWVIYMIRFKLKSTYIKELDNFPIYYIAVPSAILAFIVHPSNRLINLSGILWAFCVYVESVSVLPQLRLMQNAKMIEPFTSHYVFALGVARFLSFAHWILQLIETRGRYLFLLGHGYLWFPVAFLAEMIQTFILADFCYYYIKSLKEGQLLMRMPI
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiii
iiiiiiiiiHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiii
iiiiiiiHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiii
SSSSSSSSSSSSiiHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiii
iiiiiiHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MRQPTKVKSCLAVVFTVCSLVAMKLFVKNHDYFFVASEAIHAAGIMVLIYKLTTKNTCSGLSLKTQELTAMFLALRLVCSIIMEADIHTVLDFATLASTAWVIYMIRFKLKSTYIKELDNFPIYYIAVPSAILAFIVHPSNRLINLSGILWAFCVYVESVSVLPQLRLMQNAKMIEPFTSHYVFALGVARFLSFAHWILQLIETRGRYLFLLGHGYLWFPVAFLAEMIQTFILADFCYYYIKSLKEGQLLMRMPI
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query255 2.2.26 [Sep-21-2011]
Q5XHA2212 ER lumen protein retainin yes no 0.760 0.915 0.352 4e-22
O94270212 ER lumen protein retainin yes no 0.815 0.981 0.312 6e-22
O44017215 ER lumen protein retainin N/A no 0.792 0.939 0.296 7e-22
Q611C8213 ER lumen protein retainin N/A no 0.815 0.976 0.291 3e-21
Q09473213 Putative ER lumen protein yes no 0.733 0.877 0.331 4e-21
Q68ES4212 ER lumen protein retainin N/A no 0.760 0.915 0.338 4e-21
Q6PAB8212 ER lumen protein retainin N/A no 0.768 0.924 0.331 5e-21
O76767212 ER lumen protein retainin yes no 0.807 0.971 0.299 2e-20
Q86JE5218 ER lumen protein retainin yes no 0.8 0.935 0.301 3e-20
P33948221 ER lumen protein retainin yes no 0.768 0.886 0.301 5e-20
>sp|Q5XHA2|ERD21_XENTR ER lumen protein retaining receptor 1 OS=Xenopus tropicalis GN=kdelr1 PE=2 SV=1 Back     alignment and function desciption
 Score =  105 bits (261), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 75/213 (35%), Positives = 116/213 (54%), Gaps = 19/213 (8%)

Query: 41  HAAGIMVLIYKLTTKNTCSGLSLKTQELTAMFLALR---LVCSIIMEADIHTVLDFATLA 97
           H + I++L+ K+    +C+G+S K+Q L A+    R   L  + I  +  +T +    +A
Sbjct: 12  HLSAILILLLKIWKSRSCAGISGKSQLLFAIVFTTRYLDLFTNFI--SLYNTSMKMVYVA 69

Query: 98  STAWVIYMIRFKLKSTYIKELDNFPIYYIAVPSAILAFIVHPSNRLINLSGILWAFCVYV 157
           S+   I+MI  K K+TY    D F + ++ VP+AILAF+V   N       ILW F +Y+
Sbjct: 70  SSYATIWMIYSKFKATYDGNHDTFRVEFLIVPTAILAFLV---NHDFTPLEILWTFSIYL 126

Query: 158 ESVSVLPQLRLMQNAKMIEPFTSHYVFALGVARFLSFAHWILQLIETRGRYLFLLGHGYL 217
           ESV++LPQL ++      E  TSHY+FALG+ R L   +WI        RY F    G+ 
Sbjct: 127 ESVAILPQLFMVSKTGEAETITSHYLFALGIYRALYLFNWIW-------RYQF---EGFF 176

Query: 218 WFPVAFLAEMIQTFILADFCYYYIKSLKEGQLL 250
              +A +A ++QT +  DF Y YI  + +G+ L
Sbjct: 177 DL-IAIVAGLVQTVLYCDFFYLYITKVLKGKKL 208




Required for the retention of luminal endoplasmic reticulum proteins. Determines the specificity of the luminal ER protein retention system. Also required for normal vesicular traffic through the Golgi. This receptor recognizes K-D-E-L.
Xenopus tropicalis (taxid: 8364)
>sp|O94270|ERD2_SCHPO ER lumen protein retaining receptor OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=erd2 PE=3 SV=1 Back     alignment and function description
>sp|O44017|ERD2_ENTHI ER lumen protein retaining receptor OS=Entamoeba histolytica GN=ERD2 PE=3 SV=1 Back     alignment and function description
>sp|Q611C8|ERD2_CAEBR ER lumen protein retaining receptor OS=Caenorhabditis briggsae GN=erd-2 PE=3 SV=1 Back     alignment and function description
>sp|Q09473|ERD22_CAEEL Putative ER lumen protein retaining receptor C28H8.4 OS=Caenorhabditis elegans GN=C28H8.4 PE=3 SV=1 Back     alignment and function description
>sp|Q68ES4|ER21B_XENLA ER lumen protein retaining receptor 1-B OS=Xenopus laevis GN=kdelr1-b PE=2 SV=1 Back     alignment and function description
>sp|Q6PAB8|ER21A_XENLA ER lumen protein retaining receptor 1-A OS=Xenopus laevis GN=kdelr1-a PE=2 SV=1 Back     alignment and function description
>sp|O76767|ERD2_DROME ER lumen protein retaining receptor OS=Drosophila melanogaster GN=KdelR PE=2 SV=1 Back     alignment and function description
>sp|Q86JE5|ERD2_DICDI ER lumen protein retaining receptor OS=Dictyostelium discoideum GN=kdelr PE=3 SV=1 Back     alignment and function description
>sp|P33948|ERD2_PLAFA ER lumen protein retaining receptor OS=Plasmodium falciparum GN=ERD2 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query255
224069870271 predicted protein [Populus trichocarpa] 0.996 0.937 0.744 1e-107
359495840274 PREDICTED: ER lumen protein retaining re 0.988 0.919 0.715 1e-101
15230808272 ER lumen protein retaining receptor fami 0.996 0.933 0.677 1e-100
255580541255 ER lumen protein retaining receptor, put 0.933 0.933 0.708 1e-99
28393144272 putative ER lumen protein retaining rece 0.996 0.933 0.673 1e-99
297835602272 ER lumen protein retaining receptor fami 0.996 0.933 0.665 5e-99
9294172260 ER lumen protein retaining receptor-like 0.945 0.926 0.684 2e-94
449437202272 PREDICTED: ER lumen protein retaining re 0.988 0.926 0.636 3e-92
224080568272 predicted protein [Populus trichocarpa] 0.988 0.926 0.640 9e-92
224103251272 predicted protein [Populus trichocarpa] 0.988 0.926 0.636 1e-91
>gi|224069870|ref|XP_002303063.1| predicted protein [Populus trichocarpa] gi|222844789|gb|EEE82336.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  394 bits (1011), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 189/254 (74%), Positives = 213/254 (83%)

Query: 2   RQPTKVKSCLAVVFTVCSLVAMKLFVKNHDYFFVASEAIHAAGIMVLIYKLTTKNTCSGL 61
           RQ  KVK    VVF +CSLVA+K  VK+H+YFF+ SEAIHAAGI VLIYKLTT  TCSGL
Sbjct: 18  RQSMKVKILAGVVFALCSLVALKHSVKDHEYFFIFSEAIHAAGIFVLIYKLTTHKTCSGL 77

Query: 62  SLKTQELTAMFLALRLVCSIIMEADIHTVLDFATLASTAWVIYMIRFKLKSTYIKELDNF 121
           SLKTQE+TA+FLA RL CS++ME D H+VLD ATL STAWVIYMIRFKLKSTYIKELDN 
Sbjct: 78  SLKTQEITALFLAARLACSVLMELDAHSVLDMATLISTAWVIYMIRFKLKSTYIKELDNM 137

Query: 122 PIYYIAVPSAILAFIVHPSNRLINLSGILWAFCVYVESVSVLPQLRLMQNAKMIEPFTSH 181
           P+YY+ VP  ILA IV+P  R    S +LWAFCV++ESVSVLPQLRLMQNAKMIEPFT+H
Sbjct: 138 PLYYLVVPCIILALIVNPFTRFCYFSQVLWAFCVFLESVSVLPQLRLMQNAKMIEPFTAH 197

Query: 182 YVFALGVARFLSFAHWILQLIETRGRYLFLLGHGYLWFPVAFLAEMIQTFILADFCYYYI 241
           YVFALGVARFLS AHWI+Q+ ETRG YLFL+G GY WFP A LAE +QTFILADFCYYY+
Sbjct: 198 YVFALGVARFLSCAHWIIQVYETRGMYLFLIGSGYFWFPAALLAEAVQTFILADFCYYYV 257

Query: 242 KSLKEGQLLMRMPI 255
           KS  +GQLLMRMP+
Sbjct: 258 KSFVQGQLLMRMPV 271




Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359495840|ref|XP_002270894.2| PREDICTED: ER lumen protein retaining receptor [Vitis vinifera] Back     alignment and taxonomy information
>gi|15230808|ref|NP_189152.1| ER lumen protein retaining receptor family protein [Arabidopsis thaliana] gi|56381977|gb|AAV85707.1| At3g25160 [Arabidopsis thaliana] gi|332643465|gb|AEE76986.1| ER lumen protein retaining receptor family protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|255580541|ref|XP_002531095.1| ER lumen protein retaining receptor, putative [Ricinus communis] gi|223529341|gb|EEF31309.1| ER lumen protein retaining receptor, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|28393144|gb|AAO42005.1| putative ER lumen protein retaining receptor [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297835602|ref|XP_002885683.1| ER lumen protein retaining receptor family protein [Arabidopsis lyrata subsp. lyrata] gi|297331523|gb|EFH61942.1| ER lumen protein retaining receptor family protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|9294172|dbj|BAB02074.1| ER lumen protein retaining receptor-like protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|449437202|ref|XP_004136381.1| PREDICTED: ER lumen protein retaining receptor-like [Cucumis sativus] gi|449505760|ref|XP_004162562.1| PREDICTED: ER lumen protein retaining receptor-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|224080568|ref|XP_002306165.1| predicted protein [Populus trichocarpa] gi|222849129|gb|EEE86676.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224103251|ref|XP_002312984.1| predicted protein [Populus trichocarpa] gi|222849392|gb|EEE86939.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query255
TAIR|locus:2090255272 AT3G25160 "AT3G25160" [Arabido 0.996 0.933 0.677 3.8e-94
TAIR|locus:2198601272 AT1G19970 "AT1G19970" [Arabido 0.988 0.926 0.620 1.1e-85
TAIR|locus:2047052269 AT2G21190 "AT2G21190" [Arabido 0.988 0.936 0.616 4.4e-84
TAIR|locus:2005619272 AT1G75760 "AT1G75760" [Arabido 0.988 0.926 0.608 5.6e-84
TAIR|locus:2141796273 AT4G38790 "AT4G38790" [Arabido 0.988 0.923 0.608 5.6e-84
WB|WBGene00016195213 C28H8.4 [Caenorhabditis elegan 0.819 0.981 0.321 3.5e-27
TAIR|locus:2086954215 ERD2B "AT3G25040" [Arabidopsis 0.815 0.967 0.315 6.6e-26
CGD|CAL0004240212 orf19.2756 [Candida albicans ( 0.749 0.900 0.352 2.9e-25
POMBASE|SPBP8B7.22212 erd2 "HDEL receptor (predicted 0.815 0.981 0.316 7.6e-25
UNIPROTKB|F2Z4Z3212 KDELR1 "ER lumen protein retai 0.768 0.924 0.341 9.7e-25
TAIR|locus:2090255 AT3G25160 "AT3G25160" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 937 (334.9 bits), Expect = 3.8e-94, P = 3.8e-94
 Identities = 172/254 (67%), Positives = 214/254 (84%)

Query:     2 RQPTKVKSCLAVVFTVCSLVAMKLFVKNHDYFFVASEAIHAAGIMVLIYKLTTKNTCSGL 61
             +Q  KVK  L ++ ++  +V +K  V+NH++FF+ASE IHAAGI++LIYKLT + TCSGL
Sbjct:    19 QQSNKVKIALGIIISLILVVLLKFTVRNHNHFFIASELIHAAGILILIYKLTRQKTCSGL 78

Query:    62 SLKTQELTAMFLALRLVCSIIMEADIHTVLDFATLASTAWVIYMIRFKLKSTYIKELDNF 121
             SLK+QE+TA+FLA+RL+CSI ME DIHTVLDFATL ST WVIYMIR+KLK++YIK LD  
Sbjct:    79 SLKSQEVTAIFLAVRLICSINMEGDIHTVLDFATLVSTLWVIYMIRYKLKASYIKSLDTC 138

Query:   122 PIYYIAVPSAILAFIVHPSNRLINLSGILWAFCVYVESVSVLPQLRLMQNAKMIEPFTSH 181
               YY+ VPSAILA I++PS        ILWAFCVY ESVSVLPQLRLMQNA++IEPFT+H
Sbjct:   139 YNYYVLVPSAILALIINPSTSYSYFHRILWAFCVYTESVSVLPQLRLMQNAQIIEPFTAH 198

Query:   182 YVFALGVARFLSFAHWILQLIETRGRYLFLLGHGYLWFPVAFLAEMIQTFILADFCYYYI 241
             YVFALG+ARFL+ AHWI+Q++ETRG YL+LLG GY WFPVA LAE++QTFILADFCYYY+
Sbjct:   199 YVFALGIARFLACAHWIIQVVETRGHYLWLLGAGYFWFPVALLAEIVQTFILADFCYYYV 258

Query:   242 KSLKEGQLLMRMPI 255
             KS+ EGQL+++MP+
Sbjct:   259 KSVMEGQLVLKMPV 272




GO:0004872 "receptor activity" evidence=ISS
GO:0005739 "mitochondrion" evidence=ISM
GO:0006621 "protein retention in ER lumen" evidence=IEA
GO:0015031 "protein transport" evidence=ISS
GO:0016021 "integral to membrane" evidence=IEA;ISS
GO:0046923 "ER retention sequence binding" evidence=IEA
TAIR|locus:2198601 AT1G19970 "AT1G19970" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2047052 AT2G21190 "AT2G21190" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2005619 AT1G75760 "AT1G75760" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2141796 AT4G38790 "AT4G38790" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
WB|WBGene00016195 C28H8.4 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
TAIR|locus:2086954 ERD2B "AT3G25040" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
CGD|CAL0004240 orf19.2756 [Candida albicans (taxid:5476)] Back     alignment and assigned GO terms
POMBASE|SPBP8B7.22 erd2 "HDEL receptor (predicted)" [Schizosaccharomyces pombe (taxid:4896)] Back     alignment and assigned GO terms
UNIPROTKB|F2Z4Z3 KDELR1 "ER lumen protein retaining receptor" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
O94270ERD2_SCHPONo assigned EC number0.31250.81560.9811yesno

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query255
pfam00810143 pfam00810, ER_lumen_recept, ER lumen protein retai 5e-43
COG5196214 COG5196, ERD2, ER lumen protein retaining receptor 1e-31
>gnl|CDD|144416 pfam00810, ER_lumen_recept, ER lumen protein retaining receptor Back     alignment and domain information
 Score =  142 bits (361), Expect = 5e-43
 Identities = 60/147 (40%), Positives = 91/147 (61%), Gaps = 8/147 (5%)

Query: 57  TCSGLSLKTQELTAMFLALRLVCSIIMEADI---HTVLDFATLASTAWVIYMIRFKLKST 113
           +CSGLSLKTQ L A+    R +   + E  I   +T++    + S+ + IY+++FK K+T
Sbjct: 1   SCSGLSLKTQILYAIVFLTRYLD--LFEGYISLYNTIMKILFIVSSVYTIYLMKFKYKAT 58

Query: 114 YIKELDNFPIYYIAVPSAILAFIVHPSNRLINLSGILWAFCVYVESVSVLPQLRLMQNAK 173
           Y +++D F I Y+ VP  +LA I H S   +    ILW F +Y+ESV++LPQL ++Q   
Sbjct: 59  YDRDIDTFKIEYLIVPCLVLALIFHHSYSFLE---ILWTFSIYLESVAILPQLFMLQKTG 115

Query: 174 MIEPFTSHYVFALGVARFLSFAHWILQ 200
            +E  TSHY+FALG+ R L   +WI +
Sbjct: 116 EVENLTSHYLFALGLYRALYILNWIYR 142


Length = 143

>gnl|CDD|227523 COG5196, ERD2, ER lumen protein retaining receptor [Intracellular trafficking and secretion] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 255
KOG3106212 consensus ER lumen protein retaining receptor [Int 100.0
COG5196214 ERD2 ER lumen protein retaining receptor [Intracel 100.0
PF00810147 ER_lumen_recept: ER lumen protein retaining recept 100.0
TIGR00951220 2A43 Lysosomal Cystine Transporter. 96.34
KOG3211230 consensus Predicted endoplasmic reticulum membrane 95.16
PF0419361 PQ-loop: PQ loop repeat 93.93
PF0419361 PQ-loop: PQ loop repeat 93.56
PHA02246192 hypothetical protein 88.28
smart0067932 CTNS Repeated motif present between transmembrane 86.53
>KOG3106 consensus ER lumen protein retaining receptor [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
Probab=100.00  E-value=8e-85  Score=561.54  Aligned_cols=211  Identities=42%  Similarity=0.760  Sum_probs=204.2

Q ss_pred             chhHHHHhhHHHHHHHHHHHHHHhhccccccccchhhHHHHHHHHhhhhhhee-echhHHHHHHHHHHHHHHHHHHhhhc
Q 025243           30 HDYFFVASEAIHAAGIMVLIYKLTTKNTCSGLSLKTQELTAMFLALRLVCSII-MEADIHTVLDFATLASTAWVIYMIRF  108 (255)
Q Consensus        30 ~~~~~llgdl~hl~s~~iLl~KI~~~kS~~GiSlkTQ~Ly~lVf~~R~~~~~~-~~y~~~~i~k~~~l~~s~~iiyli~~  108 (255)
                      +|.||++||++|++|+++|++||+|+|||+|+|+|||+|||+||++||+|+|. .++++|++||+++++++.+++|+|++
T Consensus         1 mn~fr~~gd~~H~~~i~vLi~Ki~ktrsCaGiSlKSQ~L~Alvf~~Ryldlf~~~~s~ynt~mki~fl~~t~~ivymi~~   80 (212)
T KOG3106|consen    1 MNNFRFAGDLSHLAAIIVLILKIWKTKSCAGISLKSQELFALVFATRYLDLFTFYESLYNTIMKIAFLASTLWIVYMIRF   80 (212)
T ss_pred             CcchhhHHHHHHHHHHHHHHHHHHhcCccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            58999999999999999999999999999999999999999999999999987 56678999999999999999999999


Q ss_pred             cCcccchhccccccchhhhhhHHHHHHHhCCCCCcchhhhHHHHHHHHHHHhhhhhHHHHHHhcccccchHHHHHHHHHH
Q 025243          109 KLKSTYIKELDNFPIYYIAVPSAILAFIVHPSNRLINLSGILWAFCVYVESVSVLPQLRLMQNAKMIEPFTSHYVFALGV  188 (255)
Q Consensus       109 ~yk~TY~~~~Dtf~~~~liiP~~vLali~~~~~~~~~~~eilWtFSiyLEsVAILPQL~mlqk~g~ve~lTshYv~~LG~  188 (255)
                      |+|+|||+|+|||+++|+++||+++|+++||+.+   +.|++||||+|||||||||||+|+||+||+|++|+||+||||+
T Consensus        81 k~~~tYd~~~DtFri~~llvp~~vlsl~i~~~~t---~~eilWtFsiyLEsVaILPQL~~lq~tg~~E~~TahYvfaLG~  157 (212)
T KOG3106|consen   81 KLRATYDKEKDTFRIEYLLVPSAVLSLLINHSFT---ILEILWTFSIYLESVAILPQLFMLQKTGEAETITAHYLFALGL  157 (212)
T ss_pred             HHHHHHhcccCceeEEEEehhheeeeeeecCCcc---HHHHHHHHHHHHHHHHHhHHHHHHHhcCCccchHHHHHHHHHH
Confidence            9999999999999999999999999999999854   8999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhhccccccccCCCccchhHHHHHHHHHHHHHhhhhhhhhHhhhcCCccccCCC
Q 025243          189 ARFLSFAHWILQLIETRGRYLFLLGHGYLWFPVAFLAEMIQTFILADFCYYYIKSLKEGQLLMRMPI  255 (255)
Q Consensus       189 yR~ly~~~Wi~ry~~~~~~~~~~~g~g~~~~~~~ii~givQt~ly~DF~y~Y~k~v~~G~~~~~Lp~  255 (255)
                      ||++|++|||+|+.+|+           +|+++++++|+|||++||||||+|++++++|+| .+||+
T Consensus       158 yR~ly~~~WI~r~~~e~-----------~~~~iai~agiVQT~ly~DFfy~Y~~~v~~g~~-~~LP~  212 (212)
T KOG3106|consen  158 YRALYIANWIYRYVTED-----------FWDPIAIVAGIVQTVLYADFFYLYVTKVLQGKK-LKLPA  212 (212)
T ss_pred             HHHHHHHHHHHHHHhhc-----------cccchHHHHHHHHHHHHHhHHHHHHHHHHcCCc-CCCCC
Confidence            99999999999999875           689999999999999999999999999999999 89995



>COG5196 ERD2 ER lumen protein retaining receptor [Intracellular trafficking and secretion] Back     alignment and domain information
>PF00810 ER_lumen_recept: ER lumen protein retaining receptor; InterPro: IPR000133 Proteins resident in the lumen of the endoplasmic reticulum (ER) contain a C-terminal tetrapeptide, commonly known as Lys-Asp-Glu-Leu (KDEL) in mammals and His-Asp-Glu-Leu (HDEL) in yeast (Saccharomyces cerevisiae) that acts as a signal for their retrieval from subsequent compartments of the secretory pathway Back     alignment and domain information
>TIGR00951 2A43 Lysosomal Cystine Transporter Back     alignment and domain information
>KOG3211 consensus Predicted endoplasmic reticulum membrane protein Lec35/MPDU1 involved in monosaccharide-P-dolichol utilization [General function prediction only] Back     alignment and domain information
>PF04193 PQ-loop: PQ loop repeat Back     alignment and domain information
>PF04193 PQ-loop: PQ loop repeat Back     alignment and domain information
>PHA02246 hypothetical protein Back     alignment and domain information
>smart00679 CTNS Repeated motif present between transmembrane helices in cystinosin, yeast ERS1p, mannose-P-dolichol utilization defect 1, and other hypothetical proteins Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00