Citrus Sinensis ID: 025280

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-----
MELSVPARLVHLSISSTSSRRLLVKPKTNLSRKLLPISTQYCSSTRRMNSLTTPRASLNPDGDSKHNNGSASTSSAVDSGRIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRPHLNYDLQIPTQRVGTYDTQLVEHFFQSLVNTSGMTLHIRQLKRGSTTILILHGIHGLGMGFFM
ccccccccccccccccccccccccccccccccccccccccEEEccccccccccccccccccccccccccHHHHHHHcccccEEEEEEEccccEEEEEEEEccccccccccccccHHHHHHHHHHHcccccEEEEcccccccccccHHHHHHHHHHHHHHHHcccccccccccEEcccccccEEEEEEccccccEEEEEccccccccccccccHHHHHHHHHHHccccEEEEEcccccccHHHHHHHHHHHHHccc
cccccccccccccccccccccccccccccEEEccccccHHHHHHcccccccccHHHHHccccccccccHHHHHHHHHccccEEEEEEEcEEEEEEEEEEccccccccccccHcHHHHHHHHHHHcccEEEEEEEEccEEEcccccHHHHHHHHHHHHHHHHcccccccEccEEEEcHHHHHHHHHHHcccccEEEEEEEccHHccccccHHHHHHHHHHHHHHHcccEEHHHcccccccHHHHHHHHHHHHHHcc
MELSVPARLVHLSIsstssrrllvkpktnlsrkllpistqycsstrrmnslttpraslnpdgdskhnngsastssavdsgrigevkrvtkeTNVSVKINvdgsgvadsstcipfLDHMLDQLAShglfdvhvratgdihiddhhtnedVGLAIGTALLQALgdrkginrfgdftapLDEALIHVSldlsgrphlnydlqiptqrvgtydTQLVEHFFQSLVNTSGMTLHIRQLKRGSTTILILHGihglgmgffm
melsvparlvhlsisstssrrllvkpktnlsrkllpistqycsstrrmnslttpraslnpdgdskhnngsastssavdsgrigevkrvtketnvsvkinvdgsgvaDSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRPHLNYDLQIPTQRVGTYDTQLVEHFFQSLVNTSGMTLHIRQLKRGSTTILILHGIHglgmgffm
MELSVPArlvhlsisstssrrllVKPKTNLSRKLLPISTQYCSSTRRMNSLTTPRASLNPDGDSKHNNGSASTSSAVDSGRIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRPHLNYDLQIPTQRVGTYDTQLVEHFFQSLVNTSGMTLHIRQLKRGSTTililhgihglgMGFFM
********************************************************************************************NVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRPHLNYDLQIPTQRVGTYDTQLVEHFFQSLVNTSGMTLHIRQLKRGSTTILILHGIHGLGMGFF*
********LV**************KPKTNLSRKLLPISTQYCSSTRRMNSLTTPRASLNPDGDSKHNNGSASTS**V**GRIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRPHLNYDLQIPTQRVGTYDTQLVEHFFQSLVNTSGMTLHIRQLKRGSTTILILHGIHGLGMGFFM
MELSVPARLVHLSISSTSSRRLLVKPKTNLSRKLLPISTQYCSSTRRMNSLTTPRASLNPDG******************RIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRPHLNYDLQIPTQRVGTYDTQLVEHFFQSLVNTSGMTLHIRQLKRGSTTILILHGIHGLGMGFFM
********************RLLVKPKTNLSRKLLPISTQYCSSTRRMNSLTTPRASLNPDGDSKHNNGSASTSSAVDSGRIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRPHLNYDLQIPTQRVGTYDTQLVEHFFQSLVNTSGMTLHIRQLKRGSTTILILHGIHGLGMGFFM
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooo
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MELSVPARLVHLSISSTSSRRLLVKPKTNLSRKLLPISTQYCSSTRRMNSLTTPRASLNPDGDSKHNNGSASTSSAVDSGRIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRPHLNYDLQIPTQRVGTYDTQLVEHFFQSLVNTSGMTLHIRQLKRGSTTILILHGIHGLGMGFFM
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query255 2.2.26 [Sep-21-2011]
Q43072281 Imidazoleglycerol-phospha N/A no 0.819 0.743 0.727 1e-83
O23346272 Imidazoleglycerol-phospha yes no 0.878 0.823 0.691 1e-83
P34047270 Imidazoleglycerol-phospha no no 0.862 0.814 0.690 7e-81
P34048195 Imidazoleglycerol-phospha N/A no 0.592 0.774 0.860 1e-71
Q05068209 Imidazoleglycerol-phospha yes no 0.6 0.732 0.686 9e-58
B0JJ52209 Imidazoleglycerol-phospha yes no 0.623 0.760 0.691 9e-58
Q8DMI3210 Imidazoleglycerol-phospha yes no 0.6 0.728 0.699 1e-57
A5GID0202 Imidazoleglycerol-phospha yes no 0.6 0.757 0.660 2e-57
A9BDS9208 Imidazoleglycerol-phospha yes no 0.6 0.735 0.673 3e-57
Q3AN36202 Imidazoleglycerol-phospha yes no 0.6 0.757 0.660 3e-57
>sp|Q43072|HIS7_PEA Imidazoleglycerol-phosphate dehydratase OS=Pisum sativum GN=HIS3 PE=2 SV=1 Back     alignment and function desciption
 Score =  309 bits (792), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 163/224 (72%), Positives = 175/224 (78%), Gaps = 15/224 (6%)

Query: 22  LLVKPK------TNLSRKLLPISTQYCSS-----TRRMNSLTTPRASLNPDGDSKHNNGS 70
            L KPK      T    K  P    + S      T  MN  TT   SL+     +HNNGS
Sbjct: 17  FLFKPKITTFHTTLFPTKFAPFKASFFSPNHLTLTTPMNPPTT---SLSSAAFVEHNNGS 73

Query: 71  ASTSSAV-DSGRIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFD 129
            STS       R+GEVKRVTKETNVSVKIN+DGSGVADSST IPFLDHMLDQLASHGLFD
Sbjct: 74  TSTSLPFHPETRVGEVKRVTKETNVSVKINLDGSGVADSSTGIPFLDHMLDQLASHGLFD 133

Query: 130 VHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLS 189
           VHV+ATGD+HIDDHHTNEDV LAIGTALLQALGDRKGINRFGDF+APLDEALIHVSLDLS
Sbjct: 134 VHVKATGDVHIDDHHTNEDVALAIGTALLQALGDRKGINRFGDFSAPLDEALIHVSLDLS 193

Query: 190 GRPHLNYDLQIPTQRVGTYDTQLVEHFFQSLVNTSGMTLHIRQL 233
           GRPHL+Y+L IPTQRVGTYDTQ+VEHF QS+VNTSGMTLHIRQL
Sbjct: 194 GRPHLSYNLDIPTQRVGTYDTQVVEHFLQSIVNTSGMTLHIRQL 237

Pisum sativum (taxid: 3888)
EC: 4EC: .EC: 2EC: .EC: 1EC: .EC: 1EC: 9
>sp|O23346|HIS7B_ARATH Imidazoleglycerol-phosphate dehydratase 2 OS=Arabidopsis thaliana GN=At4g14910 PE=2 SV=2 Back     alignment and function description
>sp|P34047|HIS7A_ARATH Imidazoleglycerol-phosphate dehydratase 1 OS=Arabidopsis thaliana GN=At3g22425 PE=1 SV=1 Back     alignment and function description
>sp|P34048|HIS7_WHEAT Imidazoleglycerol-phosphate dehydratase (Fragment) OS=Triticum aestivum PE=2 SV=1 Back     alignment and function description
>sp|Q05068|HIS7_NOSS1 Imidazoleglycerol-phosphate dehydratase OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=hisB PE=3 SV=1 Back     alignment and function description
>sp|B0JJ52|HIS7_MICAN Imidazoleglycerol-phosphate dehydratase OS=Microcystis aeruginosa (strain NIES-843) GN=hisB PE=3 SV=1 Back     alignment and function description
>sp|Q8DMI3|HIS7_THEEB Imidazoleglycerol-phosphate dehydratase OS=Thermosynechococcus elongatus (strain BP-1) GN=hisB PE=3 SV=1 Back     alignment and function description
>sp|A5GID0|HIS7_SYNPW Imidazoleglycerol-phosphate dehydratase OS=Synechococcus sp. (strain WH7803) GN=hisB PE=3 SV=1 Back     alignment and function description
>sp|A9BDS9|HIS7_PROM4 Imidazoleglycerol-phosphate dehydratase OS=Prochlorococcus marinus (strain MIT 9211) GN=hisB PE=3 SV=1 Back     alignment and function description
>sp|Q3AN36|HIS7_SYNSC Imidazoleglycerol-phosphate dehydratase OS=Synechococcus sp. (strain CC9605) GN=hisB PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query255
297800716271 hypothetical protein ARALYDRAFT_915339 [ 0.874 0.822 0.691 4e-83
2495230281 RecName: Full=Imidazoleglycerol-phosphat 0.819 0.743 0.727 6e-82
388518005278 unknown [Lotus japonicus] 0.654 0.600 0.904 7e-82
18414338272 Imidazoleglycerol-phosphate dehydratase 0.878 0.823 0.691 7e-82
145333097308 Imidazoleglycerol-phosphate dehydratase 0.878 0.727 0.691 1e-81
334186541282 Imidazoleglycerol-phosphate dehydratase 0.878 0.794 0.691 2e-81
3982576274 imidazoleglycerol phosphate dehydratase 0.886 0.824 0.701 6e-80
88192813207 Chain A, X-Ray Structure Of Imidazolegly 0.639 0.787 0.889 6e-80
449492570277 PREDICTED: imidazoleglycerol-phosphate d 0.901 0.830 0.665 4e-79
30686639270 Imidazoleglycerol-phosphate dehydratase 0.862 0.814 0.690 4e-79
>gi|297800716|ref|XP_002868242.1| hypothetical protein ARALYDRAFT_915339 [Arabidopsis lyrata subsp. lyrata] gi|297314078|gb|EFH44501.1| hypothetical protein ARALYDRAFT_915339 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
 Score =  313 bits (802), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 164/237 (69%), Positives = 194/237 (81%), Gaps = 14/237 (5%)

Query: 1   MEL--SVPARLVHLSISSTSSRRLLVKPKTNLSRKLLPISTQYCSSTRRMNSLTTPRASL 58
           MEL  S PA+L+  ++SS    R+L+ P+T+++    P   ++     RM+S +  R S+
Sbjct: 1   MELLSSSPAQLLRPNLSS----RVLLPPRTSIAS--YPFPPRFL----RMDSQSQHRQSI 50

Query: 59  NPDGDSKHNNG--SASTSSAVDSGRIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLD 116
           +        NG  + +T+S ++S RIGEVKR TKETNVSVK+N+DG+GV+DSST IPFLD
Sbjct: 51  SCASSPPGGNGFPAITTASPIESARIGEVKRETKETNVSVKLNLDGNGVSDSSTGIPFLD 110

Query: 117 HMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAP 176
           HMLDQLASHGLFDVHVRATGDIHIDDHHTNEDV LAIGTALL+ALG+RKGINRFGDFTAP
Sbjct: 111 HMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVALAIGTALLKALGERKGINRFGDFTAP 170

Query: 177 LDEALIHVSLDLSGRPHLNYDLQIPTQRVGTYDTQLVEHFFQSLVNTSGMTLHIRQL 233
           LDEALIHVSLDLSGRP+L Y+L+IPTQRVGTYDTQLVEHFFQSLVNTSGMTLHIRQL
Sbjct: 171 LDEALIHVSLDLSGRPYLGYNLEIPTQRVGTYDTQLVEHFFQSLVNTSGMTLHIRQL 227

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|2495230|sp|Q43072.1|HIS7_PEA RecName: Full=Imidazoleglycerol-phosphate dehydratase; Short=IGPD gi|1381086|gb|AAB67738.1| imidazoleglycerol-phosphate dehydratase [Pisum sativum] Back     alignment and taxonomy information
>gi|388518005|gb|AFK47064.1| unknown [Lotus japonicus] Back     alignment and taxonomy information
>gi|18414338|ref|NP_567448.1| Imidazoleglycerol-phosphate dehydratase 2 [Arabidopsis thaliana] gi|259016248|sp|O23346.2|HIS7B_ARATH RecName: Full=Imidazoleglycerol-phosphate dehydratase 2; Short=IGPD 2 gi|15081690|gb|AAK82500.1| AT4g14910/dl3495c [Arabidopsis thaliana] gi|20334842|gb|AAM16177.1| AT4g14910/dl3495c [Arabidopsis thaliana] gi|332658120|gb|AEE83520.1| Imidazoleglycerol-phosphate dehydratase 2 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|145333097|ref|NP_001078391.1| Imidazoleglycerol-phosphate dehydratase 2 [Arabidopsis thaliana] gi|332658121|gb|AEE83521.1| Imidazoleglycerol-phosphate dehydratase 2 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|334186541|ref|NP_001190734.1| Imidazoleglycerol-phosphate dehydratase 2 [Arabidopsis thaliana] gi|332658122|gb|AEE83522.1| Imidazoleglycerol-phosphate dehydratase 2 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|3982576|gb|AAC83458.1| imidazoleglycerol phosphate dehydratase [Thlaspi goesingense] Back     alignment and taxonomy information
>gi|88192813|pdb|2F1D|A Chain A, X-Ray Structure Of Imidazoleglycerol-Phosphate Dehydratase gi|88192814|pdb|2F1D|B Chain B, X-Ray Structure Of Imidazoleglycerol-Phosphate Dehydratase gi|88192815|pdb|2F1D|C Chain C, X-Ray Structure Of Imidazoleglycerol-Phosphate Dehydratase gi|88192816|pdb|2F1D|D Chain D, X-Ray Structure Of Imidazoleglycerol-Phosphate Dehydratase gi|88192817|pdb|2F1D|E Chain E, X-Ray Structure Of Imidazoleglycerol-Phosphate Dehydratase gi|88192818|pdb|2F1D|F Chain F, X-Ray Structure Of Imidazoleglycerol-Phosphate Dehydratase gi|88192819|pdb|2F1D|G Chain G, X-Ray Structure Of Imidazoleglycerol-Phosphate Dehydratase gi|88192820|pdb|2F1D|H Chain H, X-Ray Structure Of Imidazoleglycerol-Phosphate Dehydratase gi|88192821|pdb|2F1D|I Chain I, X-Ray Structure Of Imidazoleglycerol-Phosphate Dehydratase gi|88192822|pdb|2F1D|J Chain J, X-Ray Structure Of Imidazoleglycerol-Phosphate Dehydratase gi|88192823|pdb|2F1D|K Chain K, X-Ray Structure Of Imidazoleglycerol-Phosphate Dehydratase gi|88192824|pdb|2F1D|L Chain L, X-Ray Structure Of Imidazoleglycerol-Phosphate Dehydratase gi|88192825|pdb|2F1D|M Chain M, X-Ray Structure Of Imidazoleglycerol-Phosphate Dehydratase gi|88192826|pdb|2F1D|N Chain N, X-Ray Structure Of Imidazoleglycerol-Phosphate Dehydratase gi|88192827|pdb|2F1D|O Chain O, X-Ray Structure Of Imidazoleglycerol-Phosphate Dehydratase gi|88192828|pdb|2F1D|P Chain P, X-Ray Structure Of Imidazoleglycerol-Phosphate Dehydratase Back     alignment and taxonomy information
>gi|449492570|ref|XP_004159035.1| PREDICTED: imidazoleglycerol-phosphate dehydratase-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|30686639|ref|NP_850625.1| Imidazoleglycerol-phosphate dehydratase 1 [Arabidopsis thaliana] gi|462273|sp|P34047.1|HIS7A_ARATH RecName: Full=Imidazoleglycerol-phosphate dehydratase 1; Short=IGPD 1 gi|437213|gb|AAA93196.1| imidazoleglycerolphosphate dehydratase [Arabidopsis thaliana] gi|9293878|dbj|BAB01781.1| imidazoleglycerol-phosphate dehydratase [Arabidopsis thaliana] gi|21593529|gb|AAM65496.1| imidazoleglycerol-phosphate dehydratase [Arabidopsis thaliana] gi|26452644|dbj|BAC43405.1| putative imidazoleglycerolphosphate dehydratase [Arabidopsis thaliana] gi|51971000|dbj|BAD44192.1| imidazoleglycerolphosphate dehydratase [Arabidopsis thaliana] gi|332643116|gb|AEE76637.1| Imidazoleglycerol-phosphate dehydratase 1 [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query255
TAIR|locus:2129500308 HISN5B "HISTIDINE BIOSYNTHESIS 0.811 0.672 0.745 3.9e-76
TAIR|locus:1005716545270 IGPD "imidazoleglycerol-phosph 0.643 0.607 0.890 2.1e-75
TIGR_CMR|SPO_1163195 SPO_1163 "imidazoleglycerol-ph 0.6 0.784 0.516 5.9e-41
TIGR_CMR|GSU_3098195 GSU_3098 "imidazoleglycerol-ph 0.588 0.769 0.506 2e-40
UNIPROTKB|Q9KSX1357 hisB "Histidine biosynthesis b 0.584 0.417 0.506 5.5e-38
TIGR_CMR|VC_1135357 VC_1135 "imidazoleglycerol-pho 0.584 0.417 0.506 5.5e-38
UNIPROTKB|P06987355 hisB "HisB" [Escherichia coli 0.588 0.422 0.509 1.5e-37
TIGR_CMR|CPS_3892361 CPS_3892 "imidazoleglycerol-ph 0.615 0.434 0.474 6.3e-37
TIGR_CMR|SO_2071363 SO_2071 "imidazoleglycerol-pho 0.627 0.440 0.459 4.6e-34
UNIPROTKB|P64368210 hisB "Imidazoleglycerol-phosph 0.635 0.771 0.426 3.7e-32
TAIR|locus:2129500 HISN5B "HISTIDINE BIOSYNTHESIS 5B" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 767 (275.1 bits), Expect = 3.9e-76, P = 3.9e-76
 Identities = 161/216 (74%), Positives = 178/216 (82%)

Query:    27 KTNLS-RKLLPISTQYCSS---TRR---MNSLTTPRASLNPDGDSKHNNG--SASTSSAV 77
             + NLS R LLP  T   SS     R   MNS +  R S++       +NG  + +T+S +
Sbjct:    13 RPNLSSRALLPPRTSIASSHPPPPRFLVMNSQSQHRPSISCASPPPGDNGFPAITTASPI 72

Query:    78 DSGRIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGD 137
             +S RIGEVKR TKETNVSVKIN+DG GV+DSST IPFLDHMLDQLASHGLFDVHVRATGD
Sbjct:    73 ESARIGEVKRETKETNVSVKINLDGHGVSDSSTGIPFLDHMLDQLASHGLFDVHVRATGD 132

Query:   138 IHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRPHLNYD 197
              HIDDHHTNEDV LAIGTALL+ALG+RKGINRFGDFTAPLDEALIHVSLDLSGRP+L Y+
Sbjct:   133 THIDDHHTNEDVALAIGTALLKALGERKGINRFGDFTAPLDEALIHVSLDLSGRPYLGYN 192

Query:   198 LQIPTQRVGTYDTQLVEHFFQSLVNTSGMTLHIRQL 233
             L+IPTQRVGTYDTQLVEHFFQSLVNTSGMTLHIRQL
Sbjct:   193 LEIPTQRVGTYDTQLVEHFFQSLVNTSGMTLHIRQL 228
GO:0000105 "histidine biosynthetic process" evidence=IEA;IGI;ISS
GO:0004424 "imidazoleglycerol-phosphate dehydratase activity" evidence=IEA;IGI;ISS
GO:0009507 "chloroplast" evidence=ISM
TAIR|locus:1005716545 IGPD "imidazoleglycerol-phosphate dehydratase" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TIGR_CMR|SPO_1163 SPO_1163 "imidazoleglycerol-phosphate dehydratase" [Ruegeria pomeroyi DSS-3 (taxid:246200)] Back     alignment and assigned GO terms
TIGR_CMR|GSU_3098 GSU_3098 "imidazoleglycerol-phosphate dehydratase" [Geobacter sulfurreducens PCA (taxid:243231)] Back     alignment and assigned GO terms
UNIPROTKB|Q9KSX1 hisB "Histidine biosynthesis bifunctional protein HisB" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)] Back     alignment and assigned GO terms
TIGR_CMR|VC_1135 VC_1135 "imidazoleglycerol-phosphate dehydratase/histidinol-phosphatase" [Vibrio cholerae O1 biovar El Tor (taxid:686)] Back     alignment and assigned GO terms
UNIPROTKB|P06987 hisB "HisB" [Escherichia coli K-12 (taxid:83333)] Back     alignment and assigned GO terms
TIGR_CMR|CPS_3892 CPS_3892 "imidazoleglycerol-phosphate dehydratase/histidinol-phosphatase" [Colwellia psychrerythraea 34H (taxid:167879)] Back     alignment and assigned GO terms
TIGR_CMR|SO_2071 SO_2071 "imidazoleglycerol-phosphate dehydratase/histidinol-phosphatase" [Shewanella oneidensis MR-1 (taxid:211586)] Back     alignment and assigned GO terms
UNIPROTKB|P64368 hisB "Imidazoleglycerol-phosphate dehydratase" [Mycobacterium tuberculosis (taxid:1773)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
B0VPC2HIS7_ACIBS4, ., 2, ., 1, ., 1, 90.53890.60390.7623yesno
A3PB03HIS7_PROM04, ., 2, ., 1, ., 1, 90.63520.61960.7860yesno
B0JJ52HIS7_MICAN4, ., 2, ., 1, ., 1, 90.69180.62350.7607yesno
Q13TQ6HIS7_BURXL4, ., 2, ., 1, ., 1, 90.52590.60390.7897yesno
Q2JNK3HIS7_SYNJB4, ., 2, ., 1, ., 1, 90.58890.63920.7912yesno
Q5P792HIS7_AROAE4, ., 2, ., 1, ., 1, 90.52590.60390.7897yesno
B0V8S1HIS7_ACIBY4, ., 2, ., 1, ., 1, 90.53890.60390.7623yesno
A2BP81HIS7_PROMS4, ., 2, ., 1, ., 1, 90.63520.61960.7860yesno
B2SZ63HIS7_BURPP4, ., 2, ., 1, ., 1, 90.53240.60390.7897yesno
Q31CQ1HIS7_PROM94, ., 2, ., 1, ., 1, 90.62890.61960.7860yesno
A8G2U2HIS7_PROM24, ., 2, ., 1, ., 1, 90.61630.61960.7860yesno
Q7V314HIS7_PROMP4, ., 2, ., 1, ., 1, 90.62890.61960.7860yesno
Q21U94HIS7_RHOFD4, ., 2, ., 1, ., 1, 90.53370.63920.7990yesno
Q43072HIS7_PEA4, ., 2, ., 1, ., 1, 90.72760.81960.7437N/Ano
O23346HIS7B_ARATH4, ., 2, ., 1, ., 1, 90.69190.87840.8235yesno
A2C0B5HIS7_PROM14, ., 2, ., 1, ., 1, 90.65820.61960.7783yesno
A5GWD4HIS7_SYNR34, ., 2, ., 1, ., 1, 90.65580.60390.7586yesno
A2BUR2HIS7_PROM54, ., 2, ., 1, ., 1, 90.62170.61170.7761yesno
Q46H93HIS7_PROMT4, ., 2, ., 1, ., 1, 90.65820.61960.7783yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
4th Layer4.2.1.190.946
3rd Layer4.2.10.963

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query255
PLN02800261 PLN02800, PLN02800, imidazoleglycerol-phosphate de 1e-107
PRK00951195 PRK00951, hisB, imidazoleglycerol-phosphate dehydr 2e-94
cd07914190 cd07914, IGPD, Imidazoleglycerol-phosphate dehydra 3e-90
COG0131195 COG0131, HisB, Imidazoleglycerol-phosphate dehydra 1e-84
pfam00475145 pfam00475, IGPD, Imidazoleglycerol-phosphate dehyd 9e-73
PRK05446354 PRK05446, PRK05446, imidazole glycerol-phosphate d 2e-72
PRK13598193 PRK13598, hisB, imidazoleglycerol-phosphate dehydr 3e-41
>gnl|CDD|215430 PLN02800, PLN02800, imidazoleglycerol-phosphate dehydratase Back     alignment and domain information 
 Score =  310 bits (797), Expect = e-107
 Identities = 150/222 (67%), Positives = 171/222 (77%), Gaps = 5/222 (2%)

Query: 15  SSTSSRRLLVKPKTNLSRKLLPISTQYCSSTRRMNSLTTPRASLNPDGDSKHNNGSASTS 74
           S++SS   L++PK +    LLP      SS            S      S     +AS+S
Sbjct: 4   SASSSAAQLLRPKLS-FIDLLPRRAAIVSSPSSSLPRFLRMESQLRQSIS----CAASSS 58

Query: 75  SAVDSGRIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRA 134
           S+   GRIGEVKRVTKETNVSVKIN+DG+GVADSST IPFLDHMLDQLASHGLFDVHV+A
Sbjct: 59  SSNALGRIGEVKRVTKETNVSVKINLDGTGVADSSTGIPFLDHMLDQLASHGLFDVHVKA 118

Query: 135 TGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRPHL 194
           TGD+ IDDHHTNEDV LAIGTALL+ALGDRKGINRFGDF+APLDEALI V LDLSGRP+L
Sbjct: 119 TGDLWIDDHHTNEDVALAIGTALLKALGDRKGINRFGDFSAPLDEALIEVVLDLSGRPYL 178

Query: 195 NYDLQIPTQRVGTYDTQLVEHFFQSLVNTSGMTLHIRQLKRG 236
            Y+L+IPT+RVG  DT++VEHFFQSLVN SGMT+HIRQL  G
Sbjct: 179 GYNLEIPTERVGDLDTEMVEHFFQSLVNNSGMTVHIRQLAAG 220

Length = 261
>gnl|CDD|234873 PRK00951, hisB, imidazoleglycerol-phosphate dehydratase; Validated Back     alignment and domain information
>gnl|CDD|153419 cd07914, IGPD, Imidazoleglycerol-phosphate dehydratase Back     alignment and domain information
>gnl|CDD|223209 COG0131, HisB, Imidazoleglycerol-phosphate dehydratase [Amino acid transport and metabolism] Back     alignment and domain information
>gnl|CDD|189563 pfam00475, IGPD, Imidazoleglycerol-phosphate dehydratase Back     alignment and domain information
>gnl|CDD|235471 PRK05446, PRK05446, imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional Back     alignment and domain information
>gnl|CDD|184171 PRK13598, hisB, imidazoleglycerol-phosphate dehydratase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 255
PLN02800261 imidazoleglycerol-phosphate dehydratase 100.0
COG0131195 HisB Imidazoleglycerol-phosphate dehydratase [Amin 100.0
PRK13598193 hisB imidazoleglycerol-phosphate dehydratase; Prov 100.0
PRK00951195 hisB imidazoleglycerol-phosphate dehydratase; Vali 100.0
cd07914190 IGPD Imidazoleglycerol-phosphate dehydratase. Imid 100.0
PRK05446354 imidazole glycerol-phosphate dehydratase/histidino 100.0
PF00475145 IGPD: Imidazoleglycerol-phosphate dehydratase; Int 100.0
KOG3143219 consensus Imidazoleglycerol-phosphate dehydratase 100.0
PRK05446354 imidazole glycerol-phosphate dehydratase/histidino 97.4
PLN02800261 imidazoleglycerol-phosphate dehydratase 97.33
PRK13598193 hisB imidazoleglycerol-phosphate dehydratase; Prov 97.32
cd07914190 IGPD Imidazoleglycerol-phosphate dehydratase. Imid 97.31
PRK00951195 hisB imidazoleglycerol-phosphate dehydratase; Vali 97.23
PF00475145 IGPD: Imidazoleglycerol-phosphate dehydratase; Int 96.92
COG0131195 HisB Imidazoleglycerol-phosphate dehydratase [Amin 96.37
KOG3143219 consensus Imidazoleglycerol-phosphate dehydratase 86.78
>PLN02800 imidazoleglycerol-phosphate dehydratase Back     alignment and domain information 
Probab=100.00  E-value=1.5e-90  Score=627.00  Aligned_cols=220  Identities=68%  Similarity=0.981  Sum_probs=200.7

Q ss_pred             eeccCcccccccccccccccccc-------ccccccccCCccCCCCCCCCCCCCCCCCCCCCCCCceEEEEeeeCCeEEE
Q 025280           23 LVKPKTNLSRKLLPISTQYCSST-------RRMNSLTTPRASLNPDGDSKHNNGSASTSSAVDSGRIGEVKRVTKETNVS   95 (255)
Q Consensus        23 ~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~a~i~R~TkET~I~   95 (255)
                      ++||+++ ++.++|.++++.++.       ++++.  +++++++|++         ..+++..+.|+++++|+|+||+|+
T Consensus        12 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~---------~~~~~~~~~R~a~v~R~TkET~I~   79 (261)
T PLN02800         12 LLRPKLS-FIDLLPRRAAIVSSPSSSLPRFLRMES--QLRQSISCAA---------SSSSSNALGRIGEVKRVTKETNVS   79 (261)
T ss_pred             hcCCCcc-ccccccccccccccccccccccccccc--ccCCCccccc---------ccCCCCccceeEEEEecccceEEE
Confidence            4789999 888888888866653       23333  4455555544         233444467999999999999999


Q ss_pred             EEEEeCCCceeeeecCCccHHHHHHHHHhhcCcceEEEEecCccccCCccchhhhhhHHHHHHHhcCCccccceecceec
Q 025280           96 VKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTA  175 (255)
Q Consensus        96 v~LnLDG~G~~~I~TGIgFlDHML~~~a~Hg~fdL~i~a~GDl~VD~HHtVEDvGI~LG~Al~~ALGdK~GI~RyG~a~v  175 (255)
                      |+|||||+|+++|+||||||||||+||++||+|||+|+|+||++||+|||||||||+|||||+||||||+||+|||++++
T Consensus        80 v~l~LDG~G~~~i~TGi~FlDHML~~~a~Hg~fdL~V~a~GDl~vD~HHtvEDvgI~LG~Al~~ALGdk~GI~RyG~a~v  159 (261)
T PLN02800         80 VKINLDGTGVADSSTGIPFLDHMLDQLASHGLFDVHVKATGDLWIDDHHTNEDVALAIGTALLKALGDRKGINRFGDFSA  159 (261)
T ss_pred             EEEEeCCCCceeeecCccHHHHHHHHHHHHcCCCeEEEEecCccccCCCchhhhhhhHHHHHHHHhcCccccceeEeeee
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccccceeEEEEEcCCCceeEEeccCCcceecccccccHHHHHHHHHHhcCCeEEEEec-ccCChhHHHHHHHHHhhhccc
Q 025280          176 PLDEALIHVSLDLSGRPHLNYDLQIPTQRVGTYDTQLVEHFFQSLVNTSGMTLHIRQL-KRGSTTILILHGIHGLGMGFF  254 (255)
Q Consensus       176 PMDEALa~vavDlSGRpylv~~~~f~~~~iG~f~teLv~eFf~sfa~~a~~TLHI~~l-~G~N~HH~iEA~FKAlG~Al~  254 (255)
                      ||||||++|+|||||||||+|+++|+.++||+|++||++|||+||+++++|||||+++ ||+|+||++||+|||||+||-
T Consensus       160 PMDEALa~vavDlSGRpylv~~~~~~~~~iG~~~telv~hFf~s~a~~a~~tLHi~~l~~G~N~HH~~EA~FKAfgrALr  239 (261)
T PLN02800        160 PLDEALIEVVLDLSGRPYLGYNLEIPTERVGDLDTEMVEHFFQSLVNNSGMTVHIRQLAAGKNSHHIIEATAKAFGRALR  239 (261)
T ss_pred             cccceeEEEEEECCCCCceeecCCCCccccCCCchHHHHHHHHHHHhcCCCEEEEEecccCCcHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999999999999999988 999999999999999999984

>COG0131 HisB Imidazoleglycerol-phosphate dehydratase [Amino acid transport and metabolism] Back     alignment and domain information
>PRK13598 hisB imidazoleglycerol-phosphate dehydratase; Provisional Back     alignment and domain information
>PRK00951 hisB imidazoleglycerol-phosphate dehydratase; Validated Back     alignment and domain information
>cd07914 IGPD Imidazoleglycerol-phosphate dehydratase Back     alignment and domain information
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional Back     alignment and domain information
>PF00475 IGPD: Imidazoleglycerol-phosphate dehydratase; InterPro: IPR000807 Imidazoleglycerol-phosphate dehydratase is the enzyme that catalyses the seventh step in the biosynthesis of histidine in bacteria, fungi and plants Back     alignment and domain information
>KOG3143 consensus Imidazoleglycerol-phosphate dehydratase [Amino acid transport and metabolism] Back     alignment and domain information
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional Back     alignment and domain information
>PLN02800 imidazoleglycerol-phosphate dehydratase Back     alignment and domain information
>PRK13598 hisB imidazoleglycerol-phosphate dehydratase; Provisional Back     alignment and domain information
>cd07914 IGPD Imidazoleglycerol-phosphate dehydratase Back     alignment and domain information
>PRK00951 hisB imidazoleglycerol-phosphate dehydratase; Validated Back     alignment and domain information
>PF00475 IGPD: Imidazoleglycerol-phosphate dehydratase; InterPro: IPR000807 Imidazoleglycerol-phosphate dehydratase is the enzyme that catalyses the seventh step in the biosynthesis of histidine in bacteria, fungi and plants Back     alignment and domain information
>COG0131 HisB Imidazoleglycerol-phosphate dehydratase [Amino acid transport and metabolism] Back     alignment and domain information
>KOG3143 consensus Imidazoleglycerol-phosphate dehydratase [Amino acid transport and metabolism] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query255
2f1d_A207 X-Ray Structure Of Imidazoleglycerol-Phosphate Dehy 6e-83
1rhy_A202 Crystal Structure Of Imidazole Glycerol Phosphate D 3e-33
2ae8_A221 Crystal Structure Of Imidazoleglycerol-Phosphate De 2e-27
>pdb|2F1D|A Chain A, X-Ray Structure Of Imidazoleglycerol-Phosphate Dehydratase Length = 207 Back     alignment and structure 
Iteration: 1

 Score =  303 bits (776), Expect = 6e-83,   Method: Compositional matrix adjust.
 Identities = 145/163 (88%), Positives = 158/163 (96%)
Query: 71  ASTSSAVDSGRIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDV 130
           AS+SS++  GRIGEVKRVTKETNVSVKIN+DG+GVADSS+ IPFLDHMLDQLASHGLFDV
Sbjct: 1   ASSSSSMALGRIGEVKRVTKETNVSVKINLDGTGVADSSSGIPFLDHMLDQLASHGLFDV 60
Query: 131 HVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSG 190
           HVRATGD+HIDDHHTNED+ LAIGTALL+ALG+RKGINRFGDFTAPLDEALIHVSLDLSG
Sbjct: 61  HVRATGDVHIDDHHTNEDIALAIGTALLKALGERKGINRFGDFTAPLDEALIHVSLDLSG 120
Query: 191 RPHLNYDLQIPTQRVGTYDTQLVEHFFQSLVNTSGMTLHIRQL 233
           RP+L Y+L+IPTQRVGTYDTQLVEHFFQSLVNTSGMTLHIRQL
Sbjct: 121 RPYLGYNLEIPTQRVGTYDTQLVEHFFQSLVNTSGMTLHIRQL 163
>pdb|1RHY|A Chain A, Crystal Structure Of Imidazole Glycerol Phosphate Dehydratase Length = 202 Back     alignment and structure
>pdb|2AE8|A Chain A, Crystal Structure Of Imidazoleglycerol-Phosphate Dehydratase From Staphylococcus Aureus Subsp. Aureus N315 Length = 221 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query255
2f1d_A207 IGPD 1, imidazoleglycerol-phosphate dehydratase 1; 7e-91
2ae8_A221 IGPD, imidazoleglycerol-phosphate dehydratase; bet 1e-86
1rhy_A202 IGPD, imidazole glycerol phosphate dehydratase; de 2e-85
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-07
>2f1d_A IGPD 1, imidazoleglycerol-phosphate dehydratase 1; herbicide, manganese, histidine biosynthesis, lyase; 3.00A {Arabidopsis thaliana} SCOP: d.14.1.9 d.14.1.9 Length = 207 Back     alignment and structure
 Score =  266 bits (682), Expect = 7e-91
 Identities = 145/164 (88%), Positives = 158/164 (96%)

Query: 71  ASTSSAVDSGRIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDV 130
           AS+SS++  GRIGEVKRVTKETNVSVKIN+DG+GVADSS+ IPFLDHMLDQLASHGLFDV
Sbjct: 1   ASSSSSMALGRIGEVKRVTKETNVSVKINLDGTGVADSSSGIPFLDHMLDQLASHGLFDV 60

Query: 131 HVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSG 190
           HVRATGD+HIDDHHTNED+ LAIGTALL+ALG+RKGINRFGDFTAPLDEALIHVSLDLSG
Sbjct: 61  HVRATGDVHIDDHHTNEDIALAIGTALLKALGERKGINRFGDFTAPLDEALIHVSLDLSG 120

Query: 191 RPHLNYDLQIPTQRVGTYDTQLVEHFFQSLVNTSGMTLHIRQLK 234
           RP+L Y+L+IPTQRVGTYDTQLVEHFFQSLVNTSGMTLHIRQL 
Sbjct: 121 RPYLGYNLEIPTQRVGTYDTQLVEHFFQSLVNTSGMTLHIRQLA 164
>2ae8_A IGPD, imidazoleglycerol-phosphate dehydratase; beta-alpha-beta sandwich, duplication of A half-domain; 2.01A {Staphylococcus aureus subsp} SCOP: d.14.1.9 d.14.1.9 Length = 221 Back     alignment and structure
>1rhy_A IGPD, imidazole glycerol phosphate dehydratase; dehydratases, histidine biosynthesis, LEFT-handed B-A-B CROS motif, gene duplication; 2.30A {Filobasidiella neoformans} SCOP: d.14.1.9 d.14.1.9 Length = 202 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query255
1rhy_A202 IGPD, imidazole glycerol phosphate dehydratase; de 100.0
2f1d_A207 IGPD 1, imidazoleglycerol-phosphate dehydratase 1; 100.0
2ae8_A221 IGPD, imidazoleglycerol-phosphate dehydratase; bet 100.0
1rhy_A202 IGPD, imidazole glycerol phosphate dehydratase; de 97.34
2ae8_A221 IGPD, imidazoleglycerol-phosphate dehydratase; bet 97.32
2f1d_A207 IGPD 1, imidazoleglycerol-phosphate dehydratase 1; 97.27
>1rhy_A IGPD, imidazole glycerol phosphate dehydratase; dehydratases, histidine biosynthesis, LEFT-handed B-A-B CROS motif, gene duplication; 2.30A {Filobasidiella neoformans} SCOP: d.14.1.9 d.14.1.9 Back     alignment and structure
Probab=100.00  E-value=2.2e-90  Score=606.50  Aligned_cols=176  Identities=40%  Similarity=0.658  Sum_probs=167.3

Q ss_pred             CCCceEEEEeeeCCeEEEEEEEeCCCc-----eeeeecCCccHHHHHHHHHhhcCcceEEEEecCccccCCccchhhhhh
Q 025280           78 DSGRIGEVKRVTKETNVSVKINVDGSG-----VADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLA  152 (255)
Q Consensus        78 ~~~R~a~i~R~TkET~I~v~LnLDG~G-----~~~I~TGIgFlDHML~~~a~Hg~fdL~i~a~GDl~VD~HHtVEDvGI~  152 (255)
                      |+.|+++|+|+|+||+|+|+|||||+|     +++|+||||||||||+|||+||+|||+|+|+||++||+|||||||||+
T Consensus         1 ~~~R~a~v~R~T~ET~I~v~l~LDG~g~~~~~~~~i~TGigFlDHML~~la~Hg~~dL~v~a~GDl~iD~HHtvED~gI~   80 (202)
T 1rhy_A            1 MSERIASVERTTSETHISCTIDLDHIPGVTEQKINVSTGIGFLDHMFTALAKHGGMSLQLQCKGDLHIDDHHTAEDCALA   80 (202)
T ss_dssp             -CCCEEEEEEECSSCEEEEEEESCCCTTTCCCCEEEECSCHHHHHHHHHHHHHTTCEEEEEEESCC------CCHHHHHH
T ss_pred             CCceeEEEEecCCceEEEEEEEeCCCCCcccceeeeeCCCcHHHHHHHHHHHHcCCceEEEEecCCccccCccHHHhhhh
Confidence            356999999999999999999999999     999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhcCCccccceecceecccccceeEEEEEcCCCceeEEeccCCcceecccccccHHHHHHHHHHhcCCeEEEEe
Q 025280          153 IGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRPHLNYDLQIPTQRVGTYDTQLVEHFFQSLVNTSGMTLHIRQ  232 (255)
Q Consensus       153 LG~Al~~ALGdK~GI~RyG~a~vPMDEALa~vavDlSGRpylv~~~~f~~~~iG~f~teLv~eFf~sfa~~a~~TLHI~~  232 (255)
                      |||||+||||||+||+|||++++||||||++|+||||||||++|+++|++++||+|++||++|||+|||++++|||||++
T Consensus        81 LG~Al~~ALGdk~GI~RyG~a~vPMDEaL~~v~vDlSgRpylv~~~~~~~~~iG~~~tel~~~Ff~s~a~~a~~tLHi~~  160 (202)
T 1rhy_A           81 LGEAFKKALGERKGIKRYGYAYAPLDESLSRAVIDISSRPYFMCHLPFTREKVGDLSTEMVSHLLQSFAFAAGVTLHIDS  160 (202)
T ss_dssp             HHHHHHHHHTTCTTCCCEEEEEEEETTEEEEEEEECSSCCEEEEECCCCSSEETTEETHHHHHHHHHHHHHHTCEEEEEE
T ss_pred             HHHHHHHHhcCccccceeecccccccceeeEEEEEcCCCceEEEccCCCCcccCCCChHHHHHHHHHHHhhCCCeEEEEE
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccCChhHHHHHHHHHhhhcc
Q 025280          233 LKRGSTTILILHGIHGLGMGF  253 (255)
Q Consensus       233 l~G~N~HH~iEA~FKAlG~Al  253 (255)
                      +||+|+||++||+|||||+||
T Consensus       161 l~G~N~HH~~Ea~FKA~arAL  181 (202)
T 1rhy_A          161 IRGENNHHIAESAFKALALAI  181 (202)
T ss_dssp             EECSSHHHHHHHHHHHHHHHH
T ss_pred             EecCCcHHHHHHHHHHHHHHH
Confidence            999999999999999999997
>2f1d_A IGPD 1, imidazoleglycerol-phosphate dehydratase 1; herbicide, manganese, histidine biosynthesis, lyase; 3.00A {Arabidopsis thaliana} SCOP: d.14.1.9 d.14.1.9 Back     alignment and structure
>2ae8_A IGPD, imidazoleglycerol-phosphate dehydratase; beta-alpha-beta sandwich, duplication of A half-domain; 2.01A {Staphylococcus aureus subsp} SCOP: d.14.1.9 d.14.1.9 Back     alignment and structure
>1rhy_A IGPD, imidazole glycerol phosphate dehydratase; dehydratases, histidine biosynthesis, LEFT-handed B-A-B CROS motif, gene duplication; 2.30A {Filobasidiella neoformans} SCOP: d.14.1.9 d.14.1.9 Back     alignment and structure
>2ae8_A IGPD, imidazoleglycerol-phosphate dehydratase; beta-alpha-beta sandwich, duplication of A half-domain; 2.01A {Staphylococcus aureus subsp} SCOP: d.14.1.9 d.14.1.9 Back     alignment and structure
>2f1d_A IGPD 1, imidazoleglycerol-phosphate dehydratase 1; herbicide, manganese, histidine biosynthesis, lyase; 3.00A {Arabidopsis thaliana} SCOP: d.14.1.9 d.14.1.9 Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 255
d2f1da186 d.14.1.9 (A:10-95) Imidazole glycerol phosphate de 3e-37
d2ae8a184 d.14.1.9 (A:1-84) Imidazole glycerol phosphate deh 4e-33
d1rhya192 d.14.1.9 (A:2-93) Imidazole glycerol phosphate deh 1e-32
d2f1da297 d.14.1.9 (A:96-192) Imidazole glycerol phosphate d 3e-25
d1rhya294 d.14.1.9 (A:94-187) Imidazole glycerol phosphate d 8e-24
d2ae8a295 d.14.1.9 (A:85-179) Imidazole glycerol phosphate d 2e-22
>d2f1da1 d.14.1.9 (A:10-95) Imidazole glycerol phosphate dehydratase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 86 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: Ribosomal protein S5 domain 2-like
superfamily: Ribosomal protein S5 domain 2-like
family: Imidazole glycerol phosphate dehydratase
domain: Imidazole glycerol phosphate dehydratase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  124 bits (313), Expect = 3e-37
 Identities = 77/86 (89%), Positives = 84/86 (97%)

Query: 80  GRIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIH 139
           GRIGEVKRVTKETNVSVKIN+DG+GVADSS+ IPFLDHMLDQLASHGLFDVHVRATGD+H
Sbjct: 1   GRIGEVKRVTKETNVSVKINLDGTGVADSSSGIPFLDHMLDQLASHGLFDVHVRATGDVH 60

Query: 140 IDDHHTNEDVGLAIGTALLQALGDRK 165
           IDDHHTNED+ LAIGTALL+ALG+RK
Sbjct: 61  IDDHHTNEDIALAIGTALLKALGERK 86
>d2ae8a1 d.14.1.9 (A:1-84) Imidazole glycerol phosphate dehydratase {Staphylococcus aureus [TaxId: 1280]} Length = 84 Back     information, alignment and structure
>d1rhya1 d.14.1.9 (A:2-93) Imidazole glycerol phosphate dehydratase {Fungus (Filobasidiella neoformans) [TaxId: 5207]} Length = 92 Back     information, alignment and structure
>d2f1da2 d.14.1.9 (A:96-192) Imidazole glycerol phosphate dehydratase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 97 Back     information, alignment and structure
>d1rhya2 d.14.1.9 (A:94-187) Imidazole glycerol phosphate dehydratase {Fungus (Filobasidiella neoformans) [TaxId: 5207]} Length = 94 Back     information, alignment and structure
>d2ae8a2 d.14.1.9 (A:85-179) Imidazole glycerol phosphate dehydratase {Staphylococcus aureus [TaxId: 1280]} Length = 95 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query255
d2f1da186 Imidazole glycerol phosphate dehydratase {Thale cr 100.0
d1rhya192 Imidazole glycerol phosphate dehydratase {Fungus ( 100.0
d2f1da297 Imidazole glycerol phosphate dehydratase {Thale cr 100.0
d1rhya294 Imidazole glycerol phosphate dehydratase {Fungus ( 100.0
d2ae8a295 Imidazole glycerol phosphate dehydratase {Staphylo 100.0
d2ae8a184 Imidazole glycerol phosphate dehydratase {Staphylo 100.0
d1rhya294 Imidazole glycerol phosphate dehydratase {Fungus ( 98.21
d2ae8a295 Imidazole glycerol phosphate dehydratase {Staphylo 97.99
d2f1da297 Imidazole glycerol phosphate dehydratase {Thale cr 97.88
d2f1da186 Imidazole glycerol phosphate dehydratase {Thale cr 95.38
d1rhya192 Imidazole glycerol phosphate dehydratase {Fungus ( 92.41
d2ae8a184 Imidazole glycerol phosphate dehydratase {Staphylo 91.62
>d2f1da1 d.14.1.9 (A:10-95) Imidazole glycerol phosphate dehydratase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: Ribosomal protein S5 domain 2-like
superfamily: Ribosomal protein S5 domain 2-like
family: Imidazole glycerol phosphate dehydratase
domain: Imidazole glycerol phosphate dehydratase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=4.7e-46  Score=287.49  Aligned_cols=86  Identities=90%  Similarity=1.311  Sum_probs=84.7

Q ss_pred             CceEEEEeeeCCeEEEEEEEeCCCceeeeecCCccHHHHHHHHHhhcCcceEEEEecCccccCCccchhhhhhHHHHHHH
Q 025280           80 GRIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQ  159 (255)
Q Consensus        80 ~R~a~i~R~TkET~I~v~LnLDG~G~~~I~TGIgFlDHML~~~a~Hg~fdL~i~a~GDl~VD~HHtVEDvGI~LG~Al~~  159 (255)
                      .|+++++|+|+||+|+|+|||||+|+++|+||||||||||+||++||+|||+|+|+||++||+||||||+||+|||||+|
T Consensus         1 gR~a~v~R~TkET~I~v~l~lDG~g~~~i~TGi~FldHML~~~a~h~~~dl~i~a~GDl~vD~HHtvED~gI~LG~al~~   80 (86)
T d2f1da1           1 GRIGEVKRVTKETNVSVKINLDGTGVADSSSGIPFLDHMLDQLASHGLFDVHVRATGDVHIDDHHTNEDIALAIGTALLK   80 (86)
T ss_dssp             CCEEEEEEECSSCEEEEEEETTCCCCEEEECSCHHHHHHHHHHHHHHTCEEEEEEECCTTTCSHHHHHHHHHHHHHHHHH
T ss_pred             CCcEEEEEecCceEEEEEEEeCCCCccccccCchHHHHHHHHHHHhCCCeEEEEEEeccccCcchhhHHHHHHHHHHHHH
Confidence            49999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hcCCcc
Q 025280          160 ALGDRK  165 (255)
Q Consensus       160 ALGdK~  165 (255)
                      |||||+
T Consensus        81 ALGdkk   86 (86)
T d2f1da1          81 ALGERK   86 (86)
T ss_dssp             HHTTCC
T ss_pred             HhcCCC
Confidence            999986
>d1rhya1 d.14.1.9 (A:2-93) Imidazole glycerol phosphate dehydratase {Fungus (Filobasidiella neoformans) [TaxId: 5207]} Back     information, alignment and structure
>d2f1da2 d.14.1.9 (A:96-192) Imidazole glycerol phosphate dehydratase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d1rhya2 d.14.1.9 (A:94-187) Imidazole glycerol phosphate dehydratase {Fungus (Filobasidiella neoformans) [TaxId: 5207]} Back     information, alignment and structure
>d2ae8a2 d.14.1.9 (A:85-179) Imidazole glycerol phosphate dehydratase {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d2ae8a1 d.14.1.9 (A:1-84) Imidazole glycerol phosphate dehydratase {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d1rhya2 d.14.1.9 (A:94-187) Imidazole glycerol phosphate dehydratase {Fungus (Filobasidiella neoformans) [TaxId: 5207]} Back     information, alignment and structure
>d2ae8a2 d.14.1.9 (A:85-179) Imidazole glycerol phosphate dehydratase {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d2f1da2 d.14.1.9 (A:96-192) Imidazole glycerol phosphate dehydratase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d2f1da1 d.14.1.9 (A:10-95) Imidazole glycerol phosphate dehydratase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d1rhya1 d.14.1.9 (A:2-93) Imidazole glycerol phosphate dehydratase {Fungus (Filobasidiella neoformans) [TaxId: 5207]} Back     information, alignment and structure
>d2ae8a1 d.14.1.9 (A:1-84) Imidazole glycerol phosphate dehydratase {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure