Citrus Sinensis ID: 025301

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-----
Protein Sequence
MDSLYDLELISETVPVILDNSKIWYHVLMTSMKLGARGVAHVEGVSRVNLNDNRRYSNLLLINRTASPLSWFMECKDRKNHSALMLPHSFLPSMAAEKLRDAADKIKALLVDYDSIHVRRGDRLKTRKDRYGVDRSLFPHLDRDTRPEAILCRIKNWVPPGRTLFIASNERTPGFFSPLAVRYNLAYSSNFSDILDLVVENNYQLFMVERLILMGARTFIKTYKEDDNDLSLTDDPKKNTKNWQIPVYTMEDQEC
Secondary Structure (PSIPRED)
ccccccHHHHcccccccccccHHHHHHHHHHcccccccEEEEcccccccccccccHHHHHHHHccccccccEEEEccccccEEEEcccccccccHHHHHHHHHHHHHHHcccccEEEEEEccccccccccccccccccccccccccHHHHHHHHHcccccccEEEEEccccccccccccccccEEEEcccHHHHHccccccHHHHHHHHHHHHHccccEEEEccccccccccccccccccccccccEEEcccccc
Secondary Structure Prediction (SSPRO)
cccHccHHHHHccccEEEcccHHHHHHHHHHcccccccEEEEEcccHHEccccccccEEEEEEccccccHHHHHccccccccEEEccccHccccHHHHHHHHHHHHHHHHccccEEEEEEccHHcccccccccEEcccccccccccHHHHHHHHHHHcccccEEEEEccccccccccHHHHHcEEEEcccHHHHcccccccccEEEEEEHHHHHcccEEEEHHccccccccccccccccccccEEEEEccccccc
Coil and Loop (DISEMBL)
mdslydlelisetvpvildnsKIWYHVLMTSMKLGARGVAHVEGVsrvnlndnrrySNLLLINrtasplswfmeckdrknhsalmlphsflpsMAAEKLRDAADKIKALLVDYdsihvrrgdrlktrkdrygvdrslfphldrdtrpeAILCRiknwvppgrtlfiasnertpgffspLAVRYNlayssnfsDILDLVVENNYQLFMVERLILMGARTFIKtykeddndlsltddpkkntknwqipvytmedqec
Flexible Loop (DISEMBL)
MDSLYDLELISETVPVILDNSKIWYHVLMTSMKLGARGVAHVEgvsrvnlndnrrysnLLLINRTASPLSWFMECKDRKNHSALMLPHSFLPSMAAEKLRDAADKIKALlvdydsihvrrgdrlktrkdrygvdrslfphldrdtrpeAILCriknwvppGRTLFIASNERTPGFFSPLAVRYNLAYSSNFSDILDLVVENNYQLFMVERLILMGARTFIKTykeddndlsltddpkkntknwqipvytmedqec
Low Complexity Region (SEG)
MDSLYDLELISETVPVILDNSKIWYHVLMTSMKLGARGVAHVEGVSRVNLNDNRRYSNLLLINRTASPLSWFMECKDRKNHSALMLPHSFLPSMAAEKLRDAADKIKALLVDYDSIHVRRGDRLKTRKDRYGVDRSLFPHLDRDTRPEAILCRIKNWVPPGRTLFIASNERTPGFFSPLAVRYNLAYSSNFSDILDLVVENNYQLFMVERLILMGARTFIKTYKEDDNDLSLTDDPKKNTKNWQIPVYTMEDQEC
Disordered region (IsUnstruct)
***LYDLELISETVPVILDNSKIWYHVLMTSMKLGARGVAHVEGVSRVNLNDNRRYSNLLLINRTASPLSWFMECKDRKNHSALMLPHSFLPSMAAEKLRDAADKIKALLVDYDSIHVRRGDRLKTRKDRYGVDRSLFPHLDRDTRPEAILCRIKNWVPPGRTLFIASNERTPGFFSPLAVRYNLAYSSNFSDILDLVVENNYQLFMVERLILMGARTFIKTYK*******************************
Disordered Region (DISOPRED)
*DSLYDLELISETVPVILDNSKIWYHVLMTSMKLGARGVAHVEGVSRVNLNDNRRYSNLLLINRTASPLSWFMECKDRKNHSALMLPHSFLPSMAAEKLRDAADKIKALLVDYDSIHVRRGDRLKTRKDRYGVDRSLFPHLDRDTRPEAILCRIKNWVPPGRTLFIASNERTPGFFSPLAVRYNLAYSSNFSDILDLVVENNYQLFMVERLILMGARTFIKTYKEDDNDLSLTDDPKKNTKNWQIPVYTM*****
Disordered Region (DISEMBL)
MDSLYDLELISETVPVILDNSKIWYHVLMTSMKLGARGVAHVEGVSRVNLNDNRRYSNLLLINRTASPLSWFMECKDRKNHSALMLPHSFLPSMAAEKLRDAADKIKALLVDYDSIHVRRGDRLKTRKDRYGVDRSLFPHLDRDTRPEAILCRIKNWVPPGRTLFIASNERTPGFFSPLAVRYNLAYSSNFSDILDLVVENNYQLFMVERLILMGARTFIKTYKEDDNDLSLTDDPKKNTKNWQIPVYTMEDQEC
Disordered Region (DISPRO)
*DSLYDLELISETVPVILDNSKIWYHVLMTSMKLGARGVAHVEGVSRVNLNDNRRYSNLLLINRTASPLSWFMECKDRKNHSALMLPHSFLPSMAAEKLRDAADKIKALLVDYDSIHVRRGDRLKTRKDRYGVDRSLFPHLDRDTRPEAILCRIKNWVPPGRTLFIASNERTPGFFSPLAVRYNLAYSSNFSDILDLVVENNYQLFMVERLILMGARTFIKTYKEDDNDLSLTDDPKKNTKNWQIPVYTME****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MDSLYDLELISETVPVILDNSKIWYHVLMTSMKLGARGVAHVEGVSRVNLNDNRRYSNLLLINRTASPLSWFMECKDRKNHSALMLPHSFLPSMAAEKLRDAADKIKALLVDYDSIHVRRGDRLKTRKDRYGVDRSLFPHLDRDTRPEAILCRIKNWVPPGRTLFIASNERTPGFFSPLAVRYNLAYSSNFSDILDLVVENNYQLFMVERLILMGARTFIKTYKEDDNDLSLTDDPKKNTKNWQIPVYTMEDQEC
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	255
356502952	490	PREDICTED: uncharacterized protein LOC10	0.996	0.518	0.8	1e-118
356532437	385	PREDICTED: uncharacterized protein LOC10	0.996	0.659	0.8	1e-117
225440083	398	PREDICTED: uncharacterized protein LOC10	0.992	0.635	0.798	1e-116
255562306	405	conserved hypothetical protein [Ricinus	0.988	0.622	0.809	1e-112
449488232	407	PREDICTED: uncharacterized LOC101219097	0.992	0.621	0.790	1e-109
449453169	407	PREDICTED: uncharacterized protein LOC10	0.992	0.621	0.790	1e-109
297820444	403	hypothetical protein ARALYDRAFT_486114 [	0.988	0.625	0.724	1e-105
15229000	403	uncharacterized protein [Arabidopsis tha	0.984	0.622	0.727	1e-105
297824059	405	hypothetical protein ARALYDRAFT_483184 [	0.980	0.617	0.709	1e-103
145360865	404	uncharacterized protein [Arabidopsis tha	0.984	0.621	0.706	1e-102

>gi|356502952|ref|XP_003520278.1| PREDICTED: uncharacterized protein LOC100814636 [Glycine max]

 Score =  429 bits (1104), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 204/255 (80%), Positives = 228/255 (89%), Gaps = 1/255 (0%)

Query: 1   MDSLYDLELISETVPVILDNSKIWYHVLMTSMKLGARGVAHVEGVSRVNLNDNRRYSNLL 60
           MDSLYD EL+S+TVPVILDNSK WY VL TSMKLGARGVAHVEGVSR  L +N RYS+LL
Sbjct: 237 MDSLYDTELMSDTVPVILDNSKEWYRVLSTSMKLGARGVAHVEGVSRFELKENSRYSDLL 296

Query: 61  LINRTASPLSWFMECKDRKNHSALMLPHSFLPSMAAEKLRDAADKIKALLVDYDSIHVRR 120
           LINRTASPLSWFMECKDR N SA+MLP+SFLPSMAA KLRDAA+KIKALL DYD+IHVRR
Sbjct: 297 LINRTASPLSWFMECKDRNNRSAIMLPYSFLPSMAAGKLRDAAEKIKALLGDYDAIHVRR 356

Query: 121 GDRLKTRKDRYGVDRSLFPHLDRDTRPEAILCRIKNWVPPGRTLFIASNERTPGFFSPLA 180
           GD++KTRKDR+GV RSL PHLDRDTRPE +LCRI  WVPPGRTLFIASNERTPGFFSPL+
Sbjct: 357 GDKIKTRKDRFGVARSLHPHLDRDTRPEFMLCRIAKWVPPGRTLFIASNERTPGFFSPLS 416

Query: 181 VRYNLAYSSNFSDILDLVVENNYQLFMVERLILMGARTFIKTYKEDDNDLSLTDDPKKNT 240
            RY LAYSSN+S ILD ++ENNYQLFM+ERLI+MG +TFI+T+KED+ DLSLTDDPKKNT
Sbjct: 417 ARYRLAYSSNYSHILDPLIENNYQLFMIERLIMMGGKTFIRTFKEDETDLSLTDDPKKNT 476

Query: 241 KNWQIPVYTMEDQEC 255
           K WQIPVY + D+ C
Sbjct: 477 KLWQIPVYNV-DETC 490

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356532437|ref|XP_003534779.1| PREDICTED: uncharacterized protein LOC100796131 [Glycine max]

 Score =  427 bits (1098), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 204/255 (80%), Positives = 228/255 (89%), Gaps = 1/255 (0%)

Query: 1   MDSLYDLELISETVPVILDNSKIWYHVLMTSMKLGARGVAHVEGVSRVNLNDNRRYSNLL 60
           MDSLYD EL+S+TVPVILDNSK WY VL TSMKLGARGVAHV GVSR  L +N RYS+LL
Sbjct: 132 MDSLYDTELMSDTVPVILDNSKEWYRVLSTSMKLGARGVAHVGGVSRFELKENSRYSDLL 191

Query: 61  LINRTASPLSWFMECKDRKNHSALMLPHSFLPSMAAEKLRDAADKIKALLVDYDSIHVRR 120
           LINRTASPLSWFMECKDR N SA+MLP+SFLPSMAA KLRDAA+KIKALL DYD+IHVRR
Sbjct: 192 LINRTASPLSWFMECKDRNNGSAIMLPYSFLPSMAAGKLRDAAEKIKALLGDYDAIHVRR 251

Query: 121 GDRLKTRKDRYGVDRSLFPHLDRDTRPEAILCRIKNWVPPGRTLFIASNERTPGFFSPLA 180
           GD++KTRKDR+GV RSL PHLDRDTRPE +LCRI  WVPPGRTLFIASNERTPGFFSPL+
Sbjct: 252 GDKIKTRKDRFGVVRSLHPHLDRDTRPEFMLCRIAKWVPPGRTLFIASNERTPGFFSPLS 311

Query: 181 VRYNLAYSSNFSDILDLVVENNYQLFMVERLILMGARTFIKTYKEDDNDLSLTDDPKKNT 240
            RY LAYSSN+S ILD ++ENNYQLFM+ERLI+MGA+TFI+T+KED+ DLSLTDDPKKNT
Sbjct: 312 ARYRLAYSSNYSHILDPLIENNYQLFMIERLIMMGAKTFIRTFKEDETDLSLTDDPKKNT 371

Query: 241 KNWQIPVYTMEDQEC 255
           K WQIPVY + D+ C
Sbjct: 372 KLWQIPVYNV-DETC 385

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225440083|ref|XP_002282555.1| PREDICTED: uncharacterized protein LOC100251727 [Vitis vinifera] gi|297741651|emb|CBI32783.3| unnamed protein product [Vitis vinifera]

 Score =  424 bits (1090), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 202/253 (79%), Positives = 227/253 (89%)

Query: 1   MDSLYDLELISETVPVILDNSKIWYHVLMTSMKLGARGVAHVEGVSRVNLNDNRRYSNLL 60
           MDSLYDL+L+S TVPVILDNSK+WY VL TSMKLGARGVAHV GVSR+ L DN  YSNLL
Sbjct: 144 MDSLYDLDLMSNTVPVILDNSKMWYRVLSTSMKLGARGVAHVAGVSRIALRDNSHYSNLL 203

Query: 61  LINRTASPLSWFMECKDRKNHSALMLPHSFLPSMAAEKLRDAADKIKALLVDYDSIHVRR 120
           LINRTASPLSWFMECKDR N SA+MLP+SFLPSMAA+KLRDAA KIK LL DYD++HVRR
Sbjct: 204 LINRTASPLSWFMECKDRNNRSAIMLPYSFLPSMAAKKLRDAAGKIKVLLGDYDAMHVRR 263

Query: 121 GDRLKTRKDRYGVDRSLFPHLDRDTRPEAILCRIKNWVPPGRTLFIASNERTPGFFSPLA 180
           GD++KTRKDR+GVDR+L PHLDRDTRPE IL RI+ WVPPGRTLFIASNERTPGFFSPL+
Sbjct: 264 GDKIKTRKDRFGVDRTLHPHLDRDTRPEFILRRIEKWVPPGRTLFIASNERTPGFFSPLS 323

Query: 181 VRYNLAYSSNFSDILDLVVENNYQLFMVERLILMGARTFIKTYKEDDNDLSLTDDPKKNT 240
            RY LAYSSN+S ILD +VENNYQLFM+ERLILMGA+T+I+T+KED+  LSLTDDPKKNT
Sbjct: 324 ARYRLAYSSNYSKILDPLVENNYQLFMIERLILMGAKTYIRTFKEDETYLSLTDDPKKNT 383

Query: 241 KNWQIPVYTMEDQ 253
           K WQIPVYT + +
Sbjct: 384 KAWQIPVYTSDGE 396

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255562306|ref|XP_002522160.1| conserved hypothetical protein [Ricinus communis] gi|223538598|gb|EEF40201.1| conserved hypothetical protein [Ricinus communis]

 Score =  410 bits (1054), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 204/252 (80%), Positives = 231/252 (91%)

Query: 1   MDSLYDLELISETVPVILDNSKIWYHVLMTSMKLGARGVAHVEGVSRVNLNDNRRYSNLL 60
           MDSLYD++LISET+PVILDNSKIWY VL TSMKLG RG+AHVEGVSRV+L +N  YSNLL
Sbjct: 151 MDSLYDIDLISETIPVILDNSKIWYQVLSTSMKLGDRGIAHVEGVSRVDLKENSGYSNLL 210

Query: 61  LINRTASPLSWFMECKDRKNHSALMLPHSFLPSMAAEKLRDAADKIKALLVDYDSIHVRR 120
           LINRTASPLSWFMECKDR N SA++LP+SFLPSMAAEKLRDAADKIK LL DYD+IHVRR
Sbjct: 211 LINRTASPLSWFMECKDRNNRSAILLPYSFLPSMAAEKLRDAADKIKTLLGDYDAIHVRR 270

Query: 121 GDRLKTRKDRYGVDRSLFPHLDRDTRPEAILCRIKNWVPPGRTLFIASNERTPGFFSPLA 180
           GD++KTRKDR+GV RSL PHLDRDTRP+ +L RI+ WVPPGRTLFIASNE+TPGFFSPL+
Sbjct: 271 GDKIKTRKDRFGVARSLHPHLDRDTRPDFMLLRIEKWVPPGRTLFIASNEKTPGFFSPLS 330

Query: 181 VRYNLAYSSNFSDILDLVVENNYQLFMVERLILMGARTFIKTYKEDDNDLSLTDDPKKNT 240
           VRY LAYS N+S ILD ++ENNYQLFM+ERLI+MGARTFI+T+KEDD DLSLTDDPKKNT
Sbjct: 331 VRYKLAYSLNYSWILDPLIENNYQLFMIERLIMMGARTFIRTFKEDDTDLSLTDDPKKNT 390

Query: 241 KNWQIPVYTMED 252
           K WQIPVYTM++
Sbjct: 391 KKWQIPVYTMDE 402

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449488232|ref|XP_004157975.1| PREDICTED: uncharacterized LOC101219097 [Cucumis sativus]

 Score =  400 bits (1027), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 200/253 (79%), Positives = 223/253 (88%)

Query: 1   MDSLYDLELISETVPVILDNSKIWYHVLMTSMKLGARGVAHVEGVSRVNLNDNRRYSNLL 60
           MDSLYD++LIS+TVPVILDNSK WY VL T MKLGAR V HVE VSR+ L D+ RYSNLL
Sbjct: 154 MDSLYDMDLISDTVPVILDNSKSWYQVLSTGMKLGARAVGHVEKVSRIELRDSSRYSNLL 213

Query: 61  LINRTASPLSWFMECKDRKNHSALMLPHSFLPSMAAEKLRDAADKIKALLVDYDSIHVRR 120
           LINRTASPLSWFMECKDR NHSA+MLP+ FLPSMAAE LRDAA+KIK LL DYD+IHVRR
Sbjct: 214 LINRTASPLSWFMECKDRNNHSAVMLPYKFLPSMAAENLRDAAEKIKGLLGDYDAIHVRR 273

Query: 121 GDRLKTRKDRYGVDRSLFPHLDRDTRPEAILCRIKNWVPPGRTLFIASNERTPGFFSPLA 180
           GD++KTRKDR+GVDRSL PHLDRDTRPE +L RI  WVP GRTLFIASNER PGFFSPL+
Sbjct: 274 GDKIKTRKDRFGVDRSLHPHLDRDTRPEFMLKRIAKWVPAGRTLFIASNERIPGFFSPLS 333

Query: 181 VRYNLAYSSNFSDILDLVVENNYQLFMVERLILMGARTFIKTYKEDDNDLSLTDDPKKNT 240
            RY LAYSSN+SDILD VV+NNYQLFM+ERLI+ GA+T I+T+KEDD DLSLTDDPKKNT
Sbjct: 334 ARYKLAYSSNYSDILDPVVQNNYQLFMIERLIMAGAKTLIRTFKEDDTDLSLTDDPKKNT 393

Query: 241 KNWQIPVYTMEDQ 253
           K WQIPVYT E++
Sbjct: 394 KAWQIPVYTDEER 406

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449453169|ref|XP_004144331.1| PREDICTED: uncharacterized protein LOC101219097 [Cucumis sativus]

 Score =  400 bits (1027), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 200/253 (79%), Positives = 223/253 (88%)

Query: 1   MDSLYDLELISETVPVILDNSKIWYHVLMTSMKLGARGVAHVEGVSRVNLNDNRRYSNLL 60
           MDSLYD++LIS+TVPVILDNSK WY VL T MKLGAR V HVE VSR+ L D+ RYSNLL
Sbjct: 154 MDSLYDMDLISDTVPVILDNSKSWYQVLSTGMKLGARAVGHVEKVSRIELRDSSRYSNLL 213

Query: 61  LINRTASPLSWFMECKDRKNHSALMLPHSFLPSMAAEKLRDAADKIKALLVDYDSIHVRR 120
           LINRTASPLSWFMECKDR NHSA+MLP+ FLPSMAAE LRDAA+KIK LL DYD+IHVRR
Sbjct: 214 LINRTASPLSWFMECKDRNNHSAVMLPYKFLPSMAAENLRDAAEKIKGLLGDYDAIHVRR 273

Query: 121 GDRLKTRKDRYGVDRSLFPHLDRDTRPEAILCRIKNWVPPGRTLFIASNERTPGFFSPLA 180
           GD++KTRKDR+GVDRSL PHLDRDTRPE +L RI  WVP GRTLFIASNER PGFFSPL+
Sbjct: 274 GDKIKTRKDRFGVDRSLHPHLDRDTRPEFMLKRIAKWVPAGRTLFIASNERIPGFFSPLS 333

Query: 181 VRYNLAYSSNFSDILDLVVENNYQLFMVERLILMGARTFIKTYKEDDNDLSLTDDPKKNT 240
            RY LAYSSN+SDILD VV+NNYQLFM+ERLI+ GA+T I+T+KEDD DLSLTDDPKKNT
Sbjct: 334 ARYKLAYSSNYSDILDPVVQNNYQLFMIERLIMAGAKTLIRTFKEDDTDLSLTDDPKKNT 393

Query: 241 KNWQIPVYTMEDQ 253
           K WQIPVYT E++
Sbjct: 394 KAWQIPVYTDEER 406

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297820444|ref|XP_002878105.1| hypothetical protein ARALYDRAFT_486114 [Arabidopsis lyrata subsp. lyrata] gi|297323943|gb|EFH54364.1| hypothetical protein ARALYDRAFT_486114 [Arabidopsis lyrata subsp. lyrata]

 Score =  386 bits (991), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 184/254 (72%), Positives = 223/254 (87%), Gaps = 2/254 (0%)

Query: 1   MDSLYDLELISETVPVILDNSKIWYHVLMTSMKLGARGVAHVEGVSRVNLNDNRRYSNLL 60
           MDSLYD++LISE +PVILD+SK W+ VL TSMKLG RG+AHV GVSR  L ++  YSNLL
Sbjct: 148 MDSLYDIDLISEKIPVILDDSKTWHIVLSTSMKLGERGIAHVSGVSRHRLKESH-YSNLL 206

Query: 61  LINRTASPLSWFMECKDRKNHSALMLPHSFLPSMAAEKLRDAADKIKALLVDYDSIHVRR 120
           +INRTASPL+WF+ECKDR N SA+MLP+SFLP+MAA KLR+AA+KIKA L DYD+IHVRR
Sbjct: 207 IINRTASPLAWFVECKDRSNRSAVMLPYSFLPNMAAAKLRNAAEKIKAQLGDYDAIHVRR 266

Query: 121 GDRLKTRKDRYGVDRSLFPHLDRDTRPEAILCRIKNWVPPGRTLFIASNERTPGFFSPLA 180
           GD+LKTRKDR+GV+R  FPHLDRDTRPE IL RI+  +P GRTLFI SNER PGFFSPLA
Sbjct: 267 GDKLKTRKDRFGVERIQFPHLDRDTRPEFILRRIEKRIPRGRTLFIGSNERKPGFFSPLA 326

Query: 181 VRYNLAYSSNFSDILDLVVENNYQLFMVERLILMGARTFIKTYKEDDNDLSLTDDPKKNT 240
           +RY LAYSSNFS+ILD ++ENNYQLFM+ERL++MGA+T+ KT+KE + DL+LTDDPKKN 
Sbjct: 327 IRYKLAYSSNFSEILDPIIENNYQLFMMERLVMMGAKTYFKTFKEYETDLTLTDDPKKN- 385

Query: 241 KNWQIPVYTMEDQE 254
           KNW+IPVYTM++++
Sbjct: 386 KNWEIPVYTMDERK 399

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15229000|ref|NP_191234.1| uncharacterized protein [Arabidopsis thaliana] gi|9662994|emb|CAC00738.1| putative protein [Arabidopsis thaliana] gi|16648897|gb|AAL24300.1| putative protein [Arabidopsis thaliana] gi|20453219|gb|AAM19848.1| AT3g56750/T8M16_80 [Arabidopsis thaliana] gi|23197686|gb|AAN15370.1| putative protein [Arabidopsis thaliana] gi|332646040|gb|AEE79561.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  386 bits (991), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 184/253 (72%), Positives = 222/253 (87%), Gaps = 2/253 (0%)

Query: 1   MDSLYDLELISETVPVILDNSKIWYHVLMTSMKLGARGVAHVEGVSRVNLNDNRRYSNLL 60
           MDSLYD++LISE +PVILD+SK W+ VL TSMKLG RG+AHV GV+R  L ++  YSNLL
Sbjct: 148 MDSLYDIDLISEKIPVILDDSKTWHIVLSTSMKLGERGIAHVSGVTRHRLKESH-YSNLL 206

Query: 61  LINRTASPLSWFMECKDRKNHSALMLPHSFLPSMAAEKLRDAADKIKALLVDYDSIHVRR 120
           +INRTASPL+WF+ECKDR N SA+MLP+SFLP+MAA KLR+AA+KIKA L DYD+IHVRR
Sbjct: 207 IINRTASPLAWFVECKDRSNRSAVMLPYSFLPNMAAAKLRNAAEKIKAQLGDYDAIHVRR 266

Query: 121 GDRLKTRKDRYGVDRSLFPHLDRDTRPEAILCRIKNWVPPGRTLFIASNERTPGFFSPLA 180
           GD+LKTRKDR+GV+R  FPHLDRDTRPE IL RI+  +P GRTLFI SNER PGFFSPLA
Sbjct: 267 GDKLKTRKDRFGVERIQFPHLDRDTRPEFILRRIEKRIPRGRTLFIGSNERKPGFFSPLA 326

Query: 181 VRYNLAYSSNFSDILDLVVENNYQLFMVERLILMGARTFIKTYKEDDNDLSLTDDPKKNT 240
           VRY LAYSSNFS+ILD ++ENNYQLFM+ERL++MGA+T+ KT+KE + DL+LTDDPKKN 
Sbjct: 327 VRYKLAYSSNFSEILDPIIENNYQLFMMERLVMMGAKTYFKTFKEYETDLTLTDDPKKN- 385

Query: 241 KNWQIPVYTMEDQ 253
           KNW+IPVYTM+++
Sbjct: 386 KNWEIPVYTMDER 398

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297824059|ref|XP_002879912.1| hypothetical protein ARALYDRAFT_483184 [Arabidopsis lyrata subsp. lyrata] gi|297325751|gb|EFH56171.1| hypothetical protein ARALYDRAFT_483184 [Arabidopsis lyrata subsp. lyrata]

 Score =  379 bits (974), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 178/251 (70%), Positives = 218/251 (86%), Gaps = 1/251 (0%)

Query: 1   MDSLYDLELISETVPVILDNSKIWYHVLMTSMKLGARGVAHVEGVSRVNLNDNRRYSNLL 60
           M+SLYD++LISE +PVILD+S+ W+ VL TSMKL  RG AHV G +R  LN++  ++NLL
Sbjct: 149 MESLYDIDLISEKIPVILDDSETWHIVLSTSMKLKERGSAHVYGANRNELNNSSHFTNLL 208

Query: 61  LINRTASPLSWFMECKDRKNHSALMLPHSFLPSMAAEKLRDAADKIKALLVDYDSIHVRR 120
           LINRTASPL+WF+ECKDR N S +MLP+SFLP+MAA +LRDAA+KIKA L  YD+IHVRR
Sbjct: 209 LINRTASPLAWFVECKDRGNRSDVMLPYSFLPNMAASRLRDAAEKIKAQLGVYDAIHVRR 268

Query: 121 GDRLKTRKDRYGVDRSLFPHLDRDTRPEAILCRIKNWVPPGRTLFIASNERTPGFFSPLA 180
           GD+LKTRKDR+ V+R+ FPHLDRDTRPE I+ RI+  +PPGRTLFI SNERTPGFFSPLA
Sbjct: 269 GDKLKTRKDRFRVERTQFPHLDRDTRPEFIIGRIQKQIPPGRTLFIGSNERTPGFFSPLA 328

Query: 181 VRYNLAYSSNFSDILDLVVENNYQLFMVERLILMGARTFIKTYKEDDNDLSLTDDPKKNT 240
           +RY +AYSSNFS+ILD ++ENNYQLFMVERLI+MGA+TF KT++E + DL+LTDDPKKN 
Sbjct: 329 IRYKVAYSSNFSEILDPIIENNYQLFMVERLIMMGAKTFFKTFREYETDLTLTDDPKKN- 387

Query: 241 KNWQIPVYTME 251
           KNW+IPVYTM+
Sbjct: 388 KNWEIPVYTMD 398

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|145360865|ref|NP_181648.2| uncharacterized protein [Arabidopsis thaliana] gi|330254844|gb|AEC09938.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  377 bits (969), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 178/252 (70%), Positives = 218/252 (86%), Gaps = 1/252 (0%)

Query: 1   MDSLYDLELISETVPVILDNSKIWYHVLMTSMKLGARGVAHVEGVSRVNLNDNRRYSNLL 60
           M+SLYD++LISE +PVILD+S+ W+ +L TSMKL  RG AHV G +R  LND+  ++NLL
Sbjct: 148 MESLYDIDLISEKIPVILDDSETWHIMLSTSMKLKERGSAHVYGANRHELNDSSDFTNLL 207

Query: 61  LINRTASPLSWFMECKDRKNHSALMLPHSFLPSMAAEKLRDAADKIKALLVDYDSIHVRR 120
           LINRTASPL+WF+ECKDR N S +MLP+SFL +MAA +LRDAA+KIKA L DYD+IHVRR
Sbjct: 208 LINRTASPLAWFVECKDRGNRSDVMLPYSFLQTMAASRLRDAAEKIKAKLGDYDAIHVRR 267

Query: 121 GDRLKTRKDRYGVDRSLFPHLDRDTRPEAILCRIKNWVPPGRTLFIASNERTPGFFSPLA 180
           GD+LKTRKDR+ V+RS FPHLDRDTRPE I+ RI+  +PPGRTLFI SNERTP FFSPLA
Sbjct: 268 GDKLKTRKDRFRVERSQFPHLDRDTRPEFIIGRIQKQIPPGRTLFIGSNERTPDFFSPLA 327

Query: 181 VRYNLAYSSNFSDILDLVVENNYQLFMVERLILMGARTFIKTYKEDDNDLSLTDDPKKNT 240
           +RY +AYSSNFS+ILD ++ENNYQLFMVERLI+MGA+TF KT++E + DL+LTDDPKKN 
Sbjct: 328 IRYKVAYSSNFSEILDPIIENNYQLFMVERLIMMGAKTFFKTFREYETDLTLTDDPKKN- 386

Query: 241 KNWQIPVYTMED 252
           KNW+IPVYTM++
Sbjct: 387 KNWEIPVYTMDE 398

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	255
TAIR|locus:2103640	403	AT3G56750 "AT3G56750" [Arabido	0.984	0.622	0.727	2.2e-98
TAIR|locus:2063192	404	AT2G41150 [Arabidopsis thalian	0.984	0.621	0.706	2e-95
TAIR|locus:2135773	561	AT4G12700 "AT4G12700" [Arabido	0.698	0.317	0.265	2.3e-10
TAIR|locus:2059767	568	AT2G04280 "AT2G04280" [Arabido	0.705	0.316	0.260	7.6e-09
TAIR|locus:2138228	552	SUB1 "AT4G08810" [Arabidopsis	0.674	0.311	0.265	1.5e-07

TAIR|locus:2103640 AT3G56750 "AT3G56750" [Arabidopsis thaliana (taxid:3702)]

 Score = 977 (349.0 bits), Expect = 2.2e-98, P = 2.2e-98
 Identities = 184/253 (72%), Positives = 222/253 (87%)

Query:     1 MDSLYDLELISETVPVILDNSKIWYHVLMTSMKLGARGVAHVEGVSRVNLNDNRRYSNLL 60
             MDSLYD++LISE +PVILD+SK W+ VL TSMKLG RG+AHV GV+R  L ++  YSNLL
Sbjct:   148 MDSLYDIDLISEKIPVILDDSKTWHIVLSTSMKLGERGIAHVSGVTRHRLKESH-YSNLL 206

Query:    61 LINRTASPLSWFMECKDRKNHSALMLPHSFLPSMAAEKLRDAADKIKALLVDYDSIHVRR 120
             +INRTASPL+WF+ECKDR N SA+MLP+SFLP+MAA KLR+AA+KIKA L DYD+IHVRR
Sbjct:   207 IINRTASPLAWFVECKDRSNRSAVMLPYSFLPNMAAAKLRNAAEKIKAQLGDYDAIHVRR 266

Query:   121 GDRLKTRKDRYGVDRSLFPHLDRDTRPEAILCRIKNWVPPGRTLFIASNERTPGFFSPLA 180
             GD+LKTRKDR+GV+R  FPHLDRDTRPE IL RI+  +P GRTLFI SNER PGFFSPLA
Sbjct:   267 GDKLKTRKDRFGVERIQFPHLDRDTRPEFILRRIEKRIPRGRTLFIGSNERKPGFFSPLA 326

Query:   181 VRYNLAYSSNFSDILDLVVENNYQLFMVERLILMGARTFIKTYKEDDNDLSLTDDPKKNT 240
             VRY LAYSSNFS+ILD ++ENNYQLFM+ERL++MGA+T+ KT+KE + DL+LTDDPKKN 
Sbjct:   327 VRYKLAYSSNFSEILDPIIENNYQLFMMERLVMMGAKTYFKTFKEYETDLTLTDDPKKN- 385

Query:   241 KNWQIPVYTMEDQ 253
             KNW+IPVYTM+++
Sbjct:   386 KNWEIPVYTMDER 398

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0009616 "virus induced gene silencing" evidence=RCA

GO:0010050 "vegetative phase change" evidence=RCA

GO:0005768 "endosome" evidence=IDA

GO:0005802 "trans-Golgi network" evidence=IDA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2063192 AT2G41150 [Arabidopsis thaliana (taxid:3702)]

 Score = 949 (339.1 bits), Expect = 2.0e-95, P = 2.0e-95
 Identities = 178/252 (70%), Positives = 218/252 (86%)

Query:     1 MDSLYDLELISETVPVILDNSKIWYHVLMTSMKLGARGVAHVEGVSRVNLNDNRRYSNLL 60
             M+SLYD++LISE +PVILD+S+ W+ +L TSMKL  RG AHV G +R  LND+  ++NLL
Sbjct:   148 MESLYDIDLISEKIPVILDDSETWHIMLSTSMKLKERGSAHVYGANRHELNDSSDFTNLL 207

Query:    61 LINRTASPLSWFMECKDRKNHSALMLPHSFLPSMAAEKLRDAADKIKALLVDYDSIHVRR 120
             LINRTASPL+WF+ECKDR N S +MLP+SFL +MAA +LRDAA+KIKA L DYD+IHVRR
Sbjct:   208 LINRTASPLAWFVECKDRGNRSDVMLPYSFLQTMAASRLRDAAEKIKAKLGDYDAIHVRR 267

Query:   121 GDRLKTRKDRYGVDRSLFPHLDRDTRPEAILCRIKNWVPPGRTLFIASNERTPGFFSPLA 180
             GD+LKTRKDR+ V+RS FPHLDRDTRPE I+ RI+  +PPGRTLFI SNERTP FFSPLA
Sbjct:   268 GDKLKTRKDRFRVERSQFPHLDRDTRPEFIIGRIQKQIPPGRTLFIGSNERTPDFFSPLA 327

Query:   181 VRYNLAYSSNFSDILDLVVENNYQLFMVERLILMGARTFIKTYKEDDNDLSLTDDPKKNT 240
             +RY +AYSSNFS+ILD ++ENNYQLFMVERLI+MGA+TF KT++E + DL+LTDDPKKN 
Sbjct:   328 IRYKVAYSSNFSEILDPIIENNYQLFMVERLIMMGAKTFFKTFREYETDLTLTDDPKKN- 386

Query:   241 KNWQIPVYTMED 252
             KNW+IPVYTM++
Sbjct:   387 KNWEIPVYTMDE 398

GO:0005739 "mitochondrion" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005768 "endosome" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0005802 "trans-Golgi network" evidence=IDA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2135773 AT4G12700 "AT4G12700" [Arabidopsis thaliana (taxid:3702)]

 Score = 169 (64.5 bits), Expect = 2.3e-10, P = 2.3e-10
 Identities = 52/196 (26%), Positives = 95/196 (48%)

Query:     5 YDLELISETVPVILDNSKIWYHVLMTSMKLGARGVAHVEGVSRVNLNDNRRYSNLLLINR 64
             +D E + E   + LD  + W        K G +   H+    RV         + L++ +
Sbjct:   318 FDFEHLKEAASM-LDQVQFWADWGKWYKKNGLK--LHLVEDFRVTPMKLVDVKDTLIMRK 374

Query:    65 --TASPLS-WFMECKDRKNHSALMLPHSFLPSMAAEKLRDAADKIKALLV-DYDSIHVRR 120
               T  P + W+  C+  +  S +  P + L    +++L +    I + L  DYD+IH+ R
Sbjct:   375 FGTVEPDNYWYRVCEG-ETESVVQRPWNLL--WKSKRLMEIVSAIASRLNWDYDAIHIER 431

Query:   121 GDRLKTRKDRYGVDRSLFPHLDRDTRPEAILCRIKNWVPPGRTLFIASNERTPGFFSPLA 180
             GD+ + ++        ++P+L++DT P +IL  +++ +  GR L+IA+NE    FF+PL 
Sbjct:   432 GDKARNKE--------VWPNLEKDTSPSSILSTLQDKIEQGRNLYIATNEPELSFFNPLK 483

Query:   181 VRYNLAYSSNFSDILD 196
              +Y   +   F D+ D
Sbjct:   484 DKYKPHFLDEFKDLWD 499

GO:0008150 "biological_process" evidence=ND

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2059767 AT2G04280 "AT2G04280" [Arabidopsis thaliana (taxid:3702)]

 Score = 157 (60.3 bits), Expect = 7.6e-09, P = 7.6e-09
 Identities = 51/196 (26%), Positives = 92/196 (46%)

Query:     5 YDLELISETVPVILDNSKIWYHVLMTSMKLGARGVAHVEGVSRVNLNDNRRYSNLLLINR 64
             +D E + E   V LD ++ W        K   R   H+    RV         + L++ +
Sbjct:   323 FDFEHLKEAASV-LDEAQFWAQWGKLRKKRRNRLNLHLVEDFRVTPMKLAAVKDTLIMRK 381

Query:    65 TAS--PLS-WFMECKDRKNHSALMLPHSFLPSMAAEKLRDAADKIKALLV-DYDSIHVRR 120
               S  P + W+  C+     S +  P   L    + +L +    I + L  DYD++H+ R
Sbjct:   382 FGSVEPDNYWYRVCEGDAE-SVVKRPWHLL--WKSRRLMEIVSAIASRLNWDYDAVHIER 438

Query:   121 GDRLKTRKDRYGVDRSLFPHLDRDTRPEAILCRIKNWVPPGRTLFIASNERTPGFFSPLA 180
             G++ + ++        ++P+L+ DT P A+L  +++ V  GR L+IA+NE    FF+PL 
Sbjct:   439 GEKARNKE--------VWPNLEADTSPSALLSTLQDKVEEGRHLYIATNEGELSFFNPLK 490

Query:   181 VRYNLAYSSNFSDILD 196
              +Y   +  ++ D+ D
Sbjct:   491 DKYATHFLYDYKDLWD 506

GO:0008150 "biological_process" evidence=ND

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0007020 "microtubule nucleation" evidence=RCA

GO:0005768 "endosome" evidence=IDA

GO:0005802 "trans-Golgi network" evidence=IDA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2138228 SUB1 "AT4G08810" [Arabidopsis thaliana (taxid:3702)]

 Score = 146 (56.5 bits), Expect = 1.5e-07, P = 1.5e-07
 Identities = 52/196 (26%), Positives = 94/196 (47%)

Query:     5 YDLELISETVPVI-----LDNSKIWYHVLMTSMKLGARGVAHVEGVSRVNLNDNRRYSNL 59
             +D E + ET  ++     L + K W    +   K+  R V     VS + L+ ++  S +
Sbjct:   312 FDFEHLKETASIVEEGEFLRDWKKWNR--LHKRKVPVRKVK-THRVSPLQLSKDK--STI 366

Query:    60 LLIN-RTASPLS-WFMECKDRKNHSALMLPHSFLPSMAAEKLRDAADKIKALLV-DYDSI 116
             +     T  P + W+  C+ + +       H+   S   ++L +   +I   +  D+D++
Sbjct:   367 IWRQFDTPEPENYWYRVCEGQASKYVERPWHALWKS---KRLMNIVSEISGKMDWDFDAV 423

Query:   117 HVRRGDRLKTRKDRYGVDRSLFPHLDRDTRPEAILCRIKNWVPPGRTLFIASNERTPGFF 176
             HV RG++ K +K        L+PHLD DT P+AIL ++K  V   R L++A+NE    +F
Sbjct:   424 HVVRGEKAKNKK--------LWPHLDADTWPDAILTKLKGLVQVWRNLYVATNEPFYNYF 475

Query:   177 SPLAVRYNLAYSSNFS 192
               L  +Y +    ++S
Sbjct:   476 DKLRSQYKVHLLDDYS 491


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.321   0.136   0.409    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      255       255   0.00085  114 3  11 22  0.43    33
                                                     32  0.48    36


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  5
  No. of states in DFA:  604 (64 KB)
  Total size of DFA:  203 KB (2114 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  21.94u 0.08s 22.02t   Elapsed:  00:00:06
  Total cpu time:  21.94u 0.08s 22.02t   Elapsed:  00:00:06
  Start:  Fri May 10 03:01:13 2013   End:  Fri May 10 03:01:19 2013

GO:0008150 "biological_process" evidence=ND

GO:0005509 "calcium ion binding" evidence=IDA

GO:0042175 "nuclear outer membrane-endoplasmic reticulum membrane network" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00023251001 SubName- Full=Chromosome chr8 scaffold_29, whole genome shotgun sequence; (398 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	255
cd11296	206	cd11296, O-FucT_like, GDP-fucose protein O-fucosyl	2e-06

>gnl|CDD|211383 cd11296, O-FucT_like, GDP-fucose protein O-fucosyltransferase and related proteins

 Score = 47.0 bits (112), Expect = 2e-06
 Identities = 27/137 (19%), Positives = 53/137 (38%), Gaps = 14/137 (10%)

Query: 96  AEKLRDAADKIKALLVD-----YDSIHVRRGDRLKTRKDRYGVDRSLFPHLDRDTRPEAI 150
           + ++R  AD+    L+      Y ++H+RRGD                         E I
Sbjct: 52  SPEIRKLADRFVRKLLGLPGGPYLAVHLRRGDFEVECCHLAKWMGEYLEECLLSA--EEI 109

Query: 151 LCRIKNWV--PPGRTLFIASNERTPG-FFSPL-AVRYNLAYSSNF---SDILDLVVENNY 203
             +IK  +     + +++A++E         L      +    +    +++L+L   +NY
Sbjct: 110 AEKIKELMAERKLKVVYVATDEADREELREELRKAGIRVVTKDDLLEDAELLELEKLDNY 169

Query: 204 QLFMVERLILMGARTFI 220
            L +V++ I   A  FI
Sbjct: 170 LLSLVDQEICSRADVFI 186

O-fucosyltransferase-like proteins are GDP-fucose dependent enzymes with similarities to the family 1 glycosyltransferases (GT1). They are soluble ER proteins that may be proteolytically cleaved from a membrane-associated preprotein, and are involved in the O-fucosylation of protein substrates, the core fucosylation of growth factor receptors, and other processes. Length = 206

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	255
PF10250	351	O-FucT: GDP-fucose protein O-fucosyltransferase; I	99.07
PF01531	298	Glyco_transf_11: Glycosyl transferase family 11; I	94.11

>PF10250 O-FucT: GDP-fucose protein O-fucosyltransferase; InterPro: IPR019378 This is a family of conserved proteins representing the enzyme responsible for adding O-fucose to EGF (epidermal growth factor-like) repeats

Probab=99.07  E-value=7e-11  Score=106.61  Aligned_cols=123  Identities=22%  Similarity=0.268  Sum_probs=64.3

Q ss_pred             ccchhHHHHHHHHHHHh----CCccEEEEeeC-ccccccccccc----------------------cccccCCCCCCCCC
Q 025301           94 MAAEKLRDAADKIKALL----VDYDSIHVRRG-DRLKTRKDRYG----------------------VDRSLFPHLDRDTR  146 (255)
Q Consensus        94 ~~a~~L~~~v~~I~~~l----gdfDavHVRRG-D~~~~~k~r~~----------------------v~r~l~P~ld~dts  146 (255)
                      -.++.++++|++++.++    |.|-|+|+|+| |+. +. -.++                      -.....|.      
T Consensus       174 ~~~~~i~~~a~~~i~~~~~~~~~yiavHlR~~~D~~-~~-C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~------  245 (351)
T PF10250_consen  174 RFSPEIRELADKFIKRLLAGGGPYIAVHLRRGKDWF-SA-CEFKGERHLLASPRCWGKKSINPEKKRRNGCCPS------  245 (351)
T ss_dssp             -B-HHHHHHHHHHHHHH----SSEEEEEE--SHHHH-HH-HCT-T----TTTHHHH-GGGTT-----HHHHS--------
T ss_pred             ecCHHHHHHHHHHHHHhhcccCceEEEeecccCchH-hh-cccCCchHHHHHhHhhccccccchhhhhcCCCCC------
Confidence            46788999999999887    39999999999 980 00 0000                      00011221      


Q ss_pred             hHHHHHhhhccc--CCCcEEEEecCCC--CCCCCchhhhhcceeeccch---HHhhcccCcchhhHHHHHHHHHhCCcee
Q 025301          147 PEAILCRIKNWV--PPGRTLFIASNER--TPGFFSPLAVRYNLAYSSNF---SDILDLVVENNYQLFMVERLILMGARTF  219 (255)
Q Consensus       147 pe~i~~~~~~~v--~~gr~LYIATdE~--~~~fF~pL~~~y~v~~LdDF---~~l~~~~~~N~Y~l~mVD~lV~srgktf  219 (255)
                      .+.+...++..+  ...++||||||+.  ....+++|++.|...+..+.   .++++++..  .++.|||++|+++|..|
T Consensus       246 ~~~~~~~i~~~~~~~~~~~vYiAtd~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~--~~~a~vD~~i~~~s~~F  323 (351)
T PF10250_consen  246 TPQEAKQILRALGKNNTTVVYIATDEIYGGERRLDPLKNMFPNVVTKDDLLSHEELEPLND--DQLAMVDQEICSRSDVF  323 (351)
T ss_dssp             HHHHHHHHHHHHHHHT-SEEEEEESS-----------HHHHHHHHGGGT--EE--S-------S--HHHHHHHHHHSSEE
T ss_pred             hHHHHHHHHHHhccCCCCEEEEecCcccccchhHHHHHHHhhhhEeccccCCHHHhhhccc--cchhHHHHHHHhcCCEE
Confidence            233444444333  3469999999994  34577888888875441111   122333333  66779999999999999


Q ss_pred             Eeecccc
Q 025301          220 IKTYKED  226 (255)
Q Consensus       220 vgTf~~~  226 (255)
                      |||..|.
T Consensus       324 igt~~St  330 (351)
T PF10250_consen  324 IGTCGST  330 (351)
T ss_dssp             EE-TT-H
T ss_pred             EecCcch
Confidence            9999873

Six highly conserved cysteines are present as well as a DXD-like motif (ERD), conserved in mammals, Drosophila, and Caenorhabditis elegans. Both features are characteristic of several glycosyltransferase families. The enzyme is a membrane-bound protein released by proteolysis and, as for most glycosyltransferases, is strongly activated by manganese []. ; PDB: 3ZY6_A 3ZY3_A 3ZY5_A 3ZY2_A 3ZY4_A.

>PF01531 Glyco_transf_11: Glycosyl transferase family 11; InterPro: IPR002516 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases

Probab=94.11  E-value=0.067  Score=49.05  Aligned_cols=84  Identities=15%  Similarity=0.176  Sum_probs=46.2

Q ss_pred             CCccEEEEeeCccccccccccccccccCCCCCCCCChHHHHHh---hhcccCCCcEEEEecCCCCCCCCchhhhhcc---
Q 025301          111 VDYDSIHVRRGDRLKTRKDRYGVDRSLFPHLDRDTRPEAILCR---IKNWVPPGRTLFIASNERTPGFFSPLAVRYN---  184 (255)
Q Consensus       111 gdfDavHVRRGD~~~~~k~r~~v~r~l~P~ld~dtspe~i~~~---~~~~v~~gr~LYIATdE~~~~fF~pL~~~y~---  184 (255)
                      ...-+|||||||.......+     ..++.    .+++-..+.   +++. .++-++||.||+.+-     .++.+.   
T Consensus       163 ~~~V~VHIRRGDy~~~~~~~-----~~~~~----~~~~Yy~~Ai~~i~~~-~~~~~f~ifSDD~~w-----~k~~l~~~~  227 (298)
T PF01531_consen  163 SNSVCVHIRRGDYVSNGNHN-----WKHGI----CDKDYYKKAIEYIREK-VKNPKFFIFSDDIEW-----CKENLKFSN  227 (298)
T ss_pred             CCeEEEEEEchhcccccccc-----ccCCC----CCHHHHHHHHHHHHHh-CCCCEEEEEcCCHHH-----HHHHHhhcC
Confidence            38899999999997654210     11111    224444333   3332 246689999997542     222221   


Q ss_pred             --eeeccchHHhhcccCcchhhHHHHHHHHHhCCceeEee
Q 025301          185 --LAYSSNFSDILDLVVENNYQLFMVERLILMGARTFIKT  222 (255)
Q Consensus       185 --v~~LdDF~~l~~~~~~N~Y~l~mVD~lV~srgktfvgT  222 (255)
                        +.+..+             .-+..|=..++.++.+|.+
T Consensus       228 ~~~~~~~~-------------~~~~~Dl~lms~C~~~Iis  254 (298)
T PF01531_consen  228 GDVYFSGN-------------NSPYEDLYLMSQCKHFIIS  254 (298)
T ss_pred             CcEEEECC-------------CCHHHHHHHHHhCCcEEEC
Confidence              111111             1224566667889999988

These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 11 GT11 from CAZY comprises enzymes with only one known activity; galactoside 2-L-fucosyltransferase (2.4.1.69 from EC). Some of the proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Galactoside 2-L-fucosyltransferase 1 (2.4.1.69 from EC) and Galactoside 2-L-fucosyltransferase 2 (2.4.1.69 from EC) belong to the Hh blood group system and are associated with H/h and Se/se antigens.; GO: 0008107 galactoside 2-alpha-L-fucosyltransferase activity, 0005975 carbohydrate metabolic process, 0016020 membrane

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	255
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-07
4ap5_A	408	GDP-fucose protein O-fucosyltransferase 2; GT-B, G	1e-04

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 50.6 bits (120), Expect = 2e-07
 Identities = 45/251 (17%), Positives = 82/251 (32%), Gaps = 58/251 (23%)

Query: 16  VILDN---SKIWYH------VLMTSMKLGARGVAHVEGVSRVNLNDNRRYSNLLLINRTA 66
           ++L N   +K W        +L+T+              + ++L+ +   S  L  +   
Sbjct: 248 LVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHH---SMTLTPDEVK 304

Query: 67  SPLSWFMECKDRKNHSALMLPHS------FLPSMAAEKLRDAADKIKALL-VDYDSI-HV 118
           S L  +++C+ +       LP           S+ AE +RD          V+ D +  +
Sbjct: 305 SLLLKYLDCRPQD------LPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTI 358

Query: 119 RRG--DRLKTR--KDRYGVDRSLFPHLDRDTR-PEAILCRIKNWVPPGRTLFIASNERTP 173
                + L+    +  +    S+FP        P  +L  I  W            +   
Sbjct: 359 IESSLNVLEPAEYRKMF-DRLSVFP---PSAHIPTILLSLI--WF--------DVIKSDV 404

Query: 174 GFFSPLAVRYNLA------YSSNFSDI-LDLV--VENNYQLFMVERLILMGARTFIKTYK 224
                   +Y+L        + +   I L+L   +EN Y L    R I+       KT+ 
Sbjct: 405 MVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYAL---HRSIV-DHYNIPKTFD 460

Query: 225 EDDNDLSLTDD 235
            DD      D 
Sbjct: 461 SDDLIPPYLDQ 471

>4ap5_A GDP-fucose protein O-fucosyltransferase 2; GT-B, GT68; HET: NAG; 3.00A {Homo sapiens} PDB: 4ap6_A* Length = 408

 Score = 42.0 bits (98), Expect = 1e-04
 Identities = 21/119 (17%), Positives = 45/119 (37%), Gaps = 17/119 (14%)

Query: 107 KALLVDYDSIHVRRGDRLKTRKDRYGVDRSLFPHLDRDTRPEAILCRIKNWV--PPGRTL 164
            AL   Y  +H+RR D +   +          P L      E  + +I++ +       +
Sbjct: 261 SALGGPYLGVHLRRKDFIWGHRQD-------VPSL------EGAVRKIRSLMKTHRLDKV 307

Query: 165 FIASNERTPGFFSPLAVRYNLAYSSNFSDILDLVVENNYQLFMVERLILMGARTFIKTY 223
           F+A++     +     +   +       + L+L    +  + ++++ I   AR FI T 
Sbjct: 308 FVATDAVRKEYEELKKLLPEMVRFEPTWEELELY--KDGGVAIIDQWICAHARFFIGTS 364

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	255
4ap5_A	408	GDP-fucose protein O-fucosyltransferase 2; GT-B, G	99.4
3zy2_A	362	Putative GDP-fucose protein O-fucosyltransferase;	98.43
2de0_X	526	Alpha-(1,6)-fucosyltransferase; FUT8, glycosyltran	97.7
2hhc_A	330	NODZ, nodulation fucosyltransferase NODZ; glycosyl	96.52

>4ap5_A GDP-fucose protein O-fucosyltransferase 2; GT-B, GT68; HET: NAG; 3.00A {Homo sapiens} PDB: 4ap6_A*

Probab=99.40  E-value=7.7e-14  Score=129.01  Aligned_cols=117  Identities=19%  Similarity=0.245  Sum_probs=88.9

Q ss_pred             cchhHHHHHHHHHHHh----------------------------CCccEEEEeeCccccccccccccccccCCCCCCCCC
Q 025301           95 AAEKLRDAADKIKALL----------------------------VDYDSIHVRRGDRLKTRKDRYGVDRSLFPHLDRDTR  146 (255)
Q Consensus        95 ~a~~L~~~v~~I~~~l----------------------------gdfDavHVRRGD~~~~~k~r~~v~r~l~P~ld~dts  146 (255)
                      .++.|+++|++.+...                            |.|.|+|+||||++..++       ...|      +
T Consensus       221 ~s~~l~~~a~~fi~~~L~~~~~~~h~r~~~dw~~~~~~~~~~~~~~y~~~H~Rr~d~~~~~~-------~~~p------s  287 (408)
T 4ap5_A          221 FARHLREVGDEFRSRHLNSTDDADRIPFQEDWMKMKVKLGSALGGPYLGVHLRRKDFIWGHR-------QDVP------S  287 (408)
T ss_dssp             BCHHHHHHHHHHHHHHHCCCTTTTTCCCCSSGGGCCCCTTCBCCEEEEEEEECCTTTTTTTC-------SSSC------C
T ss_pred             hhHHHHHHHHHHHHHHhCcccceeecccchhHhhhhcccccccCCCccccccccccchhhhh-------ccCC------C
Confidence            5889999998877632                            379999999999986653       3334      3


Q ss_pred             hHHHHHhhhcccC--CCcEEEEecCCCCCCCCchhhhhcceeeccchHHhhcccCcchhhHHHHHHHHHhCCceeEeecc
Q 025301          147 PEAILCRIKNWVP--PGRTLFIASNERTPGFFSPLAVRYNLAYSSNFSDILDLVVENNYQLFMVERLILMGARTFIKTYK  224 (255)
Q Consensus       147 pe~i~~~~~~~v~--~gr~LYIATdE~~~~fF~pL~~~y~v~~LdDF~~l~~~~~~N~Y~l~mVD~lV~srgktfvgTf~  224 (255)
                      .+.+++.|++.+.  ..+.||||||+.+..+++..+...++.++.++.+.++..+++.+.  ||||+|++||+.||||..
T Consensus       288 ~~~~~~~i~~~~~~~~~~~VyiATD~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~d~~~a--~idq~Ic~~a~~FiGt~~  365 (408)
T 4ap5_A          288 LEGAVRKIRSLMKTHRLDKVFVATDAVRKEYEELKKLLPEMVRFEPTWEELELYKDGGVA--IIDQWICAHARFFIGTSV  365 (408)
T ss_dssp             HHHHHHHHHHHHHHHTCSCEEEEECCCHHHHHHHHHHCTTEECCCCCHHHHHHHHHHHHH--HHHHHHHHTEEEEEBCTT
T ss_pred             HHHHHHHHHHHHHhcCCCEEEEeCCCchhHHHHHHHhCCCcEEecCcchhhhccCcchhh--HHHHHHHHhCCeeEeCCc
Confidence            4455555555443  468899999998776666555556777778888877777666654  999999999999999999


Q ss_pred             cc
Q 025301          225 ED  226 (255)
Q Consensus       225 ~~  226 (255)
                      |.
T Consensus       366 St  367 (408)
T 4ap5_A          366 ST  367 (408)
T ss_dssp             CH
T ss_pred             Cc
Confidence            87

>3zy2_A Putative GDP-fucose protein O-fucosyltransferase; glycosyltransferase, GT-B, catalytic mechanism,; HET: GDP; 1.54A {Caenorhabditis elegans} PDB: 3zy3_A* 3zy4_A* 3zy5_A* 3zy6_A*

Probab=98.43  E-value=2.6e-07  Score=87.13  Aligned_cols=115  Identities=17%  Similarity=0.236  Sum_probs=78.5

Q ss_pred             ccchhHHHHHHH-HHHHhC-CccEEEEeeC-ccccccccccccccccCCCCCC-----------C--------CChHHHH
Q 025301           94 MAAEKLRDAADK-IKALLV-DYDSIHVRRG-DRLKTRKDRYGVDRSLFPHLDR-----------D--------TRPEAIL  151 (255)
Q Consensus        94 ~~a~~L~~~v~~-I~~~lg-dfDavHVRRG-D~~~~~k~r~~v~r~l~P~ld~-----------d--------tspe~i~  151 (255)
                      -+|+.+...|++ |.+-|+ .|-|||.||| |....-.   .+.-.--|++=.           .        -|.+.|+
T Consensus       192 ~WS~~i~~~a~~fI~~~L~rpyVgIHLR~G~DW~~aC~---hlk~~~~~~lfaSPQC~Gy~~~~~~lt~emClPSle~I~  268 (362)
T 3zy2_A          192 RWSSRITEQAKKFISANLAKPFVAVHLRNDADWVRVCE---HIDTTTNRPLFASEQCLGEGHHLGTLTKEICSPSKQQIL  268 (362)
T ss_dssp             CBCHHHHHHHHHHHHHHCCSSEEEEEECCCHHHHHHHH---TCCTTTCCCCTTTHHHHCGGGTTCCCCHHHHSCCHHHHH
T ss_pred             cccHHHHHHHHHHHHHhcCCCeEEEEEecCCcHHHHHh---hhccccCcccccCCcccCCcccCcccchhccCCCHHHHH
Confidence            378899999999 556587 9999999999 7752110   000000122110           0        1467788


Q ss_pred             HhhhcccC--CCcEEEEecCCCCCCCCchhhhhcc-----eeeccchHHhhcccCcchhhHHHHHHHHHhCCceeEeecc
Q 025301          152 CRIKNWVP--PGRTLFIASNERTPGFFSPLAVRYN-----LAYSSNFSDILDLVVENNYQLFMVERLILMGARTFIKTYK  224 (255)
Q Consensus       152 ~~~~~~v~--~gr~LYIATdE~~~~fF~pL~~~y~-----v~~LdDF~~l~~~~~~N~Y~l~mVD~lV~srgktfvgTf~  224 (255)
                      +.|+.++.  .-+.||||||...  +.+.|++.++     |+-++          ++   .++||+.|++++..|||+-.
T Consensus       269 rqIk~~vk~~~lksVFIATDa~~--~~~ELk~~L~~~~v~vv~~~----------pe---~a~ID~~I~~~A~~FIGN~~  333 (362)
T 3zy2_A          269 EQIVEKVGSIGAKSVFVASDKDH--MIDEINEALKPYEIEAHRQE----------PD---DMYTSLAIMGRADLFVGNCV  333 (362)
T ss_dssp             HHHHHHHHHHTCSEEEEEESSCC--CHHHHHHHHGGGTCCEECCS----------SC---CHHHHHHHHHHSSEEEECTT
T ss_pred             HHHHHHHHhcCCcEEEEecCCHH--HHHHHHHHhhccCceEEEeC----------Cc---hhHHHHHHHHhCCEeecCcc
Confidence            88887665  5799999999764  7888887543     33222          12   56999999999999999987


Q ss_pred             cc
Q 025301          225 ED  226 (255)
Q Consensus       225 ~~  226 (255)
                      |.
T Consensus       334 SS  335 (362)
T 3zy2_A          334 ST  335 (362)
T ss_dssp             CH
T ss_pred             cc
Confidence            76

>2de0_X Alpha-(1,6)-fucosyltransferase; FUT8, glycosyltransferase, N-glycan, COR SH3 domain; 2.61A {Homo sapiens}

Probab=97.70  E-value=2.7e-05  Score=75.86  Aligned_cols=123  Identities=15%  Similarity=0.207  Sum_probs=72.7

Q ss_pred             cchhHHHHHHHHHHHhC---CccEEEEeeCccccccccccccccccCCCCCCCCChHHHHHhhhc-ccCCCcEEEEecCC
Q 025301           95 AAEKLRDAADKIKALLV---DYDSIHVRRGDRLKTRKDRYGVDRSLFPHLDRDTRPEAILCRIKN-WVPPGRTLFIASNE  170 (255)
Q Consensus        95 ~a~~L~~~v~~I~~~lg---dfDavHVRRGD~~~~~k~r~~v~r~l~P~ld~dtspe~i~~~~~~-~v~~gr~LYIATdE  170 (255)
                      .++.+.+.+++..+.+|   -.-+|||||||+....       ...+|..+--...+.+++.+.. .-+....+|||||.
T Consensus       276 P~~~i~~~I~~~~~~l~~~~piVGVHIRrGDk~~~E-------~~~~~~~~Y~~~v~~~~~~l~~~~~~~~~~ifLATDD  348 (526)
T 2de0_X          276 PQPWLEKEIEEATKKLGFKHPVIGVHVRRTDKVGTE-------AAFHPIEEYMVHVEEHFQLLARRMQVDKKRVYLATDD  348 (526)
T ss_dssp             BCHHHHHHHHHHHHHHTCCSSEEEEEECCC-----C-------CCSCSHHHHHHHHHHHHHHHHTTSCCSSCEEEEEESC
T ss_pred             CCHHHHHHHHHHHHHhCCCCCEEEEEEeCCCCCccc-------cccCCHHHHHHHHHHHHHHHHhhcCCCCCeEEEEcCC
Confidence            35667777888887763   7899999999995322       1334321100013444444443 34678999999995


Q ss_pred             CCCCCCchhhhhcce-eeccc--hHHhhc---ccCcchhhHHHHHHHHHhCCceeEeecccc
Q 025301          171 RTPGFFSPLAVRYNL-AYSSN--FSDILD---LVVENNYQLFMVERLILMGARTFIKTYKED  226 (255)
Q Consensus       171 ~~~~fF~pL~~~y~v-~~LdD--F~~l~~---~~~~N~Y~l~mVD~lV~srgktfvgTf~~~  226 (255)
                      +  ..++.++++|.- .+..|  +..-++   ..+.++.--.++|-.+++++..||||+.|.
T Consensus       349 p--~v~~e~k~~~p~~~~~~d~~~~~~a~~~~R~s~~~l~~~l~DL~lLs~cd~~Vgt~sS~  408 (526)
T 2de0_X          349 P--SLLKEAKTKYPNYEFISDNSISWSAGLHNRYTENSLRGVILDIHFLSQADFLVCTFSSQ  408 (526)
T ss_dssp             H--HHHHHHHHHCTTSEEECCCCSSCSSGGGGGTCCTHHHHHHHHHHHHHHSSEEEECTTSH
T ss_pred             H--HHHHHHHHhCCCCEEecCcccccccCccccccHHHHHHHHHHHHHHhcCCeeecCCCCH
Confidence            4  458888765531 12222  100011   122344455689999999999999999876

>2hhc_A NODZ, nodulation fucosyltransferase NODZ; glycosyltransferase; 1.54A {Bradyrhizobium SP} PDB: 2hlh_A 2ocx_A* 3siw_A* 3six_A*

Probab=96.52  E-value=0.004  Score=55.31  Aligned_cols=118  Identities=9%  Similarity=0.085  Sum_probs=63.0

Q ss_pred             chhHHHHHHHHHHHh--C-CccEEEEeeCccccccccccccccccCCCCCCCCChHHHHHhhhccc---C-CCcEEEEec
Q 025301           96 AEKLRDAADKIKALL--V-DYDSIHVRRGDRLKTRKDRYGVDRSLFPHLDRDTRPEAILCRIKNWV---P-PGRTLFIAS  168 (255)
Q Consensus        96 a~~L~~~v~~I~~~l--g-dfDavHVRRGD~~~~~k~r~~v~r~l~P~ld~dtspe~i~~~~~~~v---~-~gr~LYIAT  168 (255)
                      ++.+.+.++++...+  | .+-||||||||....-..  +.   -|...  ...-+.+++.++...   + ....+||||
T Consensus       151 ~~~i~~~i~~~~~~~~~~~~~VGVHIRrgD~~~~~~~--~~---~~~~~--~~~l~~~~~~i~~~~~~~~~~~~~vfvaS  223 (330)
T 2hhc_A          151 RSEIRARIDALYEEHFSGHSIIGVHVRHGNGEDIMEH--AP---YWADS--ELALHQVCMAIRKAKALSYPKPVKVFLCT  223 (330)
T ss_dssp             CHHHHHHHHHHHHHHTTTSEEEEEEECC-----------------CHHH--HHHHHHHHHHHHHHHTSCCSSCEEEEEEE
T ss_pred             cHHHHHHHHHHHHHhccCCceEEEEEecCCCCccccc--Cc---chHHH--hHHHHHHHHHHHHHHhccCcCceEEEEEe
Confidence            455666666666443  3 688999999995321100  00   00000  001345555554432   2 358999999


Q ss_pred             CCCCCCCCchhhhhcceeeccchHHhh---ccc-----CcchhhHHHHHHHHHhCCceeE--ee
Q 025301          169 NERTPGFFSPLAVRYNLAYSSNFSDIL---DLV-----VENNYQLFMVERLILMGARTFI--KT  222 (255)
Q Consensus       169 dE~~~~fF~pL~~~y~v~~LdDF~~l~---~~~-----~~N~Y~l~mVD~lV~srgktfv--gT  222 (255)
                      |.+  .+.+.|++.|.-.+..+..-..   .++     +.++-..+.+|-..+|+++.+|  +.
T Consensus       224 Dd~--~~~~~lk~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~Dm~LLS~cd~~I~~~~  285 (330)
T 2hhc_A          224 DSA--QVLDQVSGLFPDVFAVPKRFQADRAGPLHSAEMGIEGGASALIDMYLLARCATVIRFPP  285 (330)
T ss_dssp             SCH--HHHHHHHHHSTTEECCCC-----------CHHHHHHHHHHHHHHHHHHTTCSEEEEEST
T ss_pred             CCH--HHHHHHHHHcCCcccccceeecccccccccCchhhccchHHHHHHHHHHcCCeeEECCC
Confidence            986  4888999888543332211000   001     1234556789999999999998  64

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00