Citrus Sinensis ID: 025307

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-----
Protein Sequence
MLAREGEREKVGDKPVKYHGKWPFRRVYGIQVEPVAVALSALNLSIQFHGWMSFFILLYYKLPLRPDKKTYYEYTGLWHIYGILAMNSWFWSAVFHSRDVELTEKLDCSSAVALLGFNFILAILRAFSVRDEAARVMVAAPLIAFVTTHILYLNFYKLDHGLNMKVCLAMGVAQLLIWAIWAGVTRHPSRWKLWLVVVGEGLAMLLQIYDFPPYRGFVDAHALYHAANIPLTYLWWSFIRDDSEFRTTALLKKPK
Secondary Structure (PSIPRED)
cHHHHHHHHHccccccccccccccHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHccccccEEHHHHHHHHHHHHHHHHccccccccHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHcccc
Secondary Structure Prediction (SSPRO)
cccHHHHHHHccccccEEcccccHHHEccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHccc
Coil and Loop (DISEMBL)
mlaregerekvgdkpvkyhgkwpfrrvygiQVEPVAVALSALNLSIQFHGWMSFFILLYYklplrpdkktyyeYTGLWHIYGILAMNSWFWSAVFHSrdvelteklDCSSAVALLGFNFILAILRAFSVRDEAARVMVAAPLIAFVTTHILYLNFYKLDHGLNMKVCLAMGVAQLLIWAIWAgvtrhpsrWKLWLVVVGEGLAMLLQiydfppyrgfvdahaLYHAANIPLTYLWWSFIRDDSEFRTTALLKKPK
Flexible Loop (DISEMBL)
mlaregerekvgdkpvkyhgkwpfrRVYGIQVEPVAVALSALNLSIQFHGWMSFFILLYYKLPLRPDKKTYYEYTGLWHIYGILAMNSWFWSAVFHSRDVELTEKLDCSSAVALLGFNFILAILRAFSVRDEAARVMVAAPLIAFVTTHILYLNFYKLDHGLNMKVCLAMGVAQLLIWAIWAGVTRHPSRWKLWLVVVGEGLAMLLQIYDFPPYRGFVDAHALYHAANIPLTYLWWSFIRDDSEFRTTALLKKPK
Low Complexity Region (SEG)
MLAREGEREKVGDKPVKYHGKWPFRRVYGIQVEPVAVALSALNLSIQFHGWMSFFILLYYKLPLRPDKKTYYEYTGLWHIYGILAMNSWFWSAVFHSRDVELTEKLDCSSAVALLGFNFILAILRAFSVRDEAARVMVAAPLIAFVTTHILYLNFYKLDHGLNMKVCLAMGVAQLLIWAIWAGVTRHPSRWKLWLVVVGEGLAMLLQIYDFPPYRGFVDAHALYHAANIPLTYLWWSFIRDDSEFRTTALLKKPK
Disordered region (IsUnstruct)
***************VKYHGKWPFRRVYGIQVEPVAVALSALNLSIQFHGWMSFFILLYYKLPLRPDKKTYYEYTGLWHIYGILAMNSWFWSAVFHSRDVELTEKLDCSSAVALLGFNFILAILRAFSVRDEAARVMVAAPLIAFVTTHILYLNFYKLDHGLNMKVCLAMGVAQLLIWAIWAGVTRHPSRWKLWLVVVGEGLAMLLQIYDFPPYRGFVDAHALYHAANIPLTYLWWSFIRDDSEFR*********
Disordered Region (DISOPRED)
*****GEREKVGDKPVKYHGKWPFRRVYGIQVEPVAVALSALNLSIQFHGWMSFFILLYYKL******KTYYEYTGLWHIYGILAMNSWFWSAVFHSRDVELTEKLDCSSAVALLGFNFILAILRAFSVRDEAARVMVAAPLIAFVTTHILYLNFYKLDHGLNMKVCLAMGVAQLLIWAIWAGVTRHPSRWKLWLVVVGEGLAMLLQIYDFPPYRGFVDAHALYHAANIPLTYLWWSFIRDDSEFRTTAL*****
Disordered Region (DISEMBL)
*************KPVKYHGKWPFRRVYGIQVEPVAVALSALNLSIQFHGWMSFFILLYYKLPLRPDKKTYYEYTGLWHIYGILAMNSWFWSAVFHSRDVELTEKLDCSSAVALLGFNFILAILRAFSVRDEAARVMVAAPLIAFVTTHILYLNFYKLDHGLNMKVCLAMGVAQLLIWAIWAGVTRHPSRWKLWLVVVGEGLAMLLQIYDFPPYRGFVDAHALYHAANIPLTYLWWSFIRDDSEFRTTALLKKPK
Disordered Region (DISPRO)
*****G****VGDKPVKYHGKWPFRRVYGIQVEPVAVALSALNLSIQFHGWMSFFILLYYKLPLRPDKKTYYEYTGLWHIYGILAMNSWFWSAVFHSRDVELTEKLDCSSAVALLGFNFILAILRAFSVRDEAARVMVAAPLIAFVTTHILYLNFYKLDHGLNMKVCLAMGVAQLLIWAIWAGVTRHPSRWKLWLVVVGEGLAMLLQIYDFPPYRGFVDAHALYHAANIPLTYLWWSFIRDDSEFRTTALL****
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MLAREGEREKVGDKPVKYHGKWPFRRVYGIQVEPVAVALSALNLSIQFHGWMSFFILLYYKLPLRPDKKTYYEYTGLWHIYGILAMNSWFWSAVFHSRDVELTEKLDCSSAVALLGFNFILAILRAFSVRDEAARVMVAAPLIAFVTTHILYLNFYKLDHGLNMKVCLAMGVAQLLIWAIWAGVTRHPSRWKLWLVVVGEGLAMLLQIYDFPPYRGFVDAHALYHAANIPLTYLWWSFIRDDSEFRTTALLKKPK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	255	2.2.26 [Sep-21-2011]
Q0VFE3	316	Post-GPI attachment to pr	yes	no	0.874	0.705	0.334	1e-29
A8WFS8	316	Post-GPI attachment to pr	yes	no	0.890	0.718	0.341	2e-28
Q68EV0	317	Post-GPI attachment to pr	N/A	no	0.874	0.703	0.343	5e-28
A2A559	320	Post-GPI attachment to pr	yes	no	0.866	0.690	0.333	1e-27
Q7K0P4	326	Post-GPI attachment to pr	yes	no	0.831	0.650	0.315	2e-27
Q9P6N9	331	Protein PER1 homolog OS=S	yes	no	0.854	0.658	0.330	9e-27
Q96FM1	320	Post-GPI attachment to pr	yes	no	0.866	0.690	0.324	2e-25
A7YWP2	319	Post-GPI attachment to pr	yes	no	0.858	0.686	0.336	2e-25
A2V7M9	320	Post-GPI attachment to pr	yes	no	0.866	0.690	0.320	5e-25
P25625	357	Protein PER1 OS=Saccharom	yes	no	0.898	0.641	0.269	3e-11

>sp|Q0VFE3|PGAP3_XENTR Post-GPI attachment to proteins factor 3 OS=Xenopus tropicalis GN=pgap3 PE=2 SV=1

 Score =  129 bits (325), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 79/236 (33%), Positives = 121/236 (51%), Gaps = 13/236 (5%)

Query: 10  KVGDKPVKYHGKWPFRRVYGIQVEPVAVALSALNLSIQFHGWMSFFILLYYKLPLRPDKK 69
           K G +  ++HGKWPF R    Q EP +   S LN      G  S  +LL Y+  +    +
Sbjct: 77  KEGHEVPQFHGKWPFSRFLFFQ-EPASALASFLN------GVASLLMLLRYRSSVPSSCQ 129

Query: 70  TYYEYTGLWHIYGILAMNSWFWSAVFHSRDVELTEKLDCSSAVALLGFNFILAILRAFSV 129
            Y         + ++++N+WFWS +FH+RD  LTEK+D   A +++  +  L  +R F +
Sbjct: 130 MYRTCLA----FSMVSVNAWFWSTIFHTRDTALTEKMDYFCASSVILHSIYLCCMRTFGL 185

Query: 130 RDEAARVMVAAPLIAFVTTHILYLNFYKLDHGLNMKVCLAMGVAQLLIWAIWAGVTR--H 187
           +  +      A L+     H+ YL   + D+  NM      GV  L+ W  W    R   
Sbjct: 186 QYPSIANGFGAFLVLLFACHVSYLTLGRFDYSYNMAANTGFGVLNLMWWLAWCFRRRFHQ 245

Query: 188 PSRWKLWLVVVGEGLAMLLQIYDFPPYRGFVDAHALYHAANIPLTYLWWSFIRDDS 243
           P  WK  LVV+      LL++ DFPP    +DAHAL+H + +PL +L++SF++DDS
Sbjct: 246 PYLWKCVLVVISLQSLALLELLDFPPVMWILDAHALWHFSTVPLHFLFYSFLKDDS 301

Involved in the lipid remodeling steps of GPI-anchor maturation.
Xenopus tropicalis (taxid: 8364)

>sp|A8WFS8|PGAP3_DANRE Post-GPI attachment to proteins factor 3 OS=Danio rerio GN=pgap3 PE=2 SV=1

 Score =  125 bits (315), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 82/240 (34%), Positives = 127/240 (52%), Gaps = 13/240 (5%)

Query: 6   GEREKVGDKPVKYHGKWPFRRVYGIQVEPVAVALSALNLSIQFHGWMSFFILLYYKLPLR 65
           G  +  G    ++HGKWPF R    + EP +   S LN      G     +LL Y+  + 
Sbjct: 74  GLYQAEGYSIPQFHGKWPFARFLCFE-EPASALASLLN------GLACLLMLLRYRSAVP 126

Query: 66  PDKKTYYEYTGLWHIYGILAMNSWFWSAVFHSRDVELTEKLDCSSAVALLGFNFILAILR 125
                Y+  T     + ++++N+WFWS VFH+RD  LTEK+D   A A++ ++  L  +R
Sbjct: 127 CQSPMYHTITA----FSLVSLNAWFWSTVFHTRDTYLTEKMDYFCASAVILYSIYLCCVR 182

Query: 126 AFSVRDEAARVMVAAPLIAFVTTHILYLNFYKLDHGLNMKVCLAMGVAQLLIWAIWAGVT 185
              +R  A   MV   LI   T+H+ YL F   D+G NM    ++G+  LL W  W  + 
Sbjct: 183 TLGLRRPAISSMVGVLLILAFTSHVSYLTFVSFDYGYNMAANASIGIINLLWWLCWCWLN 242

Query: 186 RH--PSRWKLWLVVVGEGLAMLLQIYDFPPYRGFVDAHALYHAANIPLTYLWWSFIRDDS 243
           R   P  W+  +VV+      LL++ DFPP    +DAHA++H + +P+ +L++SF+ DDS
Sbjct: 243 RRILPYWWRCGMVVLLLHGLALLELLDFPPLFWVLDAHAVWHLSTVPVHFLFYSFLIDDS 302

Involved in the lipid remodeling steps of GPI-anchor maturation.

Danio rerio (taxid: 7955)

>sp|Q68EV0|PGAP3_XENLA Post-GPI attachment to proteins factor 3 OS=Xenopus laevis GN=pgap3 PE=2 SV=1

 Score =  124 bits (312), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 81/236 (34%), Positives = 121/236 (51%), Gaps = 13/236 (5%)

Query: 10  KVGDKPVKYHGKWPFRRVYGIQVEPVAVALSALNLSIQFHGWMSFFILLYYKLPLRPDKK 69
           K G +  ++HGKWPF R    Q EP +   S LN      G  S  +L  Y+  +    +
Sbjct: 77  KEGHEVPQFHGKWPFSRFLFFQ-EPASALASFLN------GVASLLMLFRYRSSVPSSCQ 129

Query: 70  TYYEYTGLWHIYGILAMNSWFWSAVFHSRDVELTEKLDCSSAVALLGFNFILAILRAFSV 129
            Y         + ++++N+WFWS +FH+RD  LTEK+D   A +++  +  L  +R F +
Sbjct: 130 MYRTCLA----FSMVSVNAWFWSTIFHTRDTALTEKMDYFCASSVILHSIYLCCMRTFGL 185

Query: 130 RDEAARVMVAAPLIAFVTTHILYLNFYKLDHGLNMKVCLAMGVAQLLIWAIWAGVTR--H 187
           +  +      A L+     HI YL   + D+  NM    + G+  L+ W  W    R   
Sbjct: 186 QYPSIANAFGAFLVLLFACHISYLTLGRFDYSYNMAANTSFGIVNLMWWLAWCMWRRFHQ 245

Query: 188 PSRWKLWLVVVGEGLAMLLQIYDFPPYRGFVDAHALYHAANIPLTYLWWSFIRDDS 243
           P  WK  LVVV      LL++ DFPP    +DAHAL+H + IPL +L++SF+RDDS
Sbjct: 246 PYLWKCVLVVVLLQSLALLELLDFPPVMWILDAHALWHFSTIPLHFLFYSFLRDDS 301

Involved in the lipid remodeling steps of GPI-anchor maturation.

Xenopus laevis (taxid: 8355)

>sp|A2A559|PGAP3_MOUSE Post-GPI attachment to proteins factor 3 OS=Mus musculus GN=Pgap3 PE=2 SV=1

 Score =  123 bits (309), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 78/234 (33%), Positives = 121/234 (51%), Gaps = 13/234 (5%)

Query: 12  GDKPVKYHGKWPFRRVYGIQVEPVAVALSALNLSIQFHGWMSFFILLYYKLPLRPDKKTY 71
           G +  ++HGKWPF R   IQ EP +   S LN      G  S  +L  Y+  +      Y
Sbjct: 84  GHRVPQFHGKWPFSRFLFIQ-EPASAVASLLN------GLASLVMLCRYRASVPASSPMY 136

Query: 72  YEYTGLWHIYGILAMNSWFWSAVFHSRDVELTEKLDCSSAVALLGFNFILAILRAFSVRD 131
           +        +  +++N+WFWS VFH+RD +LTEK+D   A A++  +  L  +R   ++ 
Sbjct: 137 HTCMA----FAWVSLNAWFWSTVFHTRDTDLTEKMDYFCASAVILHSVYLCCVRTVGLQH 192

Query: 132 EAARVMVAAPLIAFVTTHILYLNFYKLDHGLNMKVCLAMGVAQLLIWAIWAGVTRH--PS 189
            +      A L+  +T HI YL+    D+G NM   +A+G+  L  W +W    R   P 
Sbjct: 193 PSVASAFGALLLLLLTGHISYLSLVHFDYGYNMMANVAIGLVNLAWWLVWCLRNRQRLPH 252

Query: 190 RWKLWLVVVGEGLAMLLQIYDFPPYRGFVDAHALYHAANIPLTYLWWSFIRDDS 243
             +  +VVV      LL++ DFPP    +DAHA++H + IP+  L++ F+ DDS
Sbjct: 253 TRRCMVVVVLLQGLSLLELLDFPPLFWVLDAHAIWHISTIPVHTLFFRFLEDDS 306

Involved in the lipid remodeling steps of GPI-anchor maturation. Lipid remodeling steps consist in the generation of 2 saturated fatty chains at the sn-2 position of GPI-anchors proteins. Required for phospholipase A2 activity that removes an acyl-chain at the sn-2 position of GPI-anchors during the remodeling of GPI.

Mus musculus (taxid: 10090)

>sp|Q7K0P4|PGAP3_DROME Post-GPI attachment to proteins factor 3 OS=Drosophila melanogaster GN=CG3271 PE=1 SV=2

 Score =  122 bits (307), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 71/225 (31%), Positives = 119/225 (52%), Gaps = 13/225 (5%)

Query: 17  KYHGKWPFRRVYGIQVEPVAVALSALNLSIQFHGWMSFFILLYYKLPLRPDKKTYYEYTG 76
           +++GKWPF R+ G+Q EP +V  S LN  +         +L  ++  +RPD   Y     
Sbjct: 96  QFYGKWPFLRLLGMQ-EPASVIFSCLNFVVHLR------LLRKFRREVRPDSPCYM---- 144

Query: 77  LWHIYGILAMNSWFWSAVFHSRDVELTEKLDCSSAVALLGFNFILAILRAFSVRDEAARV 136
           L HI+ + ++N W WSA+FH+RD  LTE LD + A +++  +  + ++R         R 
Sbjct: 145 LTHIFAVTSLNGWIWSAIFHTRDFPLTELLDYAFAYSIILCSLYVMVMRMLHRYSLFLRG 204

Query: 137 MVAAPLIAFVTTHILYLNFYKLDHGLNMKVCLAMGVAQLLIWAIWAGV--TRHPSRWKLW 194
           ++    +++   +  YL+  + ++  NM V +A GV   + W +W     TR P   ++ 
Sbjct: 205 VITLAFLSYYINYFAYLSVGRFNYAFNMMVNVATGVIAAVGWFVWCHFVRTRRPYFRRIL 264

Query: 195 LVVVGEGLAMLLQIYDFPPYRGFVDAHALYHAANIPLTYLWWSFI 239
              +   LAM L++ DFPP    +DAHAL+H A IPL  L++  +
Sbjct: 265 RFYILMALAMSLELLDFPPILWILDAHALWHLATIPLASLYYECV 309

Involved in the lipid remodeling steps of GPI-anchor maturation.

Drosophila melanogaster (taxid: 7227)

>sp|Q9P6N9|PER1_SCHPO Protein PER1 homolog OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC823.07 PE=3 SV=1

 Score =  120 bits (301), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 80/242 (33%), Positives = 122/242 (50%), Gaps = 24/242 (9%)

Query: 17  KYHGKWPFRRVYGIQVEPVAVALSALNLSIQFHGWMSFFILLYYKLPLR--PDKKTYYEY 74
           +YHGKW F RV+GIQ E  +V  S LN  I ++G         Y +  R  PD+      
Sbjct: 91  QYHGKWYFIRVFGIQ-ELFSVFFSMLNFMIHYNG---------YHIMRRCIPDEHPAKRL 140

Query: 75  TGLWHIYGILAMNSWFWSAVFHSRDVELTEKLDCSSAVALLGFNFILAILRAFSVRDEAA 134
              W I G   MN+W WS+VFH RD  +TEKLD  SA A + F     ++    +     
Sbjct: 141 CLSWAIVG---MNAWVWSSVFHIRDTPITEKLDYFSAGAFVLFGSYCTLILMLRLDQLPG 197

Query: 135 RVM----VAAPLIAFVTTHILYLNFYKLDHGLNMKVCLAMGVAQLLIWAIWAGVTRHP-- 188
             +    +    IA    H+ YL+FY  D+G NMK  +A+G+ Q ++W  ++   R+   
Sbjct: 198 GKLLCWIIGVIFIAAFIAHVSYLSFYSFDYGYNMKANVAVGLVQNILWYYYSWSNRNSGL 257

Query: 189 --SRWKLWLVVVGEGLAMLLQIYDFPPYRGFVDAHALYHAANIPLTYLWWSFIRDDSEFR 246
             +RW  + +V    LA  L+++DF P    +DAHAL+H + +P+T+  + F+     + 
Sbjct: 258 YWTRWPAY-IVTSLMLATSLELFDFSPIANLIDAHALWHLSTVPITHYLYGFVVRKCSYD 316

Query: 247 TT 248
            T
Sbjct: 317 LT 318

Involved in the lipid remodeling steps of GPI-anchor maturation. Lipid remodeling steps consist in the generation of 2 saturated fatty chains at the sn-2 position of GPI-anchors proteins. Required for phospholipase A2 activity that removes an acyl-chain at the sn-2 position of GPI-anchors during the remodeling of GPI. Required for efficient transport of GPI-anchor proteins.

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

>sp|Q96FM1|PGAP3_HUMAN Post-GPI attachment to proteins factor 3 OS=Homo sapiens GN=PGAP3 PE=2 SV=2

 Score =  116 bits (290), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 76/234 (32%), Positives = 121/234 (51%), Gaps = 13/234 (5%)

Query: 12  GDKPVKYHGKWPFRRVYGIQVEPVAVALSALNLSIQFHGWMSFFILLYYKLPLRPDKKTY 71
           G K  ++HGKWPF R    Q EP +   S LN      G  S  +L  Y+  +      Y
Sbjct: 84  GHKVPQFHGKWPFSRFLFFQ-EPASAVASFLN------GLASLVMLCRYRTFVPASSPMY 136

Query: 72  YEYTGLWHIYGILAMNSWFWSAVFHSRDVELTEKLDCSSAVALLGFNFILAILRAFSVRD 131
           +        +  +++N+WFWS VFH+RD +LTEK+D   A  ++  +  L  +R   ++ 
Sbjct: 137 HTCVA----FAWVSLNAWFWSTVFHTRDTDLTEKMDYFCASTVILHSIYLCCVRTVGLQH 192

Query: 132 EAARVMVAAPLIAFVTTHILYLNFYKLDHGLNMKVCLAMGVAQLLIWAIWA--GVTRHPS 189
            A      A L+  +T H+ YL+  + D+G N+   +A+G+  ++ W  W      R P 
Sbjct: 193 PAVVSAFRALLLLMLTVHVSYLSLIRFDYGYNLVANVAIGLVNVVWWLAWCLWNQRRLPH 252

Query: 190 RWKLWLVVVGEGLAMLLQIYDFPPYRGFVDAHALYHAANIPLTYLWWSFIRDDS 243
             K  +VV+      LL++ DFPP    +DAHA++H + IP+  L++SF+ DDS
Sbjct: 253 VRKCVVVVLLLQGLSLLELLDFPPLFWVLDAHAIWHISTIPVHVLFFSFLEDDS 306

Involved in the lipid remodeling steps of GPI-anchor maturation. Lipid remodeling steps consist in the generation of 2 saturated fatty chains at the sn-2 position of GPI-anchors proteins. Required for phospholipase A2 activity that removes an acyl-chain at the sn-2 position of GPI-anchors during the remodeling of GPI.

Homo sapiens (taxid: 9606)

>sp|A7YWP2|PGAP3_BOVIN Post-GPI attachment to proteins factor 3 OS=Bos taurus GN=PGAP3 PE=2 SV=1

 Score =  115 bits (289), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 79/235 (33%), Positives = 119/235 (50%), Gaps = 16/235 (6%)

Query: 12  GDKPVKYHGKWPFRRVYGIQVEPVAVALSALNLSIQFHGWMSFFILLYYKLPLRPDKKTY 71
           G K  ++HGKWPF R    Q EP +   S LN      G  S  +L  Y+  +      Y
Sbjct: 84  GQKVPQFHGKWPFSRFLCFQ-EPASAVASFLN------GLASLVMLCRYRTSVPASSPMY 136

Query: 72  YEYTGLWHIYGILAMNSWFWSAVFHSRDVELTEKLDCSSAVALLGFNFILAILRAFSVRD 131
                    +  +++N+WFWS VFH+RD +LTEK+D   A  ++  +  L  +R   ++ 
Sbjct: 137 PTCVA----FAWVSLNAWFWSTVFHTRDTDLTEKMDYFCASTVILHSIYLCCVRTVGLQH 192

Query: 132 EAARVMVAAPLIAFVTTHILYLNFYKLDHGLNMKVCLAMGV---AQLLIWAIWAGVTRHP 188
            A      A L+  +T H+ YL+    D+G NM   +A+G+   A  L W +W    R P
Sbjct: 193 PAMASAFRALLLLLLTAHVSYLSLIHFDYGYNMAANVAIGLLNAAWWLAWCLWN--QRLP 250

Query: 189 SRWKLWLVVVGEGLAMLLQIYDFPPYRGFVDAHALYHAANIPLTYLWWSFIRDDS 243
              K   VV+      LL++ DFPP    +DAHA++H + IP+  L++SF+ DDS
Sbjct: 251 HVHKCVAVVLLLQGLSLLELLDFPPLFWVLDAHAIWHISTIPVHVLFFSFLEDDS 305

Involved in the lipid remodeling steps of GPI-anchor maturation. Lipid remodeling steps consist in the generation of 2 saturated fatty chains at the sn-2 position of GPI-anchors proteins. Required for phospholipase A2 activity that removes an acyl-chain at the sn-2 position of GPI-anchors during the remodeling of GPI.

Bos taurus (taxid: 9913)

>sp|A2V7M9|PGAP3_CRIGR Post-GPI attachment to proteins factor 3 OS=Cricetulus griseus GN=PGAP3 PE=2 SV=1

 Score =  114 bits (286), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 75/234 (32%), Positives = 117/234 (50%), Gaps = 13/234 (5%)

Query: 12  GDKPVKYHGKWPFRRVYGIQVEPVAVALSALNLSIQFHGWMSFFILLYYKLPLRPDKKTY 71
           G +  ++HGKWPF R   IQ EP +   S LN      G  S  +L  Y+  +      Y
Sbjct: 84  GHRVPQFHGKWPFSRFLFIQ-EPASAVASLLN------GLASLVMLCRYRASVPASSPMY 136

Query: 72  YEYTGLWHIYGILAMNSWFWSAVFHSRDVELTEKLDCSSAVALLGFNFILAILRAFSVRD 131
           +        +  +++N+WFWS VFH+RD +LTEK+D   A A++  +  L  +R   ++ 
Sbjct: 137 HTCMA----FAWVSLNAWFWSTVFHTRDTDLTEKMDYFCASAVILHSIYLCCVRTVGLQH 192

Query: 132 EAARVMVAAPLIAFVTTHILYLNFYKLDHGLNMKVCLAMGVAQLLIWAIWA--GVTRHPS 189
            +      A L+  +  H  YL+  + D+  NM   +A+G+  L  W  W      R P 
Sbjct: 193 PSVARAFGATLLLMLLLHTSYLSLVRFDYSYNMMANVAIGLVNLAWWLAWCLRNHRRLPH 252

Query: 190 RWKLWLVVVGEGLAMLLQIYDFPPYRGFVDAHALYHAANIPLTYLWWSFIRDDS 243
             K   VV+      LL++ DFPP    +DAHA++H + IP+  L++ F+ DDS
Sbjct: 253 TRKCVAVVLLLQGLSLLELLDFPPLFWVLDAHAIWHISTIPVHVLFFRFLEDDS 306

Involved in the lipid remodeling steps of GPI-anchor maturation. Lipid remodeling steps consist in the generation of 2 saturated fatty chains at the sn-2 position of GPI-anchors proteins. Required for phospholipase A2 activity that removes an acyl-chain at the sn-2 position of GPI-anchors during the remodeling of GPI.

Cricetulus griseus (taxid: 10029)

>sp|P25625|PER1_YEAST Protein PER1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PER1 PE=1 SV=1

 Score = 68.9 bits (167), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 72/267 (26%), Positives = 122/267 (45%), Gaps = 38/267 (14%)

Query: 4   REGEREKVGDKPVKYHGKWPFRRVYGIQVEPVAVALSALNLSIQFHGWMSFFILLYYKLP 63
           R  E E++     ++HGKWPF RV G Q E  +   S  N    + G++ F  ++  +  
Sbjct: 91  RIDEEEEI----YQFHGKWPFLRVLGTQ-EFFSTIFSIGNFIPHYKGFVKFSRIIREEGD 145

Query: 64  LRPDKKTYYEYTGLW-HIYGILA-MNSWFWSAVFHSRDVELTEKLD--CSSAVALLGFNF 119
            R           +W ++Y  +A M +W  S+VFH RD+ +TEKLD   +    L GF+ 
Sbjct: 146 RRRKNS---RSILIWNYLYVTVAGMLAWTASSVFHCRDLIITEKLDYFFAGLTVLTGFHA 202

Query: 120 ILAILRAFSVRDEAARVMVAAPLIAFVTTHILYLNFYKLDHGLNMKVCLAMGVAQLLIWA 179
           I A + +  +  + A+   A+ + A    HIL L +    +  NM+  +  GV Q ++  
Sbjct: 203 IFARMTSMFLYPKIAQAFTAS-VAAIFALHILRL-YVDWSYTYNMRFNIFFGVLQYILLI 260

Query: 180 IWAGVTRHP-SRWKLW-----------------------LVVVGEGLAMLLQIYDFPPYR 215
           + +    H   + KL                        L+V+   +AM L+++DF  Y 
Sbjct: 261 MLSCQNYHALQKQKLMGEFKKTAYSSFKRQIFKLCVIPILLVIVTTMAMSLELFDFFSYE 320

Query: 216 GFVDAHALYHAANIPLTYLWWSFIRDD 242
             +DAHAL+H   I  +++ + F  +D
Sbjct: 321 WQIDAHALWHLCTIWPSWVLYDFFLED 347

Involved in the lipid remodeling steps of GPI-anchor maturation. Lipid remodeling steps consist in the generation of 2 saturated fatty chains at the sn-2 position of GPI-anchors proteins. Required for phospholipase A2 activity that removes an acyl-chain at the sn-2 position of GPI-anchors during the remodeling of GPI. Required for efficient transport of GPI-anchor proteins.

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	255
224120128	348	predicted protein [Populus trichocarpa]	0.996	0.729	0.827	1e-122
225462155	379	PREDICTED: post-GPI attachment to protei	0.996	0.670	0.811	1e-118
225462157	342	PREDICTED: post-GPI attachment to protei	0.996	0.742	0.811	1e-118
225455483	342	PREDICTED: post-GPI attachment to protei	0.996	0.742	0.823	1e-118
147779235	342	hypothetical protein VITISV_034376 [Viti	0.996	0.742	0.807	1e-117
82400132	342	Per1-like family protein [Solanum tubero	0.996	0.742	0.792	1e-117
82621128	342	Per1-like family protein [Solanum tubero	0.996	0.742	0.792	1e-116
356561714	342	PREDICTED: post-GPI attachment to protei	0.996	0.742	0.8	1e-116
171191049	307	PERLD1 [Solanum commersonii]	0.996	0.827	0.788	1e-116
169668008	342	PERLD1 [Glycine max]	0.996	0.742	0.8	1e-116

>gi|224120128|ref|XP_002318250.1| predicted protein [Populus trichocarpa] gi|118489817|gb|ABK96708.1| unknown [Populus trichocarpa x Populus deltoides] gi|222858923|gb|EEE96470.1| predicted protein [Populus trichocarpa]

 Score =  442 bits (1138), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 211/255 (82%), Positives = 235/255 (92%), Gaps = 1/255 (0%)

Query: 1   MLAREGEREKVGDKPVKYHGKWPFRRVYGIQVEPVAVALSALNLSIQFHGWMSFFILLYY 60
           ML RE EREK+G KPVKYHGKWPF R YG Q EPV+VALSALNL+IQFHGW+SFFIL+YY
Sbjct: 95  MLVREEEREKLGGKPVKYHGKWPFHRAYGFQ-EPVSVALSALNLAIQFHGWVSFFILIYY 153

Query: 61  KLPLRPDKKTYYEYTGLWHIYGILAMNSWFWSAVFHSRDVELTEKLDCSSAVALLGFNFI 120
           KL L P KKTYYEYTGLWHIYGIL+MNSWFWSAVFHSRDVELTEKLDCSSAVALLGF+ I
Sbjct: 154 KLQLTPSKKTYYEYTGLWHIYGILSMNSWFWSAVFHSRDVELTEKLDCSSAVALLGFSLI 213

Query: 121 LAILRAFSVRDEAARVMVAAPLIAFVTTHILYLNFYKLDHGLNMKVCLAMGVAQLLIWAI 180
           LAILRAFS+RDEAARVMV+AP+IAFVTTHILYLNFY LD+ LNMKVC+AMGVAQLLIWA+
Sbjct: 214 LAILRAFSMRDEAARVMVSAPIIAFVTTHILYLNFYNLDYDLNMKVCVAMGVAQLLIWAV 273

Query: 181 WAGVTRHPSRWKLWLVVVGEGLAMLLQIYDFPPYRGFVDAHALYHAANIPLTYLWWSFIR 240
           WAGVT HPSR KLW+ VVG GLA+LL+IYDFPPY+GFVDAHAL+HA  IPLTYLWWSF++
Sbjct: 274 WAGVTNHPSRLKLWVAVVGGGLAILLEIYDFPPYQGFVDAHALWHATTIPLTYLWWSFVK 333

Query: 241 DDSEFRTTALLKKPK 255
           DD+EFRT++LLKK +
Sbjct: 334 DDAEFRTSSLLKKAR 348

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225462155|ref|XP_002266197.1| PREDICTED: post-GPI attachment to proteins factor 3 isoform 1 [Vitis vinifera] gi|296082755|emb|CBI21760.3| unnamed protein product [Vitis vinifera]

 Score =  430 bits (1105), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 207/255 (81%), Positives = 232/255 (90%), Gaps = 1/255 (0%)

Query: 1   MLAREGEREKVGDKPVKYHGKWPFRRVYGIQVEPVAVALSALNLSIQFHGWMSFFILLYY 60
           ML RE ERE +G+ PVKYHGKWPF+RVYGIQ EP +VALSALNL++QFHGW+SFFILL Y
Sbjct: 126 MLDREKEREALGNGPVKYHGKWPFKRVYGIQ-EPASVALSALNLAMQFHGWLSFFILLNY 184

Query: 61  KLPLRPDKKTYYEYTGLWHIYGILAMNSWFWSAVFHSRDVELTEKLDCSSAVALLGFNFI 120
           KLPL+P+KK YYEYT LWHIYG+L+MNSWFWSAVFHSRDV+LTEKLD SSAVALLGF+ I
Sbjct: 185 KLPLKPNKKAYYEYTCLWHIYGLLSMNSWFWSAVFHSRDVDLTEKLDYSSAVALLGFSLI 244

Query: 121 LAILRAFSVRDEAARVMVAAPLIAFVTTHILYLNFYKLDHGLNMKVCLAMGVAQLLIWAI 180
           LAILR+F+VR EAARVMV+APL+AFVTTHILYLNFYK D+G NMKVC+ MGVAQLLIWAI
Sbjct: 245 LAILRSFNVRVEAARVMVSAPLLAFVTTHILYLNFYKFDYGWNMKVCVVMGVAQLLIWAI 304

Query: 181 WAGVTRHPSRWKLWLVVVGEGLAMLLQIYDFPPYRGFVDAHALYHAANIPLTYLWWSFIR 240
           WAGVTRHPSRWKLW VVVG GLAMLL+IYDFPPY GFVDAHAL+HA  IPLTY+WWSFI+
Sbjct: 305 WAGVTRHPSRWKLWTVVVGGGLAMLLEIYDFPPYEGFVDAHALWHATTIPLTYIWWSFIK 364

Query: 241 DDSEFRTTALLKKPK 255
           DD+EF+T  LLKK K
Sbjct: 365 DDAEFQTANLLKKVK 379

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225462157|ref|XP_002266274.1| PREDICTED: post-GPI attachment to proteins factor 3 isoform 2 [Vitis vinifera]

 Score =  429 bits (1103), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 207/255 (81%), Positives = 232/255 (90%), Gaps = 1/255 (0%)

Query: 1   MLAREGEREKVGDKPVKYHGKWPFRRVYGIQVEPVAVALSALNLSIQFHGWMSFFILLYY 60
           ML RE ERE +G+ PVKYHGKWPF+RVYGIQ EP +VALSALNL++QFHGW+SFFILL Y
Sbjct: 89  MLDREKEREALGNGPVKYHGKWPFKRVYGIQ-EPASVALSALNLAMQFHGWLSFFILLNY 147

Query: 61  KLPLRPDKKTYYEYTGLWHIYGILAMNSWFWSAVFHSRDVELTEKLDCSSAVALLGFNFI 120
           KLPL+P+KK YYEYT LWHIYG+L+MNSWFWSAVFHSRDV+LTEKLD SSAVALLGF+ I
Sbjct: 148 KLPLKPNKKAYYEYTCLWHIYGLLSMNSWFWSAVFHSRDVDLTEKLDYSSAVALLGFSLI 207

Query: 121 LAILRAFSVRDEAARVMVAAPLIAFVTTHILYLNFYKLDHGLNMKVCLAMGVAQLLIWAI 180
           LAILR+F+VR EAARVMV+APL+AFVTTHILYLNFYK D+G NMKVC+ MGVAQLLIWAI
Sbjct: 208 LAILRSFNVRVEAARVMVSAPLLAFVTTHILYLNFYKFDYGWNMKVCVVMGVAQLLIWAI 267

Query: 181 WAGVTRHPSRWKLWLVVVGEGLAMLLQIYDFPPYRGFVDAHALYHAANIPLTYLWWSFIR 240
           WAGVTRHPSRWKLW VVVG GLAMLL+IYDFPPY GFVDAHAL+HA  IPLTY+WWSFI+
Sbjct: 268 WAGVTRHPSRWKLWTVVVGGGLAMLLEIYDFPPYEGFVDAHALWHATTIPLTYIWWSFIK 327

Query: 241 DDSEFRTTALLKKPK 255
           DD+EF+T  LLKK K
Sbjct: 328 DDAEFQTANLLKKVK 342

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225455483|ref|XP_002280194.1| PREDICTED: post-GPI attachment to proteins factor 3 [Vitis vinifera] gi|147785290|emb|CAN61923.1| hypothetical protein VITISV_036651 [Vitis vinifera] gi|297741118|emb|CBI31849.3| unnamed protein product [Vitis vinifera]

 Score =  428 bits (1101), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 210/255 (82%), Positives = 236/255 (92%), Gaps = 1/255 (0%)

Query: 1   MLAREGEREKVGDKPVKYHGKWPFRRVYGIQVEPVAVALSALNLSIQFHGWMSFFILLYY 60
           MLARE ERE++GDKPVKYHGKWPFRRVYGIQ EPV+VAL+ LNL++QFHGW+SF ILLYY
Sbjct: 89  MLAREEEREELGDKPVKYHGKWPFRRVYGIQ-EPVSVALATLNLAMQFHGWVSFLILLYY 147

Query: 61  KLPLRPDKKTYYEYTGLWHIYGILAMNSWFWSAVFHSRDVELTEKLDCSSAVALLGFNFI 120
           KLPLRPDKKT+YEYTGLWHIYGILAMN+WFW+AVFHSRDV+LTEKLD SS VALLGF  I
Sbjct: 148 KLPLRPDKKTFYEYTGLWHIYGILAMNAWFWNAVFHSRDVDLTEKLDYSSGVALLGFTLI 207

Query: 121 LAILRAFSVRDEAARVMVAAPLIAFVTTHILYLNFYKLDHGLNMKVCLAMGVAQLLIWAI 180
           LAILRAF+VRDEAARVM+AAPL+AFVTTHILYLNFYKLD+GLNMKVCL MG+AQLL+W +
Sbjct: 208 LAILRAFNVRDEAARVMIAAPLMAFVTTHILYLNFYKLDYGLNMKVCLTMGIAQLLLWTV 267

Query: 181 WAGVTRHPSRWKLWLVVVGEGLAMLLQIYDFPPYRGFVDAHALYHAANIPLTYLWWSFIR 240
           WAGVT HPSRWKLW+VVVG  LAM L+IYDFPPY GFVDAHA++HA  IP TYLWWSF++
Sbjct: 268 WAGVTHHPSRWKLWVVVVGGALAMFLEIYDFPPYWGFVDAHAVWHALAIPFTYLWWSFVK 327

Query: 241 DDSEFRTTALLKKPK 255
           DDSEFRT+AL+KK K
Sbjct: 328 DDSEFRTSALMKKVK 342

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147779235|emb|CAN65586.1| hypothetical protein VITISV_034376 [Vitis vinifera]

 Score =  428 bits (1100), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 206/255 (80%), Positives = 231/255 (90%), Gaps = 1/255 (0%)

Query: 1   MLAREGEREKVGDKPVKYHGKWPFRRVYGIQVEPVAVALSALNLSIQFHGWMSFFILLYY 60
           ML RE ERE +G+ PVKYHGKWPF+RVYGIQ EP +VALSALNL++QFHGW+SFFILL Y
Sbjct: 89  MLDREKEREALGNGPVKYHGKWPFKRVYGIQ-EPASVALSALNLAMQFHGWLSFFILLNY 147

Query: 61  KLPLRPDKKTYYEYTGLWHIYGILAMNSWFWSAVFHSRDVELTEKLDCSSAVALLGFNFI 120
           KLPL+P+KK YYEYT LWHIYG+L+MNSWFWSAVFHSRDV+LTEKLD SSAVALLGF+ I
Sbjct: 148 KLPLKPNKKAYYEYTCLWHIYGLLSMNSWFWSAVFHSRDVDLTEKLDYSSAVALLGFSLI 207

Query: 121 LAILRAFSVRDEAARVMVAAPLIAFVTTHILYLNFYKLDHGLNMKVCLAMGVAQLLIWAI 180
           LAILR+F+VR EAARVMV+APL+AFVTTHILYLNFYK D+G NMKVC+ MGVAQLLIW I
Sbjct: 208 LAILRSFNVRVEAARVMVSAPLLAFVTTHILYLNFYKFDYGWNMKVCVVMGVAQLLIWTI 267

Query: 181 WAGVTRHPSRWKLWLVVVGEGLAMLLQIYDFPPYRGFVDAHALYHAANIPLTYLWWSFIR 240
           WAGVTRHPSRWKLW VVVG GLAMLL+IYDFPPY GFVDAHAL+HA  IPLTY+WWSFI+
Sbjct: 268 WAGVTRHPSRWKLWTVVVGGGLAMLLEIYDFPPYEGFVDAHALWHATTIPLTYIWWSFIK 327

Query: 241 DDSEFRTTALLKKPK 255
           DD+EF+T  LLKK K
Sbjct: 328 DDAEFQTANLLKKVK 342

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|82400132|gb|ABB72805.1| Per1-like family protein [Solanum tuberosum]

 Score =  426 bits (1096), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 202/255 (79%), Positives = 229/255 (89%), Gaps = 1/255 (0%)

Query: 1   MLAREGEREKVGDKPVKYHGKWPFRRVYGIQVEPVAVALSALNLSIQFHGWMSFFILLYY 60
           MLARE ER+KVG KPVKYHGKWPF+RV GIQ EPV+VALSALNL++QFHGW+SFFI + Y
Sbjct: 89  MLAREKERKKVGLKPVKYHGKWPFQRVNGIQ-EPVSVALSALNLAMQFHGWVSFFIFVNY 147

Query: 61  KLPLRPDKKTYYEYTGLWHIYGILAMNSWFWSAVFHSRDVELTEKLDCSSAVALLGFNFI 120
           KLP RP++K +YEYTGLWHIY I AMNSWFWS VFHSRDV LTEKLD SSAVALLGF+ I
Sbjct: 148 KLPFRPNRKPFYEYTGLWHIYAIFAMNSWFWSVVFHSRDVNLTEKLDYSSAVALLGFSLI 207

Query: 121 LAILRAFSVRDEAARVMVAAPLIAFVTTHILYLNFYKLDHGLNMKVCLAMGVAQLLIWAI 180
           LA+LR F+V DEAARVMV+APL+AFVTTHILYLN Y+LD+GLNMKVCL MG+ QL++WA+
Sbjct: 208 LAVLRVFNVTDEAARVMVSAPLVAFVTTHILYLNCYQLDYGLNMKVCLGMGILQLILWAV 267

Query: 181 WAGVTRHPSRWKLWLVVVGEGLAMLLQIYDFPPYRGFVDAHALYHAANIPLTYLWWSFIR 240
           WAGVTRHPSRWKLW+VV+G  LA LL+IYDFPPYRGFVDAHAL+HA  IPLTYLWWSF+R
Sbjct: 268 WAGVTRHPSRWKLWVVVIGGALAALLEIYDFPPYRGFVDAHALWHATTIPLTYLWWSFVR 327

Query: 241 DDSEFRTTALLKKPK 255
           DDSEFRTT L+KK K
Sbjct: 328 DDSEFRTTTLIKKAK 342

Source: Solanum tuberosum

Species: Solanum tuberosum

Genus: Solanum

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|82621128|gb|ABB86252.1| Per1-like family protein [Solanum tuberosum]

 Score =  424 bits (1090), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 202/255 (79%), Positives = 228/255 (89%), Gaps = 1/255 (0%)

Query: 1   MLAREGEREKVGDKPVKYHGKWPFRRVYGIQVEPVAVALSALNLSIQFHGWMSFFILLYY 60
           MLARE ER+KVG KPVKYHGKWPF+RV GIQ EPV+VALSALNL++QFHGW+SFFI + Y
Sbjct: 89  MLAREKERKKVGLKPVKYHGKWPFQRVNGIQ-EPVSVALSALNLAMQFHGWVSFFIFVNY 147

Query: 61  KLPLRPDKKTYYEYTGLWHIYGILAMNSWFWSAVFHSRDVELTEKLDCSSAVALLGFNFI 120
           KLP RP++K +YEYTGLWHIY I AMNSWFWS VFHSRDV LTEKLD SSAVALLGF  I
Sbjct: 148 KLPFRPNRKPFYEYTGLWHIYAIFAMNSWFWSVVFHSRDVYLTEKLDYSSAVALLGFPLI 207

Query: 121 LAILRAFSVRDEAARVMVAAPLIAFVTTHILYLNFYKLDHGLNMKVCLAMGVAQLLIWAI 180
           LA+LR F+V DEAARVMV+APL+AFVTTHILYLN Y+LD+GLNMKVCL MG+ QL++WA+
Sbjct: 208 LAVLRVFNVTDEAARVMVSAPLVAFVTTHILYLNCYQLDYGLNMKVCLGMGILQLILWAV 267

Query: 181 WAGVTRHPSRWKLWLVVVGEGLAMLLQIYDFPPYRGFVDAHALYHAANIPLTYLWWSFIR 240
           WAGVTRHPSRWKLW+VV+G  LA LL+IYDFPPYRGFVDAHAL+HA  IPLTYLWWSF+R
Sbjct: 268 WAGVTRHPSRWKLWVVVIGGALAALLEIYDFPPYRGFVDAHALWHATTIPLTYLWWSFVR 327

Query: 241 DDSEFRTTALLKKPK 255
           DDSEFRTT L+KK K
Sbjct: 328 DDSEFRTTTLIKKAK 342

Source: Solanum tuberosum

Species: Solanum tuberosum

Genus: Solanum

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356561714|ref|XP_003549124.1| PREDICTED: post-GPI attachment to proteins factor 3-like [Glycine max]

 Score =  424 bits (1089), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 204/255 (80%), Positives = 228/255 (89%), Gaps = 1/255 (0%)

Query: 1   MLAREGEREKVGDKPVKYHGKWPFRRVYGIQVEPVAVALSALNLSIQFHGWMSFFILLYY 60
           ML+RE ER K+GDKPVKYHGKWPF RVYGIQ EPVAVALSA+NL+IQFHGW+SFFIL+YY
Sbjct: 89  MLSREEERTKLGDKPVKYHGKWPFHRVYGIQ-EPVAVALSAVNLAIQFHGWVSFFILVYY 147

Query: 61  KLPLRPDKKTYYEYTGLWHIYGILAMNSWFWSAVFHSRDVELTEKLDCSSAVALLGFNFI 120
           KLPLRPDKKTYYEYTGLWHIYGIL+MN+W WSAVFHSR VELTEKLD SSAVALLGF  I
Sbjct: 148 KLPLRPDKKTYYEYTGLWHIYGILSMNAWLWSAVFHSRAVELTEKLDFSSAVALLGFTLI 207

Query: 121 LAILRAFSVRDEAARVMVAAPLIAFVTTHILYLNFYKLDHGLNMKVCLAMGVAQLLIWAI 180
           LAILRAF+VRDEA RVM++APL+AFVTTHI+YLNFY+L +GLN  VC  M V QLLIWAI
Sbjct: 208 LAILRAFNVRDEATRVMISAPLLAFVTTHIMYLNFYELAYGLNRIVCTGMVVVQLLIWAI 267

Query: 181 WAGVTRHPSRWKLWLVVVGEGLAMLLQIYDFPPYRGFVDAHALYHAANIPLTYLWWSFIR 240
           WAG + HP+RWKLW VVVG GLAM+L+ YDFPPY G+VDAHAL+HA +IPLT+ WW FIR
Sbjct: 268 WAGASNHPARWKLWAVVVGGGLAMVLETYDFPPYMGYVDAHALWHATSIPLTFFWWGFIR 327

Query: 241 DDSEFRTTALLKKPK 255
           DD+EFRTTALLKK K
Sbjct: 328 DDAEFRTTALLKKVK 342

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|171191049|gb|ACB45085.1| PERLD1 [Solanum commersonii]

 Score =  424 bits (1089), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 201/255 (78%), Positives = 229/255 (89%), Gaps = 1/255 (0%)

Query: 1   MLAREGEREKVGDKPVKYHGKWPFRRVYGIQVEPVAVALSALNLSIQFHGWMSFFILLYY 60
           MLARE ER+KVG KPVKYHGKWPF+RV GIQ EPV+VALSALNL++QFHGW+SFFI + Y
Sbjct: 54  MLAREKERKKVGLKPVKYHGKWPFQRVNGIQ-EPVSVALSALNLAMQFHGWVSFFIFVNY 112

Query: 61  KLPLRPDKKTYYEYTGLWHIYGILAMNSWFWSAVFHSRDVELTEKLDCSSAVALLGFNFI 120
           KLP  P++K +YEYTGLWHIY I AMNSWFWS VFHSRDV+LTEKLD SSAVALLGF+ I
Sbjct: 113 KLPFMPNRKPFYEYTGLWHIYAIFAMNSWFWSVVFHSRDVDLTEKLDYSSAVALLGFSLI 172

Query: 121 LAILRAFSVRDEAARVMVAAPLIAFVTTHILYLNFYKLDHGLNMKVCLAMGVAQLLIWAI 180
           LA+LR FSV DEAARVMV+APL+AFVTTHILYLN Y+LD+GLNMKVCL MG+ QL++WA+
Sbjct: 173 LAVLRVFSVTDEAARVMVSAPLVAFVTTHILYLNCYQLDYGLNMKVCLGMGILQLILWAV 232

Query: 181 WAGVTRHPSRWKLWLVVVGEGLAMLLQIYDFPPYRGFVDAHALYHAANIPLTYLWWSFIR 240
           WAGVTRHPSRWKLW+VV+G  LA LL+IYDFPPYRGFVDAHAL+HA  IPLTYLWW+F+R
Sbjct: 233 WAGVTRHPSRWKLWVVVIGGALAALLEIYDFPPYRGFVDAHALWHATTIPLTYLWWNFVR 292

Query: 241 DDSEFRTTALLKKPK 255
           DDSEFRTT L+KK K
Sbjct: 293 DDSEFRTTTLIKKAK 307

Source: Solanum commersonii

Species: Solanum commersonii

Genus: Solanum

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|169668008|gb|ACA64424.1| PERLD1 [Glycine max]

 Score =  423 bits (1088), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 204/255 (80%), Positives = 229/255 (89%), Gaps = 1/255 (0%)

Query: 1   MLAREGEREKVGDKPVKYHGKWPFRRVYGIQVEPVAVALSALNLSIQFHGWMSFFILLYY 60
           MLARE ER K+GDKPVKYHGKWPFRRVYGIQ EPVAVALSA+NL++QFHGW+SFFIL+YY
Sbjct: 89  MLAREEERTKLGDKPVKYHGKWPFRRVYGIQ-EPVAVALSAVNLAMQFHGWVSFFILVYY 147

Query: 61  KLPLRPDKKTYYEYTGLWHIYGILAMNSWFWSAVFHSRDVELTEKLDCSSAVALLGFNFI 120
           KL LRPDKKTYYEYTGLWHIYGIL+MN+W WSAVFHSR VELTEKLD SSAVALLGF+ I
Sbjct: 148 KLTLRPDKKTYYEYTGLWHIYGILSMNAWLWSAVFHSRAVELTEKLDFSSAVALLGFSLI 207

Query: 121 LAILRAFSVRDEAARVMVAAPLIAFVTTHILYLNFYKLDHGLNMKVCLAMGVAQLLIWAI 180
           LAILRAF+VRDEA RVM++APLIAFVTTHI+YLNFY+L +GLN  VC  M V QLLIWAI
Sbjct: 208 LAILRAFNVRDEATRVMISAPLIAFVTTHIMYLNFYELAYGLNRIVCTGMVVVQLLIWAI 267

Query: 181 WAGVTRHPSRWKLWLVVVGEGLAMLLQIYDFPPYRGFVDAHALYHAANIPLTYLWWSFIR 240
           WAG + HP+RWKLW VVVG GLAM+L+ YDFPPY G+VDAHAL+HA +IPLT+ WW FIR
Sbjct: 268 WAGASNHPARWKLWAVVVGGGLAMVLETYDFPPYMGYVDAHALWHATSIPLTFFWWGFIR 327

Query: 241 DDSEFRTTALLKKPK 255
           DD+EFRTTA+LKK K
Sbjct: 328 DDAEFRTTAMLKKVK 342

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	255
TAIR|locus:2017968	342	AT1G16560 "AT1G16560" [Arabido	0.996	0.742	0.721	1.7e-105
ZFIN|ZDB-GENE-080204-27	316	zgc:171485 "zgc:171485" [Danio	0.835	0.674	0.375	9.2e-36
UNIPROTKB|Q68EV0	317	pgap3 "Post-GPI attachment to	0.862	0.694	0.376	3.2e-33
UNIPROTKB|Q0VFE3	316	pgap3 "Post-GPI attachment to	0.862	0.696	0.368	4.1e-33
UNIPROTKB|H9L1M1	229	PERLD1 "Uncharacterized protei	0.819	0.912	0.385	6e-32
MGI|MGI:2444461	320	Pgap3 "post-GPI attachment to	0.854	0.681	0.358	1.3e-31
UNIPROTKB|Q96FM1	320	PGAP3 "Post-GPI attachment to	0.850	0.678	0.344	1.8e-30
UNIPROTKB|A7YWP2	319	PGAP3 "Post-GPI attachment to	0.850	0.680	0.350	3e-30
UNIPROTKB|F1RWL4	320	PGAP3 "Uncharacterized protein	0.858	0.684	0.351	3.8e-30
POMBASE|SPAC823.07	331	SPAC823.07 "GPI-phospholipase	0.831	0.640	0.343	6.2e-30

TAIR|locus:2017968 AT1G16560 "AT1G16560" [Arabidopsis thaliana (taxid:3702)]

 Score = 1044 (372.6 bits), Expect = 1.7e-105, P = 1.7e-105
 Identities = 184/255 (72%), Positives = 221/255 (86%)

Query:     1 MLAREGEREKVGDKPVKYHGKWPFRRVYGIQVEPVAVALSALNLSIQFHGWMSFFILLYY 60
             M+ RE ERE +G  PVKYHGKWPF+RV GIQ EP +VA S LNL++ FHGW+SFFI++YY
Sbjct:    85 MVNRETERETLGQAPVKYHGKWPFKRVLGIQ-EPASVAFSVLNLAMHFHGWLSFFIMIYY 143

Query:    61 KLPLRPDKKTYYEYTGLWHIYGILAMNSWFWSAVFHSRDVELTEKLDCSSAVALLGFNFI 120
             KLPL+ D+  YYEY GLWHIYG+L+MNSWFWSAVFHSRDV+LTE+LD SSAVA+LGF+ I
Sbjct:   144 KLPLKQDRTAYYEYVGLWHIYGLLSMNSWFWSAVFHSRDVDLTERLDYSSAVAILGFSLI 203

Query:   121 LAILRAFSVRDEAARVMVAAPLIAFVTTHILYLNFYKLDHGLNMKVCLAMGVAQLLIWAI 180
             LAILR F +R EAARVMV+AP++AFVTTHILY+NFYKLD+G NM VC+AMGV+QL +WA 
Sbjct:   204 LAILRTFDIRVEAARVMVSAPILAFVTTHILYINFYKLDYGWNMIVCVAMGVSQLFLWAR 263

Query:   181 WAGVTRHPSRWKLWLVVVGEGLAMLLQIYDFPPYRGFVDAHALYHAANIPLTYLWWSFIR 240
             WA V+ HPS WKLW+VV+  GLAMLL+IYDFPPY G+ DAH+++HAA IPLT LWWSFIR
Sbjct:   264 WAAVSSHPSNWKLWVVVIAGGLAMLLEIYDFPPYEGYFDAHSIWHAATIPLTILWWSFIR 323

Query:   241 DDSEFRTTALLKKPK 255
             DD+EFRT++LLKK K
Sbjct:   324 DDAEFRTSSLLKKTK 338

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0006816 "calcium ion transport" evidence=RCA

GO:0006891 "intra-Golgi vesicle-mediated transport" evidence=RCA

GO:0006944 "cellular membrane fusion" evidence=RCA

GO:0007030 "Golgi organization" evidence=RCA

GO:0009651 "response to salt stress" evidence=RCA

ZFIN|ZDB-GENE-080204-27 zgc:171485 "zgc:171485" [Danio rerio (taxid:7955)]

 Score = 386 (140.9 bits), Expect = 9.2e-36, P = 9.2e-36
 Identities = 87/232 (37%), Positives = 129/232 (55%)

Query:    17 KYHGKWPFRRVYGIQVEPVAVALSALNLSIQFHGWMSFFILLYYKLPLRPDKKTYYEYTG 76
             ++HGKWPF R    + EP +   S LN      G     +LL Y+  +      Y+  T 
Sbjct:    85 QFHGKWPFARFLCFE-EPASALASLLN------GLACLLMLLRYRSAVPRQSPMYHTITA 137

Query:    77 LWHIYGILAMNSWFWSAVFHSRDVELTEKLD--CSSAVALLGFNFILAILRAFSVRDEAA 134
                 + ++++N+WFWS VFH+RD  LTEK+D  C+SAV L  ++  L  +R   +R  A 
Sbjct:   138 ----FSLVSLNAWFWSTVFHTRDTYLTEKMDYFCASAVIL--YSIYLCCVRTLGLRRPAI 191

Query:   135 RVMVAAPLIAFVTTHILYLNFYKLDHGLNMKVCLAMGVAQLLIWAIWAGVTRH--PSRWK 192
               MV   LI   T+H+ YL F   D+G NM    ++G+  LL W  W  + R   P  WK
Sbjct:   192 SSMVGVLLILAFTSHVSYLTFVSFDYGYNMAANASIGIINLLWWLCWCWLNRRILPYWWK 251

Query:   193 LWLVVVG-EGLAMLLQIYDFPPYRGFVDAHALYHAANIPLTYLWWSFIRDDS 243
               +VV+   GLA LL++ DFPP    +DAHA++H + +P+ +L++SF+ DDS
Sbjct:   252 CGMVVLLLHGLA-LLELLDFPPLFWVLDAHAVWHLSTVPVHFLFYSFLIDDS 302

GO:0031227 "intrinsic to endoplasmic reticulum membrane" evidence=ISS

GO:0016788 "hydrolase activity, acting on ester bonds" evidence=ISS

GO:0006505 "GPI anchor metabolic process" evidence=ISS

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0006506 "GPI anchor biosynthetic process" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0000139 "Golgi membrane" evidence=IEA

UNIPROTKB|Q68EV0 pgap3 "Post-GPI attachment to proteins factor 3" [Xenopus laevis (taxid:8355)]

 Score = 362 (132.5 bits), Expect = 3.2e-33, P = 3.2e-33
 Identities = 90/239 (37%), Positives = 129/239 (53%)

Query:    10 KVGDKPVKYHGKWPFRRVYGIQVEPVAVALSALNLSIQFHGWMSFFILLYYKLPLRPDKK 69
             K G +  ++HGKWPF R    Q EP +   S LN      G  S  +L  Y+  + P   
Sbjct:    77 KEGHEVPQFHGKWPFSRFLFFQ-EPASALASFLN------GVASLLMLFRYRSSV-PSSC 128

Query:    70 TYYEYTGLWHIYGILAMNSWFWSAVFHSRDVELTEKLD--CSSAVALLGFNFILAILRAF 127
               Y  T L   + ++++N+WFWS +FH+RD  LTEK+D  C+S+V L   +  L  +R F
Sbjct:   129 QMYR-TCL--AFSMVSVNAWFWSTIFHTRDTALTEKMDYFCASSVIL--HSIYLCCMRTF 183

Query:   128 SVRDEAARVMVAAPLIAFVTTHILYLNFYKLDHGLNMKVCLAMGVAQLLIWAIWAGVTR- 186
              ++  +      A L+     HI YL   + D+  NM    + G+  L+ W  W    R 
Sbjct:   184 GLQYPSIANAFGAFLVLLFACHISYLTLGRFDYSYNMAANTSFGIVNLMWWLAWCMWRRF 243

Query:   187 H-PSRWKLWLVVVG-EGLAMLLQIYDFPPYRGFVDAHALYHAANIPLTYLWWSFIRDDS 243
             H P  WK  LVVV  + LA LL++ DFPP    +DAHAL+H + IPL +L++SF+RDDS
Sbjct:   244 HQPYLWKCVLVVVLLQSLA-LLELLDFPPVMWILDAHALWHFSTIPLHFLFYSFLRDDS 301

GO:0006505 "GPI anchor metabolic process" evidence=ISS

GO:0016788 "hydrolase activity, acting on ester bonds" evidence=ISS

GO:0031227 "intrinsic to endoplasmic reticulum membrane" evidence=ISS

UNIPROTKB|Q0VFE3 pgap3 "Post-GPI attachment to proteins factor 3" [Xenopus (Silurana) tropicalis (taxid:8364)]

 Score = 361 (132.1 bits), Expect = 4.1e-33, P = 4.1e-33
 Identities = 88/239 (36%), Positives = 129/239 (53%)

Query:    10 KVGDKPVKYHGKWPFRRVYGIQVEPVAVALSALNLSIQFHGWMSFFILLYYKLPLRPDKK 69
             K G +  ++HGKWPF R    Q EP +   S LN      G  S  +LL Y+  + P   
Sbjct:    77 KEGHEVPQFHGKWPFSRFLFFQ-EPASALASFLN------GVASLLMLLRYRSSV-PSSC 128

Query:    70 TYYEYTGLWHIYGILAMNSWFWSAVFHSRDVELTEKLD--CSSAVALLGFNFILAILRAF 127
               Y  T L   + ++++N+WFWS +FH+RD  LTEK+D  C+S+V L   +  L  +R F
Sbjct:   129 QMYR-TCL--AFSMVSVNAWFWSTIFHTRDTALTEKMDYFCASSVIL--HSIYLCCMRTF 183

Query:   128 SVRDEAARVMVAAPLIAFVTTHILYLNFYKLDHGLNMKVCLAMGVAQLLIWAIWAGVTR- 186
              ++  +      A L+     H+ YL   + D+  NM      GV  L+ W  W    R 
Sbjct:   184 GLQYPSIANGFGAFLVLLFACHVSYLTLGRFDYSYNMAANTGFGVLNLMWWLAWCFRRRF 243

Query:   187 H-PSRWKLWLVVVG-EGLAMLLQIYDFPPYRGFVDAHALYHAANIPLTYLWWSFIRDDS 243
             H P  WK  LVV+  + LA LL++ DFPP    +DAHAL+H + +PL +L++SF++DDS
Sbjct:   244 HQPYLWKCVLVVISLQSLA-LLELLDFPPVMWILDAHALWHFSTVPLHFLFYSFLKDDS 301

GO:0006505 "GPI anchor metabolic process" evidence=ISS

GO:0016788 "hydrolase activity, acting on ester bonds" evidence=ISS

GO:0031227 "intrinsic to endoplasmic reticulum membrane" evidence=ISS

UNIPROTKB|H9L1M1 PERLD1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 350 (128.3 bits), Expect = 6.0e-32, P = 6.0e-32
 Identities = 88/228 (38%), Positives = 120/228 (52%)

Query:    21 KWPFRRVYGIQVEPVAVALSALNLSIQFHGWMSFFILLYYKLPLRPDKKTYYEYTGL-WH 79
             +WPF R   +Q EP +   S LN      G  SF +LL YK  + P    Y       W 
Sbjct:     2 QWPFSRFLFVQ-EPASAFASLLN------GLASFVMLLRYKAAVPPTSPMYPTCVAFAW- 53

Query:    80 IYGILAMNSWFWSAVFHSRDVELTEKLD--CSSAVALLGFNFILAILRAFSVRDEAARVM 137
                 +++N+WFWS VFH+RD  LTEKLD  C+SAV L   +  L  +R   +R  A   +
Sbjct:    54 ----VSVNAWFWSTVFHTRDTALTEKLDYFCASAVVL--HSVYLCWVRTMGLRRPALIGV 107

Query:   138 VAAPLIAFVTTHILYLNFYKLDHGLNMKVCLAMGVAQLLIWAIWA--GVTRHPSRWKLWL 195
               A L+ F+  HI YL   + D+G NM   +A+G   LL W  W      R P  WK  +
Sbjct:   108 FRAFLLLFLACHISYLTLVRFDYGYNMAANVAIGFFYLLWWLWWCLRNRPRLPHVWKCAV 167

Query:   196 VVVGEGLAMLLQIYDFPPYRGFVDAHALYHAANIPLTYLWWSFIRDDS 243
             VV+      LL++ DFPP    +DAHAL+H + +PL  L++SF+ DDS
Sbjct:   168 VVLLLQAGALLELLDFPPLFWVLDAHALWHISTVPLNILFYSFLVDDS 215

GO:0006505 "GPI anchor metabolic process" evidence=IEA

GO:0016788 "hydrolase activity, acting on ester bonds" evidence=IEA

GO:0031227 "intrinsic to endoplasmic reticulum membrane" evidence=IEA

MGI|MGI:2444461 Pgap3 "post-GPI attachment to proteins 3" [Mus musculus (taxid:10090)]

 Score = 347 (127.2 bits), Expect = 1.3e-31, P = 1.3e-31
 Identities = 85/237 (35%), Positives = 132/237 (55%)

Query:    12 GDKPVKYHGKWPFRRVYGIQVEPVAVALSALNLSIQFHGWMSFFILLYYKLPLRPDKKTY 71
             G +  ++HGKWPF R   IQ EP +   S LN      G  S  +L  Y+  + P     
Sbjct:    84 GHRVPQFHGKWPFSRFLFIQ-EPASAVASLLN------GLASLVMLCRYRASV-PASSPM 135

Query:    72 YEYTGLWHIYGILAMNSWFWSAVFHSRDVELTEKLD--CSSAVALLGFNFILAILRAFSV 129
             Y +T +   +  +++N+WFWS VFH+RD +LTEK+D  C+SAV L   +  L  +R   +
Sbjct:   136 Y-HTCM--AFAWVSLNAWFWSTVFHTRDTDLTEKMDYFCASAVIL--HSVYLCCVRTVGL 190

Query:   130 RDEAARVMVAAPLIAFVTTHILYLNFYKLDHGLNMKVCLAMGVAQLLIWAIWAGVTRH-- 187
             +  +      A L+  +T HI YL+    D+G NM   +A+G+  L  W +W    R   
Sbjct:   191 QHPSVASAFGALLLLLLTGHISYLSLVHFDYGYNMMANVAIGLVNLAWWLVWCLRNRQRL 250

Query:   188 P-SRWKLWLVVVGEGLAMLLQIYDFPPYRGFVDAHALYHAANIPLTYLWWSFIRDDS 243
             P +R  + +VV+ +GL+ LL++ DFPP    +DAHA++H + IP+  L++ F+ DDS
Sbjct:   251 PHTRRCMVVVVLLQGLS-LLELLDFPPLFWVLDAHAIWHISTIPVHTLFFRFLEDDS 306

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0006505 "GPI anchor metabolic process" evidence=ISO

GO:0006506 "GPI anchor biosynthetic process" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016788 "hydrolase activity, acting on ester bonds" evidence=ISO

GO:0031227 "intrinsic to endoplasmic reticulum membrane" evidence=ISO

UNIPROTKB|Q96FM1 PGAP3 "Post-GPI attachment to proteins factor 3" [Homo sapiens (taxid:9606)]

 Score = 336 (123.3 bits), Expect = 1.8e-30, P = 1.8e-30
 Identities = 82/238 (34%), Positives = 127/238 (53%)

Query:    12 GDKPVKYHGKWPFRRVYGIQVEPVAVALSALNLSIQFHGWMSFFILLYYKLPLRPDKKTY 71
             G K  ++HGKWPF R    Q EP +   S LN      G  S  +L  Y+  +      Y
Sbjct:    84 GHKVPQFHGKWPFSRFLFFQ-EPASAVASFLN------GLASLVMLCRYRTFVPASSPMY 136

Query:    72 YEYTGL-WHIYGILAMNSWFWSAVFHSRDVELTEKLD--CSSAVALLGFNFILAILRAFS 128
             +      W     +++N+WFWS VFH+RD +LTEK+D  C+S V L   +  L  +R   
Sbjct:   137 HTCVAFAW-----VSLNAWFWSTVFHTRDTDLTEKMDYFCASTVIL--HSIYLCCVRTVG 189

Query:   129 VRDEAARVMVAAPLIAFVTTHILYLNFYKLDHGLNMKVCLAMGVAQLLIWAIWA--GVTR 186
             ++  A      A L+  +T H+ YL+  + D+G N+   +A+G+  ++ W  W      R
Sbjct:   190 LQHPAVVSAFRALLLLMLTVHVSYLSLIRFDYGYNLVANVAIGLVNVVWWLAWCLWNQRR 249

Query:   187 HPSRWKLWLVVVG-EGLAMLLQIYDFPPYRGFVDAHALYHAANIPLTYLWWSFIRDDS 243
              P   K  +VV+  +GL+ LL++ DFPP    +DAHA++H + IP+  L++SF+ DDS
Sbjct:   250 LPHVRKCVVVVLLLQGLS-LLELLDFPPLFWVLDAHAIWHISTIPVHVLFFSFLEDDS 306

GO:0006506 "GPI anchor biosynthetic process" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0000139 "Golgi membrane" evidence=IEA

GO:0006505 "GPI anchor metabolic process" evidence=IMP

GO:0031227 "intrinsic to endoplasmic reticulum membrane" evidence=IDA

GO:0016788 "hydrolase activity, acting on ester bonds" evidence=IMP

UNIPROTKB|A7YWP2 PGAP3 "Post-GPI attachment to proteins factor 3" [Bos taurus (taxid:9913)]

 Score = 334 (122.6 bits), Expect = 3.0e-30, P = 3.0e-30
 Identities = 83/237 (35%), Positives = 129/237 (54%)

Query:    12 GDKPVKYHGKWPFRRVYGIQVEPVAVALSALNLSIQFHGWMSFFILLYYKLPLRPDKKTY 71
             G K  ++HGKWPF R    Q EP +   S LN      G  S  +L  Y+  + P     
Sbjct:    84 GQKVPQFHGKWPFSRFLCFQ-EPASAVASFLN------GLASLVMLCRYRTSV-PASSPM 135

Query:    72 YEYTGLWHIYGILAMNSWFWSAVFHSRDVELTEKLD--CSSAVALLGFNFILAILRAFSV 129
             Y  T +   +  +++N+WFWS VFH+RD +LTEK+D  C+S V L   +  L  +R   +
Sbjct:   136 YP-TCV--AFAWVSLNAWFWSTVFHTRDTDLTEKMDYFCASTVIL--HSIYLCCVRTVGL 190

Query:   130 RDEAARVMVAAPLIAFVTTHILYLNFYKLDHGLNMKVCLAMGV---AQLLIWAIWAGVTR 186
             +  A      A L+  +T H+ YL+    D+G NM   +A+G+   A  L W +W     
Sbjct:   191 QHPAMASAFRALLLLLLTAHVSYLSLIHFDYGYNMAANVAIGLLNAAWWLAWCLWNQRLP 250

Query:   187 HPSRWKLWLVVVGEGLAMLLQIYDFPPYRGFVDAHALYHAANIPLTYLWWSFIRDDS 243
             H  +  + +V++ +GL+ LL++ DFPP    +DAHA++H + IP+  L++SF+ DDS
Sbjct:   251 HVHKC-VAVVLLLQGLS-LLELLDFPPLFWVLDAHAIWHISTIPVHVLFFSFLEDDS 305

GO:0031227 "intrinsic to endoplasmic reticulum membrane" evidence=ISS

GO:0016788 "hydrolase activity, acting on ester bonds" evidence=ISS

GO:0006505 "GPI anchor metabolic process" evidence=ISS

GO:0000139 "Golgi membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0006506 "GPI anchor biosynthetic process" evidence=IEA

UNIPROTKB|F1RWL4 PGAP3 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 333 (122.3 bits), Expect = 3.8e-30, P = 3.8e-30
 Identities = 83/236 (35%), Positives = 122/236 (51%)

Query:    12 GDKPVKYHGKWPFRRVYGIQVEPVAVALSALNLSIQFHGWMSFFILLYYKLPLRPDKKTY 71
             G K  ++HGKWPF R    Q EP +   S LN      G  S  +L  Y+  + P     
Sbjct:    84 GHKVPQFHGKWPFSRFLCFQ-EPASAVASFLN------GLASLVMLCRYRASV-PASSPM 135

Query:    72 YEYTGLWHIYGILAMNSWFWSAVFHSRDVELTEKLD--CSSAVALLGFNFILAILRAFSV 129
             Y  T +   +  +++N+WFWS VFH+RD +LTEKLD  C+S V L   +  L  +R   +
Sbjct:   136 YP-TCV--AFAWVSLNAWFWSTVFHTRDTDLTEKLDYFCASTVIL--HSVYLCCVRTVGL 190

Query:   130 RDEAARVMVAAPLIAFVTTHILYLNFYKLDHGLNMKVCLAMGVAQLLIWAIWAGVTRH-- 187
             +  A      A L+  +T H+ YL+    D+G N+   +AMG+     W  W    R   
Sbjct:   191 QRPAVASAFRALLLLMLTAHVSYLSLVHFDYGYNLAANVAMGLVNAAWWLAWCLRNRRRL 250

Query:   188 PSRWKLWLVVVGEGLAMLLQIYDFPPYRGFVDAHALYHAANIPLTYLWWSFIRDDS 243
             P   K  +VV+      LL++ DFPP    +DAHA++H + IP+  L++SF+ DDS
Sbjct:   251 PHVRKCMVVVLLLQALSLLELLDFPPLFWVLDAHAIWHISTIPVHVLFFSFLEDDS 306

GO:0031227 "intrinsic to endoplasmic reticulum membrane" evidence=IEA

GO:0016788 "hydrolase activity, acting on ester bonds" evidence=IEA

GO:0006505 "GPI anchor metabolic process" evidence=IEA

POMBASE|SPAC823.07 SPAC823.07 "GPI-phospholipase A2 activity regulator (predicted)" [Schizosaccharomyces pombe (taxid:4896)]

 Score = 331 (121.6 bits), Expect = 6.2e-30, P = 6.2e-30
 Identities = 79/230 (34%), Positives = 121/230 (52%)

Query:    17 KYHGKWPFRRVYGIQVEPVAVALSALNLSIQFHGWMSFFILLYYKLPLRPDKKTYYEYTG 76
             +YHGKW F RV+GIQ E  +V  S LN  I ++G+       +      PD+        
Sbjct:    91 QYHGKWYFIRVFGIQ-ELFSVFFSMLNFMIHYNGY-------HIMRRCIPDEHPAKRLCL 142

Query:    77 LWHIYGILAMNSWFWSAVFHSRDVELTEKLDCSSAVALLGF-NFILAILRAFSVRDEAAR 135
              W I G   MN+W WS+VFH RD  +TEKLD  SA A + F ++   IL     +    +
Sbjct:   143 SWAIVG---MNAWVWSSVFHIRDTPITEKLDYFSAGAFVLFGSYCTLILMLRLDQLPGGK 199

Query:   136 VM---VAAPLIAFVTTHILYLNFYKLDHGLNMKVCLAMGVAQLLIWAIWAGVTRHPSR-W 191
             ++   +    IA    H+ YL+FY  D+G NMK  +A+G+ Q ++W  ++   R+    W
Sbjct:   200 LLCWIIGVIFIAAFIAHVSYLSFYSFDYGYNMKANVAVGLVQNILWYYYSWSNRNSGLYW 259

Query:   192 KLW--LVVVGEGLAMLLQIYDFPPYRGFVDAHALYHAANIPLTYLWWSFI 239
               W   +V    LA  L+++DF P    +DAHAL+H + +P+T+  + F+
Sbjct:   260 TRWPAYIVTSLMLATSLELFDFSPIANLIDAHALWHLSTVPITHYLYGFV 309

GO:0000329 "fungal-type vacuole membrane" evidence=ISO;IDA

GO:0003674 "molecular_function" evidence=ND

GO:0005789 "endoplasmic reticulum membrane" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0006506 "GPI anchor biosynthetic process" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0030026 "cellular manganese ion homeostasis" evidence=ISO

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: eugene3.00121171 hypothetical protein (348 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	255
pfam04080	264	pfam04080, Per1, Per1-like	1e-103
COG5237	319	COG5237, PER1, Predicted membrane protein [Functio	3e-35

>gnl|CDD|217878 pfam04080, Per1, Per1-like

 Score =  300 bits (770), Expect = e-103
 Identities = 112/249 (44%), Positives = 155/249 (62%), Gaps = 12/249 (4%)

Query: 1   MLAREGEREKVGDKPVKYHGKWPFRRVYGIQVEPVAVALSALNLSIQFHGWMSFFILLYY 60
                 EREK G+  V++HGKWPF+RV GIQ EP +V  S LNL + + G   F  L+ Y
Sbjct: 23  QQIITDEREKRGEPIVQFHGKWPFKRVLGIQ-EPFSVIFSLLNLLVHYKGLRRFRRLVPY 81

Query: 61  KLPLRPDKKTYYEYTGLWHIYGILAMNSWFWSAVFHSRDVELTEKLDCSSAVALLGFNFI 120
            LPLRP +K      G + IY I+ MN+W WSA+FH+RD  LTEKLD  SA A + +   
Sbjct: 82  NLPLRPTRK------GNYIIYAIVGMNAWIWSAIFHTRDFPLTEKLDYFSAGATVLYGLY 135

Query: 121 LAILRAFSV-RDEAARVMVAAPLIAFVTTHILYLNFYKLDHGLNMKVCLAMGVAQLLIWA 179
           LA++R F + R    R +  A  +A  TTH+LYL+FY  D+G NMK  + +G+ Q ++W 
Sbjct: 136 LAVVRTFRLDRRPLVRRLFTAVCLALYTTHVLYLSFYDWDYGYNMKANIVVGLLQNILWI 195

Query: 180 IWAGVTRHPSR--WKLW--LVVVGEGLAMLLQIYDFPPYRGFVDAHALYHAANIPLTYLW 235
           +W+ +        WKLW  L+V+   LAM L+++DFPP    +DAH+L+H A IP TYLW
Sbjct: 196 LWSFLRYRKYPKLWKLWPILLVIWLILAMSLELFDFPPIFWLIDAHSLWHLATIPPTYLW 255

Query: 236 WSFIRDDSE 244
           + F+ DD+E
Sbjct: 256 YDFLIDDAE 264

PER1 is required for GPI-phospholipase A2 activity and is involved in lipid remodelling of GPI-anchored proteins. Length = 264

>gnl|CDD|227562 COG5237, PER1, Predicted membrane protein [Function unknown]

 Score =  127 bits (321), Expect = 3e-35
 Identities = 73/238 (30%), Positives = 110/238 (46%), Gaps = 20/238 (8%)

Query: 14  KPVKYHGKWPFRRVYGIQVEPVAVALSALNLSIQFHGWMSFFILLYYKLPLRPDKKTYYE 73
           K  + HGKW F+RV G+Q E  +   S +N    + G   F  +L   L      + YY 
Sbjct: 83  KIYQRHGKWGFQRVLGMQ-EFFSALFSFMNFITHYIG---FHRMLRKILRETRLGRLYY- 137

Query: 74  YTGLWHIYGILAMNSWFWSAVFHSRDVELTEKLDCSSAVALLGFNFILAILRAFSV---- 129
                  +  + M +W  S+VFH RD  +TEKLD   A   + F F +A++R   +    
Sbjct: 138 -----LQWVYIGMLAWISSSVFHIRDNTITEKLDYFLAGLTVLFGFYMALVRMILIVSPP 192

Query: 130 RDEAARVMVAAPLIAFVTTHILYLNFYKLDHGLNMKVCLAMGVAQLLIWAIWAGVTRHP- 188
            ++A R  + A  IAF   HI  L+  + D+  NM    A+GV Q ++  + + +     
Sbjct: 193 IEKATRGPLQAIFIAFFAYHIHRLSNIEFDYVYNMISNCAIGVTQTILSHLVSFLNYRKL 252

Query: 189 ----SRWKLWLVVVGEGLAMLLQIYDFPPYRGFVDAHALYHAANIPLTYLWWSFIRDD 242
                R  L+ V     LA  L+++DFPPY   +DAHAL+H      T   + F   D
Sbjct: 253 GHTFKRIPLFFVFF-FFLAGSLELFDFPPYAYLIDAHALWHLITCISTPFLYLFWSGD 309

Length = 319

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	255
PF04080	267	Per1: Per1-like ; InterPro: IPR007217 A member of	100.0
KOG2970	319	consensus Predicted membrane protein [Function unk	100.0
COG5237	319	PER1 Predicted membrane protein [Function unknown]	100.0
PF03006	222	HlyIII: Haemolysin-III related; InterPro: IPR00425	97.6
PF05875	262	Ceramidase: Ceramidase; InterPro: IPR008901 This e	97.48
PF12036	186	DUF3522: Protein of unknown function (DUF3522); In	97.29
TIGR01065	204	hlyIII channel protein, hemolysin III family. This	96.23
PRK15087	219	hemolysin; Provisional	95.98
KOG0748	286	consensus Predicted membrane proteins, contain hem	86.35

>PF04080 Per1: Per1-like ; InterPro: IPR007217 A member of this family has been implemented in protein processing in the endoplasmic reticulum []

Probab=100.00  E-value=6.3e-97  Score=672.60  Aligned_cols=233  Identities=45%  Similarity=0.786  Sum_probs=212.5

Q ss_pred             CchhhHHHHHcCCCCccccccccceeeccccccHHHHHHHHhHHHHHHhhhHHHHHHHHhhCCCCCCCccchhhhhHHHH
Q 025307            1 MLAREGEREKVGDKPVKYHGKWPFRRVYGIQVEPVAVALSALNLSIQFHGWMSFFILLYYKLPLRPDKKTYYEYTGLWHI   80 (255)
Q Consensus         1 ~~~~~~~R~~~g~~i~QFhGKWPF~Rv~GiQ~Ep~SvlFSllNl~~h~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (255)
                      |...|++|+++|+|++||||||||+|++||| ||+||+||++|+++|+.|+++++    ++.+.+.+.++      .|++
T Consensus        23 m~~~t~~r~~~g~~i~QfhGKWPF~Rv~GiQ-Ep~Sv~FSllNl~~h~~~~~~~~----~~~~~~~p~~~------~~~~   91 (267)
T PF04080_consen   23 MWIITEERIKNGEPIVQFHGKWPFKRVLGIQ-EPASVLFSLLNLLAHYRGLRKFR----RQVPRNSPMYP------YYII   91 (267)
T ss_pred             cHHHHHHHHHcCCCcccccccccchhhhcCc-hHHHHHHHHHhHHHHHHHHHHHH----HhccCCCCCcC------eeeh
Confidence            6789999999999999999999999999999 99999999999999999998854    33443333332      2578


Q ss_pred             HHHHHHHHHHHHHhhhccCCCcchhhhHHhhHHHHHHHHHHHHHHhccCC-hhHHHHHHHHHHHHHHHHHhhhccccccc
Q 025307           81 YGILAMNSWFWSAVFHSRDVELTEKLDCSSAVALLGFNFILAILRAFSVR-DEAARVMVAAPLIAFVTTHILYLNFYKLD  159 (255)
Q Consensus        81 ~~~i~~~aW~~StvFH~RD~~~TE~lDYf~A~~~vl~~l~~~~~R~f~l~-~~~~r~~~~~~~~~~~~~Hv~yL~~~~fd  159 (255)
                      ++++|||||+||||||+||+++|||||||||+++|++|++++++|+++++ ++..+.+++++|+++|++||+||++.|||
T Consensus        92 ~~~v~~naW~wStvFH~RD~~~TE~lDYf~A~a~vl~~l~~~~~R~f~l~~~~~~~~~~~~~~~~~~~~Hv~yL~~~~fd  171 (267)
T PF04080_consen   92 YAIVSMNAWIWSTVFHTRDTPLTEKLDYFSAGATVLFGLYAAIVRIFRLYRRRRLRRIFTALCIAFYIAHVSYLSFVRFD  171 (267)
T ss_pred             HHHHHHHHHHHHHHHHHhcccHhhHhHHhhhHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHccccccc
Confidence            99999999999999999999999999999999999999999999999995 44567789999999999999999999999


Q ss_pred             ccchhhhHHHHHHHHHHHHHHHHhhhcCCcc---------chhH--HHHHHHHHHHHHHhhcCCCCcccchhhhhhhcCc
Q 025307          160 HGLNMKVCLAMGVAQLLIWAIWAGVTRHPSR---------WKLW--LVVVGEGLAMLLQIYDFPPYRGFVDAHALYHAAN  228 (255)
Q Consensus       160 Y~YNM~~nv~~G~~~~~lW~~~~~~~~~~~~---------~~~~--~~v~~~~~a~~LEl~DFpP~~~~iDAHaLWHl~T  228 (255)
                      |||||++||++|++|+++|+.||+.++++..         ++++  ++++++.+||+|||+||||+++++|||||||++|
T Consensus       172 Y~YNM~~nv~~G~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~~~lam~LEl~DFpP~~~~lDAHALWHl~T  251 (267)
T PF04080_consen  172 YGYNMKANVAVGLLQNILWLLWSFRNYRRYPSVKKSYSKRWKLWPILFVVLTILAMSLELFDFPPIFWLLDAHALWHLAT  251 (267)
T ss_pred             cHhHHHHHHHHHHHHHHHHHHHHHHhcccccccccchhHHHHHHHHHHHHHHHHHHHHHhhccCcccccchHHHHHHHHH
Confidence            9999999999999999999999998765433         6777  7788999999999999999999999999999999


Q ss_pred             chhHHHHHHHHHhhhh
Q 025307          229 IPLTYLWWSFIRDDSE  244 (255)
Q Consensus       229 ip~~~~wy~Fli~D~~  244 (255)
                      |||+++||+|+++|+|
T Consensus       252 ip~~~~wy~Fl~~D~~  267 (267)
T PF04080_consen  252 IPPTYLWYDFLIDDAE  267 (267)
T ss_pred             hhHHHHHHHHHHHhcC
Confidence            9999999999999986

>KOG2970 consensus Predicted membrane protein [Function unknown]

Probab=100.00  E-value=1.1e-92  Score=645.83  Aligned_cols=243  Identities=48%  Similarity=0.888  Sum_probs=227.2

Q ss_pred             CchhhHHHHHcCCCCccccccccceeeccccccHHHHHHHHhHHHHHHhhhHHHHHHHHhhCCCCCCCccchhhhhHHHH
Q 025307            1 MLAREGEREKVGDKPVKYHGKWPFRRVYGIQVEPVAVALSALNLSIQFHGWMSFFILLYYKLPLRPDKKTYYEYTGLWHI   80 (255)
Q Consensus         1 ~~~~~~~R~~~g~~i~QFhGKWPF~Rv~GiQ~Ep~SvlFSllNl~~h~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (255)
                      |.++|++|+++|+|++||||||||+||+||| |||||+||++|+++|++|+.+      +|.+.+++++.+|+  ++|++
T Consensus        73 m~~t~~~~~~~~~pi~qfhGKWpFlrvlGiQ-Ep~SviFS~lNl~~h~~g~~~------~r~~~~~~~~~r~~--~l~~I  143 (319)
T KOG2970|consen   73 MWTTESEFIKRGGPIPQFHGKWPFLRVLGIQ-EPFSVIFSFLNLITHYKGLVK------FRRPKKPNRPTRYE--RLWLI  143 (319)
T ss_pred             eeeehhhHHhcCCccccccCCcchhhhhhcc-chHHHHHHHHHHHHHHHHHhh------eecccCCCCcchhc--cchhh
Confidence            7889999999999999999999999999999 999999999999999999654      66777788888887  79999


Q ss_pred             HHHHHHHHHHHHHhhhccCCCcchhhhHHhhHHHHHHHHHHHHHHhccCChh-HHHHHHHHHHHHHHHHHhhhccccccc
Q 025307           81 YGILAMNSWFWSAVFHSRDVELTEKLDCSSAVALLGFNFILAILRAFSVRDE-AARVMVAAPLIAFVTTHILYLNFYKLD  159 (255)
Q Consensus        81 ~~~i~~~aW~~StvFH~RD~~~TE~lDYf~A~~~vl~~l~~~~~R~f~l~~~-~~r~~~~~~~~~~~~~Hv~yL~~~~fd  159 (255)
                      |+++|||||+||+|||+||+++|||||||+|+++|+||+|++++|.++++.. ..|.+++++++++|+.|+.||++++||
T Consensus       144 ~a~i~mnawiwSsvFH~rD~~lTEklDYf~A~~~vlf~ly~a~ir~~~i~~~~~~~~~ita~fla~ya~Hi~yls~~~fd  223 (319)
T KOG2970|consen  144 YAYIGMNAWIWSSVFHIRDVPLTEKLDYFSAYLTVLFGLYVALIRMLSIQSLPALRGMITAIFLAFYANHILYLSFYNFD  223 (319)
T ss_pred             HHHHHHHHHHHHHhhhhcCCchHhhhhHHHHHHHHHHHHHHHHHHHHHHhcchhhhHHHHHHHHHHHHHHHHHHhheecc
Confidence            9999999999999999999999999999999999999999999999999876 678899999999999999999999999


Q ss_pred             ccchhhhHHHHHHHHHHHHHHHHhh-hcCCccchhHHH--HHHHHHHHHHHhhcCCCCcccchhhhhhhcCcchhHHHHH
Q 025307          160 HGLNMKVCLAMGVAQLLIWAIWAGV-TRHPSRWKLWLV--VVGEGLAMLLQIYDFPPYRGFVDAHALYHAANIPLTYLWW  236 (255)
Q Consensus       160 Y~YNM~~nv~~G~~~~~lW~~~~~~-~~~~~~~~~~~~--v~~~~~a~~LEl~DFpP~~~~iDAHaLWHl~Tip~~~~wy  236 (255)
                      |||||++|+++|++|+++|..|++. +++|+.++++++  +.++.+||+||++||||+.|++|||||||++|||++++||
T Consensus       224 YgyNm~~~v~~g~iq~vlw~~~~~~~~~~~s~~~i~~~~i~~~~~LA~sLEi~DFpPy~~~iDAHALWHlaTIplt~~~~  303 (319)
T KOG2970|consen  224 YGYNMIVCVAIGVIQLVLWLVWSFKKRNLPSFWRIWPILIVIFFFLAMSLEIFDFPPYAWLIDAHALWHLATIPLTILWY  303 (319)
T ss_pred             cccceeeehhhHHHHHHHHHHHHHHhhcCcchhhhhHHHHHHHHHHHHHHHhhcCCchhhhcchHHHHHhhcCccHHHHH
Confidence            9999999999999999999999954 578999997754  4456999999999999999999999999999999999999


Q ss_pred             HHHHhhhhHHHHhhhc
Q 025307          237 SFIRDDSEFRTTALLK  252 (255)
Q Consensus       237 ~Fli~D~~~~~~~~~~  252 (255)
                      +|+.+|+++.+++.+|
T Consensus       304 ~Fv~~d~~~~t~~~l~  319 (319)
T KOG2970|consen  304 DFVSDDYDFATGVRLK  319 (319)
T ss_pred             HHhhchhhhhcceecC
Confidence            9999999999986654

>COG5237 PER1 Predicted membrane protein [Function unknown]

Probab=100.00  E-value=1e-74  Score=518.64  Aligned_cols=233  Identities=30%  Similarity=0.398  Sum_probs=204.2

Q ss_pred             hHHHHHcCCCCccccccccceeeccccccHHHHHHHHhHHHHHHhhhHHHHHHHHhhCCC-CCCCccchhhhhHHHHHHH
Q 025307            5 EGEREKVGDKPVKYHGKWPFRRVYGIQVEPVAVALSALNLSIQFHGWMSFFILLYYKLPL-RPDKKTYYEYTGLWHIYGI   83 (255)
Q Consensus         5 ~~~R~~~g~~i~QFhGKWPF~Rv~GiQ~Ep~SvlFSllNl~~h~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~   83 (255)
                      |+-|.++++|+.||||||||.||+||| |++|++||++|+++||.|+.++.    ++.+. .+.++.++.      .+++
T Consensus        74 ~~~~~~~n~~~~q~hGkW~F~rVlG~q-EfFS~~FS~~Nfi~hy~gfh~m~----r~i~~e~~~~R~~~l------~wv~  142 (319)
T COG5237          74 LKFTNSGNIKIYQRHGKWGFQRVLGMQ-EFFSALFSFMNFITHYIGFHRML----RKILRETRLGRLYYL------QWVY  142 (319)
T ss_pred             HHHhccCCchhhhhcCccceeeehhHH-HHHHHHHHHHHHHHHHHHHHHHH----HHhcccccccceEEe------eHHH
Confidence            566788899999999999999999999 99999999999999999998742    34433 333444443      4579


Q ss_pred             HHHHHHHHHHhhhccCCCcchhhhHHhhHHHHHHHHHHHHHHhccCCh----hHHHHHHHHHHHHHHHHHhhhccccccc
Q 025307           84 LAMNSWFWSAVFHSRDVELTEKLDCSSAVALLGFNFILAILRAFSVRD----EAARVMVAAPLIAFVTTHILYLNFYKLD  159 (255)
Q Consensus        84 i~~~aW~~StvFH~RD~~~TE~lDYf~A~~~vl~~l~~~~~R~f~l~~----~~~r~~~~~~~~~~~~~Hv~yL~~~~fd  159 (255)
                      +||+||+||+|||+||+++|||+|||+|+++|++|+|++.+|..++..    +..|...+++++++|+.||.||++++||
T Consensus       143 igmlAwi~SsvFHird~~iTeklDYF~AgltVLfGfy~~lvrm~~~~~~p~~K~~~~~~~aifia~fa~Hi~rls~i~fd  222 (319)
T COG5237         143 IGMLAWISSSVFHIRDNTITEKLDYFLAGLTVLFGFYMALVRMILIVSPPIEKATRGPLQAIFIAFFAYHIHRLSNIEFD  222 (319)
T ss_pred             HHHHHHHHHhheeeeccchhhhHHHHHhhHHHHHHHHHHHHHHHHhhcCchHHHHHhHHHHHHHHHHHHHHHHHhhccce
Confidence            999999999999999999999999999999999999999999988654    3456677899999999999999999999


Q ss_pred             ccchhhhHHHHHHHHHHHHHHHHhhhcCC--ccchhH--HHHHHHHHHHHHHhhcCCCCcccchhhhhhhcCcchhHHHH
Q 025307          160 HGLNMKVCLAMGVAQLLIWAIWAGVTRHP--SRWKLW--LVVVGEGLAMLLQIYDFPPYRGFVDAHALYHAANIPLTYLW  235 (255)
Q Consensus       160 Y~YNM~~nv~~G~~~~~lW~~~~~~~~~~--~~~~~~--~~v~~~~~a~~LEl~DFpP~~~~iDAHaLWHl~Tip~~~~w  235 (255)
                      |+|||++|+++|+.|+++|...+..+++.  ..+|-+  .+|..+.+|+||||+||||+-++||||||||++|+|++.+.
T Consensus       223 Y~YNm~~n~aigv~q~iL~~~~s~~ny~~~g~~~kr~p~~~v~~~~lA~slElfDf~pya~lIDaHAlWHL~t~~~t~~l  302 (319)
T COG5237         223 YVYNMISNCAIGVTQTILSHLVSFLNYRKLGHTFKRIPLFFVFFFFLAGSLELFDFPPYAYLIDAHALWHLITCISTPFL  302 (319)
T ss_pred             eeehhhhcchHHHHHHHHHHHHHHhhhHhhhhhhhhhhHHHHHHHHHhhhhhhhccCcHHHHhhHHHHhHhhhccchHHH
Confidence            99999999999999999999999887654  223433  45677889999999999999999999999999999999999


Q ss_pred             HHHHHhhhhHHHH
Q 025307          236 WSFIRDDSEFRTT  248 (255)
Q Consensus       236 y~Fli~D~~~~~~  248 (255)
                      |+|...|+.|.-+
T Consensus       303 y~F~~~d~~y~~n  315 (319)
T COG5237         303 YLFWSGDVYYHGN  315 (319)
T ss_pred             HHhhhcceeeecc
Confidence            9999999988765

>PF03006 HlyIII: Haemolysin-III related; InterPro: IPR004254 Members of this family are integral membrane proteins

Probab=97.60  E-value=0.0024  Score=55.29  Aligned_cols=154  Identities=18%  Similarity=0.195  Sum_probs=76.6

Q ss_pred             HHHHHHHHHHHHHHHHhhhc-------cCCCcchhhhHHhhHHHHHHHHHHHHHHhccCChhHHHHHHHHH-HHHHHHHH
Q 025307           78 WHIYGILAMNSWFWSAVFHS-------RDVELTEKLDCSSAVALLGFNFILAILRAFSVRDEAARVMVAAP-LIAFVTTH  149 (255)
Q Consensus        78 ~~~~~~i~~~aW~~StvFH~-------RD~~~TE~lDYf~A~~~vl~~l~~~~~R~f~l~~~~~r~~~~~~-~~~~~~~H  149 (255)
                      ..+|....+...+.||++|+       +.-..-.|+||.+-...+..+..-...-.+.-+........... ++++....
T Consensus        44 ~~~~~~~~~~~~~~St~yH~f~~~s~~~~~~~~~~lD~~gI~l~i~gs~~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  123 (222)
T PF03006_consen   44 FLIYLLSAILCFLCSTLYHLFSCHSEGKVYHIFLRLDYAGIFLLIAGSYTPFIYYGFYCHPWLGWFYLAFIWILALIGIV  123 (222)
T ss_pred             HHHHHHHHHHHHHhHHHhhCCCcCCcHHHHHHHHhcchhhhhHhHhhhhhhHHHhhccccchHHHHHHHHHHHHHHHhHH
Confidence            35677777778999999999       34566779999997666665544333333311222222111111 11111111


Q ss_pred             hhhccccccc----ccchhhhHHHHHHHHHHHHHHHHhhh---cCCc-cchhHHHHHHHHHHHHHHhhcCCCCc--ccc-
Q 025307          150 ILYLNFYKLD----HGLNMKVCLAMGVAQLLIWAIWAGVT---RHPS-RWKLWLVVVGEGLAMLLQIYDFPPYR--GFV-  218 (255)
Q Consensus       150 v~yL~~~~fd----Y~YNM~~nv~~G~~~~~lW~~~~~~~---~~~~-~~~~~~~v~~~~~a~~LEl~DFpP~~--~~i-  218 (255)
                       ..+ ...++    ..--+.+-++.|....+...-.....   ..|. ......-.++-.+|+.+-..++|.-+  +-+ 
T Consensus       124 -~~~-~~~~~~~~~~~~r~~~~~~~g~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~G~~fy~~~~PEr~~pg~fD  201 (222)
T PF03006_consen  124 -LSL-FPCFSSPRFRWLRTIFFLLLGWSGIIPIFHRIFFLGGWGSPDPLWLLILGGVLYLLGAVFYATRIPERWFPGKFD  201 (222)
T ss_pred             -hhc-chhhcCCccceeeehHhHHHHHHHHhhhHHHHHHhccccchHHHHHHHHHHHHHHHhHHHhhhccccccCCCCcC
Confidence             111 11211    22223334445544443333211111   1111 11112233455678889999977622  234 


Q ss_pred             ---hhhhhhhcCcchhHH
Q 025307          219 ---DAHALYHAANIPLTY  233 (255)
Q Consensus       219 ---DAHaLWHl~Tip~~~  233 (255)
                         -+|.+||+..+--+.
T Consensus       202 ~~g~sHqi~Hi~v~~~~~  219 (222)
T PF03006_consen  202 IWGHSHQIWHIFVVLAAL  219 (222)
T ss_pred             CCCccHHHHHHHHHHHHH
Confidence               499999998765444

This family includes proteins that are hemolysin-III homologs.; GO: 0016021 integral to membrane

>PF05875 Ceramidase: Ceramidase; InterPro: IPR008901 This entry consists of several ceramidases

Probab=97.48  E-value=0.011  Score=53.54  Aligned_cols=184  Identities=15%  Similarity=0.077  Sum_probs=94.4

Q ss_pred             cHHHHHHHHhHHHHHHhhhHHHHHHHHhhCCCCCCCccchhhhhHHHHHHHHHHHHHHHHHhhhccCCCcchhhhHHhhH
Q 025307           33 EPVAVALSALNLSIQFHGWMSFFILLYYKLPLRPDKKTYYEYTGLWHIYGILAMNSWFWSAVFHSRDVELTEKLDCSSAV  112 (255)
Q Consensus        33 Ep~SvlFSllNl~~h~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~aW~~StvFH~RD~~~TE~lDYf~A~  112 (255)
                      ||.=++-++.=+++-..|+.+.     ++  .+.+. ...      ..+..+..++ +-|+.||+-=...|+-+|=..-.
T Consensus        26 Ef~NtlSNl~fi~~al~gl~~~-----~~--~~~~~-~~~------l~~~~l~~VG-iGS~~FHaTl~~~~ql~DelPMl   90 (262)
T PF05875_consen   26 EFWNTLSNLAFIVAALYGLYLA-----RR--RGLER-RFA------LLYLGLALVG-IGSFLFHATLSYWTQLLDELPML   90 (262)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHH-----hh--ccccc-hhH------HHHHHHHHHH-HhHHHHHhChhhhHHHhhhhhHH
Confidence            9998877777667666665542     11  11111 111      2233344444 89999999888999999976654


Q ss_pred             HHHHHHHHHHHHHhccCChhHHHHHHHHHH----HHHHHHHhhhcccccccccchhhhHHHHHHHHHHHHHHHHh--hh-
Q 025307          113 ALLGFNFILAILRAFSVRDEAARVMVAAPL----IAFVTTHILYLNFYKLDHGLNMKVCLAMGVAQLLIWAIWAG--VT-  185 (255)
Q Consensus       113 ~~vl~~l~~~~~R~f~l~~~~~r~~~~~~~----~~~~~~Hv~yL~~~~fdY~YNM~~nv~~G~~~~~lW~~~~~--~~-  185 (255)
                      -..+..++....+..  .++..|...+..+    ++..+.|...=   +.  ..|   ++.+|.....+.+.-..  .. 
T Consensus        91 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~L~~~~~~~t~~~~~~~---~p--~~~---~~~f~~~~~~~~~~~~~~~~~~  160 (262)
T PF05875_consen   91 WATLLFLYIVLTRRY--SSPRYRLALPLLLFIYAVVVTVLYFVLD---NP--VFH---QIAFASLVLLVILRSIYLIRRR  160 (262)
T ss_pred             HHHHHHHHHHhcccc--cCchhhHHHHHHHHHHHHHHHHHHhhhc---cc--hhh---hhhHHHHHHHHHHHHHHHHHHh
Confidence            333333333333322  1111122222221    22223333311   11  111   23344443333332111  11 


Q ss_pred             -----cCCccchhH-HHHHHHHHHHHHHhhcC--------------CCCcccchhhhhhhcCcchhHHHHHHHHHh
Q 025307          186 -----RHPSRWKLW-LVVVGEGLAMLLQIYDF--------------PPYRGFVDAHALYHAANIPLTYLWWSFIRD  241 (255)
Q Consensus       186 -----~~~~~~~~~-~~v~~~~~a~~LEl~DF--------------pP~~~~iDAHaLWHl~Tip~~~~wy~Fli~  241 (255)
                           +++...++. .-++...+|..+-..|-              .|+..++--|++||+.|---+++...+.+-
T Consensus       161 ~~~~~~~~~~~~l~~~~~~~f~~a~~~W~iD~~~C~~~~~~~~~~g~p~~~~le~H~~WHilt~ig~Y~~~~~~~~  236 (262)
T PF05875_consen  161 VRDACRRRRARRLLLFGLALFLVAFFFWNIDRIFCSSLRAIRFPYGLPLGFLLELHAWWHILTGIGAYLLIVFVAY  236 (262)
T ss_pred             cCchhhchHHHHHHHHHHHHHHHHHHHHHhHHHHHccccccccccCCcchhHHhHHHHHHHHHHHHHHHHHHHHHH
Confidence                 112222332 33445567788888776              355566789999999998888877776544

Ceramidases are enzymes involved in regulating cellular levels of ceramides, sphingoid bases, and their phosphates.; GO: 0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides, 0006672 ceramide metabolic process, 0016021 integral to membrane

>PF12036 DUF3522: Protein of unknown function (DUF3522); InterPro: IPR021910 This family of proteins is functionally uncharacterised

Probab=97.29  E-value=0.0052  Score=53.73  Aligned_cols=92  Identities=14%  Similarity=0.151  Sum_probs=49.5

Q ss_pred             HHHHHHHHHHHHhhhccC-CC----cc----hhhhHHhhHHHHHHHHHHHHHHhccCChhHHH--HHHHHHHHHHHHHHh
Q 025307           82 GILAMNSWFWSAVFHSRD-VE----LT----EKLDCSSAVALLGFNFILAILRAFSVRDEAAR--VMVAAPLIAFVTTHI  150 (255)
Q Consensus        82 ~~i~~~aW~~StvFH~RD-~~----~T----E~lDYf~A~~~vl~~l~~~~~R~f~l~~~~~r--~~~~~~~~~~~~~Hv  150 (255)
                      +.++..+=++|+.+|+.| .+    ++    ++|||......++. .....+..-++++...+  ..+++.++++..   
T Consensus        34 a~v~~~tm~~S~~YHacd~~~~~~~lc~~~~~~L~~~~~~~s~~~-~~vtl~~~a~~~~~~~~~l~~~~~~~~ai~~---  109 (186)
T PF12036_consen   34 AFVYTFTMFFSTFYHACDSGPGEIFLCIMDWHRLQNIDFIGSFLS-IWVTLCAMARLDEPLKSVLHYFGALVIAIFQ---  109 (186)
T ss_pred             HHHHHHHHHHHHhcccccCCCCceEEeechHHHHHHHHHHHHHHH-HHHHHHHhccCCHHHHHHHHHHHHHHHHHHH---
Confidence            788889999999999999 55    44    47888776543332 22223333333332222  233333333332   


Q ss_pred             hhcccccccccchhhhHHHHHHHH-HHHHHHH
Q 025307          151 LYLNFYKLDHGLNMKVCLAMGVAQ-LLIWAIW  181 (255)
Q Consensus       151 ~yL~~~~fdY~YNM~~nv~~G~~~-~~lW~~~  181 (255)
                       .  ..+||+. |+..-+++|++- .+-|+..
T Consensus       110 -~--~~~~~~~-~~~~Pi~~~~~i~~~~w~~r  137 (186)
T PF12036_consen  110 -Q--KDRWSLW-NTIGPILIGLLILLVSWLYR  137 (186)
T ss_pred             -h--hCcccch-hhHHHHHHHHHHHHHHHhee
Confidence             2  2478855 455555555533 3344433

This protein is found in eukaryotes. Proteins in this family are typically between 220 to 787 amino acids in length.

>TIGR01065 hlyIII channel protein, hemolysin III family

Probab=96.23  E-value=0.3  Score=42.91  Aligned_cols=151  Identities=16%  Similarity=0.146  Sum_probs=73.5

Q ss_pred             HHHHHHHHHHHHHHHHHhhhccCC-----CcchhhhHHhhHHHHHHHHHHHHHHhccCChhHHHHHHHHHHHHHH--HHH
Q 025307           77 LWHIYGILAMNSWFWSAVFHSRDV-----ELTEKLDCSSAVALLGFNFILAILRAFSVRDEAARVMVAAPLIAFV--TTH  149 (255)
Q Consensus        77 ~~~~~~~i~~~aW~~StvFH~RD~-----~~TE~lDYf~A~~~vl~~l~~~~~R~f~l~~~~~r~~~~~~~~~~~--~~H  149 (255)
                      ...+|..-.+..-..||+||+-+.     ..-+|+||.+-..+|.-+..-...-.+.  .+....+..+...+..  +.+
T Consensus        38 ~~~vy~~~~~~~~~~St~yH~~~~s~~~~~~~~rlD~~gI~~lIaGsytP~~~~~~~--~~~~~~~~~~iw~la~~gi~~  115 (204)
T TIGR01065        38 GFSIYGISLILLFLVSTLYHSIPKGSKAKNWLRKIDHSMIYVLIAGTYTPFLLLALP--GPLGWTVLWIIWGLAIGGIIY  115 (204)
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCcCchhHHHHHHHccHHHHHHHHHHhhHHHHHHHcC--CcHHHHHHHHHHHHHHHHHHH
Confidence            345778888888999999998873     1556889998776666554443333332  2222222221111111  111


Q ss_pred             hhhcccccccccchhhhHHHHHHHHHHHHHHHHhhhcCCccchhHHHH---HHHHHHHHHHhhcCCCCcccchhhhhhhc
Q 025307          150 ILYLNFYKLDHGLNMKVCLAMGVAQLLIWAIWAGVTRHPSRWKLWLVV---VGEGLAMLLQIYDFPPYRGFVDAHALYHA  226 (255)
Q Consensus       150 v~yL~~~~fdY~YNM~~nv~~G~~~~~lW~~~~~~~~~~~~~~~~~~v---~~~~~a~~LEl~DFpP~~~~iDAHaLWHl  226 (255)
                      - .+...+++. .-...=++.|....+..--  ....-+.. -+..++   +.-+.++.+=..|+|--+   |-|.+||+
T Consensus       116 ~-~~~~~~~r~-~r~~~y~~~G~~~v~~~~~--~~~~~~~~-~~~~l~~gg~~Y~~G~~fY~~~~p~~~---~~H~iwH~  187 (204)
T TIGR01065       116 K-LFFHKRPRW-LSLFLYLIMGWLVVLVIKP--LYHNLPGA-GFSLLAAGGLLYTVGAIFYALKWPIPF---TYHAIWHL  187 (204)
T ss_pred             H-HHccCCCch-hHHHHHHHHHHHHHHHHHH--HHHhCCHH-HHHHHHHHhHHHHcchHheeecCCCCC---CcChHHHH
Confidence            1 121223331 2233333444333222110  11111211 111111   223456666667877433   22999999


Q ss_pred             CcchhHHHHHH
Q 025307          227 ANIPLTYLWWS  237 (255)
Q Consensus       227 ~Tip~~~~wy~  237 (255)
                      ..+--+...|-
T Consensus       188 fV~~g~~~h~~  198 (204)
T TIGR01065       188 FVLGASACHFV  198 (204)
T ss_pred             HHHHHHHHHHH
Confidence            88766665553

This family includes proteins from pathogenic and non-pathogenic bacteria, Homo sapiens and Drosophila. In Bacillus cereus, a pathogen, it has been show to function as a channel-forming cytolysin. The human protein is expressed preferentially in mature macrophages, consistent with a role cytolytic role.

>PRK15087 hemolysin; Provisional

Probab=95.98  E-value=0.39  Score=42.90  Aligned_cols=151  Identities=17%  Similarity=0.193  Sum_probs=73.3

Q ss_pred             HHHHHHHHHHHHHHHHhhhccCCC----cchhhhHHhhHHHHHHHHHHHHHHhccCChhHHHHHHHHHHHHHHHHHhhhc
Q 025307           78 WHIYGILAMNSWFWSAVFHSRDVE----LTEKLDCSSAVALLGFNFILAILRAFSVRDEAARVMVAAPLIAFVTTHILYL  153 (255)
Q Consensus        78 ~~~~~~i~~~aW~~StvFH~RD~~----~TE~lDYf~A~~~vl~~l~~~~~R~f~l~~~~~r~~~~~~~~~~~~~Hv~yL  153 (255)
                      ..+|+.-.+..-..||+||+=..+    +=+|+||.+-..+|.-+..-...-.+  +.+..+.+..+.-....+.=+..+
T Consensus        54 ~~vy~~s~~~l~~~StlYH~~~~~~~~~~~~rlDh~~I~llIaGsytP~~~~~~--~~~~~~~l~~~iW~~a~~Gi~~~~  131 (219)
T PRK15087         54 YSLYGGSMILLFLASTLYHAIPHQRAKRWLKKFDHCAIYLLIAGTYTPFLLVGL--DSPLARGLMIVIWSLALLGILFKL  131 (219)
T ss_pred             HHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHccHHHHHHHHHHhhHHHHHHHc--cCHHHHHHHHHHHHHHHHHHHHHH
Confidence            356888888889999999986522    33469999866655544332222222  222222222211111111111122


Q ss_pred             -ccccccccchhhhHHHHHHHHHHHHHHHHhhhcCCccchhHHH--HHHHHHHHHHHhhcCCCCcccchhhhhhhcCcch
Q 025307          154 -NFYKLDHGLNMKVCLAMGVAQLLIWAIWAGVTRHPSRWKLWLV--VVGEGLAMLLQIYDFPPYRGFVDAHALYHAANIP  230 (255)
Q Consensus       154 -~~~~fdY~YNM~~nv~~G~~~~~lW~~~~~~~~~~~~~~~~~~--v~~~~~a~~LEl~DFpP~~~~iDAHaLWHl~Tip  230 (255)
                       ...+|+ ...+..=++.|.+-.+.-  ..+....|..--.+++  -+.-+.++.+=..|-+|+     +|++||+..+.
T Consensus       132 ~~~~~~r-~l~~~~Yl~mGw~~v~~~--~~l~~~~~~~~l~~l~~GG~~Y~~G~~fY~~~~~p~-----~H~IwH~fVl~  203 (219)
T PRK15087        132 AFAHRFK-VLSLVTYLAMGWLSLIVI--YQLAIKLAIGGVTLLAVGGVVYSLGVIFYVCKRIPY-----NHAIWHGFVLG  203 (219)
T ss_pred             HhcCCCc-hHHHHHHHHHHHHHHHHH--HHHHHhCCHHHHHHHHHHhHHHHhhHHHHccCCCCC-----chhHHHHHHHH
Confidence             123444 234444445554433321  1111122211111111  112245566666676665     89999998877


Q ss_pred             hHHHHHHH
Q 025307          231 LTYLWWSF  238 (255)
Q Consensus       231 ~~~~wy~F  238 (255)
                      -+...|--
T Consensus       204 ga~~H~~a  211 (219)
T PRK15087        204 GSVCHFLA  211 (219)
T ss_pred             HHHHHHHH
Confidence            66666543

>KOG0748 consensus Predicted membrane proteins, contain hemolysin III domain [General function prediction only; Signal transduction mechanisms]

Probab=86.35  E-value=29  Score=32.48  Aligned_cols=154  Identities=18%  Similarity=0.177  Sum_probs=83.1

Q ss_pred             HHhhhccCCC------cchhhhHHhhHHHHHHHHHHHHHHhccCChhHHHHHH-HHHH-HHHHHHHhhhcccccc--ccc
Q 025307           92 SAVFHSRDVE------LTEKLDCSSAVALLGFNFILAILRAFSVRDEAARVMV-AAPL-IAFVTTHILYLNFYKL--DHG  161 (255)
Q Consensus        92 StvFH~RD~~------~TE~lDYf~A~~~vl~~l~~~~~R~f~l~~~~~r~~~-~~~~-~~~~~~Hv~yL~~~~f--dY~  161 (255)
                      |+++|+=-.-      .=-||||.+-.+.+.-+......-.|.-.... |.+. ...+ +.+.+.=+. + ..++  .+-
T Consensus        98 S~~~H~~~~~s~~~~~~~~~lDY~GIs~li~gS~~~~~yy~f~c~~~~-~~iy~~~~~~lgi~~~~~~-l-~~~~~~~~~  174 (286)
T KOG0748|consen   98 SSLYHLFSCHSEKVSRFFLKLDYAGISLLIIGSFLPIIYYAFYCHPFF-RLIYLPIILVLGLLAIFVS-L-SDKFRTPKR  174 (286)
T ss_pred             HHHHHHHhcccHHHHHHHHHccHHhhHHHHHHHHHHHHHHhcccchHH-HHHHHHHHHHHHHHHheee-c-hhhhCCccc
Confidence            9999985444      22368999977776666655444444322222 2121 1111 111111111 1 1122  113


Q ss_pred             chhhhHHHHHHHHHHH-HHHHHhhhc--C-Cc-cch---hHHHHHHHHHHHHHHhhcCCCCc--ccch----hhhhhhcC
Q 025307          162 LNMKVCLAMGVAQLLI-WAIWAGVTR--H-PS-RWK---LWLVVVGEGLAMLLQIYDFPPYR--GFVD----AHALYHAA  227 (255)
Q Consensus       162 YNM~~nv~~G~~~~~l-W~~~~~~~~--~-~~-~~~---~~~~v~~~~~a~~LEl~DFpP~~--~~iD----AHaLWHl~  227 (255)
                      -+-|++++++....-+ =+.+.....  + +. ...   ...-.++..+|..+=....|--+  +.+|    +|-+||..
T Consensus       175 r~~R~~~f~~~~~~~i~P~~h~~~~~g~~~~~~~~~~~~~~~~~~~yi~ga~fY~~riPER~~PGkfD~~G~SHQifHv~  254 (286)
T KOG0748|consen  175 RPLRAGVFLLLGLSGILPLLHRLILFGGRGPEVVIALGYVILMAVLYLLGALFYATRIPERWFPGKFDIWGHSHQIFHVL  254 (286)
T ss_pred             hhhHHHHHHHHHHhhccHhhhheeeecCCccceehhhhHHHHHHHHHHHHHHHhhcCCCcccCCCccceeCChhHHHHHH
Confidence            4677777766642211 111111111  1 11 111   11223455677778778887633  3555    49999999


Q ss_pred             cchhHHHHHHHHHhhhhHHHH
Q 025307          228 NIPLTYLWWSFIRDDSEFRTT  248 (255)
Q Consensus       228 Tip~~~~wy~Fli~D~~~~~~  248 (255)
                      .+--++.+++=...|.+.+.+
T Consensus       255 vv~~a~~~~~a~~~~~~~~~~  275 (286)
T KOG0748|consen  255 VVLAALFHLEAVLLDYEWRHS  275 (286)
T ss_pred             HHHHHHHHHHHHHHHHHHHHh
Confidence            999999999999999998876

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	255
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-09

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 57.2 bits (137), Expect = 1e-09
 Identities = 31/181 (17%), Positives = 55/181 (30%), Gaps = 52/181 (28%)

Query: 113 ALLGFNFIL------AILRAFSV--------RDEAARVMVAAPLIAFVTTHILYLNFYK- 157
            LL    +L          AF++        R +     V   L A  TTHI   +    
Sbjct: 246 CLL----VLLNVQNAKAWNAFNLSCKILLTTRFKQ----VTDFLSAATTTHISLDHHSMT 297

Query: 158 LDHG---------LNMKV-CL---AMGVAQLLIWAIWAGVTRHPSRWKLWLVVVGEGLAM 204
           L            L+ +   L    +      +  I   +    + W  W  V  + L  
Sbjct: 298 LTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTT 357

Query: 205 LLQ--IYDFPPYRGFVDAHALYHA-------ANIP---LTYLWWSFIRDDSEFRTTALLK 252
           +++  +    P     +   ++         A+IP   L+ +W+  I+ D       L K
Sbjct: 358 IIESSLNVLEPA----EYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHK 413

Query: 253 K 253
            
Sbjct: 414 Y 414

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00