Citrus Sinensis ID: 025375

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250---
Protein Sequence
MSFKSTGGEFASRNLIPRKWALFLCACSFCAGMSFTNRMWMMPESKGVARISKTEEIENPELKAVKHESNNNTEKLAMVEQAIQSQDKRLDGLKTKITAVRAERDSVSLSHPVKGTSNISGSMLKRKYFMVIGINTAFSSRKRRDSVRATWMPQGEKRKMLEEAKGIIIRFVIGHSATSGGILDKAIDAEEKMHGDFLRLEHIEGYLELSAKTKTYFATAVSMWDAEFYIKVDDDVHVNLGKETFYLVLHCIL
Secondary Structure (PSIPRED)
cccccccccccccccccHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccHHHcccccccccHHHHHHHHHHHHHHcccccccccHHHHHHcccccccccccccccccccccccccEEEEEEEEcccccHHHHHHHHHHccccccccHHHHccccEEEEEEEEcccccccHHHHHHHHHHHHcccEEEEccccccccHHHHHHHHHHHHHHHcccEEEEEcccccEEcHHHHHHHHHHcccc
Secondary Structure Prediction (SSPRO)
cccccccccccccccccHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccEEcccccHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccEEEEEEEEEcccccHHHHHHHHHHcccccHHHHHHHccccEEEEEEEEcccccccHHHHHHHHHHHHcccEEEEccHHHHHHHHHHHHHHHHHHHHHccccEEEEEcccEEEcHHHHHHHHHHHccc
Coil and Loop (DISEMBL)
msfkstggefasrnlipRKWALFLCACsfcagmsftnrmwmmpeskgvariskteeienpelkavkhesnnnTEKLAMVEQAIQSQDKRLDGLKTKITAVraerdsvslshpvkgtsnisgsmlKRKYFMVIGINTafssrkrrdsvratwmpqgekRKMLEEAKGIIIRFVIghsatsggildKAIDAEEKMHGDFLRLEHIEGYLELSAKTKTYFATAVSMWdaefyikvdddvhvnlgkETFYLVLHCIL
Flexible Loop (DISEMBL)
msfkstggefasrnlipRKWALFLCACSFCAGMSFTNRMWMMPESKGVARISKTEeienpelkavkhesnnnTEKLAMVEQAIQSQDKRLDGLKTKITavraerdsvslshpvkgtsnisgsmlkrKYFMVIGINtafssrkrrdsvratwmpqgekrkMLEEAKGIIIRFvighsatsGGILDKAIDAEEKMHGDFLRLEHIEGYLELSAKTKTYFATAVSMWDAEFYIKVDDDVHVNLGKETFYLVLHCIL
Low Complexity Region (SEG)
MSFKSTGGEFASRNLIPRKWALFLCACSFCAGMSFTNRMWMMPESKGVARISKTEEIENPELKAVKHESNNNTEKLAMVEQAIQSQDKRLDGLKTKITAVRAERDSVSLSHPVKGTSNISGSMLKRKYFMVIGINTAFSSRKRRDSVRATWMPQGEKRKMLEEAKGIIIRFVIGHSATSGGILDKAIDAEEKMHGDFLRLEHIEGYLELSAKTKTYFATAVSMWDAEFYIKVDDDVHVNLGKETFYLVLHCIL
Disordered region (IsUnstruct)
************RNLIPRKWALFLCACSFCAGMSFTNRMWMM********************************************************************************MLKRKYFMVIGINTAFS*********************LEEAKGIIIRFVIGHSATSGGILDKAIDAEEKMHGDFLRLEHIEGYLELSAKTKTYFATAVSMWDAEFYIKVDDDVHVNLGKETFYLVLHCI*
Disordered Region (DISOPRED)
******************KWALFLCACSFCAGMSFTNRMWM***********************************AMVEQAIQSQDKRLDGLKTKIT******************************FMVIGINTAFSSRKRRDSVRATWMPQGEKRKMLEEAKGIIIRFVIGHSATSGGILDKAIDAEEKMHGDFLRLEHIEGYLELSAKTKTYFATAVSMWDAEFYIKVDDDVHVNLGKETFYLVLHCIL
Disordered Region (DISEMBL)
********EFASRNLIPRKWALFLCACSFCAGMSFTNRMWMMPESKGVARISKTEEIENPELKAVKHESNNNTEKLAMVEQAIQSQDKRLDGLKTKITAVRAERDSVSLSHPVKGTSNISGSMLKRKYFMVIGINTAFS*********ATWMPQGEKRKMLEEAKGIIIRFVIGHSATSGGILDKAIDAEEKMHGDFLRLEHIEGYLELSAKTKTYFATAVSMWDAEFYIKVDDDVHVNLGKETFYLVLHCIL
Disordered Region (DISPRO)
**************LIPRKWALFLCACSFCAGMSFTNRMWMMP*****************ELKAVKHESNNNTEKLAMVEQAIQSQDKRLDGLKTKITAVRAERD*******************KRKYFMVIGINTAFSSRKRRDSVRATWMPQGEKRKMLEEAKGIIIRFVIGHSATSGGILDKAIDAEEKMHGDFLRLEHIEGYLELSAKTKTYFATAVSMWDAEFYIKVDDDVHVNLGKETFYLVLHCIL
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MSFKSTGGEFASRNLIPRKWALFLCACSFCAGMSFTNRMWMMPESKGVARISKTEEIENPELKAVKHESNNNTEKxxxxxxxxxxxxxxxxxxxxxITAVRAERDSVSLSHPVKGTSNISGSMLKRKYFMVIGINTAFSSRKRRDSVRATWMPQGEKRKMLEEAKGIIIRFVIGHSATSGGILDKAIDAEEKMHGDFLRLEHIEGYLELSAKTKTYFATAVSMWDAEFYIKVDDDVHVNLGKETFYLVLHCIL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	253	2.2.26 [Sep-21-2011]
A8MRC7	407	Probable beta-1,3-galacto	yes	no	0.960	0.597	0.555	9e-76
Q9SAA4	384	Probable beta-1,3-galacto	no	no	0.893	0.588	0.609	1e-72
Q9ZV71	409	Probable beta-1,3-galacto	no	no	0.988	0.611	0.541	2e-68
Q8LEJ9	407	Probable beta-1,3-galacto	no	no	0.909	0.565	0.545	7e-67
Q6NQB7	393	Beta-1,3-galactosyltransf	no	no	0.893	0.575	0.487	3e-56
Q9MAP8	399	Probable beta-1,3-galacto	no	no	0.893	0.566	0.434	1e-50
Q9LM60	398	Probable beta-1,3-galacto	no	no	0.889	0.565	0.445	2e-48
Q9C809	395	Probable beta-1,3-galacto	no	no	0.845	0.541	0.482	7e-47
Q5XEZ1	346	Probable beta-1,3-galacto	no	no	0.474	0.346	0.491	3e-25
Q94A05	345	Probable beta-1,3-galacto	no	no	0.450	0.330	0.482	1e-23

>sp|A8MRC7|B3GT2_ARATH Probable beta-1,3-galactosyltransferase 2 OS=Arabidopsis thaliana GN=B3GALT2 PE=2 SV=1

 Score =  283 bits (724), Expect = 9e-76,   Method: Compositional matrix adjust.
 Identities = 141/254 (55%), Positives = 180/254 (70%), Gaps = 11/254 (4%)

Query: 8   GEFASRNLIPRKWALFLCACSFCAGMSFTNRMWMMPESKGVARISKTE--------EIEN 59
           GE++SR+ + RKW + LC  SFC GM FTNRMW +PESKG++  S TE        E  N
Sbjct: 7   GEYSSRSFVSRKWTILLCLGSFCVGMFFTNRMWNIPESKGMSHPSVTEAERLKLVSEGCN 66

Query: 60  PEL---KAVKHESNNNTEKLAMVEQAIQSQDKRLDGLKTKITAVRAERDSVSLSHPVKGT 116
           P+    K VK +      ++A    A+Q+ DK +  L+ ++ A R+ ++S+    P+   
Sbjct: 67  PKALYQKEVKRDPQALFGEVANTHIALQTLDKTISSLEMELAAARSVQESLQNGAPLSDD 126

Query: 117 SNISGSMLKRKYFMVIGINTAFSSRKRRDSVRATWMPQGEKRKMLEEAKGIIIRFVIGHS 176
                   +R++ MV+GINTAFSSRKRRDS+RATWMPQGEKRK LEE KGIIIRFVIGHS
Sbjct: 127 MGKKQPQEQRRFLMVVGINTAFSSRKRRDSIRATWMPQGEKRKRLEEEKGIIIRFVIGHS 186

Query: 177 ATSGGILDKAIDAEEKMHGDFLRLEHIEGYLELSAKTKTYFATAVSMWDAEFYIKVDDDV 236
           AT+GGILD+AI+AE++ HGDFLRL+H+EGYLELS KTKTYF+TA SMWDA+FY+KVDDDV
Sbjct: 187 ATTGGILDRAIEAEDRKHGDFLRLDHVEGYLELSGKTKTYFSTAFSMWDADFYVKVDDDV 246

Query: 237 HVNLGKETFYLVLH 250
           HVN+      LV H
Sbjct: 247 HVNIATLGETLVRH 260

Beta-1,3-galactosyltransferase that transfers galactose from UDP-galactose to substrates with a terminal glycosyl residue.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: -

>sp|Q9SAA4|B3GT1_ARATH Probable beta-1,3-galactosyltransferase 1 OS=Arabidopsis thaliana GN=B3GALT1 PE=2 SV=2

 Score =  273 bits (697), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 148/243 (60%), Positives = 173/243 (71%), Gaps = 17/243 (6%)

Query: 1   MSFKSTGG-EFASRNLIPRKWALFLCACSFCAGMSFTNRMW-MMPESKGVARISKTEEIE 58
           MSFK+ G   F  RN++ R    F+C  SFC GM FTNRMW ++PE++G++R+SK     
Sbjct: 1   MSFKNRGDYNFTPRNVVSRNSVFFMCLASFCLGMFFTNRMWNIVPEARGISRLSKLSLSS 60

Query: 59  NPELKAVKHESNNNTEKLAMVEQAIQSQDKRLDGLKTKITAVRAERDSVSLSHPVKGTSN 118
           +   K    +  NNT         I   DK +  L+ K+ A RAER+S+S      G  N
Sbjct: 61  SDCDKKNVLDYGNNT---------IGILDKSISNLEMKLVAARAERESLS------GKFN 105

Query: 119 ISGSMLKRKYFMVIGINTAFSSRKRRDSVRATWMPQGEKRKMLEEAKGIIIRFVIGHSAT 178
           IS    KRKYFMVIGINTAFSSRKRRDSVR+TWMPQGE  K LEE KGII+RFVIGHS  
Sbjct: 106 ISNEAKKRKYFMVIGINTAFSSRKRRDSVRSTWMPQGENLKKLEEEKGIIVRFVIGHSVL 165

Query: 179 SGGILDKAIDAEEKMHGDFLRLEHIEGYLELSAKTKTYFATAVSMWDAEFYIKVDDDVHV 238
           S GILDKAI+AEEK HGDFLRLEH EGY++LSAKTKT+FATAVS+WDAEFYIKVDDDVHV
Sbjct: 166 SHGILDKAIEAEEKTHGDFLRLEHTEGYMKLSAKTKTFFATAVSLWDAEFYIKVDDDVHV 225

Query: 239 NLG 241
           NL 
Sbjct: 226 NLA 228

Beta-1,3-galactosyltransferase that transfers galactose from UDP-galactose to substrates with a terminal glycosyl residue.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: -

>sp|Q9ZV71|B3GT3_ARATH Probable beta-1,3-galactosyltransferase 3 OS=Arabidopsis thaliana GN=B3GALT3 PE=2 SV=1

 Score =  259 bits (661), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 142/262 (54%), Positives = 179/262 (68%), Gaps = 12/262 (4%)

Query: 1   MSFKSTGGEFASRNLIPRKWALFLCACSFCAGMSFTNRMWMMPESKGVARISKTEEIENP 60
           MS K  G  F SR+L+ +KW   LC  SFC G+ FT+RMW++PESK + R S + E E  
Sbjct: 1   MSTKIKGELFPSRSLVSKKWTFLLCFGSFCFGILFTDRMWIIPESKDMPRPSVSTEAERL 60

Query: 61  ELKA--------VKHESNNNTEKL----AMVEQAIQSQDKRLDGLKTKITAVRAERDSVS 108
           +L +         + E N + + L    +    AIQ+ DK +  L+ ++ A R+ ++S+ 
Sbjct: 61  KLISEGCDPKTLYQKEVNRDPQALFGEVSKTHNAIQTLDKTISSLEMELAAARSAQESLV 120

Query: 109 LSHPVKGTSNISGSMLKRKYFMVIGINTAFSSRKRRDSVRATWMPQGEKRKMLEEAKGII 168
              P+           KR+Y MV+GINTAFSSRKRRDSVR TWMP GEKRK LEE KGII
Sbjct: 121 NGAPISNDMEKKQLPGKRRYLMVVGINTAFSSRKRRDSVRTTWMPSGEKRKKLEEEKGII 180

Query: 169 IRFVIGHSATSGGILDKAIDAEEKMHGDFLRLEHIEGYLELSAKTKTYFATAVSMWDAEF 228
           IRFVIGHSAT+GGILD++I+AE+K HGDFLRL+H+EGYLELS KTKTYF+TAVS WDAEF
Sbjct: 181 IRFVIGHSATAGGILDRSIEAEDKKHGDFLRLDHVEGYLELSGKTKTYFSTAVSKWDAEF 240

Query: 229 YIKVDDDVHVNLGKETFYLVLH 250
           Y+KVDDDVHVN+      LV H
Sbjct: 241 YVKVDDDVHVNIATLGETLVRH 262

Beta-1,3-galactosyltransferase that transfers galactose from UDP-galactose to substrates with a terminal glycosyl residue.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: -

>sp|Q8LEJ9|B3GT4_ARATH Probable beta-1,3-galactosyltransferase 4 OS=Arabidopsis thaliana GN=B3GALT4 PE=1 SV=1

 Score =  253 bits (647), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 131/240 (54%), Positives = 173/240 (72%), Gaps = 10/240 (4%)

Query: 11  ASRNLIPRKWALFLCACSFCAGMSFTNRMWMMPESKGVARIS---------KTEEIENPE 61
           AS++ + +KW LFLC   FCAG+ F++RMW  PES  V+R +         ++E+ ++ +
Sbjct: 14  ASKSFVSKKWTLFLCIGFFCAGILFSDRMWPEPESNVVSRDTVASDERLRLESEDCDSSK 73

Query: 62  LKAVKHESNNNTEKLAMVEQAIQSQDKRLDGLKTKITAVRAERDSVSLSHPVKGTSNISG 121
            K +K ES +    +     AIQ+ DK +  L+T++   RA ++S+    PV     +  
Sbjct: 74  -KGLKRESKDILGDVYKSPDAIQTLDKTISKLETELADARAAQESIMNGSPVSDDFKLPE 132

Query: 122 SMLKRKYFMVIGINTAFSSRKRRDSVRATWMPQGEKRKMLEEAKGIIIRFVIGHSATSGG 181
           ++ KRKY MV+G+NTAFSSRKRRDSVRATWMP GE+RK LEE KGI++RFVIGHS+T GG
Sbjct: 133 TVTKRKYLMVVGVNTAFSSRKRRDSVRATWMPPGEERKKLEEEKGIVMRFVIGHSSTPGG 192

Query: 182 ILDKAIDAEEKMHGDFLRLEHIEGYLELSAKTKTYFATAVSMWDAEFYIKVDDDVHVNLG 241
           ILD+AI AEE  HGDFLRL+H+EGYLELSAKTKTYF TA +MWDA+FY+KVDDDVHVN+ 
Sbjct: 193 ILDRAIQAEESKHGDFLRLDHVEGYLELSAKTKTYFTTAFAMWDADFYVKVDDDVHVNIA 252

Beta-1,3-galactosyltransferase that transfers galactose from UDP-galactose to substrates with a terminal glycosyl residue.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: -

>sp|Q6NQB7|B3GT7_ARATH Beta-1,3-galactosyltransferase 7 OS=Arabidopsis thaliana GN=B3GALT7 PE=2 SV=1

 Score =  218 bits (555), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 121/248 (48%), Positives = 157/248 (63%), Gaps = 22/248 (8%)

Query: 12  SRNLIPRKWALFLCACSFCAGMSFTNRMWMMPESKGVARISKTEEIENPELKAVKHESNN 71
           S+ +I  KW  FLC   F  G  FT+R W      G   IS+     + EL+ V  +  +
Sbjct: 6   SKRVISLKWVPFLCISFFALGAIFTSRSWEPSSDSGSQLISQHHR--DHELQIVSDDCAH 63

Query: 72  N---------TEKLAMVEQAIQSQDKRLDGLKTKITAVRAERDSVSLSHPVKGTSNISGS 122
           N         T ++    +AIQ  D+ LD   + +++ R+ ++ V          + S +
Sbjct: 64  NKKATQEKDVTGEVLRTHEAIQ-DDRSLDKSVSTLSSTRSSQEMV----------DGSET 112

Query: 123 MLKRKYFMVIGINTAFSSRKRRDSVRATWMPQGEKRKMLEEAKGIIIRFVIGHSATSGGI 182
             ++K FMV+GINTAFSSRKRRDSVR TWMPQGEK + LE+ KGI+I+F+IGHSATS  I
Sbjct: 113 NPRKKVFMVMGINTAFSSRKRRDSVRETWMPQGEKLERLEQEKGIVIKFMIGHSATSNSI 172

Query: 183 LDKAIDAEEKMHGDFLRLEHIEGYLELSAKTKTYFATAVSMWDAEFYIKVDDDVHVNLGK 242
           LD+AID+E+  H DFLRLEH+EGY ELSAKTK +F+TAV+ WDAEFYIKVDDDVHVNLG 
Sbjct: 173 LDRAIDSEDAQHKDFLRLEHVEGYHELSAKTKIFFSTAVAKWDAEFYIKVDDDVHVNLGM 232

Query: 243 ETFYLVLH 250
               L  H
Sbjct: 233 LASTLARH 240

Beta-1,3-galactosyltransferase that transfers galactose from UDP-galactose to substrates with a terminal glycosyl residue.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: -

>sp|Q9MAP8|B3GT6_ARATH Probable beta-1,3-galactosyltransferase 6 OS=Arabidopsis thaliana GN=B3GALT6 PE=2 SV=1

 Score =  199 bits (507), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 100/230 (43%), Positives = 144/230 (62%), Gaps = 4/230 (1%)

Query: 16  IPRKWALFLCACSFCAGMSFTNRMWMMPES-KGVARISKTEEIENPELKAV---KHESNN 71
           +  +W   LC  SF  G+   NR+    E+  G+ R S  +  ++  L  +   + +  +
Sbjct: 14  VSARWVFVLCISSFLLGVLVVNRLLASFETVDGIERASPEQNDQSRSLNPLVDCESKEGD 73

Query: 72  NTEKLAMVEQAIQSQDKRLDGLKTKITAVRAERDSVSLSHPVKGTSNISGSMLKRKYFMV 131
              +++     I++ DK +  L+ ++   RA R       P    +    S ++ + F V
Sbjct: 74  ILSRVSHTHDVIKTLDKTISSLEVELATARAARSDGRDGSPAVAKTVADQSKIRPRMFFV 133

Query: 132 IGINTAFSSRKRRDSVRATWMPQGEKRKMLEEAKGIIIRFVIGHSATSGGILDKAIDAEE 191
           +GI TAFSSRKRRDS+R TW+P+G++ K LE  KGII+RFVIGHS++ GG+LD  I+AEE
Sbjct: 134 MGIMTAFSSRKRRDSIRGTWLPKGDELKRLETEKGIIMRFVIGHSSSPGGVLDHTIEAEE 193

Query: 192 KMHGDFLRLEHIEGYLELSAKTKTYFATAVSMWDAEFYIKVDDDVHVNLG 241
           + H DF RL HIEGY ELS+KT+ YF++AV+ WDA+FYIKVDDDVHVNLG
Sbjct: 194 EQHKDFFRLNHIEGYHELSSKTQIYFSSAVAKWDADFYIKVDDDVHVNLG 243

Beta-1,3-galactosyltransferase that transfers galactose from UDP-galactose to substrates with a terminal glycosyl residue.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: -

>sp|Q9LM60|B3GT5_ARATH Probable beta-1,3-galactosyltransferase 5 OS=Arabidopsis thaliana GN=B3GALT5 PE=2 SV=1

 Score =  192 bits (488), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 107/240 (44%), Positives = 151/240 (62%), Gaps = 15/240 (6%)

Query: 20  WALFLCACSFCAGMSFTNRMWMMPESKGVARISKTEEIENPELKAV---------KHESN 70
           W   LC   F  G  FT+++       G   I   +   + ELK V         K + N
Sbjct: 15  WVPLLCISCFFLGAIFTSKLRSASSDSGSQLI--LQHRRDQELKIVTQDYAHEKKKSQDN 72

Query: 71  NNTEKLAMVEQAIQSQDKRLDGLKTKITAVRAERDSVSLSHPVKGTSNISGSMLKRKYFM 130
           +  E++    +AI+S DK +  L+ +++A  + +  V++S     T++ +    K K FM
Sbjct: 73  DVMEEVLKTHKAIESLDKSVSMLQKQLSATHSPQQIVNVS----ATNSSTEGNQKNKVFM 128

Query: 131 VIGINTAFSSRKRRDSVRATWMPQGEKRKMLEEAKGIIIRFVIGHSATSGGILDKAIDAE 190
           VIGINTAFSSRKRRDS+R TWMPQGEK + LE+ KGI+++F+IGHS+T   +LDK ID+E
Sbjct: 129 VIGINTAFSSRKRRDSLRETWMPQGEKLEKLEKEKGIVVKFMIGHSSTPNSMLDKEIDSE 188

Query: 191 EKMHGDFLRLEHIEGYLELSAKTKTYFATAVSMWDAEFYIKVDDDVHVNLGKETFYLVLH 250
           +  + DF RL+H+EGY  LSAKTK++F++AV+ WDAEFY+K+DDDVHVNLG     L  H
Sbjct: 189 DAQYNDFFRLDHVEGYYNLSAKTKSFFSSAVAKWDAEFYVKIDDDVHVNLGTLASTLASH 248

Beta-1,3-galactosyltransferase that transfers galactose from UDP-galactose to substrates with a terminal glycosyl residue.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: -

>sp|Q9C809|B3GT8_ARATH Probable beta-1,3-galactosyltransferase 8 OS=Arabidopsis thaliana GN=B3GALT8 PE=2 SV=1

 Score =  187 bits (474), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 112/232 (48%), Positives = 152/232 (65%), Gaps = 18/232 (7%)

Query: 22  LFLCACSFCAGMSFTNRMW---MMPESKG---VARISKTEEIENP----ELKAVKHESNN 71
           + LC  SF AG  F +R      +PE +       +SK  EI+      + K ++ +S +
Sbjct: 12  IVLCLASFLAGSLFMSRTLSRSYIPEEEDHHLTKHLSKHLEIQKDCDEHKRKLIESKSRD 71

Query: 72  NTEKLAMVEQAIQSQDKRLDGLKTKITAVR-AERDSVSLSH-PVKGTSNISGSMLKRKYF 129
              +++   QA++S ++ +  L+ ++ A R ++R S   S    K  S +      +K F
Sbjct: 72  IIGEVSRTHQAVKSLERTMSTLEMELAAARTSDRSSEFWSERSAKNQSRL------QKVF 125

Query: 130 MVIGINTAFSSRKRRDSVRATWMPQGEKRKMLEEAKGIIIRFVIGHSATSGGILDKAIDA 189
            VIGINTAFSS+KRRDSVR TWMP GEK K +E+ KGI++RFVIGHSAT GG+LDKAID 
Sbjct: 126 AVIGINTAFSSKKRRDSVRQTWMPTGEKLKKIEKEKGIVVRFVIGHSATPGGVLDKAIDE 185

Query: 190 EEKMHGDFLRLEHIEGYLELSAKTKTYFATAVSMWDAEFYIKVDDDVHVNLG 241
           E+  H DFLRL+HIEGY +LS KT+ YF+TA +M+DAEFY+KVDDDVHVNLG
Sbjct: 186 EDSEHKDFLRLKHIEGYHQLSTKTRLYFSTATAMYDAEFYVKVDDDVHVNLG 237

Beta-1,3-galactosyltransferase that transfers galactose from UDP-galactose to substrates with a terminal glycosyl residue.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: -

>sp|Q5XEZ1|B3GT9_ARATH Probable beta-1,3-galactosyltransferase 9 OS=Arabidopsis thaliana GN=B3GALT9 PE=2 SV=1

 Score =  115 bits (288), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 60/122 (49%), Positives = 80/122 (65%), Gaps = 2/122 (1%)

Query: 120 SGSMLKRKYFMVIGINTAFSSRKRRDSVRATWMPQGEKRKMLEEAKGIIIRFVIGHSATS 179
           SGS   +K   VIG+ + F S  RR++ R ++MPQG+  + LEE +GI+IRFVIG S   
Sbjct: 111 SGSSSGKKLLAVIGVYSGFGSHLRRNTFRGSYMPQGDALRKLEE-RGIVIRFVIGRSPNR 169

Query: 180 GGILDKAIDAEEKMHGDFLRLE-HIEGYLELSAKTKTYFATAVSMWDAEFYIKVDDDVHV 238
           G  LD+ ID E +   DFL LE H E   EL+ K K +F+ AV  WDAEFYIKVDD++ +
Sbjct: 170 GDSLDRKIDEENQARKDFLILENHEEAQEELAKKVKFFFSAAVQNWDAEFYIKVDDNIDL 229

Query: 239 NL 240
           +L
Sbjct: 230 DL 231

Beta-1,3-galactosyltransferase that transfers galactose from UDP-galactose to substrates with a terminal glycosyl residue.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: -

>sp|Q94A05|B3GTA_ARATH Probable beta-1,3-galactosyltransferase 10 OS=Arabidopsis thaliana GN=B3GALT10 PE=2 SV=1

 Score =  110 bits (275), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 56/116 (48%), Positives = 75/116 (64%), Gaps = 2/116 (1%)

Query: 126 RKYFMVIGINTAFSSRKRRDSVRATWMPQGEKRKMLEEAKGIIIRFVIGHSATSGGILDK 185
           +K   VIG+ T F S  +R+  R +WMP+ +  K LEE +G++IRFVIG SA  G  LD+
Sbjct: 116 KKMLAVIGVYTGFGSHLKRNKFRGSWMPRDDALKKLEE-RGVVIRFVIGRSANRGDSLDR 174

Query: 186 AIDAEEKMHGDFLRLE-HIEGYLELSAKTKTYFATAVSMWDAEFYIKVDDDVHVNL 240
            ID E +   DFL LE H E   EL  K K +++ AV  WDAEFY+KVDD+V ++L
Sbjct: 175 KIDEENRATKDFLILENHEEAQEELPKKVKFFYSAAVQNWDAEFYVKVDDNVDLDL 230

Beta-1,3-galactosyltransferase that transfers galactose from UDP-galactose to substrates with a terminal glycosyl residue.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	253
359494044	405	PREDICTED: probable beta-1,3-galactosylt	0.988	0.617	0.581	2e-81
359494046	411	PREDICTED: probable beta-1,3-galactosylt	0.988	0.608	0.568	2e-79
224128958	405	predicted protein [Populus trichocarpa]	0.988	0.617	0.569	5e-79
15220440	404	putative beta-1,3-galactosyltransferase	0.960	0.601	0.561	1e-75
359483432	406	PREDICTED: probable beta-1,3-galactosylt	0.952	0.593	0.596	1e-74
297848780	407	galactosyltransferase family protein [Ar	0.956	0.594	0.561	5e-74
145323746	407	putative beta-1,3-galactosyltransferase	0.960	0.597	0.555	5e-74
302144134	408	unnamed protein product [Vitis vinifera]	0.952	0.590	0.591	4e-73
326487966	399	predicted protein [Hordeum vulgare subsp	0.940	0.596	0.561	4e-73
225447013	407	PREDICTED: probable beta-1,3-galactosylt	0.984	0.611	0.586	7e-73

>gi|359494044|ref|XP_002279814.2| PREDICTED: probable beta-1,3-galactosyltransferase 2-like isoform 1 [Vitis vinifera] gi|297737446|emb|CBI26647.3| unnamed protein product [Vitis vinifera]

 Score =  307 bits (787), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 150/258 (58%), Positives = 191/258 (74%), Gaps = 8/258 (3%)

Query: 1   MSFKSTGGEFASRNLIPRKWALFLCACSFCAGMSFTNRMWMMPESKGVARISKTEEIE-- 58
           MS+KS G E +S++++ RKW L  C   FCAGM F++RMW MPE+KG++R ++TE+ E  
Sbjct: 1   MSWKSRGIEPSSKSVVSRKWTLLFCIGCFCAGMLFSDRMWTMPEAKGISRTTRTEDEELK 60

Query: 59  ------NPELKAVKHESNNNTEKLAMVEQAIQSQDKRLDGLKTKITAVRAERDSVSLSHP 112
                  P  K VKH+S +   +++    AIQ+ DK +  L+ ++ A RA ++S+    P
Sbjct: 61  LVSEGCAPTTKDVKHKSKDILGEVSRTHYAIQTLDKTISNLEMELAAARAAQESILNGSP 120

Query: 113 VKGTSNISGSMLKRKYFMVIGINTAFSSRKRRDSVRATWMPQGEKRKMLEEAKGIIIRFV 172
           +     I+ S  +RKY MVIGINTAFSSRKRRDSVRATWMPQG+KRK LEE KGII+RFV
Sbjct: 121 ITEDLPITKSSGRRKYLMVIGINTAFSSRKRRDSVRATWMPQGDKRKKLEEEKGIIVRFV 180

Query: 173 IGHSATSGGILDKAIDAEEKMHGDFLRLEHIEGYLELSAKTKTYFATAVSMWDAEFYIKV 232
           IGHSATSGGILD+AI+AE++ HGDFLRLEH+EGYLELSAKTK YFATAV+MWDA+FY+KV
Sbjct: 181 IGHSATSGGILDRAIEAEDRRHGDFLRLEHVEGYLELSAKTKAYFATAVAMWDADFYVKV 240

Query: 233 DDDVHVNLGKETFYLVLH 250
           DDDVHVN+      L  H
Sbjct: 241 DDDVHVNIATLGATLARH 258

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359494046|ref|XP_002279828.2| PREDICTED: probable beta-1,3-galactosyltransferase 2-like isoform 2 [Vitis vinifera]

 Score =  301 bits (770), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 150/264 (56%), Positives = 191/264 (72%), Gaps = 14/264 (5%)

Query: 1   MSFKSTGGEFASRNLIPRKWALFLCACSFCAGMSFTNRMWMMPESKGVARISKTEEIE-- 58
           MS+KS G E +S++++ RKW L  C   FCAGM F++RMW MPE+KG++R ++TE+ E  
Sbjct: 1   MSWKSRGIEPSSKSVVSRKWTLLFCIGCFCAGMLFSDRMWTMPEAKGISRTTRTEDEELK 60

Query: 59  ------NPEL------KAVKHESNNNTEKLAMVEQAIQSQDKRLDGLKTKITAVRAERDS 106
                  P        K VKH+S +   +++    AIQ+ DK +  L+ ++ A RA ++S
Sbjct: 61  LVSEGCAPTTVSISVQKDVKHKSKDILGEVSRTHYAIQTLDKTISNLEMELAAARAAQES 120

Query: 107 VSLSHPVKGTSNISGSMLKRKYFMVIGINTAFSSRKRRDSVRATWMPQGEKRKMLEEAKG 166
           +    P+     I+ S  +RKY MVIGINTAFSSRKRRDSVRATWMPQG+KRK LEE KG
Sbjct: 121 ILNGSPITEDLPITKSSGRRKYLMVIGINTAFSSRKRRDSVRATWMPQGDKRKKLEEEKG 180

Query: 167 IIIRFVIGHSATSGGILDKAIDAEEKMHGDFLRLEHIEGYLELSAKTKTYFATAVSMWDA 226
           II+RFVIGHSATSGGILD+AI+AE++ HGDFLRLEH+EGYLELSAKTK YFATAV+MWDA
Sbjct: 181 IIVRFVIGHSATSGGILDRAIEAEDRRHGDFLRLEHVEGYLELSAKTKAYFATAVAMWDA 240

Query: 227 EFYIKVDDDVHVNLGKETFYLVLH 250
           +FY+KVDDDVHVN+      L  H
Sbjct: 241 DFYVKVDDDVHVNIATLGATLARH 264

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224128958|ref|XP_002320464.1| predicted protein [Populus trichocarpa] gi|222861237|gb|EEE98779.1| predicted protein [Populus trichocarpa]

 Score =  300 bits (767), Expect = 5e-79,   Method: Compositional matrix adjust.
 Identities = 147/258 (56%), Positives = 186/258 (72%), Gaps = 8/258 (3%)

Query: 1   MSFKSTGGEFASRNLIPRKWALFLCACSFCAGMSFTNRMWMMPESKGVARISKTE----- 55
           MSFKS G + +S+N+I +KWALF C   FCAG+ F NRMW +PE KG+ R +  E     
Sbjct: 1   MSFKSRGDQQSSKNVISKKWALFFCLACFCAGVFFNNRMWTVPEPKGITRTTTMEAESLK 60

Query: 56  ---EIENPELKAVKHESNNNTEKLAMVEQAIQSQDKRLDGLKTKITAVRAERDSVSLSHP 112
              E    E+K VK +S +   ++     AIQ+ DK +  L+ ++ A RA ++S+    P
Sbjct: 61  LVSEGCGDEIKEVKRDSKDIIGEVYKTHNAIQTLDKTISNLEMELAAARAAQESILSGSP 120

Query: 113 VKGTSNISGSMLKRKYFMVIGINTAFSSRKRRDSVRATWMPQGEKRKMLEEAKGIIIRFV 172
           +      +GS  KR+Y MV+GINTAFSSRKRRDSVRATW PQGEKRK LE+ KGII+RFV
Sbjct: 121 LSEDLKRTGSSGKRRYLMVVGINTAFSSRKRRDSVRATWFPQGEKRKKLEDEKGIIVRFV 180

Query: 173 IGHSATSGGILDKAIDAEEKMHGDFLRLEHIEGYLELSAKTKTYFATAVSMWDAEFYIKV 232
           IGHSATSGGILD+AI+AE++ HGDFLRL+H+EGYLELSAKTK YFATAV++WDA+FY+KV
Sbjct: 181 IGHSATSGGILDRAIEAEDRKHGDFLRLDHVEGYLELSAKTKIYFATAVALWDADFYVKV 240

Query: 233 DDDVHVNLGKETFYLVLH 250
           DDDVHVN+      LV H
Sbjct: 241 DDDVHVNIATLGETLVRH 258

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15220440|ref|NP_172009.1| putative beta-1,3-galactosyltransferase 2 [Arabidopsis thaliana] gi|14488078|gb|AAK63859.1|AF389287_1 At1g05170/YUP8H12_22 [Arabidopsis thaliana] gi|2388580|gb|AAB71461.1| Similar to Sequence 10 from patent 5477002 (gb|1253956) [Arabidopsis thaliana] gi|21360399|gb|AAM47315.1| At1g05170/YUP8H12_22 [Arabidopsis thaliana] gi|332189676|gb|AEE27797.1| putative beta-1,3-galactosyltransferase 2 [Arabidopsis thaliana]

 Score =  288 bits (738), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 141/251 (56%), Positives = 180/251 (71%), Gaps = 8/251 (3%)

Query: 8   GEFASRNLIPRKWALFLCACSFCAGMSFTNRMWMMPESKGVARISKTE--------EIEN 59
           GE++SR+ + RKW + LC  SFC GM FTNRMW +PESKG++  S TE        E  N
Sbjct: 7   GEYSSRSFVSRKWTILLCLGSFCVGMFFTNRMWNIPESKGMSHPSVTEAERLKLVSEGCN 66

Query: 60  PELKAVKHESNNNTEKLAMVEQAIQSQDKRLDGLKTKITAVRAERDSVSLSHPVKGTSNI 119
           P+ K VK +      ++A    A+Q+ DK +  L+ ++ A R+ ++S+    P+      
Sbjct: 67  PKAKEVKRDPQALFGEVANTHIALQTLDKTISSLEMELAAARSVQESLQNGAPLSDDMGK 126

Query: 120 SGSMLKRKYFMVIGINTAFSSRKRRDSVRATWMPQGEKRKMLEEAKGIIIRFVIGHSATS 179
                +R++ MV+GINTAFSSRKRRDS+RATWMPQGEKRK LEE KGIIIRFVIGHSAT+
Sbjct: 127 KQPQEQRRFLMVVGINTAFSSRKRRDSIRATWMPQGEKRKRLEEEKGIIIRFVIGHSATT 186

Query: 180 GGILDKAIDAEEKMHGDFLRLEHIEGYLELSAKTKTYFATAVSMWDAEFYIKVDDDVHVN 239
           GGILD+AI+AE++ HGDFLRL+H+EGYLELS KTKTYF+TA SMWDA+FY+KVDDDVHVN
Sbjct: 187 GGILDRAIEAEDRKHGDFLRLDHVEGYLELSGKTKTYFSTAFSMWDADFYVKVDDDVHVN 246

Query: 240 LGKETFYLVLH 250
           +      LV H
Sbjct: 247 IATLGETLVRH 257

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359483432|ref|XP_002269104.2| PREDICTED: probable beta-1,3-galactosyltransferase 2-like [Vitis vinifera]

 Score =  285 bits (729), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 149/250 (59%), Positives = 189/250 (75%), Gaps = 9/250 (3%)

Query: 1   MSFKSTGG-EFASRNLIPRKWALFLCACSFCAGMSFTNRMWMMPESKGVARIS--KTEEI 57
           M  K+ GG E+ S++++ R  AL LC  SFCAGM FTNRMW   E+K   R++  K E I
Sbjct: 1   MYLKNRGGTEYPSKSVVSRNLALLLCLSSFCAGMFFTNRMWAAFEAKDTERMTGIKDERI 60

Query: 58  E------NPELKAVKHESNNNTEKLAMVEQAIQSQDKRLDGLKTKITAVRAERDSVSLSH 111
           +       P+LK ++H+SNN   +++    A+Q+ DK +  L+ ++ A RA ++SV    
Sbjct: 61  KLASEGCTPKLKVIRHKSNNILGEVSKTHHAVQTLDKTISNLEMELAAARAAQESVLNDS 120

Query: 112 PVKGTSNISGSMLKRKYFMVIGINTAFSSRKRRDSVRATWMPQGEKRKMLEEAKGIIIRF 171
            +    N++ S  KRKY MVIGINTAFSSRKRRDSVRATWMPQGEKRK LEE KGI+IRF
Sbjct: 121 LISEDHNVAESTKKRKYLMVIGINTAFSSRKRRDSVRATWMPQGEKRKKLEEEKGIVIRF 180

Query: 172 VIGHSATSGGILDKAIDAEEKMHGDFLRLEHIEGYLELSAKTKTYFATAVSMWDAEFYIK 231
           VIGHS+TSGGILDKAI+AEE+MHGDFLRL+H+EGYLELS KTKTYF+TAV++WDA+FY+K
Sbjct: 181 VIGHSSTSGGILDKAIEAEERMHGDFLRLDHVEGYLELSGKTKTYFSTAVALWDADFYVK 240

Query: 232 VDDDVHVNLG 241
           VDDDVHVN+G
Sbjct: 241 VDDDVHVNIG 250

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297848780|ref|XP_002892271.1| galactosyltransferase family protein [Arabidopsis lyrata subsp. lyrata] gi|297338113|gb|EFH68530.1| galactosyltransferase family protein [Arabidopsis lyrata subsp. lyrata]

 Score =  283 bits (724), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 142/253 (56%), Positives = 179/253 (70%), Gaps = 11/253 (4%)

Query: 9   EFASRNLIPRKWALFLCACSFCAGMSFTNRMWMMPESKGVARISKTE--------EIENP 60
           E+ SR+ + RKW + LC  SFC GM FT+RMW +PESKG++R S TE        E  NP
Sbjct: 8   EYTSRSFVSRKWTILLCLGSFCVGMFFTDRMWNIPESKGMSRPSVTEAERLKLISEGCNP 67

Query: 61  EL---KAVKHESNNNTEKLAMVEQAIQSQDKRLDGLKTKITAVRAERDSVSLSHPVKGTS 117
           +    K VK +      ++A    A+Q+ DK +  L+ ++ A R+ ++S+    PV    
Sbjct: 68  KTLYQKEVKRDPQALFGEVANTHIALQTLDKTISSLEMELAAARSVQESLQNGAPVSDDM 127

Query: 118 NISGSMLKRKYFMVIGINTAFSSRKRRDSVRATWMPQGEKRKMLEEAKGIIIRFVIGHSA 177
                  KR++ MV+GINTAFSSRKRRDS+RATWMPQGEKRK LEE KGIIIRFVIGHSA
Sbjct: 128 GKKQPQGKRRFLMVVGINTAFSSRKRRDSIRATWMPQGEKRKRLEEEKGIIIRFVIGHSA 187

Query: 178 TSGGILDKAIDAEEKMHGDFLRLEHIEGYLELSAKTKTYFATAVSMWDAEFYIKVDDDVH 237
           T+GGILD+AI+AE++ HGDFLRL+H+EGYLELS KTKTYF+TA SMWDA+FY+KVDDDVH
Sbjct: 188 TTGGILDRAIEAEDRKHGDFLRLDHVEGYLELSGKTKTYFSTAFSMWDADFYVKVDDDVH 247

Query: 238 VNLGKETFYLVLH 250
           VN+      LV H
Sbjct: 248 VNIATLGETLVRH 260

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|145323746|ref|NP_001077462.1| putative beta-1,3-galactosyltransferase 2 [Arabidopsis thaliana] gi|221222586|sp|A8MRC7.1|B3GT2_ARATH RecName: Full=Probable beta-1,3-galactosyltransferase 2 gi|332189677|gb|AEE27798.1| putative beta-1,3-galactosyltransferase 2 [Arabidopsis thaliana]

 Score =  283 bits (724), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 141/254 (55%), Positives = 180/254 (70%), Gaps = 11/254 (4%)

Query: 8   GEFASRNLIPRKWALFLCACSFCAGMSFTNRMWMMPESKGVARISKTE--------EIEN 59
           GE++SR+ + RKW + LC  SFC GM FTNRMW +PESKG++  S TE        E  N
Sbjct: 7   GEYSSRSFVSRKWTILLCLGSFCVGMFFTNRMWNIPESKGMSHPSVTEAERLKLVSEGCN 66

Query: 60  PEL---KAVKHESNNNTEKLAMVEQAIQSQDKRLDGLKTKITAVRAERDSVSLSHPVKGT 116
           P+    K VK +      ++A    A+Q+ DK +  L+ ++ A R+ ++S+    P+   
Sbjct: 67  PKALYQKEVKRDPQALFGEVANTHIALQTLDKTISSLEMELAAARSVQESLQNGAPLSDD 126

Query: 117 SNISGSMLKRKYFMVIGINTAFSSRKRRDSVRATWMPQGEKRKMLEEAKGIIIRFVIGHS 176
                   +R++ MV+GINTAFSSRKRRDS+RATWMPQGEKRK LEE KGIIIRFVIGHS
Sbjct: 127 MGKKQPQEQRRFLMVVGINTAFSSRKRRDSIRATWMPQGEKRKRLEEEKGIIIRFVIGHS 186

Query: 177 ATSGGILDKAIDAEEKMHGDFLRLEHIEGYLELSAKTKTYFATAVSMWDAEFYIKVDDDV 236
           AT+GGILD+AI+AE++ HGDFLRL+H+EGYLELS KTKTYF+TA SMWDA+FY+KVDDDV
Sbjct: 187 ATTGGILDRAIEAEDRKHGDFLRLDHVEGYLELSGKTKTYFSTAFSMWDADFYVKVDDDV 246

Query: 237 HVNLGKETFYLVLH 250
           HVN+      LV H
Sbjct: 247 HVNIATLGETLVRH 260

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|302144134|emb|CBI23239.3| unnamed protein product [Vitis vinifera]

 Score =  280 bits (716), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 149/252 (59%), Positives = 189/252 (75%), Gaps = 11/252 (4%)

Query: 1   MSFKSTGG-EFASRNLIPRKWALFLCACSFCAGMSFTNRMWMMPESKGVARIS--KTEEI 57
           M  K+ GG E+ S++++ R  AL LC  SFCAGM FTNRMW   E+K   R++  K E I
Sbjct: 1   MYLKNRGGTEYPSKSVVSRNLALLLCLSSFCAGMFFTNRMWAAFEAKDTERMTGIKDERI 60

Query: 58  E------NPEL--KAVKHESNNNTEKLAMVEQAIQSQDKRLDGLKTKITAVRAERDSVSL 109
           +       P+L  K ++H+SNN   +++    A+Q+ DK +  L+ ++ A RA ++SV  
Sbjct: 61  KLASEGCTPKLASKVIRHKSNNILGEVSKTHHAVQTLDKTISNLEMELAAARAAQESVLN 120

Query: 110 SHPVKGTSNISGSMLKRKYFMVIGINTAFSSRKRRDSVRATWMPQGEKRKMLEEAKGIII 169
              +    N++ S  KRKY MVIGINTAFSSRKRRDSVRATWMPQGEKRK LEE KGI+I
Sbjct: 121 DSLISEDHNVAESTKKRKYLMVIGINTAFSSRKRRDSVRATWMPQGEKRKKLEEEKGIVI 180

Query: 170 RFVIGHSATSGGILDKAIDAEEKMHGDFLRLEHIEGYLELSAKTKTYFATAVSMWDAEFY 229
           RFVIGHS+TSGGILDKAI+AEE+MHGDFLRL+H+EGYLELS KTKTYF+TAV++WDA+FY
Sbjct: 181 RFVIGHSSTSGGILDKAIEAEERMHGDFLRLDHVEGYLELSGKTKTYFSTAVALWDADFY 240

Query: 230 IKVDDDVHVNLG 241
           +KVDDDVHVN+G
Sbjct: 241 VKVDDDVHVNIG 252

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|326487966|dbj|BAJ89822.1| predicted protein [Hordeum vulgare subsp. vulgare] gi|326528181|dbj|BAJ89142.1| predicted protein [Hordeum vulgare subsp. vulgare]

 Score =  280 bits (716), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 141/251 (56%), Positives = 177/251 (70%), Gaps = 13/251 (5%)

Query: 7   GGEFASRNLIPRKWALFLCACSFCAGMSFTNRMWMMPESKGVARISKTE-------EIEN 59
           G E   R  I RKW   LC  SFC G+ FTNRMW +PESK + R S  E          +
Sbjct: 8   GDELLFRGTISRKWTSLLCLSSFCVGLIFTNRMWTVPESKEIIRRSALELDKMNLVSSSD 67

Query: 60  PELKAVKHESNNNTEKLAMVEQAIQSQDKRLDGLKTKITAVRAERDSVSLSHPVKGTSNI 119
             LK++ +E  ++  ++  +E AIQ+ DK +  L+ ++ + +A +DS+     + G    
Sbjct: 68  CALKSI-NEPRDDIGQVQRIEDAIQTLDKTISNLEMELASAKATQDSI-----LNGGVPS 121

Query: 120 SGSMLKRKYFMVIGINTAFSSRKRRDSVRATWMPQGEKRKMLEEAKGIIIRFVIGHSATS 179
           S    KRKYFMVIGINTAFSSRKRRDSVRATWMPQGEKR+ +EE KGII+RFVIGHSATS
Sbjct: 122 SEPTAKRKYFMVIGINTAFSSRKRRDSVRATWMPQGEKRRKMEEEKGIIVRFVIGHSATS 181

Query: 180 GGILDKAIDAEEKMHGDFLRLEHIEGYLELSAKTKTYFATAVSMWDAEFYIKVDDDVHVN 239
           GGILD+AIDAE++ HGDFLRL+H+EGYLEL+AKTK+YFA AVSMWDAE+++KVDDDVHVN
Sbjct: 182 GGILDRAIDAEDRKHGDFLRLDHVEGYLELAAKTKSYFAKAVSMWDAEYFVKVDDDVHVN 241

Query: 240 LGKETFYLVLH 250
           +      L  H
Sbjct: 242 IATLGGILARH 252

Source: Hordeum vulgare subsp. vulgare

Species: Hordeum vulgare

Genus: Hordeum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225447013|ref|XP_002268282.1| PREDICTED: probable beta-1,3-galactosyltransferase 2 [Vitis vinifera] gi|297739150|emb|CBI28801.3| unnamed protein product [Vitis vinifera]

 Score =  279 bits (714), Expect = 7e-73,   Method: Compositional matrix adjust.
 Identities = 153/261 (58%), Positives = 186/261 (71%), Gaps = 12/261 (4%)

Query: 1   MSFKSTGGEFASRNLIPRKWALFLCACSFCAGMSFTNRMWMMPESKGVARISKTE----- 55
           MS KS G E  SR++I +KW L LC   FCAGM FTNRMW +PESKG+ R +  E     
Sbjct: 1   MSLKSRG-ELPSRSVISQKWTLLLCVGCFCAGMFFTNRMWAVPESKGITRTTAVEAEKLK 59

Query: 56  ---EIENP---ELKAVKHESNNNTEKLAMVEQAIQSQDKRLDGLKTKITAVRAERDSVSL 109
              E  +P   + K VK +S +   ++     AIQ+ DK +  L+ ++ A RA ++S+  
Sbjct: 60  LVSEGCDPKTLQQKFVKRDSKDIIGEVHKTHHAIQTLDKTISNLEMELAAARAAQESMVN 119

Query: 110 SHPVKGTSNISGSMLKRKYFMVIGINTAFSSRKRRDSVRATWMPQGEKRKMLEEAKGIII 169
             P+      + S  +++Y MV+GINTAFSSRKRRDSVRATWMPQGEKRK LEE KGIII
Sbjct: 120 GSPISEDLQKTESSGRKRYLMVVGINTAFSSRKRRDSVRATWMPQGEKRKKLEEEKGIII 179

Query: 170 RFVIGHSATSGGILDKAIDAEEKMHGDFLRLEHIEGYLELSAKTKTYFATAVSMWDAEFY 229
           RFVIGHSATSGGILD+AI+AE+K HGDFLRLEH+EGYLELSAKTK YFATAV++WDAEFY
Sbjct: 180 RFVIGHSATSGGILDRAIEAEDKKHGDFLRLEHVEGYLELSAKTKIYFATAVALWDAEFY 239

Query: 230 IKVDDDVHVNLGKETFYLVLH 250
           IKVDDDVHVN+      LV H
Sbjct: 240 IKVDDDVHVNIATLGETLVRH 260

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	253
TAIR|locus:2207225	407	AT1G05170 [Arabidopsis thalian	0.960	0.597	0.555	1.8e-69
TAIR|locus:2027352	384	AT1G11730 [Arabidopsis thalian	0.889	0.585	0.611	4.9e-69
TAIR|locus:2062545	409	AT2G32430 [Arabidopsis thalian	0.988	0.611	0.545	9.2e-68
TAIR|locus:2116452	407	AT4G26940 [Arabidopsis thalian	0.909	0.565	0.554	2.2e-66
TAIR|locus:2029471	393	AT1G77810 [Arabidopsis thalian	0.905	0.582	0.510	3e-53
TAIR|locus:505006138	398	DD46 [Arabidopsis thaliana (ta	0.889	0.565	0.45	8.5e-49
TAIR|locus:2038031	399	AT1G32930 [Arabidopsis thalian	0.893	0.566	0.447	2.9e-48
TAIR|locus:2154247	338	AT5G53340 [Arabidopsis thalian	0.802	0.600	0.35	1.4e-25
TAIR|locus:2059531	346	AT2G25300 [Arabidopsis thalian	0.474	0.346	0.491	9.7e-25
TAIR|locus:2116627	345	AT4G32120 [Arabidopsis thalian	0.573	0.420	0.416	4.2e-24

TAIR|locus:2207225 AT1G05170 [Arabidopsis thaliana (taxid:3702)]

 Score = 704 (252.9 bits), Expect = 1.8e-69, P = 1.8e-69
 Identities = 141/254 (55%), Positives = 180/254 (70%)

Query:     8 GEFASRNLIPRKWALFLCACSFCAGMSFTNRMWMMPESKGVARISKTE--------EIEN 59
             GE++SR+ + RKW + LC  SFC GM FTNRMW +PESKG++  S TE        E  N
Sbjct:     7 GEYSSRSFVSRKWTILLCLGSFCVGMFFTNRMWNIPESKGMSHPSVTEAERLKLVSEGCN 66

Query:    60 PEL---KAVKHESNNNTEKLAMVEQAIQSQDKRLDGLKTKITAVRAERDSVSLSHPVKGT 116
             P+    K VK +      ++A    A+Q+ DK +  L+ ++ A R+ ++S+    P+   
Sbjct:    67 PKALYQKEVKRDPQALFGEVANTHIALQTLDKTISSLEMELAAARSVQESLQNGAPLSDD 126

Query:   117 SNISGSMLKRKYFMVIGINTAFSSRKRRDSVRATWMPQGEKRKMLEEAKGIIIRFVIGHS 176
                     +R++ MV+GINTAFSSRKRRDS+RATWMPQGEKRK LEE KGIIIRFVIGHS
Sbjct:   127 MGKKQPQEQRRFLMVVGINTAFSSRKRRDSIRATWMPQGEKRKRLEEEKGIIIRFVIGHS 186

Query:   177 ATSGGILDKAIDAEEKMHGDFLRLEHIEGYLELSAKTKTYFATAVSMWDAEFYIKVDDDV 236
             AT+GGILD+AI+AE++ HGDFLRL+H+EGYLELS KTKTYF+TA SMWDA+FY+KVDDDV
Sbjct:   187 ATTGGILDRAIEAEDRKHGDFLRLDHVEGYLELSGKTKTYFSTAFSMWDADFYVKVDDDV 246

Query:   237 HVNLGKETFYLVLH 250
             HVN+      LV H
Sbjct:   247 HVNIATLGETLVRH 260

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0006486 "protein glycosylation" evidence=IEA

GO:0008378 "galactosyltransferase activity" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS

GO:0016758 "transferase activity, transferring hexosyl groups" evidence=ISS

TAIR|locus:2027352 AT1G11730 [Arabidopsis thaliana (taxid:3702)]

 Score = 700 (251.5 bits), Expect = 4.9e-69, P = 4.9e-69
 Identities = 148/242 (61%), Positives = 173/242 (71%)

Query:     1 MSFKSTGG-EFASRNLIPRKWALFLCACSFCAGMSFTNRMW-MMPESKGVARISKTEEIE 58
             MSFK+ G   F  RN++ R    F+C  SFC GM FTNRMW ++PE++G++R+SK     
Sbjct:     1 MSFKNRGDYNFTPRNVVSRNSVFFMCLASFCLGMFFTNRMWNIVPEARGISRLSKLSLSS 60

Query:    59 NPELKAVKHESNNNTEKLAMVEQAIQSQDKRLDGLKTKITAVRAERDSVSLSHPVKGTSN 118
             +   K    +  NNT         I   DK +  L+ K+ A RAER+S+S      G  N
Sbjct:    61 SDCDKKNVLDYGNNT---------IGILDKSISNLEMKLVAARAERESLS------GKFN 105

Query:   119 ISGSMLKRKYFMVIGINTAFSSRKRRDSVRATWMPQGEKRKMLEEAKGIIIRFVIGHSAT 178
             IS    KRKYFMVIGINTAFSSRKRRDSVR+TWMPQGE  K LEE KGII+RFVIGHS  
Sbjct:   106 ISNEAKKRKYFMVIGINTAFSSRKRRDSVRSTWMPQGENLKKLEEEKGIIVRFVIGHSVL 165

Query:   179 SGGILDKAIDAEEKMHGDFLRLEHIEGYLELSAKTKTYFATAVSMWDAEFYIKVDDDVHV 238
             S GILDKAI+AEEK HGDFLRLEH EGY++LSAKTKT+FATAVS+WDAEFYIKVDDDVHV
Sbjct:   166 SHGILDKAIEAEEKTHGDFLRLEHTEGYMKLSAKTKTFFATAVSLWDAEFYIKVDDDVHV 225

Query:   239 NL 240
             NL
Sbjct:   226 NL 227

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0006486 "protein glycosylation" evidence=IEA

GO:0008378 "galactosyltransferase activity" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS

GO:0016758 "transferase activity, transferring hexosyl groups" evidence=ISS

TAIR|locus:2062545 AT2G32430 [Arabidopsis thaliana (taxid:3702)]

 Score = 688 (247.2 bits), Expect = 9.2e-68, P = 9.2e-68
 Identities = 143/262 (54%), Positives = 180/262 (68%)

Query:     1 MSFKSTGGEFASRNLIPRKWALFLCACSFCAGMSFTNRMWMMPESKGVARISKTEEIENP 60
             MS K  G  F SR+L+ +KW   LC  SFC G+ FT+RMW++PESK + R S + E E  
Sbjct:     1 MSTKIKGELFPSRSLVSKKWTFLLCFGSFCFGILFTDRMWIIPESKDMPRPSVSTEAERL 60

Query:    61 EL-------KAV-KHESNNNTEKL----AMVEQAIQSQDKRLDGLKTKITAVRAERDSVS 108
             +L       K + + E N + + L    +    AIQ+ DK +  L+ ++ A R+ ++S+ 
Sbjct:    61 KLISEGCDPKTLYQKEVNRDPQALFGEVSKTHNAIQTLDKTISSLEMELAAARSAQESLV 120

Query:   109 LSHPVKGTSNISGSMLKRKYFMVIGINTAFSSRKRRDSVRATWMPQGEKRKMLEEAKGII 168
                P+           KR+Y MV+GINTAFSSRKRRDSVR TWMP GEKRK LEE KGII
Sbjct:   121 NGAPISNDMEKKQLPGKRRYLMVVGINTAFSSRKRRDSVRTTWMPSGEKRKKLEEEKGII 180

Query:   169 IRFVIGHSATSGGILDKAIDAEEKMHGDFLRLEHIEGYLELSAKTKTYFATAVSMWDAEF 228
             IRFVIGHSAT+GGILD++I+AE+K HGDFLRL+H+EGYLELS KTKTYF+TAVS WDAEF
Sbjct:   181 IRFVIGHSATAGGILDRSIEAEDKKHGDFLRLDHVEGYLELSGKTKTYFSTAVSKWDAEF 240

Query:   229 YIKVDDDVHVNLGKETFYLVLH 250
             Y+KVDDDVHVN+      LV H
Sbjct:   241 YVKVDDDVHVNIATLGETLVRH 262

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0006486 "protein glycosylation" evidence=IEA

GO:0008378 "galactosyltransferase activity" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS

GO:0016758 "transferase activity, transferring hexosyl groups" evidence=ISS

TAIR|locus:2116452 AT4G26940 [Arabidopsis thaliana (taxid:3702)]

 Score = 675 (242.7 bits), Expect = 2.2e-66, P = 2.2e-66
 Identities = 132/238 (55%), Positives = 172/238 (72%)

Query:    11 ASRNLIPRKWALFLCACSFCAGMSFTNRMWMMPESKGVAR--ISKTEEI--ENPEL---- 62
             AS++ + +KW LFLC   FCAG+ F++RMW  PES  V+R  ++  E +  E+ +     
Sbjct:    14 ASKSFVSKKWTLFLCIGFFCAGILFSDRMWPEPESNVVSRDTVASDERLRLESEDCDSSK 73

Query:    63 KAVKHESNNNTEKLAMVEQAIQSQDKRLDGLKTKITAVRAERDSVSLSHPVKGTSNISGS 122
             K +K ES +    +     AIQ+ DK +  L+T++   RA ++S+    PV     +  +
Sbjct:    74 KGLKRESKDILGDVYKSPDAIQTLDKTISKLETELADARAAQESIMNGSPVSDDFKLPET 133

Query:   123 MLKRKYFMVIGINTAFSSRKRRDSVRATWMPQGEKRKMLEEAKGIIIRFVIGHSATSGGI 182
             + KRKY MV+G+NTAFSSRKRRDSVRATWMP GE+RK LEE KGI++RFVIGHS+T GGI
Sbjct:   134 VTKRKYLMVVGVNTAFSSRKRRDSVRATWMPPGEERKKLEEEKGIVMRFVIGHSSTPGGI 193

Query:   183 LDKAIDAEEKMHGDFLRLEHIEGYLELSAKTKTYFATAVSMWDAEFYIKVDDDVHVNL 240
             LD+AI AEE  HGDFLRL+H+EGYLELSAKTKTYF TA +MWDA+FY+KVDDDVHVN+
Sbjct:   194 LDRAIQAEESKHGDFLRLDHVEGYLELSAKTKTYFTTAFAMWDADFYVKVDDDVHVNI 251

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0006486 "protein glycosylation" evidence=IEA

GO:0008378 "galactosyltransferase activity" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS

GO:0016758 "transferase activity, transferring hexosyl groups" evidence=ISS

TAIR|locus:2029471 AT1G77810 [Arabidopsis thaliana (taxid:3702)]

 Score = 551 (199.0 bits), Expect = 3.0e-53, P = 3.0e-53
 Identities = 125/245 (51%), Positives = 157/245 (64%)

Query:    12 SRNLIPRKWALFLCACSFCAGMSFTNRMWMMPESKGVARISKTEEIENPELKAVKHESNN 71
             S+ +I  KW  FLC   F  G  FT+R W      G   IS+     + EL+ V  +  +
Sbjct:     6 SKRVISLKWVPFLCISFFALGAIFTSRSWEPSSDSGSQLISQHHR--DHELQIVSDDCAH 63

Query:    72 NTEKLAMVEQAIQSQDKRLDGLKTKITAVRAERD---SVS-LSHPVKGTSNISGSML--K 125
             N       ++A Q +D   + L+T   A++ +R    SVS LS        + GS    +
Sbjct:    64 N-------KKATQEKDVTGEVLRTH-EAIQDDRSLDKSVSTLSSTRSSQEMVDGSETNPR 115

Query:   126 RKYFMVIGINTAFSSRKRRDSVRATWMPQGEKRKMLEEAKGIIIRFVIGHSATSGGILDK 185
             +K FMV+GINTAFSSRKRRDSVR TWMPQGEK + LE+ KGI+I+F+IGHSATS  ILD+
Sbjct:   116 KKVFMVMGINTAFSSRKRRDSVRETWMPQGEKLERLEQEKGIVIKFMIGHSATSNSILDR 175

Query:   186 AIDAEEKMHGDFLRLEHIEGYLELSAKTKTYFATAVSMWDAEFYIKVDDDVHVNLGKETF 245
             AID+E+  H DFLRLEH+EGY ELSAKTK +F+TAV+ WDAEFYIKVDDDVHVNLG    
Sbjct:   176 AIDSEDAQHKDFLRLEHVEGYHELSAKTKIFFSTAVAKWDAEFYIKVDDDVHVNLGMLAS 235

Query:   246 YLVLH 250
              L  H
Sbjct:   236 TLARH 240

GO:0005794 "Golgi apparatus" evidence=ISM;IDA

GO:0006486 "protein glycosylation" evidence=IEA

GO:0008378 "galactosyltransferase activity" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS

GO:0048531 "beta-1,3-galactosyltransferase activity" evidence=IDA

TAIR|locus:505006138 DD46 [Arabidopsis thaliana (taxid:3702)]

 Score = 509 (184.2 bits), Expect = 8.5e-49, P = 8.5e-49
 Identities = 108/240 (45%), Positives = 151/240 (62%)

Query:    20 WALFLCACSFCAGMSFTNRMWMMPESKGVARISKTEEIENPELKAV---------KHESN 70
             W   LC   F  G  FT+++       G   I   +   + ELK V         K + N
Sbjct:    15 WVPLLCISCFFLGAIFTSKLRSASSDSGSQLI--LQHRRDQELKIVTQDYAHEKKKSQDN 72

Query:    71 NNTEKLAMVEQAIQSQDKRLDGLKTKITAVRAERDSVSLSHPVKGTSNISGSMLKRKYFM 130
             +  E++    +AI+S DK +  L+ +++A  + +  V++S      S+  G+  K K FM
Sbjct:    73 DVMEEVLKTHKAIESLDKSVSMLQKQLSATHSPQQIVNVSAT---NSSTEGNQ-KNKVFM 128

Query:   131 VIGINTAFSSRKRRDSVRATWMPQGEKRKMLEEAKGIIIRFVIGHSATSGGILDKAIDAE 190
             VIGINTAFSSRKRRDS+R TWMPQGEK + LE+ KGI+++F+IGHS+T   +LDK ID+E
Sbjct:   129 VIGINTAFSSRKRRDSLRETWMPQGEKLEKLEKEKGIVVKFMIGHSSTPNSMLDKEIDSE 188

Query:   191 EKMHGDFLRLEHIEGYLELSAKTKTYFATAVSMWDAEFYIKVDDDVHVNLGKETFYLVLH 250
             +  + DF RL+H+EGY  LSAKTK++F++AV+ WDAEFY+K+DDDVHVNLG     L  H
Sbjct:   189 DAQYNDFFRLDHVEGYYNLSAKTKSFFSSAVAKWDAEFYVKIDDDVHVNLGTLASTLASH 248

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0006486 "protein glycosylation" evidence=IEA

GO:0008378 "galactosyltransferase activity" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016758 "transferase activity, transferring hexosyl groups" evidence=ISS

TAIR|locus:2038031 AT1G32930 [Arabidopsis thaliana (taxid:3702)]

 Score = 504 (182.5 bits), Expect = 2.9e-48, P = 2.9e-48
 Identities = 103/230 (44%), Positives = 143/230 (62%)

Query:    16 IPRKWALFLCACSFCAGMSFTNRMWMMPES-KGVARISKTEEIENPELKA-VKHESNNNT 73
             +  +W   LC  SF  G+   NR+    E+  G+ R S  +  ++  L   V  ES    
Sbjct:    14 VSARWVFVLCISSFLLGVLVVNRLLASFETVDGIERASPEQNDQSRSLNPLVDCESKEGD 73

Query:    74 --EKLAMVEQAIQSQDKRLDGLKTKITAVRAERDSVSLSHPVKGTSNISGSMLKRKYFMV 131
                +++     I++ DK +  L+ ++   RA R       P    +    S ++ + F V
Sbjct:    74 ILSRVSHTHDVIKTLDKTISSLEVELATARAARSDGRDGSPAVAKTVADQSKIRPRMFFV 133

Query:   132 IGINTAFSSRKRRDSVRATWMPQGEKRKMLEEAKGIIIRFVIGHSATSGGILDKAIDAEE 191
             +GI TAFSSRKRRDS+R TW+P+G++ K LE  KGII+RFVIGHS++ GG+LD  I+AEE
Sbjct:   134 MGIMTAFSSRKRRDSIRGTWLPKGDELKRLETEKGIIMRFVIGHSSSPGGVLDHTIEAEE 193

Query:   192 KMHGDFLRLEHIEGYLELSAKTKTYFATAVSMWDAEFYIKVDDDVHVNLG 241
             + H DF RL HIEGY ELS+KT+ YF++AV+ WDA+FYIKVDDDVHVNLG
Sbjct:   194 EQHKDFFRLNHIEGYHELSSKTQIYFSSAVAKWDADFYIKVDDDVHVNLG 243

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0006486 "protein glycosylation" evidence=IEA

GO:0008378 "galactosyltransferase activity" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS

GO:0016758 "transferase activity, transferring hexosyl groups" evidence=ISS

GO:0006346 "methylation-dependent chromatin silencing" evidence=RCA

GO:0031048 "chromatin silencing by small RNA" evidence=RCA

GO:0051567 "histone H3-K9 methylation" evidence=RCA

TAIR|locus:2154247 AT5G53340 [Arabidopsis thaliana (taxid:3702)]

 Score = 290 (107.1 bits), Expect = 1.4e-25, P = 1.4e-25
 Identities = 77/220 (35%), Positives = 118/220 (53%)

Query:    22 LFLCACSFCAGMSFTNRMWMMPESKGVARISKTEEIENPELKAVKHESNNNTEKLAMVEQ 81
             LF+ A +F A      R+W   +++ V  I++ + +      A+   S ++T K+     
Sbjct:    20 LFMFA-TF-ASFYVAGRLWQESQTR-VHLINELDRVTGQGKSAI---SVDDTLKII---- 69

Query:    82 AIQSQDKRLDGLKTKITAVRAERDSVSLSHPVKGTSNISGSMLKRKYFMVIGINTAFSSR 141
             A + Q K L  L+ ++++ R E   VS     K      G+  K++  +VIGI T+  ++
Sbjct:    70 ACREQKKTLAALEMELSSARQE-GFVS-----KSPKLADGTETKKRPLVVIGIMTSLGNK 123

Query:   142 KRRDSVRATWMPQGEKRKMLEEAKGIIIRFVIGHSATSGGILDKAIDAEEKMHGDFLRLE 201
             K+RD+VR  WM  G   K LE  KG+I RFVIG SA  G  +DK+ID E     DF+ L+
Sbjct:   124 KKRDAVRQAWMGTGASLKKLESEKGVIARFVIGRSANKGDSMDKSIDTENSQTDDFIILD 183

Query:   202 HI-EGYLELSAKTKTYFATAVSMWDAEFYIKVDDDVHVNL 240
              + E   E S K K +FA A   WDA+FY K  D+++VN+
Sbjct:   184 DVVEAPEEASKKVKLFFAYAADRWDAQFYAKAIDNIYVNI 223

GO:0005794 "Golgi apparatus" evidence=ISM;IDA

GO:0006486 "protein glycosylation" evidence=IEA

GO:0008378 "galactosyltransferase activity" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS

GO:0016758 "transferase activity, transferring hexosyl groups" evidence=ISS

GO:0030244 "cellulose biosynthetic process" evidence=RCA

GO:0048193 "Golgi vesicle transport" evidence=RCA

GO:0005768 "endosome" evidence=IDA

GO:0005802 "trans-Golgi network" evidence=IDA

TAIR|locus:2059531 AT2G25300 [Arabidopsis thaliana (taxid:3702)]

 Score = 282 (104.3 bits), Expect = 9.7e-25, P = 9.7e-25
 Identities = 60/122 (49%), Positives = 80/122 (65%)

Query:   120 SGSMLKRKYFMVIGINTAFSSRKRRDSVRATWMPQGEKRKMLEEAKGIIIRFVIGHSATS 179
             SGS   +K   VIG+ + F S  RR++ R ++MPQG+  + LEE +GI+IRFVIG S   
Sbjct:   111 SGSSSGKKLLAVIGVYSGFGSHLRRNTFRGSYMPQGDALRKLEE-RGIVIRFVIGRSPNR 169

Query:   180 GGILDKAIDAEEKMHGDFLRLE-HIEGYLELSAKTKTYFATAVSMWDAEFYIKVDDDVHV 238
             G  LD+ ID E +   DFL LE H E   EL+ K K +F+ AV  WDAEFYIKVDD++ +
Sbjct:   170 GDSLDRKIDEENQARKDFLILENHEEAQEELAKKVKFFFSAAVQNWDAEFYIKVDDNIDL 229

Query:   239 NL 240
             +L
Sbjct:   230 DL 231

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0006486 "protein glycosylation" evidence=IEA

GO:0008378 "galactosyltransferase activity" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS

GO:0016758 "transferase activity, transferring hexosyl groups" evidence=ISS

TAIR|locus:2116627 AT4G32120 [Arabidopsis thaliana (taxid:3702)]

 Score = 276 (102.2 bits), Expect = 4.2e-24, P = 4.2e-24
 Identities = 62/149 (41%), Positives = 86/149 (57%)

Query:    93 LKTKITAVRAERDSVSLSHPVKGTSNISGSMLKRKYFMVIGINTAFSSRKRRDSVRATWM 152
             L+ +I     E         +K   ++S S   +K   VIG+ T F S  +R+  R +WM
Sbjct:    85 LERRIVETEMELAQAKSQGYLKKQKSVSSS--GKKMLAVIGVYTGFGSHLKRNKFRGSWM 142

Query:   153 PQGEKRKMLEEAKGIIIRFVIGHSATSGGILDKAIDAEEKMHGDFLRLE-HIEGYLELSA 211
             P+ +  K LEE +G++IRFVIG SA  G  LD+ ID E +   DFL LE H E   EL  
Sbjct:   143 PRDDALKKLEE-RGVVIRFVIGRSANRGDSLDRKIDEENRATKDFLILENHEEAQEELPK 201

Query:   212 KTKTYFATAVSMWDAEFYIKVDDDVHVNL 240
             K K +++ AV  WDAEFY+KVDD+V ++L
Sbjct:   202 KVKFFYSAAVQNWDAEFYVKVDDNVDLDL 230

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0006486 "protein glycosylation" evidence=IEA

GO:0008378 "galactosyltransferase activity" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016758 "transferase activity, transferring hexosyl groups" evidence=ISS

GO:0000394 "RNA splicing, via endonucleolytic cleavage and ligation" evidence=RCA

GO:0009086 "methionine biosynthetic process" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00027312001 SubName- Full=Chromosome chr19 scaffold_4, whole genome shotgun sequence; (278 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	253
PLN03193	408	PLN03193, PLN03193, beta-1,3-galactosyltransferase	1e-113
pfam01762	196	pfam01762, Galactosyl_T, Galactosyltransferase	3e-31
pfam13334	89	pfam13334, DUF4094, Domain of unknown function (DU	1e-19

>gnl|CDD|178735 PLN03193, PLN03193, beta-1,3-galactosyltransferase; Provisional

 Score =  331 bits (850), Expect = e-113
 Identities = 151/261 (57%), Positives = 190/261 (72%), Gaps = 11/261 (4%)

Query: 1   MSFKSTGGEFASRNLIPRKWALFLCACSFCAGMSFTNRMWMMPESKGVARISKTE----- 55
           MS KS G E++SR+++ RKW L LC   FCAGM FT+RMW +PESKG++R + TE     
Sbjct: 1   MSTKSRGEEYSSRSVVSRKWTLLLCLGCFCAGMLFTDRMWTIPESKGISRTTVTEAERLK 60

Query: 56  ------EIENPELKAVKHESNNNTEKLAMVEQAIQSQDKRLDGLKTKITAVRAERDSVSL 109
                 + +    K VK +S +   +++    AIQ+ DK +  L+ ++ A RA ++S+  
Sbjct: 61  LVSEGCDPKTLYQKEVKRDSKDIIGEVSKTHNAIQTLDKTISNLEMELAAARAAQESILN 120

Query: 110 SHPVKGTSNISGSMLKRKYFMVIGINTAFSSRKRRDSVRATWMPQGEKRKMLEEAKGIII 169
             P+      + S  KR+Y MV+GINTAFSSRKRRDSVRATWMPQGEKRK LEE KGIII
Sbjct: 121 GSPISEDLKKTQSSGKRRYLMVVGINTAFSSRKRRDSVRATWMPQGEKRKKLEEEKGIII 180

Query: 170 RFVIGHSATSGGILDKAIDAEEKMHGDFLRLEHIEGYLELSAKTKTYFATAVSMWDAEFY 229
           RFVIGHSATSGGILD+AI+AE++ HGDFLRL+H+EGYLELSAKTKTYFATAV+MWDA+FY
Sbjct: 181 RFVIGHSATSGGILDRAIEAEDRKHGDFLRLDHVEGYLELSAKTKTYFATAVAMWDADFY 240

Query: 230 IKVDDDVHVNLGKETFYLVLH 250
           +KVDDDVHVN+      LV H
Sbjct: 241 VKVDDDVHVNIATLGETLVRH 261

Length = 408

>gnl|CDD|216686 pfam01762, Galactosyl_T, Galactosyltransferase

 Score =  113 bits (286), Expect = 3e-31
 Identities = 34/112 (30%), Positives = 54/112 (48%), Gaps = 6/112 (5%)

Query: 142 KRRDSVRATWMPQGEKRKMLEEAKGIIIRFVIGHSATSGGILDKAIDAEEKMHGDFLRLE 201
            RR+++R TWM +G           I   F++G SA + G +   +  E K++GD + ++
Sbjct: 1   ARRNAIRKTWMNKGNSEG-----GRIKSLFLVGLSADTDGKVKDLVMEEAKLYGDIVVVD 55

Query: 202 HIEGYLELSAKTKTYFATAVSMWD-AEFYIKVDDDVHVNLGKETFYLVLHCI 252
             + Y  L+ KT T    AVS    A++  K+DDDV+    K    L    I
Sbjct: 56  FEDTYENLTFKTLTGLLYAVSKAPSAKYIGKIDDDVYFFPDKLLSLLDRGNI 107

This family includes the galactosyltransferases UDP-galactose:2-acetamido-2-deoxy-D-glucose3beta- galactosyltransferase and UDP-Gal:beta-GlcNAc beta 1,3-galactosyltranferase. Specific galactosyltransferases transfer galactose to GlcNAc terminal chains in the synthesis of the lacto-series oligosaccharides types 1 and 2. Length = 196

>gnl|CDD|222051 pfam13334, DUF4094, Domain of unknown function (DUF4094)

 Score = 80.4 bits (199), Expect = 1e-19
 Identities = 30/89 (33%), Positives = 49/89 (55%), Gaps = 2/89 (2%)

Query: 17  PRKWALFLCACSFCAGMSFTNRMWMMPESKGVARISKTEEIENPEL--KAVKHESNNNTE 74
            RKW L LC  SF AG+  TNR+W +PES GV       ++ + +   K  + +  +   
Sbjct: 1   SRKWVLLLCFFSFFAGLLVTNRLWTLPESNGVQDAENRLQLVSEDCDRKKKESDQKDIMG 60

Query: 75  KLAMVEQAIQSQDKRLDGLKTKITAVRAE 103
           +++   +AIQS DK +  L+ ++ A R+E
Sbjct: 61  EVSDTHEAIQSLDKTISSLEMELAAARSE 89

This domain is found in plant proteins that often carry a galactosyltransferase domain, pfam01762, at their C-terminus. Length = 89

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	253
PLN03193	408	beta-1,3-galactosyltransferase; Provisional	100.0
KOG2288	274	consensus Galactosyltransferases [Carbohydrate tra	100.0
PF13334	95	DUF4094: Domain of unknown function (DUF4094)	99.97
PLN03133	636	beta-1,3-galactosyltransferase; Provisional	99.97
KOG2287	349	consensus Galactosyltransferases [Carbohydrate tra	99.96
PF01762	195	Galactosyl_T: Galactosyltransferase; InterPro: IPR	99.95
PTZ00210	382	UDP-GlcNAc-dependent glycosyltransferase; Provisio	99.89
PF02434	252	Fringe: Fringe-like; InterPro: IPR003378 The Notch	98.63
KOG2246	364	consensus Galactosyltransferases [Carbohydrate tra	98.45
PLN03153	537	hypothetical protein; Provisional	96.39
PF13641	228	Glyco_tranf_2_3: Glycosyltransferase like family 2	88.45
cd04192	229	GT_2_like_e Subfamily of Glycosyltransferase Famil	84.84
TIGR03472	373	HpnI hopanoid biosynthesis associated glycosyl tra	82.01

>PLN03193 beta-1,3-galactosyltransferase; Provisional

Probab=100.00  E-value=6e-71  Score=522.41  Aligned_cols=252  Identities=60%  Similarity=0.959  Sum_probs=228.5

Q ss_pred             CCccccCCCcccCCCcchhHHHHHHHHHHHhHHhhcccCCCCCcccchhccccc--------ccCcchhh---hhhcccc
Q 025375            1 MSFKSTGGEFASRNLIPRKWALFLCACSFCAGMSFTNRMWMMPESKGVARISKT--------EEIENPEL---KAVKHES   69 (253)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~r~w~~~~~~~~~~~~~~--------~~~~~~~~---~~~~~~~   69 (253)
                      ||.|+||+++++++.||+||+++||++|||+|++||||||..||+++..+++.+        .+||++|+   |..++++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~   80 (408)
T PLN03193          1 MSTKSRGEEYSSRSVVSRKWTLLLCLGCFCAGMLFTDRMWTIPESKGISRTTVTEAERLKLVSEGCDPKTLYQKEVKRDS   80 (408)
T ss_pred             CCcccccccccccccccHHHHHHHHHHHHHHHHhhccccccCCccccccccccchhhhhhhhccccccccccccccccch
Confidence            899999999999999999999999999999999999999999998887765432        27899876   5556799


Q ss_pred             chhhHHHHhHHHHHHHHhhhhhhhhhhhhhhhhccccccCCCCCCCCCCCCCCCCCCceeEEEEEeCCCCChHHHHHHHH
Q 025375           70 NNNTEKLAMVEQAIQSQDKRLDGLKTKITAVRAERDSVSLSHPVKGTSNISGSMLKRKYFMVIGINTAFSSRKRRDSVRA  149 (253)
Q Consensus        70 ~~~~~~v~~t~~~~~~~~k~i~~lemela~a~~~~~~~~~~~~~~~~~~~~~~~~~~k~~lvI~V~Sa~~n~~rR~aIR~  149 (253)
                      +|||+||++||+|||+|||+|++||||||+||+.|..+.++.|.+++....+...++++++||+|+|+|+|++||++||+
T Consensus        81 ~~~~~~~~~t~~~~~~~~~~~~~le~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LvIgI~Sap~~~~RR~AIR~  160 (408)
T PLN03193         81 KDIIGEVSKTHNAIQTLDKTISNLEMELAAARAAQESILNGSPISEDLKKTQSSGKRRYLMVVGINTAFSSRKRRDSVRA  160 (408)
T ss_pred             hHHHHHHhhHHHHHHHHhhhhhHHhHHHHHHHhhhhhhccCCCccccccccCCCCcceEEEEEEEeCCCCCHHHHHHHHH
Confidence            99999999999999999999999999999999977777777776544444455668889999999999999999999999


Q ss_pred             hhcCCcchhhhhhccCceEEEEEeecCCCCCcchHHHHHHHhhhCCCeEEeeccccCCChhHHHHHHHHHHhhCCCccEE
Q 025375          150 TWMPQGEKRKMLEEAKGIIIRFVIGHSATSGGILDKAIDAEEKMHGDFLRLEHIEGYLELSAKTKTYFATAVSMWDAEFY  229 (253)
Q Consensus       150 TW~~~~~~l~kL~~~~~i~v~FVvG~s~~~~~~~~~~I~~E~~~ygDIL~ld~~DsY~nLt~Ktl~~f~wa~~~~~a~F~  229 (253)
                      |||++++.+.+++.+.+|+++||||++.++++.++++|++|+++|||||++||+|+|.|||.||+++|+||..+|+|+||
T Consensus       161 TWg~~~~~~~kle~~~gv~vrFVIG~s~~~~~~ldr~Le~Ea~~ygDIL~lDfvDsY~NLT~KTl~~f~wA~~~~dAkF~  240 (408)
T PLN03193        161 TWMPQGEKRKKLEEEKGIIIRFVIGHSATSGGILDRAIEAEDRKHGDFLRLDHVEGYLELSAKTKTYFATAVAMWDADFY  240 (408)
T ss_pred             HHcCCcccccccccCCcEEEEEEeecCCCcchHHHHHHHHHHHHhCCEEEEecccccccchHHHHHHHHHHHHcCCCeEE
Confidence            99998877777777889999999999987678899999999999999999999999999999999999999999999999


Q ss_pred             EEeCCCeEEehHHHHHHHhhccC
Q 025375          230 IKVDDDVHVNLGKETFYLVLHCI  252 (253)
Q Consensus       230 lKvDDDvfVnl~~L~~~L~~~~~  252 (253)
                      +|+|||+|||+++|+.+|++++.
T Consensus       241 mK~DDDvfVnv~~L~~~L~~~~~  263 (408)
T PLN03193        241 VKVDDDVHVNIATLGETLVRHRK  263 (408)
T ss_pred             EEcCCCceEcHHHHHHHHHhcCC
Confidence            99999999999999999987753

>KOG2288 consensus Galactosyltransferases [Carbohydrate transport and metabolism]

Probab=100.00  E-value=2.5e-35  Score=264.05  Aligned_cols=127  Identities=63%  Similarity=0.954  Sum_probs=123.1

Q ss_pred             CCceeEEEEEeCCCCChHHHHHHHHhhcCCcchhhhhhccCceEEEEEeecCCCCCcchHHHHHHHhhhCCCeEEee-cc
Q 025375          125 KRKYFMVIGINTAFSSRKRRDSVRATWMPQGEKRKMLEEAKGIIIRFVIGHSATSGGILDKAIDAEEKMHGDFLRLE-HI  203 (253)
Q Consensus       125 ~~k~~lvI~V~Sa~~n~~rR~aIR~TW~~~~~~l~kL~~~~~i~v~FVvG~s~~~~~~~~~~I~~E~~~ygDIL~ld-~~  203 (253)
                      ++++++||+|+|+|++.+||+++|+||||+++.+++++++++|.++|+||+ ++.+++.+++|++|+++|+|+|++| |+
T Consensus         8 ~~k~l~vigI~T~f~s~~RR~~vR~TWmp~~~~l~rle~e~gv~~RFvIG~-~~~g~~~~r~ie~E~~~~~DfllLd~h~   86 (274)
T KOG2288|consen    8 RRKVLLVIGINTAFSSRKRRDSVRQTWMPSGEGLKRLEEEKGVIIRFVIGT-ATLGASLDRALEEENAQHGDFLLLDRHE   86 (274)
T ss_pred             ccceEEEEEeecccchhhhHHHHHHhhcCCccchhhhccccceEEEEEecc-CCccHHHHHHHHHHHHhcCCeEeechhH
Confidence            788999999999999999999999999999999999999999999999999 4468999999999999999999999 99


Q ss_pred             ccCCChhHHHHHHHHHHhhCCCccEEEEeCCCeEEehHHHHHHHhhccC
Q 025375          204 EGYLELSAKTKTYFATAVSMWDAEFYIKVDDDVHVNLGKETFYLVLHCI  252 (253)
Q Consensus       204 DsY~nLt~Ktl~~f~wa~~~~~a~F~lKvDDDvfVnl~~L~~~L~~~~~  252 (253)
                      |+|++||.||+.+|.||..+|+++||+|+|||+|||++.|...|++|++
T Consensus        87 E~Y~~Ls~Kt~~~f~~A~~~~daeFyvKvDDDv~v~l~~L~~~la~~r~  135 (274)
T KOG2288|consen   87 EAYEELSAKTKAFFSAAVAHWDAEFYVKVDDDVYVRLARLGTLLARERS  135 (274)
T ss_pred             HHHHHHHHHHHHHHHHHHHhccceEEEEccccceecHHHHHHHHHhhcc
Confidence            9999999999999999999999999999999999999999999999986

>PF13334 DUF4094: Domain of unknown function (DUF4094)

Probab=99.97  E-value=5.7e-32  Score=211.72  Aligned_cols=85  Identities=42%  Similarity=0.735  Sum_probs=74.8

Q ss_pred             chhHHHHHHHHHHHhHHhhcccCCCCCcccchhcccc-----c----ccCcchhhhhhccccchhhHHHHhHHHHHHHHh
Q 025375           17 PRKWALFLCACSFCAGMSFTNRMWMMPESKGVARISK-----T----EEIENPELKAVKHESNNNTEKLAMVEQAIQSQD   87 (253)
Q Consensus        17 ~~~~~~~l~~~~~~~~~~~~~r~w~~~~~~~~~~~~~-----~----~~~~~~~~~~~~~~~~~~~~~v~~t~~~~~~~~   87 (253)
                      |+||+++||+||||+|+|||||||..||+++......     +    .+||++|+ ..+.+++++|+||+|||+|||+||
T Consensus         1 S~kw~l~Lc~~SF~~G~lft~R~W~~pe~~~~~~~~~~~~~~~l~l~s~~c~~k~-~~~~~~~di~~eV~kTh~aIq~Ld   79 (95)
T PF13334_consen    1 SRKWVLLLCIASFCAGMLFTNRMWTVPESKEISRRSSQDAEERLQLVSEDCDPKK-LKESDQRDIMGEVSKTHEAIQSLD   79 (95)
T ss_pred             CchHHHHHHHHHHHHHHHHhcccccCCccccchhhhccccccccccccccccccc-cccCCccchhHHHHHHHHHHHHHH
Confidence            6899999999999999999999999999888774321     1    27999865 235689999999999999999999


Q ss_pred             hhhhhhhhhhhhhhh
Q 025375           88 KRLDGLKTKITAVRA  102 (253)
Q Consensus        88 k~i~~lemela~a~~  102 (253)
                      |+||+|||||||||+
T Consensus        80 KtIS~LEMELAaARa   94 (95)
T PF13334_consen   80 KTISSLEMELAAARA   94 (95)
T ss_pred             HHHHHHHHHHHHHhc
Confidence            999999999999998

>PLN03133 beta-1,3-galactosyltransferase; Provisional

Probab=99.97  E-value=2e-30  Score=258.07  Aligned_cols=120  Identities=23%  Similarity=0.339  Sum_probs=109.3

Q ss_pred             CCCceeEEEEEeCCCCChHHHHHHHHhhcCCcchhhhhhccCceEEEEEeecCCCCCcchHHHHHHHhhhCCCeEEeecc
Q 025375          124 LKRKYFMVIGINTAFSSRKRRDSVRATWMPQGEKRKMLEEAKGIIIRFVIGHSATSGGILDKAIDAEEKMHGDFLRLEHI  203 (253)
Q Consensus       124 ~~~k~~lvI~V~Sa~~n~~rR~aIR~TW~~~~~~l~kL~~~~~i~v~FVvG~s~~~~~~~~~~I~~E~~~ygDIL~ld~~  203 (253)
                      ++++++|+|+|+|+|+|++||++||+|||+...     .....+.++|+||.+.  ++.++..|++|+++|||||++||.
T Consensus       381 ~~~~~~LlI~V~Sap~nf~rR~AIR~TWg~~~~-----~~~~~v~~rFvVG~s~--n~~l~~~L~~Ea~~ygDIIq~dF~  453 (636)
T PLN03133        381 PKKPLDLFIGVFSTANNFKRRMAVRRTWMQYDA-----VRSGAVAVRFFVGLHK--NQMVNEELWNEARTYGDIQLMPFV  453 (636)
T ss_pred             CCCceEEEEEEeCCcccHHHHHHHHHhhccccc-----cCCCceEEEEEEecCC--cHHHHHHHHHHHHHcCCeEEEeee
Confidence            356799999999999999999999999998531     1245699999999986  467899999999999999999999


Q ss_pred             ccCCChhHHHHHHHHHHhhCCCccEEEEeCCCeEEehHHHHHHHhhc
Q 025375          204 EGYLELSAKTKTYFATAVSMWDAEFYIKVDDDVHVNLGKETFYLVLH  250 (253)
Q Consensus       204 DsY~nLt~Ktl~~f~wa~~~~~a~F~lKvDDDvfVnl~~L~~~L~~~  250 (253)
                      |+|+|||+||++++.|+..|++++||+|+|||+|||+++|+.+|..+
T Consensus       454 DsY~NLTlKtl~~~~wa~~c~~akFilK~DDDvFVnv~~Ll~~L~~~  500 (636)
T PLN03133        454 DYYSLITWKTLAICIFGTEVVSAKYVMKTDDDAFVRVDEVLASLKRT  500 (636)
T ss_pred             chhhhhHHHHHHHHHHHHhCCCceEEEEcCCceEEcHHHHHHHHHhc
Confidence            99999999999999999999999999999999999999999999754

>KOG2287 consensus Galactosyltransferases [Carbohydrate transport and metabolism]

Probab=99.96  E-value=3.6e-29  Score=235.05  Aligned_cols=118  Identities=26%  Similarity=0.410  Sum_probs=108.8

Q ss_pred             ceeEEEEEeCCCCChHHHHHHHHhhcCCcchhhhhhccCceEEEEEeecCCCCCcchHHHHHHHhhhCCCeEEeeccccC
Q 025375          127 KYFMVIGINTAFSSRKRRDSVRATWMPQGEKRKMLEEAKGIIIRFVIGHSATSGGILDKAIDAEEKMHGDFLRLEHIEGY  206 (253)
Q Consensus       127 k~~lvI~V~Sa~~n~~rR~aIR~TW~~~~~~l~kL~~~~~i~v~FVvG~s~~~~~~~~~~I~~E~~~ygDIL~ld~~DsY  206 (253)
                      .++++++|.|++++++||++||+|||+...     ..+..++++|++|.+++.+ .+++.+.+|++.|||||+.||.|+|
T Consensus        94 ~~~lLl~V~S~~~~farR~aiR~TW~~~~~-----v~~~~v~~~FLvG~~~~~~-~~~~~l~~Ea~~ygDIi~~df~Dty  167 (349)
T KOG2287|consen   94 PPELLLLVKSAPDNFARRNAIRKTWGNENN-----VRGGRVRVLFLVGLPSNED-KLNKLLADEARLYGDIIQVDFEDTY  167 (349)
T ss_pred             CceEEEEEecCCCCHHHHHHHHHHhcCccc-----cCCCcEEEEEEecCCCcHH-HHHHHHHHHHHHhCCEEEEecccch
Confidence            489999999999999999999999999752     3467799999999998543 6689999999999999999999999


Q ss_pred             CChhHHHHHHHHHHhh-CCCccEEEEeCCCeEEehHHHHHHHhhc
Q 025375          207 LELSAKTKTYFATAVS-MWDAEFYIKVDDDVHVNLGKETFYLVLH  250 (253)
Q Consensus       207 ~nLt~Ktl~~f~wa~~-~~~a~F~lKvDDDvfVnl~~L~~~L~~~  250 (253)
                      .|||+|+++++.|+.. |++++|++|+|||||||+++|+.+|..+
T Consensus       168 ~nltlKtl~~l~w~~~~cp~akfi~K~DDDvfv~~~~L~~~L~~~  212 (349)
T KOG2287|consen  168 FNLTLKTLAILLWGVSKCPDAKFILKIDDDVFVNPDNLLEYLDKL  212 (349)
T ss_pred             hchHHHHHHHHHHHHhcCCcceEEEeccCceEEcHHHHHHHHhcc
Confidence            9999999999999875 8899999999999999999999999987

>PF01762 Galactosyl_T: Galactosyltransferase; InterPro: IPR002659 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases

Probab=99.95  E-value=2.2e-28  Score=210.31  Aligned_cols=104  Identities=31%  Similarity=0.440  Sum_probs=94.1

Q ss_pred             HHHHHHHHhhcCCcchhhhhhccCceEEEEEeecCCCCCcchHHHHHHHhhhCCCeEEeeccccCCChhHHHHHHHHHHh
Q 025375          142 KRRDSVRATWMPQGEKRKMLEEAKGIIIRFVIGHSATSGGILDKAIDAEEKMHGDFLRLEHIEGYLELSAKTKTYFATAV  221 (253)
Q Consensus       142 ~rR~aIR~TW~~~~~~l~kL~~~~~i~v~FVvG~s~~~~~~~~~~I~~E~~~ygDIL~ld~~DsY~nLt~Ktl~~f~wa~  221 (253)
                      +||++||+||++...     ....++.++||+|.+++.+..++..|.+|+++|||||++||.|+|+|||+||+++|+|+.
T Consensus         1 ~rR~~IR~TW~~~~~-----~~~~~~~~~FvvG~~~~~~~~~~~~l~~E~~~y~Dil~~d~~D~y~nlt~K~~~~~~w~~   75 (195)
T PF01762_consen    1 ERRQAIRETWGNQRN-----FKGVRVKVVFVVGESPNSDSDLQEALQEEAEKYGDILQGDFVDSYRNLTLKTLAGLKWAS   75 (195)
T ss_pred             ChHHHHHHHHhcccc-----cCCCcEEEEEEEecCCCCcHHHHHHhhhhhhhcCceEeeecccccchhhHHHHHHHHHHH
Confidence            589999999999752     235789999999999865678889999999999999999999999999999999999997


Q ss_pred             hC-CCccEEEEeCCCeEEehHHHHHHHhhc
Q 025375          222 SM-WDAEFYIKVDDDVHVNLGKETFYLVLH  250 (253)
Q Consensus       222 ~~-~~a~F~lKvDDDvfVnl~~L~~~L~~~  250 (253)
                      ++ ++++||+|+|||+|||+++|.++|.++
T Consensus        76 ~~c~~~~~v~k~DDD~~vn~~~l~~~L~~~  105 (195)
T PF01762_consen   76 KHCPNAKYVLKVDDDVFVNPDRLVSFLKSL  105 (195)
T ss_pred             hhCCchhheeecCcEEEEehHHhhhhhhhc
Confidence            64 459999999999999999999999876

These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 31 (GH31 from CAZY) comprises enzymes with a number of known activities; N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase (2.4.1.149 from EC); beta-1,3-galactosyltransferase (2.4.1 from EC); fucose-specific beta-1,3-N-acetylglucosaminyltransferase (2.4.1 from EC); globotriosylceramide beta-1,3-GalNAc transferase (2.4.1.79 from EC) [, ].; GO: 0008378 galactosyltransferase activity, 0006486 protein glycosylation, 0016020 membrane

>PTZ00210 UDP-GlcNAc-dependent glycosyltransferase; Provisional

Probab=99.89  E-value=5.2e-23  Score=193.86  Aligned_cols=128  Identities=19%  Similarity=0.282  Sum_probs=110.8

Q ss_pred             CCCCceeEEEEEeCCCCC--hHHHHHHHHhhcCCcchh-hhhhccCceEEEEEeecCCCCCcchHHHHHHHhhhCCCeEE
Q 025375          123 MLKRKYFMVIGINTAFSS--RKRRDSVRATWMPQGEKR-KMLEEAKGIIIRFVIGHSATSGGILDKAIDAEEKMHGDFLR  199 (253)
Q Consensus       123 ~~~~k~~lvI~V~Sa~~n--~~rR~aIR~TW~~~~~~l-~kL~~~~~i~v~FVvG~s~~~~~~~~~~I~~E~~~ygDIL~  199 (253)
                      ...++.++++||.|..++  +.||++.|+||+...... +...-...+.++|++|.+++.+-+.+.++.+|+++|||||+
T Consensus        75 w~~~~~lv~~Gi~S~d~~~r~~rR~lqr~t~w~y~~va~~~n~ftg~~lv~y~l~~H~~~~~~~~~~L~eEA~~~~DIVi  154 (382)
T PTZ00210         75 WKAQRFLAVLGIPSVDNSERSRRRDLQRQTCWKYSGVATRSNNFSGSLLPLYLLAPHQSNSYLISHSLKEEAARTHDIIT  154 (382)
T ss_pred             hccCCceEEEeccCCCchHHHHHHHHHHhhhhcchhhhhhccCCchhhhhhhhhccCCccchhhhHHHHHHHHHhCCEEE
Confidence            447789999999999998  999999999999875432 22212345888999999998778999999999999999999


Q ss_pred             eec------------------cccCCChhHHHHHHHHHHhh-CCCccEEEEeCCCeEEehHHHHHHHhhc
Q 025375          200 LEH------------------IEGYLELSAKTKTYFATAVS-MWDAEFYIKVDDDVHVNLGKETFYLVLH  250 (253)
Q Consensus       200 ld~------------------~DsY~nLt~Ktl~~f~wa~~-~~~a~F~lKvDDDvfVnl~~L~~~L~~~  250 (253)
                      +||                  .|+|.++|.||+++|+||.. |++++|++|+|||+|||+|.++++|+..
T Consensus       155 lpf~d~~~tTnKkiG~~g~WG~e~e~~mT~KT~l~~~wA~~~cP~a~YImKgDDDvFVrVp~lL~~Lr~~  224 (382)
T PTZ00210        155 LPTNDVSPSTRKKIGENGNWGIEAEVAMSRKTYLWLRFALHMFPNVSYIVKGDDDIFIRVPKYLADLRVM  224 (382)
T ss_pred             EecccCccccccccccCCcccchhhcchhHHHHHHHHHHHHhCCCCCeEEEcCCCeEeeHHHHHHHHhhC
Confidence            999                  67778899999999999975 6699999999999999999999999643

>PF02434 Fringe: Fringe-like; InterPro: IPR003378 The Notch receptor is a large, cell surface transmembrane protein involved in a wide variety of developmental processes in higher organisms []

Probab=98.63  E-value=5.4e-08  Score=88.00  Aligned_cols=106  Identities=16%  Similarity=0.124  Sum_probs=56.4

Q ss_pred             eeEEEEEeCCCCChHHH-HHHHHhhcCCcchhhhhhccCceEEEEEeecCCCCCcchHHHHHHHhhhCCCeEEeeccccC
Q 025375          128 YFMVIGINTAFSSRKRR-DSVRATWMPQGEKRKMLEEAKGIIIRFVIGHSATSGGILDKAIDAEEKMHGDFLRLEHIEGY  206 (253)
Q Consensus       128 ~~lvI~V~Sa~~n~~rR-~aIR~TW~~~~~~l~kL~~~~~i~v~FVvG~s~~~~~~~~~~I~~E~~~ygDIL~ld~~DsY  206 (253)
                      -.++|+|+|++.+.+.| .+|++||++.-         ....++|.-  .      .+..+..+  .-.+++.-+...++
T Consensus         6 ~dI~i~V~T~~k~h~tR~~~I~~TW~~~~---------~~~~~ifsd--~------~d~~l~~~--~~~~l~~~~~~~~~   66 (252)
T PF02434_consen    6 DDIFIAVKTTKKFHKTRAPAIKQTWAKRC---------NKQTFIFSD--A------EDPSLPTV--TGVHLVNPNCDAGH   66 (252)
T ss_dssp             GGEEEEEE--GGGTTTTHHHHHHTGGGGS---------GGGEEEEES--S--------HHHHHH--HGGGEEE-------
T ss_pred             ccEEEEEEeCHHHHHHHHHHHHHHHHhhc---------CCceEEecC--c------cccccccc--cccccccCCCcchh
Confidence            46889999999876655 89999999853         122222321  1      12333333  22345444455444


Q ss_pred             CChhHHHHHHHHHHh-hCCCccEEEEeCCCeEEehHHHHHHHhhccC
Q 025375          207 LELSAKTKTYFATAV-SMWDAEFYIKVDDDVHVNLGKETFYLVLHCI  252 (253)
Q Consensus       207 ~nLt~Ktl~~f~wa~-~~~~a~F~lKvDDDvfVnl~~L~~~L~~~~~  252 (253)
                      ....++.++.+.+.. ...+++|++++|||+||++++|..+|..+.+
T Consensus        67 ~~~~~~~~~~~~y~~~~~~~~~Wf~~~DDDtyv~~~~L~~~L~~~~~  113 (252)
T PF02434_consen   67 CRKTLSCKMAYEYDHFLNSDKDWFCFADDDTYVNVENLRRLLSKYDP  113 (252)
T ss_dssp             ------HHHHHHHHHHHHHT-SEEEEEETTEEE-HHHHHHHHTTS-T
T ss_pred             hHHHHHHHHHHHHHhhhcCCceEEEEEeCCceecHHHHHHHHhhCCC
Confidence            444444444444422 2357899999999999999999999998654

It becomes activated when its extracellular region binds to ligands located on adjacent cells. Much of this extracellular region is composed of EGF-like repeats, many of which can be O-fucosylated. A number of these O-fucosylated repeats can in turn be further modified by the action of a beta-1,3-N-acetylglucosaminyltransferase enzyme known as Fringe []. Fringe potentiates the activation of Notch by Delta ligands, while inhibiting activation by Serrate/Jagged ligands. This regulation of Notch signalling by Fringe is important in many processes []. Four distinct Fringe proteins have so far been studied in detail; Drosophila Fringe (Dfng) and its three mammalian homologues Lunatic Fringe (Lfng), Radical Fringe (Rfng) and Manic Fringe (Mfng). Dfng, Lfng and Rfng have all been shown to play important roles in developmental processes within their host, though the phenotype of mutants can vary between species e.g. Rfng mutants are retarded in wing development in chickens, but have no obvious phenotype in mice [, , ]. Mfng mutants have not, so far, been charcterised. Biochemical studies indicate that the Fringe proteins are fucose-specific transferases requiring manganese for activity and utilising UDP-N-acetylglucosamine as a donor substrate []. The three mammalian proteins show distinct variations in their catalytic efficiencies with different substrates. Dfng is a glucosaminyltransferase that controls the response of the Notch receptor to specific ligands which is localised to the Golgi apparatus [] (not secreted as previously thought). Modification of Notch occurs through glycosylation by Dfng. This entry consists of Fringe proteins and related glycosyltransferase enzymes including: Beta-1,3-glucosyltransferase, which glucosylates O-linked fucosylglycan on thrombospondin type 1 repeat domains []. Core 1 beta1,3-galactosyltransferase 1, generates the core T antigen, which is a precursor for many extended O-glycans in glycoproteins and plays a central role in many processes, such as angiogenesis, thrombopoiesis and kidney homeostasis development []. ; GO: 0016757 transferase activity, transferring glycosyl groups, 0016020 membrane; PDB: 2J0B_A 2J0A_A.

>KOG2246 consensus Galactosyltransferases [Carbohydrate transport and metabolism]

Probab=98.45  E-value=4.3e-07  Score=86.57  Aligned_cols=102  Identities=20%  Similarity=0.231  Sum_probs=79.7

Q ss_pred             CCceeEEEEEeCCCCChHHH-HHHHHhhcCCcchhhhhhccCceEEEEEe---ecCCCCCcchHHHHHHHhhhCCCeEEe
Q 025375          125 KRKYFMVIGINTAFSSRKRR-DSVRATWMPQGEKRKMLEEAKGIIIRFVI---GHSATSGGILDKAIDAEEKMHGDFLRL  200 (253)
Q Consensus       125 ~~k~~lvI~V~Sa~~n~~rR-~aIR~TW~~~~~~l~kL~~~~~i~v~FVv---G~s~~~~~~~~~~I~~E~~~ygDIL~l  200 (253)
                      .++..+++.|.|++.+..-| +.+-+||++.-+           +..|+-   ....              ..+ ..|..
T Consensus        88 ~r~~~v~cwv~t~~~~~~~~~~~v~~TW~~rc~-----------~~~f~s~~~s~~~--------------~~f-~~v~~  141 (364)
T KOG2246|consen   88 SRSGRVLCWVLTSPMRHVTRADAVKETWLKRCD-----------KGIFFSPTLSKDD--------------SRF-PTVYY  141 (364)
T ss_pred             CCCceEEEEEEecCcCceeehhhhhcccccccC-----------cceecCccCCCCC--------------CcC-ceeec
Confidence            66789999999999888766 699999997421           223332   2221              112 24478


Q ss_pred             eccccCCChhHHHHHHHHHHhh--CCCccEEEEeCCCeEEehHHHHHHHhhccC
Q 025375          201 EHIEGYLELSAKTKTYFATAVS--MWDAEFYIKVDDDVHVNLGKETFYLVLHCI  252 (253)
Q Consensus       201 d~~DsY~nLt~Ktl~~f~wa~~--~~~a~F~lKvDDDvfVnl~~L~~~L~~~~~  252 (253)
                      +..|+|+++..||..+|++...  -.+++|++|.|||+|+.++||..+|..+.+
T Consensus       142 ~~~~g~~~~~~ktr~~~~yv~~~~~~~~dWf~~aDDDTy~i~eNLr~~L~~yDp  195 (364)
T KOG2246|consen  142 NLPDGYRSLWRKTRIAFKYVYDHILKDYDWFLKADDDTYFIMENLRYVLSKYDP  195 (364)
T ss_pred             cCCcchHHHHHHHHHHHHHHHHhccCCCCeEEeccCCeEEeHHHHHHHHhhcCC
Confidence            8999999999999999999863  358999999999999999999999998764

>PLN03153 hypothetical protein; Provisional

Probab=96.39  E-value=0.021  Score=57.01  Aligned_cols=29  Identities=21%  Similarity=0.165  Sum_probs=27.0

Q ss_pred             CCCccEEEEeCCCeEEehHHHHHHHhhcc
Q 025375          223 MWDAEFYIKVDDDVHVNLGKETFYLVLHC  251 (253)
Q Consensus       223 ~~~a~F~lKvDDDvfVnl~~L~~~L~~~~  251 (253)
                      .++++||+++|||+|+.+++|+..|..+.
T Consensus       208 ~pd~kWfVf~DDDTyf~~~NLv~~Ls~YD  236 (537)
T PLN03153        208 LPDVRWFVLGDDDTIFNADNLVAVLSKYD  236 (537)
T ss_pred             CCCCCEEEEecCCccccHHHHHHHHhhcC
Confidence            57999999999999999999999998865

>PF13641 Glyco_tranf_2_3: Glycosyltransferase like family 2; PDB: 4FIY_B 4FIX_A

Probab=88.45  E-value=2.8  Score=35.42  Aligned_cols=104  Identities=11%  Similarity=0.034  Sum_probs=49.3

Q ss_pred             EEEEEeCCCCChHHHHHHHHhhcCCcchhhhhhccCceEEEEEeecCCCCCcchHHHHHHHhhhCCCe--EEeeccccCC
Q 025375          130 MVIGINTAFSSRKRRDSVRATWMPQGEKRKMLEEAKGIIIRFVIGHSATSGGILDKAIDAEEKMHGDF--LRLEHIEGYL  207 (253)
Q Consensus       130 lvI~V~Sa~~n~~rR~aIR~TW~~~~~~l~kL~~~~~i~v~FVvG~s~~~~~~~~~~I~~E~~~ygDI--L~ld~~DsY~  207 (253)
                      +.|+|.+......-++.++.--..        . ...+.++++...+.   +.....+++-...|...  -.+...   .
T Consensus         3 v~Vvip~~~~~~~l~~~l~sl~~~--------~-~~~~~v~vvd~~~~---~~~~~~~~~~~~~~~~~~v~vi~~~---~   67 (228)
T PF13641_consen    3 VSVVIPAYNEDDVLRRCLESLLAQ--------D-YPRLEVVVVDDGSD---DETAEILRALAARYPRVRVRVIRRP---R   67 (228)
T ss_dssp             EEEE--BSS-HHHHHHHHHHHTTS--------H-HHTEEEEEEEE-SS---S-GCTTHHHHHHTTGG-GEEEEE------
T ss_pred             EEEEEEecCCHHHHHHHHHHHHcC--------C-CCCeEEEEEECCCC---hHHHHHHHHHHHHcCCCceEEeecC---C
Confidence            445555544434444555444422        1 12366666664443   23334455555566542  223222   2


Q ss_pred             Chh--HHHHHHHHHHhhCCCccEEEEeCCCeEEehHHHHHHHhh
Q 025375          208 ELS--AKTKTYFATAVSMWDAEFYIKVDDDVHVNLGKETFYLVL  249 (253)
Q Consensus       208 nLt--~Ktl~~f~wa~~~~~a~F~lKvDDDvfVnl~~L~~~L~~  249 (253)
                      |..  .|.- .+.++....+.+|++.+|||+.+.++.|..++..
T Consensus        68 ~~g~~~k~~-a~n~~~~~~~~d~i~~lD~D~~~~p~~l~~~~~~  110 (228)
T PF13641_consen   68 NPGPGGKAR-ALNEALAAARGDYILFLDDDTVLDPDWLERLLAA  110 (228)
T ss_dssp             -HHHHHHHH-HHHHHHHH---SEEEEE-SSEEE-CHHHHHHHHH
T ss_pred             CCCcchHHH-HHHHHHHhcCCCEEEEECCCcEECHHHHHHHHHH
Confidence            332  2333 3455555557999999999999999888877664

>cd04192 GT_2_like_e Subfamily of Glycosyltransferase Family GT2 of unknown function

Probab=84.84  E-value=18  Score=30.10  Aligned_cols=77  Identities=16%  Similarity=0.109  Sum_probs=44.9

Q ss_pred             eEEEEEeecCCCCCcchHHHHH-HHhhhCCCeEEeeccccCCChhHHHHHHHHHHhhCCCccEEEEeCCCeEEehHHHHH
Q 025375          167 IIIRFVIGHSATSGGILDKAID-AEEKMHGDFLRLEHIEGYLELSAKTKTYFATAVSMWDAEFYIKVDDDVHVNLGKETF  245 (253)
Q Consensus       167 i~v~FVvG~s~~~~~~~~~~I~-~E~~~ygDIL~ld~~DsY~nLt~Ktl~~f~wa~~~~~a~F~lKvDDDvfVnl~~L~~  245 (253)
                      +.++.|-..+.   +.....+. .....+..+..++..+. .+. .|. .++.++......+|++.+|+|..+.++.|..
T Consensus        29 ~eiivvdd~s~---d~t~~~~~~~~~~~~~~v~~~~~~~~-~~~-g~~-~a~n~g~~~~~~d~i~~~D~D~~~~~~~l~~  102 (229)
T cd04192          29 FEVILVDDHST---DGTVQILEFAAAKPNFQLKILNNSRV-SIS-GKK-NALTTAIKAAKGDWIVTTDADCVVPSNWLLT  102 (229)
T ss_pred             eEEEEEcCCCC---cChHHHHHHHHhCCCcceEEeeccCc-ccc-hhH-HHHHHHHHHhcCCEEEEECCCcccCHHHHHH
Confidence            66666665543   22333444 22222334555655442 222 222 2345555556789999999999999888877


Q ss_pred             HHhh
Q 025375          246 YLVL  249 (253)
Q Consensus       246 ~L~~  249 (253)
                      ++..
T Consensus       103 l~~~  106 (229)
T cd04192         103 FVAF  106 (229)
T ss_pred             HHHH
Confidence            7763

GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.

>TIGR03472 HpnI hopanoid biosynthesis associated glycosyl transferase protein HpnI

Probab=82.01  E-value=39  Score=31.78  Aligned_cols=107  Identities=7%  Similarity=-0.024  Sum_probs=57.3

Q ss_pred             eEEEEEeCCCCChHHHHHHHHhhcCCcchhhhhhccCceEEEEEeecCCCCCcchHHHHHHHhhhCCC--eEEeeccccC
Q 025375          129 FMVIGINTAFSSRKRRDSVRATWMPQGEKRKMLEEAKGIIIRFVIGHSATSGGILDKAIDAEEKMHGD--FLRLEHIEGY  206 (253)
Q Consensus       129 ~lvI~V~Sa~~n~~rR~aIR~TW~~~~~~l~kL~~~~~i~v~FVvG~s~~~~~~~~~~I~~E~~~ygD--IL~ld~~DsY  206 (253)
                      .+-|+|.+.-....-.+.++ +...+.        -..+.++|+...+.   +.....+++=.+.|.+  +..+.-.+ -
T Consensus        42 ~VSViiP~~nee~~l~~~L~-Sl~~q~--------Yp~~EIivvdd~s~---D~t~~iv~~~~~~~p~~~i~~v~~~~-~  108 (373)
T TIGR03472        42 PVSVLKPLHGDEPELYENLA-SFCRQD--------YPGFQMLFGVQDPD---DPALAVVRRLRADFPDADIDLVIDAR-R  108 (373)
T ss_pred             CeEEEEECCCCChhHHHHHH-HHHhcC--------CCCeEEEEEeCCCC---CcHHHHHHHHHHhCCCCceEEEECCC-C
Confidence            35555555444333444553 333321        12477777766553   2222333333455666  32232111 1


Q ss_pred             CChhHHHHHHHHHHhhCCCccEEEEeCCCeEEehHHHHHHHhh
Q 025375          207 LELSAKTKTYFATAVSMWDAEFYIKVDDDVHVNLGKETFYLVL  249 (253)
Q Consensus       207 ~nLt~Ktl~~f~wa~~~~~a~F~lKvDDDvfVnl~~L~~~L~~  249 (253)
                      .....|.-.... +....+.+|++.+|+|+.+.++.|...+..
T Consensus       109 ~G~~~K~~~l~~-~~~~a~ge~i~~~DaD~~~~p~~L~~lv~~  150 (373)
T TIGR03472       109 HGPNRKVSNLIN-MLPHARHDILVIADSDISVGPDYLRQVVAP  150 (373)
T ss_pred             CCCChHHHHHHH-HHHhccCCEEEEECCCCCcChhHHHHHHHH
Confidence            223356544333 344457899999999999999888776654

This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The member of this clade from Acidithiobacillus ferrooxidans ATCC 23270 (AFE_0974) is found in the same locus as squalene-hopene cyclase (SHC, TIGR01507) and other genes associated with the biosynthesis of hopanoid natural products. Similarly, in Ralstonia eutropha JMP134 (Reut_B4902) this gene is adjacent to HpnAB, IspH and HpnH (TIGR03470), although SHC itself is elsewhere in the genome. Notably, this gene (here named HpnI) and three others form a conserved set (HpnIJKL) which occur in a subset of all genomes containing the SHC enzyme. This relationship was discerned using the method of partial phylogenetic profiling. This group includes Zymomonas mobilis, the organism where the initial hopano

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	253
2j0a_A	280	Beta-1,3-N-acetylglucosaminyltransferase manic FR;	99.28
3bcv_A	240	Putative glycosyltransferase protein; protein stru	81.93

>2j0a_A Beta-1,3-N-acetylglucosaminyltransferase manic FR; glycosyltransferase, developmental protein, transmembrane, G apparatus, notch signaling; 1.8A {Mus musculus} PDB: 2j0b_A*

Probab=99.28  E-value=7.8e-12  Score=112.91  Aligned_cols=106  Identities=19%  Similarity=0.214  Sum_probs=73.4

Q ss_pred             CceeEEEEEeCCCCC-hHHHHHHHHhhcCCcchhhhhhccCceEEEEEeecCCCCCcchHHHHHHHhhhCCCeEEeecc-
Q 025375          126 RKYFMVIGINTAFSS-RKRRDSVRATWMPQGEKRKMLEEAKGIIIRFVIGHSATSGGILDKAIDAEEKMHGDFLRLEHI-  203 (253)
Q Consensus       126 ~k~~lvI~V~Sa~~n-~~rR~aIR~TW~~~~~~l~kL~~~~~i~v~FVvG~s~~~~~~~~~~I~~E~~~ygDIL~ld~~-  203 (253)
                      ..-.|+|+|+|++.+ ..|+.+||+||++...         ..  .||.+...  +.    .+...  ..++++..++. 
T Consensus        11 ~~~~I~~~V~T~~~~~~~R~~~I~~TW~~~~~---------~~--~fifsd~~--d~----~l~~~--~~~~~~~~~~~~   71 (280)
T 2j0a_A           11 QLGDIFIAVKTTWAFHRSRLDLLLDTWVSRIR---------QQ--TFIFTDSP--DE----RLQER--LGPHLVVTQCSA   71 (280)
T ss_dssp             CGGGEEEEEECCGGGTTTTHHHHHHTGGGGSG---------GG--EEEEESSC--CH----HHHHH--HGGGEEECCC--
T ss_pred             CcccEEEEEECcHHHHHHHHHHHHHHHhccCC---------Cc--eEEEcCCC--cc----ccccc--ccccceeccccc
Confidence            446788999999984 5688999999997421         11  23333322  11    22222  34578887764 


Q ss_pred             -ccCCChhHHHHHHHHHHhhCCCccEEEEeCCCeEEehHHHHHHHhhcc
Q 025375          204 -EGYLELSAKTKTYFATAVSMWDAEFYIKVDDDVHVNLGKETFYLVLHC  251 (253)
Q Consensus       204 -DsY~nLt~Ktl~~f~wa~~~~~a~F~lKvDDDvfVnl~~L~~~L~~~~  251 (253)
                       +++.+++.|+...+.+.. +.+++|++|+|||+|||+++|..+|..+.
T Consensus        72 ~~~~~~l~~K~~~~~~~~l-~~~~~Wf~~~DDDtyv~~~nL~~~L~~~d  119 (280)
T 2j0a_A           72 EHSHPALSCKMAAEFDAFL-VSGLRWFCHVDDDNYVNPKALLQLLKTFP  119 (280)
T ss_dssp             -----CCCHHHHHHHHHHH-HHTCSEEEEEETTEEECHHHHHHHHTTSC
T ss_pred             cccccchHHHHHHHHHHHh-CCCCcEEEEeCCCcEEcHHHHHHHHHhCC
Confidence             467889999999888654 24899999999999999999999998764

>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}

Probab=81.93  E-value=19  Score=29.06  Aligned_cols=75  Identities=13%  Similarity=0.036  Sum_probs=45.4

Q ss_pred             ceEEEEEeecCCCCCcchHHHHHHHhhhCCCeEEeeccccCCChhHHHHHHHHHHhhCCCccEEEEeCCCeEEehHHHHH
Q 025375          166 GIIIRFVIGHSATSGGILDKAIDAEEKMHGDFLRLEHIEGYLELSAKTKTYFATAVSMWDAEFYIKVDDDVHVNLGKETF  245 (253)
Q Consensus       166 ~i~v~FVvG~s~~~~~~~~~~I~~E~~~ygDIL~ld~~DsY~nLt~Ktl~~f~wa~~~~~a~F~lKvDDDvfVnl~~L~~  245 (253)
                      .+.++.|-..+.   +.....+++-.+++..+..+. .++ .....    +...+......+|++.+|||.++.++.|..
T Consensus        34 ~~eiIvvDd~S~---d~t~~~~~~~~~~~~~i~~i~-~~n-~G~~~----a~N~g~~~a~g~~i~~lD~Dd~~~~~~l~~  104 (240)
T 3bcv_A           34 DIEIILIDDESP---DNCPKICDDYAAQYPNIKVIH-KKN-AGLGM----ACNSGLDVATGEYVAFCDSDDYVDSDMYMT  104 (240)
T ss_dssp             SEEEEEEECCCS---SSHHHHHHHHHHHCSSEEEEE-CCC-CCHHH----HHHHHHHHCCSSEEEECCTTCCCCTTHHHH
T ss_pred             CeEEEEEECCCC---cCHHHHHHHHHhhCCCEEEEE-CCC-CChHH----HHHHHHHHcCCCEEEEECCCCcCCHHHHHH
Confidence            467776665443   233444555455676776664 322 12222    233444444779999999999999888777


Q ss_pred             HHhh
Q 025375          246 YLVL  249 (253)
Q Consensus       246 ~L~~  249 (253)
                      .+..
T Consensus       105 l~~~  108 (240)
T 3bcv_A          105 MYNV  108 (240)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            6653

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00