Citrus Sinensis ID: 025378

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250---
Protein Sequence
MSQSSQHVFTNSPPSCSSRFTFYHSATNLIKNPNNLALPPPITSRHLLIHISHNDYTPFKFIPNSKFYHSLKPNNCSNTSVVTTQTNDNFNLDSLLSISEVLWSRVLACGVVSLVCGVWIGAIIRRRQWRRVCGEKARAEGRESVNLVGRIEKLEEDMKSSATILRVLSRQLEKLGVRFRVTRKALKDPITQAAALAQKNSEATRALAMQGDVLEKELGEIQKVLLAMQVSPITWFYHLSVLTVSIWNQYRHI
Secondary Structure (PSIPRED)
cccccccccccccccccccccHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccEEEEcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHccc
Secondary Structure Prediction (SSPRO)
cccccEEEEcccccccccHEcHHHHHHHHcccccccccccccccEEEEEEccccccccccccccccEEEEEEEccccccccEcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccEEEEEHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHEEEEEEEEEEHHHccccc
Coil and Loop (DISEMBL)
msqssqhvftnsppscssrftFYHSATNliknpnnlalpppitsrhllihishndytpfkfipnskfyhslkpnncsntsvvttqtndnfnldsLLSISEVLWSRVLACGVVSLVCGVWIGAIIRRRQWRRVCGEKARAEGRESVNLVGRIEKLEEDMKSSATILRVLSRQLEKLGVRFRVTRKALKDPITQAAALAQKNSEATRALAMQGDVLEKELGEIQKVLLAMQVSPITWFYHLSVLTVSIWNQYRHI
Flexible Loop (DISEMBL)
msqssqhvftnsppscsSRFTFYHSATNLIKNPNNLALPPPITSRHLLIHISHNDYTPFKFIPNSKFYHSLKPNNCSNTSVVTTQTNDNFNLDSLLSISEVLWSRVLACGVVSLVCGVWigaiirrrqwrrvcgekaraegresvnlvgriEKLEEDMKSSATILRVLSRQLEKLGVRFRVTRKALKDPITQAAALAQKNSEATRALAMQGDVLEKELGEIQKVLLAMQVSPITWFYHLSVLTVSIWNQYRHI
Low Complexity Region (SEG)
MSQSSQHVFTNSPPSCSSRFTFYHSATNLIKNPNNLALPPPITSRHLLIHISHNDYTPFKFIPNSKFYHSLKPNNCSNTSVVTTQTNDNFNLDSLLSISEVLWSRVLACGVVSLVCGVWIGAIIRRRQWRRVCGEKARAEGRESVNLVGRIEKLEEDMKSSATILRVLSRQLEKLGVRFRVTRKALKDPITQAAALAQKNSEATRALAMQGDVLEKELGEIQKVLLAMQVSPITWFYHLSVLTVSIWNQYRHI
Disordered region (IsUnstruct)
******************RFTFYHSATNLIKNPNNLALPPPITSRHLLIHISHNDYTPFKFIPNSKFYHSLKPNNCSNTSVVTTQTNDNFNLDSLLSISEVLWSRVLACGVVSLVCGVWIGAIIRRRQWRRVCGEKARA*****VNLVGRIE*********ATILRVLSRQLEKLGVRFRVTRKALKDPITQAA************LAMQGDVLEKELGEIQKVLLAMQVSPITWFYHLSVLTVSIWNQY***
Disordered Region (DISOPRED)
***********SPPSCSSRFTFYHSATNLIKNPNNLALPPPITSRHLLIHISHNDYTPFKFIPNSKFYHSLK****************NFNLDSLLSISEVLWSRVLACGVVSLVCGVWIGAIIRR***********************RIEKLE***K***TILRVLSRQLEKLGVRFRVTRKALKDPI*************TRALAMQ*D*******EIQKVLLAMQVSPITWFYHLSVLTVSIWNQYRH*
Disordered Region (DISEMBL)
**************SCSSRFTFYHSATNLIKNPNNLALPPPITSRHLLIHISHNDYTPFKFIPNSKFYHSLKPNNCSNTSVVTTQTNDNFNLDSLLSISEVLWSRVLACGVVSLVCGVWIGAIIRRRQWRRVCGEKARAEGRESVNLVGRIEKLEEDMKSSATILRVLSRQLEKLGVRFRVTRKALKDPITQAAALAQKNSEATRALAMQGDVLEKELGEIQKVLLAMQVSPITWFYHLSVLTVSIWNQYRHI
Disordered Region (DISPRO)
*****QHVFTNSPPSCSSRFTFYHSATNLIKNPNNLALPPPITSRHLLIHISHNDYTPFKFIPNSKFYHSLKPNNCSNTSVVTTQTNDNFNLDSLLSISEVLWSRVLACGVVSLVCGVWIGAIIRRRQWRRVCGEK*******SVNLVGRIEKLEEDMKSSATILRVLSRQLEKLGVRFRVTRKALKDPITQAAALAQKNSEATRALAMQGDVLEKELGEIQKVLLAMQVSPITWFYHLSVLTVSIWNQYR*I
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSQSSQHVFTNSPPSCSSRFTFYHSATNLIKNPNNLALPPPITSRHLLIHISHNDYTPFKFIPNSKFYHSLKPNNCSNTSVVTTQTNDNFNLDSLLSISEVLWSRVLACGVVSLVCGVWIGAIIRRRQWRRVCGEKARAEGRESVNLVGRxxxxxxxxxxxxxxxxxxxxxLEKLGVRFRVTRKALKDPITQAAALAQKNSEATRALAMQGDVLEKELGEIQKVLLAMQVSPITWFYHLSVLTVSIWNQYRHI
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	253
224093738	267	predicted protein [Populus trichocarpa]	0.818	0.775	0.503	4e-46
224083616	307	predicted protein [Populus trichocarpa]	0.814	0.671	0.472	2e-44
356512685	293	PREDICTED: uncharacterized protein LOC10	0.498	0.430	0.710	3e-41
18424929	300	uncharacterized protein [Arabidopsis tha	0.849	0.716	0.429	3e-40
356525459	287	PREDICTED: uncharacterized protein LOC10	0.498	0.439	0.695	6e-40
297797551	299	hypothetical protein ARALYDRAFT_496756 [	0.877	0.742	0.429	9e-40
449451421	323	PREDICTED: uncharacterized protein LOC10	0.786	0.616	0.464	1e-38
449520022	246	PREDICTED: uncharacterized LOC101207421,	0.549	0.565	0.547	6e-37
359496689	193	PREDICTED: uncharacterized protein LOC10	0.505	0.663	0.682	3e-35
116794014	379	unknown [Picea sitchensis]	0.462	0.308	0.606	2e-28

>gi|224093738|ref|XP_002309969.1| predicted protein [Populus trichocarpa] gi|222852872|gb|EEE90419.1| predicted protein [Populus trichocarpa]

 Score =  191 bits (484), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 130/258 (50%), Positives = 154/258 (59%), Gaps = 51/258 (19%)

Query: 8   VFTNSPPSCSSRFTFYHSATNLIKNPNNLALPPPITSRHLLIHI-SHNDYTPFKF---IP 63
           +F NSP     R T   ++T+L  +  NL L     SRH+   + SHN    F F    P
Sbjct: 14  LFNNSP----HRITLLFTSTSL--SLRNLTL-----SRHVNTSLHSHN----FHFKPQTP 58

Query: 64  NSKFYHSLKPNNCSNTSVVTTQTNDNFNLDSLLSISE-------------------VLWS 104
            S F  +LK      T  + TQ +  FNLD  LS++E                   VL S
Sbjct: 59  KSSFNLTLKAYQSDPT--IPTQDSKQFNLDHFLSVAELLCIFSSSIITISYALNYTVLNS 116

Query: 105 RVLACGVVSLVCG-VW----------IGAIIRRRQWRRVCGEKARAEGRESVNLVGRIEK 153
           +    GV+    G  W          IGA IRRR W RV  E  R   RES+NLVGRIEK
Sbjct: 117 KRGVLGVIGSNTGFAWGMVVMVSGVVIGAWIRRRMWWRVSRETGREGSRESLNLVGRIEK 176

Query: 154 LEEDMKSSATILRVLSRQLEKLGVRFRVTRKALKDPITQAAALAQKNSEATRALAMQGDV 213
           LEED++SSATI+RVLSRQLEKLG+RFRVTRKALK+PI + AALAQKNS+ATRALA+Q D+
Sbjct: 177 LEEDLRSSATIIRVLSRQLEKLGIRFRVTRKALKEPIAETAALAQKNSDATRALAVQEDI 236

Query: 214 LEKELGEIQKVLLAMQVS 231
           LEKELGEIQKVLLAMQVS
Sbjct: 237 LEKELGEIQKVLLAMQVS 254

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224083616|ref|XP_002307074.1| predicted protein [Populus trichocarpa] gi|222856523|gb|EEE94070.1| predicted protein [Populus trichocarpa]

 Score =  184 bits (468), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 118/250 (47%), Positives = 150/250 (60%), Gaps = 44/250 (17%)

Query: 7   HVFTNSPPSCSSRFTFYHSATNLIKNPNNLALPPPITSRHLLIHISHNDYTPFKFIPNSK 66
           H+FTNSPP  +  F+    +   +             SRH+   +  +++      P + 
Sbjct: 9   HLFTNSPPRITLLFSSSSLSLRNLS-----------LSRHVTTSLHSSNFHFKPQTPRNS 57

Query: 67  FYHSLKPNNCSNTSVVTTQTNDNFNLDSLLSISEVL-----------------WSRVLAC 109
           F  +LK      T  + TQ ++ FNLD  LSI+E+L                 +S+  A 
Sbjct: 58  FSFTLKAYQSDPT--IRTQVSNQFNLDQFLSIAELLCIISSSIITISYALNCTFSKTGAL 115

Query: 110 GVVSLVCG-VW----------IGAIIRRRQWRRVCGEKARAEGRESVNLVGRIEKLEEDM 158
           GV+    G  W          IGA IRRRQW R+C E  R EG  S+NLVGRIEKLE+DM
Sbjct: 116 GVIGSNTGFAWGMVVMVSGVVIGAWIRRRQWWRICRETGR-EG--SLNLVGRIEKLEQDM 172

Query: 159 KSSATILRVLSRQLEKLGVRFRVTRKALKDPITQAAALAQKNSEATRALAMQGDVLEKEL 218
           +SSATI+RVLSRQLEKLG+RFRVTRKALK+PI + AALAQKNSEATRALA+Q ++LEKEL
Sbjct: 173 RSSATIIRVLSRQLEKLGIRFRVTRKALKEPIVETAALAQKNSEATRALALQENILEKEL 232

Query: 219 GEIQKVLLAM 228
           GE QK+LLAM
Sbjct: 233 GETQKILLAM 242

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356512685|ref|XP_003525047.1| PREDICTED: uncharacterized protein LOC100790782 [Glycine max]

 Score =  174 bits (441), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 91/128 (71%), Positives = 103/128 (80%), Gaps = 2/128 (1%)

Query: 102 LWSRVLACGVVSLVCGVWIGAIIRRRQWRRVCGEKARAEGRESVNLVGRIEKLEEDMKSS 161
           + +R    G   LV GV +GA IRRRQWRR C E  +  G   VNL+ RIEKLEEDM+SS
Sbjct: 118 IGTRAAPFGGALLVVGVLVGAWIRRRQWRRACVETGK--GGLEVNLLERIEKLEEDMRSS 175

Query: 162 ATILRVLSRQLEKLGVRFRVTRKALKDPITQAAALAQKNSEATRALAMQGDVLEKELGEI 221
           AT++RVLSRQLEKLGVRFRVTRKALKDPI + AALAQKNSEA RALA+Q D+LEKELGEI
Sbjct: 176 ATVVRVLSRQLEKLGVRFRVTRKALKDPIAETAALAQKNSEAARALAVQSDILEKELGEI 235

Query: 222 QKVLLAMQ 229
           Q+VLLAMQ
Sbjct: 236 QQVLLAMQ 243

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18424929|ref|NP_569009.1| uncharacterized protein [Arabidopsis thaliana] gi|10178187|dbj|BAB11661.1| unnamed protein product [Arabidopsis thaliana] gi|15028313|gb|AAK76633.1| unknown protein [Arabidopsis thaliana] gi|19310695|gb|AAL85078.1| unknown protein [Arabidopsis thaliana] gi|332010646|gb|AED98029.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  171 bits (433), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 106/247 (42%), Positives = 145/247 (58%), Gaps = 32/247 (12%)

Query: 8   VFTNSPP---SCSSRFTFYHSATNLIKNPNNLALPPPITSRHLLIHISHNDYTPFKFIPN 64
           +F+ S P   S  S   F  SA    +  ++++ P PI  RH+ I    N      +  +
Sbjct: 11  LFSGSTPVRISRRSNLCFAVSAARASRR-DSISFPQPIFLRHV-ISTQSNFEIDRNYRAH 68

Query: 65  SKFYHSLKPNNCSNTSVVTTQTNDNFNLDSLLSISEVL---------------------- 102
           +    S + ++ SN  ++   ++D F+L S +S +E L                      
Sbjct: 69  ASSIGSFEDSSSSN--LLEDASSDGFDLGSFVSFAEALCILSSAVISVVLAVNYVVVGEI 126

Query: 103 WSRVLACGVVSLVCGVWIGAIIRRRQWRRVCGEKARAEGRESVNLVGRIEKLEEDMKSSA 162
             +VL+ G V LV  V  G+ +RRRQW R+C     +EG    NL+ R+EKLE+D+KSS 
Sbjct: 127 GKKVLSLGFVGLVGSVATGSWLRRRQWMRICKGARESEG---TNLIRRLEKLEKDLKSST 183

Query: 163 TILRVLSRQLEKLGVRFRVTRKALKDPITQAAALAQKNSEATRALAMQGDVLEKELGEIQ 222
           +I+RVLSR LEKLG+RFRVTRKALK+PI++ AALAQKNSEATR L  Q ++LEKELGEIQ
Sbjct: 184 SIVRVLSRHLEKLGIRFRVTRKALKEPISETAALAQKNSEATRVLVAQQEILEKELGEIQ 243

Query: 223 KVLLAMQ 229
           KVLLAMQ
Sbjct: 244 KVLLAMQ 250

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356525459|ref|XP_003531342.1| PREDICTED: uncharacterized protein LOC100809936 [Glycine max]

 Score =  170 bits (430), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 89/128 (69%), Positives = 102/128 (79%), Gaps = 2/128 (1%)

Query: 102 LWSRVLACGVVSLVCGVWIGAIIRRRQWRRVCGEKARAEGRESVNLVGRIEKLEEDMKSS 161
           + +R    G   LV GV +GA IRRRQWRRV  E  +  G   VNL+ RIEKLEED++SS
Sbjct: 112 IGARAAPFGGALLVVGVLVGAWIRRRQWRRVSVEAGK--GGLEVNLLERIEKLEEDLRSS 169

Query: 162 ATILRVLSRQLEKLGVRFRVTRKALKDPITQAAALAQKNSEATRALAMQGDVLEKELGEI 221
           AT++RVLSRQLEKLGVRFRVTRK LKDPI + AALAQKNSEA RALA+Q D+LEKELGEI
Sbjct: 170 ATVVRVLSRQLEKLGVRFRVTRKGLKDPIAETAALAQKNSEAARALAVQSDILEKELGEI 229

Query: 222 QKVLLAMQ 229
           Q+VLLAMQ
Sbjct: 230 QQVLLAMQ 237

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297797551|ref|XP_002866660.1| hypothetical protein ARALYDRAFT_496756 [Arabidopsis lyrata subsp. lyrata] gi|297312495|gb|EFH42919.1| hypothetical protein ARALYDRAFT_496756 [Arabidopsis lyrata subsp. lyrata]

 Score =  169 bits (428), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 109/254 (42%), Positives = 149/254 (58%), Gaps = 32/254 (12%)

Query: 1   MSQSSQH-VFTNSPPSCSSR--FTFYHSATNLIKNPNNLALPPPITSRHLLIHISHNDYT 57
           +S  SQ+ +F+ S P   SR    F  SA    +  ++++ P PI  RH+ I    N   
Sbjct: 3   LSLPSQYALFSGSTPVRISRSNLCFAVSAARTSRR-DSISFPQPILLRHV-ISTRSNFEI 60

Query: 58  PFKFIPNSKFYHSLKPNNCSNTSVVTTQTNDNFNLDSLLSISEVL--------------- 102
              +  ++    S + ++ SN   +    +D F+L S +S +E L               
Sbjct: 61  DRDYRAHASSIGSYEDSSSSNE--LEDANSDGFDLGSFVSFAEALCILSSAVISVVLAVN 118

Query: 103 -------WSRVLACGVVSLVCGVWIGAIIRRRQWRRVCGEKARAEGRESVNLVGRIEKLE 155
                    +VL+ G V LV  V  G+ +RRRQW R+C     +EG    NL+ R+EKLE
Sbjct: 119 YVVVGEIGKKVLSLGFVGLVGSVATGSWLRRRQWMRICKGARESEG---TNLIRRLEKLE 175

Query: 156 EDMKSSATILRVLSRQLEKLGVRFRVTRKALKDPITQAAALAQKNSEATRALAMQGDVLE 215
           +D+KSS +I+RVLSR LEKLG+RFRVTRKALK+PI++ AALAQKNSEATR LA Q ++LE
Sbjct: 176 KDLKSSTSIVRVLSRHLEKLGIRFRVTRKALKEPISETAALAQKNSEATRVLAAQQEILE 235

Query: 216 KELGEIQKVLLAMQ 229
           KELGEIQKVLLA+Q
Sbjct: 236 KELGEIQKVLLALQ 249

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449451421|ref|XP_004143460.1| PREDICTED: uncharacterized protein LOC101207421 [Cucumis sativus]

 Score =  166 bits (419), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 110/237 (46%), Positives = 137/237 (57%), Gaps = 38/237 (16%)

Query: 26  ATNLIKNPNNLALPPPITSRHLLIHISHNDY---TPFKFIPNSKFYHSLKPN-NCSNTSV 81
           +T L +NP  ++LP P +     +H    DY   +PF F   S   H   P  + S    
Sbjct: 41  STFLSRNPC-VSLPFPPSRFPNTLHFQILDYKFRSPFNF--GSINAHHFCPRVSTSGGVG 97

Query: 82  VTTQTNDNFNLDSLLSISE-----------------------------VLWSRVLACGVV 112
                  +F++DSLLS +E                             V    VL   ++
Sbjct: 98  RRPGGVADFDIDSLLSATEFFCLVASLIGSVGFALNCAKTRSKSLFLAVFGDGVLVGTIL 157

Query: 113 SLVCGVWIGAIIRRRQWRRVCGEKARAEGRESVNLVGRIEKLEEDMKSSATILRVLSRQL 172
            LV GV IGA IRRRQW RV  E A+  G   VNL+ +  KLEED++SSAT++RVLSRQL
Sbjct: 158 FLVAGVAIGAWIRRRQWNRVFRETAK--GVLEVNLMEKTNKLEEDLRSSATLIRVLSRQL 215

Query: 173 EKLGVRFRVTRKALKDPITQAAALAQKNSEATRALAMQGDVLEKELGEIQKVLLAMQ 229
           EKLG+RFRVTRKALK P+ + AALAQK SEATRALA++GD+LEKEL EIQKVLLAMQ
Sbjct: 216 EKLGIRFRVTRKALKKPVEETAALAQKTSEATRALAVRGDILEKELAEIQKVLLAMQ 272

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449520022|ref|XP_004167033.1| PREDICTED: uncharacterized LOC101207421, partial [Cucumis sativus]

 Score =  160 bits (404), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 93/170 (54%), Positives = 112/170 (65%), Gaps = 31/170 (18%)

Query: 89  NFNLDSLLSISE-----------------------------VLWSRVLACGVVSLVCGVW 119
           +F++DSLLS +E                             V    VL   ++ LV GV 
Sbjct: 28  DFDIDSLLSATEFFCLVASLIGSVGFALNCAKTRSKSLFLAVFGDGVLVGTILFLVAGVA 87

Query: 120 IGAIIRRRQWRRVCGEKARAEGRESVNLVGRIEKLEEDMKSSATILRVLSRQLEKLGVRF 179
           IGA IRRRQW RV  E A+  G   VNL+ +  KLEED++SSAT++RVLSRQLEKLG+RF
Sbjct: 88  IGAWIRRRQWNRVFRETAK--GVLEVNLMEKTNKLEEDLRSSATLIRVLSRQLEKLGIRF 145

Query: 180 RVTRKALKDPITQAAALAQKNSEATRALAMQGDVLEKELGEIQKVLLAMQ 229
           RVTRKALK P+ + AALAQK SEATRALA++GD+LEKEL EIQKVLLAMQ
Sbjct: 146 RVTRKALKKPVEETAALAQKTSEATRALAVRGDILEKELAEIQKVLLAMQ 195

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359496689|ref|XP_002269557.2| PREDICTED: uncharacterized protein LOC100244969 [Vitis vinifera]

 Score =  154 bits (390), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 88/129 (68%), Positives = 107/129 (82%), Gaps = 1/129 (0%)

Query: 101 VLWSRVLACGVVSLVCGVWIGAIIRRRQWRRVCGEKARAEGRESVNLVGRIEKLEEDMKS 160
           VL +R+L    V+LV GV +G+ IRRRQW R+  + A+  G ESVNLV R+EK+EED++S
Sbjct: 3   VLGNRILLWQAVALVGGVVVGSWIRRRQWWRIFNDTAKP-GIESVNLVERMEKMEEDIRS 61

Query: 161 SATILRVLSRQLEKLGVRFRVTRKALKDPITQAAALAQKNSEATRALAMQGDVLEKELGE 220
            AT++RV+SRQLEKLG+RFRVTRKALK PI + A LAQKNSEATRALA+Q D+LEKELGE
Sbjct: 62  MATLIRVMSRQLEKLGIRFRVTRKALKQPIAETAVLAQKNSEATRALAIQEDILEKELGE 121

Query: 221 IQKVLLAMQ 229
           IQKVLLAMQ
Sbjct: 122 IQKVLLAMQ 130

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|116794014|gb|ABK26972.1| unknown [Picea sitchensis]

 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 74/122 (60%), Positives = 90/122 (73%), Gaps = 5/122 (4%)

Query: 111 VVSLVCGVWIGAIIRRRQWRRVCG----EKARAEGRESVNLVGRIEKLEEDMKSSATILR 166
           ++ L+  + I AIIR RQW R+      + A +EG E  +L+ RI+KLEED+ SS TI+R
Sbjct: 137 ILPLLGALIISAIIRTRQWERLTAVGPKDHANSEGSE-FSLIHRIKKLEEDVGSSVTIIR 195

Query: 167 VLSRQLEKLGVRFRVTRKALKDPITQAAALAQKNSEATRALAMQGDVLEKELGEIQKVLL 226
           VLSRQLEKLGVRFRVTR+ L+DPI + AALAQK SEA R L +Q DVLEKEL  IQ VLL
Sbjct: 196 VLSRQLEKLGVRFRVTRQTLRDPINETAALAQKTSEAIRVLELQEDVLEKELRGIQHVLL 255

Query: 227 AM 228
           AM
Sbjct: 256 AM 257

Source: Picea sitchensis

Species: Picea sitchensis

Genus: Picea

Family: Pinaceae

Order: Coniferales

Class: Coniferopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	253
TAIR|locus:2171865	300	AT5G65250 "AT5G65250" [Arabido	0.482	0.406	0.648	2.2e-42

TAIR|locus:2171865 AT5G65250 "AT5G65250" [Arabidopsis thaliana (taxid:3702)]

 Score = 388 (141.6 bits), Expect = 2.2e-42, Sum P(2) = 2.2e-42
 Identities = 81/125 (64%), Positives = 99/125 (79%)

Query:   105 RVLACGVVSLVCGVWIGAIIRRRQWRRVCGEKARAEGRESVNLVGRIEKLEEDMKSSATI 164
             +VL+ G V LV  V  G+ +RRRQW R+C     +EG    NL+ R+EKLE+D+KSS +I
Sbjct:   129 KVLSLGFVGLVGSVATGSWLRRRQWMRICKGARESEG---TNLIRRLEKLEKDLKSSTSI 185

Query:   165 LRVLSRQLEKLGVRFRVTRKALKDPITQAAALAQKNSEATRALAMQGDVLEKELGEIQKV 224
             +RVLSR LEKLG+RFRVTRKALK+PI++ AALAQKNSEATR L  Q ++LEKELGEIQKV
Sbjct:   186 VRVLSRHLEKLGIRFRVTRKALKEPISETAALAQKNSEATRVLVAQQEILEKELGEIQKV 245

Query:   225 LLAMQ 229
             LLAMQ
Sbjct:   246 LLAMQ 250

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0009941 "chloroplast envelope" evidence=IDA

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: eugene3.00070511 hypothetical protein (267 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	253
PRK06975	656	bifunctional uroporphyrinogen-III synthetase/uropo	87.28
PF10805	106	DUF2730: Protein of unknown function (DUF2730); In	84.54

>PRK06975 bifunctional uroporphyrinogen-III synthetase/uroporphyrin-III C-methyltransferase; Reviewed

Probab=87.28  E-value=3.2  Score=41.60  Aligned_cols=47  Identities=13%  Similarity=0.098  Sum_probs=37.3

Q ss_pred             ccchHHHHHHHHhhhhHHHHHHHhhhhhHHHHHHHHHHHHHHhhccc
Q 025378          186 LKDPITQAAALAQKNSEATRALAMQGDVLEKELGEIQKVLLAMQVSP  232 (253)
Q Consensus       186 LrdPI~etaAlAqknSeatraLA~redlLEkEL~eiQ~vL~AMQeqq  232 (253)
                      +..+..|...++++..+..+.+..|.+.||.++.+.|+-..++|++-
T Consensus       362 ~~~~~~e~~~~~~~~~~~~~~~~~~l~~le~~l~~~~~~~~~L~~~~  408 (656)
T PRK06975        362 NDAQTAELRVKTEQAQASVHQLDSQFAQLDGKLADAQSAQQALEQQY  408 (656)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            44455666667777778888999999999999999998888877654

>PF10805 DUF2730: Protein of unknown function (DUF2730); InterPro: IPR020269 This entry represents a family of various hypothetical proteins

Probab=84.54  E-value=15  Score=29.08  Aligned_cols=30  Identities=23%  Similarity=0.241  Sum_probs=15.2

Q ss_pred             HHHHHHHhhhhHHHHHHHhhhh-hHHHHHHH
Q 025378          191 TQAAALAQKNSEATRALAMQGD-VLEKELGE  220 (253)
Q Consensus       191 ~etaAlAqknSeatraLA~red-lLEkEL~e  220 (253)
                      .+.--.-+..++-++++.++-+ +||+||++
T Consensus        75 ~el~G~~~~l~~~l~~v~~~~~lLlE~~lk~  105 (106)
T PF10805_consen   75 AELRGELKELSARLQGVSHQLDLLLENELKK  105 (106)
T ss_pred             HHHHhHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence            3333333444444555555544 46777753

The proteins, which include HI1498 and Gp25, from phage Mu, are currently uncharacterised.

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00