Citrus Sinensis ID: 025527

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-
Protein Sequence
MAAARNVAAGDGSRVFRDEEESVNGKVKEGDESPTAKRFKSERFPLTHWEFAAFVGVFLLFVTGLFCIYLTMPAADYGKLKLPRTIADLRLLKDNLATYAQDYPVPFIIGYCSTYIFMQTFMIPGTIFMSLLAGALFGVIRGLILVVFNATAGASSCFFLSKLIGRPLVSWFWPEKLRFFQAEIAKRREKLLNYMLFLRITPSLPNLFINLASPIVDIPFHIFFLATLIGLIPASYITVRPRRCVILVVKR
Secondary Structure (PSIPRED)
ccccccccccccccccccHHHHHccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHcccccHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Secondary Structure Prediction (SSPRO)
cccccccEcccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHEHEEccccccccccHEHHHHHHccccccEEEEEcccEEEEEEEc
Coil and Loop (DISEMBL)
MAAARnvaagdgsrvfrdeeesvngkvkegdesptakrfkserfplthWEFAAFVGVFLLFVTGLFCIYltmpaadygklklprTIADLRLLKDNLAtyaqdypvpfiIGYCSTYIFMQTFMIPGTIFMSLLAGALFGVIRGLILVVFNATAGASSCFFLSKligrplvswfwpeKLRFFQAEIAKRREKLLNYMLFLRitpslpnlfinlaspivdipfHIFFLATLIglipasyitvrprRCVILVVKR
Flexible Loop (DISEMBL)
maaarnvaagdgsrvfrdeeesvngkvkegdesptakrfkserFPLTHWEFAAFVGVFLLFVTGLFCIYLTMPAADYGKLKLPRTIADLRLLKDNLATYAQDYPVPFIIGYCSTYIFMQTFMIPGTIFMSLLAGALFGVIRGLILVVFNATAGASSCFFLSKLIGRPLVSWFWPEKLRFFQAEIAKRREKLLNYMLFLRITPSLPNLFINLASPIVDIPFHIFFLATLIGlipasyitvrprRCVILVVKR
Low Complexity Region (SEG)
MAAARNVAAGDGSRVFRDEEESVNGKVKEGDESPTAKRFKSERFPLTHWEfaafvgvfllfvtglfCIYLTMPAADYGKLKLPRTIADLRLLKDNLATYAQDYPVPFIIGYCSTYIFMQTFMIPGTIFMSLLAGALFGVIRGLILVVFNATAGASSCFFLSKLIGRPLVSWFWPEKLRFFQAEIAKRREKLLNYMLFLRITPSLPNLFINLASPIVDIPFHIFFLATLIGLIPASYITVRPRRCVILVVKR
Disordered region (IsUnstruct)
******************************************RFPLTHWEFAAFVGVFLLFVTGLFCIYLTMPAADYGKLKLPRTIADLRLLKDNLATYAQDYPVPFIIGYCSTYIFMQTFMIPGTIFMSLLAGALFGVIRGLILVVFNATAGASSCFFLSKLIGRPLVSWFWPEKLRFFQAEIAKRREKLLNYMLFLRITPSLPNLFINLASPIVDIPFHIFFLATLIGLIPASYITVRPRRCVILVV**
Disordered Region (DISOPRED)
*************************************************EFAAFVGVFLLFVTGLFCIYLTMPAADYGKLKLPRTIADLRLLKDNLATYAQDYPVPFIIGYCSTYIFMQTFMIPGTIFMSLLAGALFGVIRGLILVVFNATAGASSCFFLSKLIGRPLVSWFWPEKLRFFQAEIAKRREKLLNYMLFLRITPSLPNLFINLASPIVDIPFHIFFLATLIGLIPASYITVRPRRCVILV***
Disordered Region (DISEMBL)
***********************************AKRFKSERFPLTHWEFAAFVGVFLLFVTGLFCIYLTMPAADYGKLKLPRTIADLRLLKDNLATYAQDYPVPFIIGYCSTYIFMQTFMIPGTIFMSLLAGALFGVIRGLILVVFNATAGASSCFFLSKLIGRPLVSWFWPEKLRFFQAEIAKRREKLLNYMLFLRITPSLPNLFINLASPIVDIPFHIFFLATLIGLIPASYITVRPRRCVILVVKR
Disordered Region (DISPRO)
******************************************RFPLTHWEFAAFVGVFLLFVTGLFCIYLTMPAADYGKLKLPRTIADLRLLKDNLATYAQDYPVPFIIGYCSTYIFMQTFMIPGTIFMSLLAGALFGVIRGLILVVFNATAGASSCFFLSKLIGRPLVSWFWPEKLRFFQAEIAKRREKLLNYMLFLRITPSLPNLFINLASPIVDIPFHIFFLATLIGLIPASYITVRPRRCVILVVKR
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiii
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHHHHHHHHHoooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAAARNVAAGDGSRVFRDEEESVNGKVKEGDESPTAKRFKSERFPLTHWEFAAFVGVFLLFVTGLFCIYLTMPAADYGKLKLPRTIADLRLLKDNLATYAQDYPVPFIIGYCSTYIFMQTFMIPGTIFMSLLAGALFGVIRGLILVVFNATAGASSCFFLSKLIGRPLVSWFWPEKLRFFQAEIAKRREKLLNYMLFLRITPSLPNLFINLASPIVDIPFHIFFLATLIGLIPASYITVRPRRCVILVVKR
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	251	2.2.26 [Sep-21-2011]
Q8L586	287	Uncharacterized membrane	yes	no	0.956	0.836	0.754	1e-105
Q8MXN7	334	Transmembrane protein 41	yes	no	0.780	0.586	0.408	1e-37
Q5U4K5	278	Transmembrane protein 41B	N/A	no	0.880	0.794	0.359	4e-36
Q8K1A5	291	Transmembrane protein 41B	yes	no	0.888	0.766	0.353	9e-36
Q5RBZ8	291	Transmembrane protein 41B	yes	no	0.892	0.769	0.334	1e-35
Q9VX39	320	Transmembrane protein 41	yes	no	0.737	0.578	0.404	1e-35
A1A5V7	282	Transmembrane protein 41B	yes	no	0.892	0.794	0.344	2e-35
Q5ZIL6	269	Transmembrane protein 41B	yes	no	0.741	0.691	0.386	7e-35
Q5BJD5	291	Transmembrane protein 41B	yes	no	0.741	0.639	0.386	9e-35
A4II98	278	Transmembrane protein 41B	yes	no	0.741	0.669	0.386	1e-34

>sp|Q8L586|Y4958_ARATH Uncharacterized membrane protein At4g09580 OS=Arabidopsis thaliana GN=At4g09580 PE=1 SV=1

 Score =  382 bits (982), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 184/244 (75%), Positives = 210/244 (86%), Gaps = 4/244 (1%)

Query: 1   MAAARNVAAGDGSR-VFRDEEESVNGKVKEG---DESPTAKRFKSERFPLTHWEFAAFVG 56
           MAA RN+    G+R + +DEE        +G   D+SPT KR KSERFPL+ WEFA F  
Sbjct: 1   MAAPRNLTGDGGARQLVKDEESPAASSAAKGLLNDDSPTGKRTKSERFPLSRWEFAVFFT 60

Query: 57  VFLLFVTGLFCIYLTMPAADYGKLKLPRTIADLRLLKDNLATYAQDYPVPFIIGYCSTYI 116
           VFL+F TGLFCIYLTMPAA+YGKLK+PRTI+DLRLLK+NL +YA +Y   FI+GYCSTYI
Sbjct: 61  VFLVFTTGLFCIYLTMPAAEYGKLKVPRTISDLRLLKENLGSYASEYQARFILGYCSTYI 120

Query: 117 FMQTFMIPGTIFMSLLAGALFGVIRGLILVVFNATAGASSCFFLSKLIGRPLVSWFWPEK 176
           FMQTFMIPGTIFMSLLAGALFGV+RG +LVV NATAGA SCFFLSKL+GRPLV+W WPEK
Sbjct: 121 FMQTFMIPGTIFMSLLAGALFGVVRGFVLVVLNATAGACSCFFLSKLVGRPLVNWLWPEK 180

Query: 177 LRFFQAEIAKRREKLLNYMLFLRITPSLPNLFINLASPIVDIPFHIFFLATLIGLIPASY 236
           LRFFQAEIAKRR++LLNYMLFLRITP+LPNLFINL+SPIVDIPFH+FFLATL+GL+PASY
Sbjct: 181 LRFFQAEIAKRRDRLLNYMLFLRITPTLPNLFINLSSPIVDIPFHVFFLATLVGLMPASY 240

Query: 237 ITVR 240
           ITVR
Sbjct: 241 ITVR 244

Arabidopsis thaliana (taxid: 3702)

>sp|Q8MXN7|TM41_DICDI Transmembrane protein 41 homolog OS=Dictyostelium discoideum GN=DDB_G0275543 PE=3 SV=2

 Score =  156 bits (395), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 80/196 (40%), Positives = 121/196 (61%)

Query: 45  PLTHWEFAAFVGVFLLFVTGLFCIYLTMPAADYGKLKLPRTIADLRLLKDNLATYAQDYP 104
           PL  W      GV +  +  LF  + ++       ++LP+   D++LL D L+ Y  D  
Sbjct: 96  PLPLWLLVIVFGVSISVIVFLFLNFPSLSPQHKQLIRLPKNFKDVKLLSDILSQYTDDNY 155

Query: 105 VPFIIGYCSTYIFMQTFMIPGTIFMSLLAGALFGVIRGLILVVFNATAGASSCFFLSKLI 164
              I  +   Y F+Q F IPG++F+S L+G LFG+  G  LV F AT GA+  + +S  I
Sbjct: 156 FIVITTFGVIYTFLQAFSIPGSVFLSFLSGGLFGLKVGFPLVCFVATLGATFSYLISYYI 215

Query: 165 GRPLVSWFWPEKLRFFQAEIAKRREKLLNYMLFLRITPSLPNLFINLASPIVDIPFHIFF 224
           GR LV   +P+KL+ F   ++++R+ LLNY++FLRITP LPN FINLASP++D+P H F 
Sbjct: 216 GRNLVRKLFPDKLKLFSDSLSQKRDNLLNYIVFLRITPFLPNWFINLASPLLDVPIHTFA 275

Query: 225 LATLIGLIPASYITVR 240
           + T IG++PA+++ V+
Sbjct: 276 IGTFIGIMPATFLAVK 291

Dictyostelium discoideum (taxid: 44689)

>sp|Q5U4K5|TM41B_XENLA Transmembrane protein 41B OS=Xenopus laevis GN=tmem41b PE=2 SV=1

 Score =  151 bits (382), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 83/231 (35%), Positives = 132/231 (57%), Gaps = 10/231 (4%)

Query: 19  EEESVNG----KVKEGDE--SPTAKRFKSERFPLTHWEFAAFVGVFLLFVTGLFCIYLTM 72
            E S  G    +   G+E  +P A +  SE            V +FL   + +F +Y   
Sbjct: 4   HERSHTGGHTFQCNHGNEKKAPAAGKVHSEGGS-ARMSLLILVSIFLCAASVMFLVYKYF 62

Query: 73  PA---ADYGKLKLPRTIADLRLLKDNLATYAQDYPVPFIIGYCSTYIFMQTFMIPGTIFM 129
           P     +  K+K+PR + D + L   L+ Y   + V  ++ Y +TYIF+QTF IPG+IF+
Sbjct: 63  PQLSEEELEKIKVPRDMDDAKALGKVLSKYKDTFYVEVLVAYFTTYIFLQTFAIPGSIFL 122

Query: 130 SLLAGALFGVIRGLILVVFNATAGASSCFFLSKLIGRPLVSWFWPEKLRFFQAEIAKRRE 189
           S+L+G L+     L LV   +  GAS C+ LS L+GRP+V  +  +K   +  ++ + R+
Sbjct: 123 SILSGFLYPFPLALFLVCLCSGLGASFCYLLSYLVGRPVVYKYLSDKAIKWSQQVERHRD 182

Query: 190 KLLNYMLFLRITPSLPNLFINLASPIVDIPFHIFFLATLIGLIPASYITVR 240
            L+NY++FLRITP LPN FIN+ SP++++P  +FFL T IG+ P S++ ++
Sbjct: 183 HLINYIIFLRITPFLPNWFINITSPVINVPLKVFFLGTFIGVAPPSFVAIK 233

Xenopus laevis (taxid: 8355)

>sp|Q8K1A5|TM41B_MOUSE Transmembrane protein 41B OS=Mus musculus GN=Tmem41b PE=2 SV=1

 Score =  150 bits (379), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 82/232 (35%), Positives = 130/232 (56%), Gaps = 9/232 (3%)

Query: 12  GSRVFRDEEESVNGKVKEGDESPTAKRFKSERFPLTHWEFAAFVGVFLLFVTGLFCIYLT 71
           G R  R +  +  G     +E P A+   S R  L        V +F      +F +Y  
Sbjct: 21  GDRAVRTQGSAAPGSKDHLNEKPCAEA-GSARTSLL-----ILVSIFSCAAFVMFLVYKN 74

Query: 72  MPA---ADYGKLKLPRTIADLRLLKDNLATYAQDYPVPFIIGYCSTYIFMQTFMIPGTIF 128
            P     +   +K+PR + D + L   L+ Y   + V  ++ Y +TYIF+QTF IPG+IF
Sbjct: 75  FPQLSEEERVNMKVPRDMDDAKALGKVLSKYKDTFYVQVLVAYFATYIFLQTFAIPGSIF 134

Query: 129 MSLLAGALFGVIRGLILVVFNATAGASSCFFLSKLIGRPLVSWFWPEKLRFFQAEIAKRR 188
           +S+L+G L+     L LV   +  GAS C+ LS L+GRP+V  +  EK   +  ++ + R
Sbjct: 135 LSILSGFLYPFPLALFLVCLCSGLGASFCYMLSYLVGRPVVYKYLTEKAVKWSQQVERHR 194

Query: 189 EKLLNYMLFLRITPSLPNLFINLASPIVDIPFHIFFLATLIGLIPASYITVR 240
           E L+NY++FLRITP LPN FIN+ SP++++P  +FF+ T +G+ P S++ ++
Sbjct: 195 EHLINYIIFLRITPFLPNWFINITSPVINVPLKVFFIGTFLGVAPPSFVAIK 246

Mus musculus (taxid: 10090)

>sp|Q5RBZ8|TM41B_PONAB Transmembrane protein 41B OS=Pongo abelii GN=TMEM41B PE=2 SV=1

 Score =  150 bits (378), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 84/251 (33%), Positives = 135/251 (53%), Gaps = 27/251 (10%)

Query: 1   MAAARNVAAGDGSRVFRDEEESVNGKVKEGDESPTAKRFKSERFPLTHWEFAA------- 53
           M A      GDG+   R            G  +P ++ ++ E+     W  A        
Sbjct: 12  MGADHTTPVGDGAAGTR------------GPAAPGSRDYQKEK----SWAEAGSARMSLL 55

Query: 54  -FVGVFLLFVTGLFCIYLTMPA---ADYGKLKLPRTIADLRLLKDNLATYAQDYPVPFII 109
             V +FL     +F +Y   P     +   +K+PR + D + L   L+ Y   + V  ++
Sbjct: 56  ILVSIFLSAAFVMFLVYKNFPQLSEEERVNMKVPRDMDDAKALGKVLSKYKDTFYVQVLV 115

Query: 110 GYCSTYIFMQTFMIPGTIFMSLLAGALFGVIRGLILVVFNATAGASSCFFLSKLIGRPLV 169
            Y +TYIF+QTF IPG+IF+S+L+G L+     L LV   +  GAS C+ LS L+GRP+V
Sbjct: 116 AYFATYIFLQTFAIPGSIFLSILSGFLYPFPLALFLVCLCSGLGASFCYMLSYLVGRPVV 175

Query: 170 SWFWPEKLRFFQAEIAKRREKLLNYMLFLRITPSLPNLFINLASPIVDIPFHIFFLATLI 229
             +  EK   +  ++ + RE L+NY++FLRITP LPN FIN+ SP++++P  +FF+ T +
Sbjct: 176 YKYLTEKAVKWSQQVERHREHLINYIIFLRITPFLPNWFINITSPVINVPLKVFFIGTFL 235

Query: 230 GLIPASYITVR 240
           G+ P S++ ++
Sbjct: 236 GVAPPSFVAIK 246

Pongo abelii (taxid: 9601)

>sp|Q9VX39|TM41_DROME Transmembrane protein 41 homolog OS=Drosophila melanogaster GN=CG8408 PE=2 SV=2

 Score =  150 bits (378), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 76/188 (40%), Positives = 112/188 (59%), Gaps = 3/188 (1%)

Query: 56  GVFLLFVTGLFCIYLTMP---AADYGKLKLPRTIADLRLLKDNLATYAQDYPVPFIIGYC 112
           G+F+  +  +  +Y   P   A++   LK+PR I D ++L   L  Y   Y    + G  
Sbjct: 87  GIFVASLVTMCYVYAIFPELNASEKQHLKIPRDIQDAKMLAKVLDRYKDMYYFEVMFGVV 146

Query: 113 STYIFMQTFMIPGTIFMSLLAGALFGVIRGLILVVFNATAGASSCFFLSKLIGRPLVSWF 172
             Y+F+QTF IPG++F+S+L G L+     L L+ F +  GA+ C+ LS L+GR L+  F
Sbjct: 147 VAYVFLQTFAIPGSLFLSILLGFLYKFPIALFLICFCSALGATLCYTLSNLVGRRLIRHF 206

Query: 173 WPEKLRFFQAEIAKRREKLLNYMLFLRITPSLPNLFINLASPIVDIPFHIFFLATLIGLI 232
           WP+K   +   + + R+ L NYMLFLR+TP LPN FINLASP++ +P HIF L T  G+ 
Sbjct: 207 WPKKTSEWSKHVEEYRDSLFNYMLFLRMTPILPNWFINLASPVIGVPLHIFALGTFCGVA 266

Query: 233 PASYITVR 240
           P S I ++
Sbjct: 267 PPSVIAIQ 274

Drosophila melanogaster (taxid: 7227)

>sp|A1A5V7|TM41B_DANRE Transmembrane protein 41B OS=Danio rerio GN=tmem41b PE=2 SV=1

 Score =  149 bits (375), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 79/229 (34%), Positives = 129/229 (56%), Gaps = 5/229 (2%)

Query: 17  RDEEES--VNGKVKEGDESPTAKRFKSERFPLTHWEFAAFVGVFLLFVTGLFCIYLTMPA 74
           R+ E S  V  + +   E+P  K  +S             V +F      ++ ++   P 
Sbjct: 9   RETESSPLVEQEPRPSKETPVPKGAQSPGGASARMSILLLVVIFACSACVMYLVFRNFPQ 68

Query: 75  ---ADYGKLKLPRTIADLRLLKDNLATYAQDYPVPFIIGYCSTYIFMQTFMIPGTIFMSL 131
               +  K+K+P+ + D + L   L+ Y   Y    ++ Y +TYIF+QTF IPG+IF+S+
Sbjct: 69  LSEDEREKIKIPKDMEDAKALGTVLSKYKDTYYTQVLLAYFATYIFLQTFAIPGSIFLSI 128

Query: 132 LAGALFGVIRGLILVVFNATAGASSCFFLSKLIGRPLVSWFWPEKLRFFQAEIAKRREKL 191
           L+G L+     L LV   +  GAS C+ LS L+GRP+V  +  E+ + +  ++ K RE L
Sbjct: 129 LSGYLYPFPLALFLVCLCSGLGASFCYMLSYLVGRPMVYKYLTERAQKWSQQVDKHREHL 188

Query: 192 LNYMLFLRITPSLPNLFINLASPIVDIPFHIFFLATLIGLIPASYITVR 240
           +NY++FLRITP LPN FIN+ SP++++P  +FFL T +G+ P S++ + 
Sbjct: 189 INYIIFLRITPFLPNWFINITSPVINVPLGVFFLGTFLGVAPPSFVAIN 237

Danio rerio (taxid: 7955)

>sp|Q5ZIL6|TM41B_CHICK Transmembrane protein 41B OS=Gallus gallus GN=TMEM41B PE=2 SV=1

 Score =  147 bits (371), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 73/189 (38%), Positives = 120/189 (63%), Gaps = 3/189 (1%)

Query: 55  VGVFLLFVTGLFCIYLTMP--AADYGK-LKLPRTIADLRLLKDNLATYAQDYPVPFIIGY 111
           V +F +    +F +Y   P  + + GK +K+PR + D + L   L+ Y   + V  ++ Y
Sbjct: 36  VSIFTIAAFLMFLVYKNFPQLSEEEGKCIKIPRDMDDAKALGKVLSKYKDTFYVQVLVAY 95

Query: 112 CSTYIFMQTFMIPGTIFMSLLAGALFGVIRGLILVVFNATAGASSCFFLSKLIGRPLVSW 171
            +TY+F+QTF IPG+IF+S+L+G L+     L LV   +  GAS C+ LS L+GRP+V  
Sbjct: 96  FATYVFLQTFAIPGSIFLSILSGFLYPFPLALFLVCLCSGLGASFCYMLSYLVGRPVVYK 155

Query: 172 FWPEKLRFFQAEIAKRREKLLNYMLFLRITPSLPNLFINLASPIVDIPFHIFFLATLIGL 231
           +  EK   +  ++ + RE L+NY++FLRITP LPN FIN+ SP++++P  +FF+ T +G+
Sbjct: 156 YLTEKAVKWSEQVERHREHLINYIIFLRITPFLPNWFINITSPVINVPLKVFFIGTFLGV 215

Query: 232 IPASYITVR 240
            P S++ ++
Sbjct: 216 APPSFVAIK 224

Gallus gallus (taxid: 9031)

>sp|Q5BJD5|TM41B_HUMAN Transmembrane protein 41B OS=Homo sapiens GN=TMEM41B PE=1 SV=1

 Score =  147 bits (370), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 73/189 (38%), Positives = 117/189 (61%), Gaps = 3/189 (1%)

Query: 55  VGVFLLFVTGLFCIYLTMPA---ADYGKLKLPRTIADLRLLKDNLATYAQDYPVPFIIGY 111
           V +FL     +F +Y   P     +   +K+PR + D + L   L+ Y   + V  ++ Y
Sbjct: 58  VSIFLSAAFVMFLVYKNFPQLSEEERVNMKVPRDMDDAKALGKVLSKYKDTFYVQVLVAY 117

Query: 112 CSTYIFMQTFMIPGTIFMSLLAGALFGVIRGLILVVFNATAGASSCFFLSKLIGRPLVSW 171
            +TYIF+QTF IPG+IF+S+L+G L+     L LV   +  GAS C+ LS L+GRP+V  
Sbjct: 118 FATYIFLQTFAIPGSIFLSILSGFLYPFPLALFLVCLCSGLGASFCYMLSYLVGRPVVYK 177

Query: 172 FWPEKLRFFQAEIAKRREKLLNYMLFLRITPSLPNLFINLASPIVDIPFHIFFLATLIGL 231
           +  EK   +  ++ + RE L+NY++FLRITP LPN FIN+ SP++++P  +FF+ T +G+
Sbjct: 178 YLTEKAVKWSQQVERHREHLINYIIFLRITPFLPNWFINITSPVINVPLKVFFIGTFLGV 237

Query: 232 IPASYITVR 240
            P S++ ++
Sbjct: 238 APPSFVAIK 246

Homo sapiens (taxid: 9606)

>sp|A4II98|TM41B_XENTR Transmembrane protein 41B OS=Xenopus tropicalis GN=tmem41b PE=2 SV=1

 Score =  146 bits (368), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 73/189 (38%), Positives = 118/189 (62%), Gaps = 3/189 (1%)

Query: 55  VGVFLLFVTGLFCIYLTMPA---ADYGKLKLPRTIADLRLLKDNLATYAQDYPVPFIIGY 111
           V +FL   + +F +Y   P     +  K+K+PR + D + L   L+ Y   + V  ++ Y
Sbjct: 45  VSIFLCAASIMFLVYKHFPQLSEEEREKIKVPRDMDDAKALGKVLSKYKDTFYVEVLVAY 104

Query: 112 CSTYIFMQTFMIPGTIFMSLLAGALFGVIRGLILVVFNATAGASSCFFLSKLIGRPLVSW 171
            +TYIF+QTF IPG+IF+S+L+G L+     L LV   +  GAS  + LS L+GRP+V  
Sbjct: 105 FTTYIFLQTFAIPGSIFLSILSGFLYPFPLALFLVCLCSGLGASFSYLLSYLVGRPVVYK 164

Query: 172 FWPEKLRFFQAEIAKRREKLLNYMLFLRITPSLPNLFINLASPIVDIPFHIFFLATLIGL 231
           +  +K   +  ++ + R+ L+NY++FLRITP LPN FIN+ SP++++P  +FFL T IG+
Sbjct: 165 YLSDKAIKWSQQVERHRDHLINYIIFLRITPFLPNWFINITSPVINVPLKVFFLGTFIGV 224

Query: 232 IPASYITVR 240
            P S++ ++
Sbjct: 225 APPSFVAIK 233

Xenopus tropicalis (taxid: 8364)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	251
224146389	262	predicted protein [Populus trichocarpa]	0.868	0.832	0.848	1e-105
224135539	262	predicted protein [Populus trichocarpa]	0.868	0.832	0.834	1e-104
255571746	254	conserved hypothetical protein [Ricinus	0.932	0.921	0.780	1e-104
30681121	287	SNARE associated Golgi protein [Arabidop	0.956	0.836	0.754	1e-104
356576151	271	PREDICTED: uncharacterized membrane prot	0.908	0.841	0.775	1e-102
225460728	279	PREDICTED: uncharacterized membrane prot	0.924	0.831	0.758	1e-100
449463384	270	PREDICTED: uncharacterized membrane prot	0.904	0.840	0.770	1e-100
297813383	294	hypothetical protein ARALYDRAFT_489810 [	0.956	0.816	0.721	2e-99
297839041	272	hypothetical protein ARALYDRAFT_476324 [	0.880	0.812	0.763	3e-99
449496849	270	PREDICTED: uncharacterized membrane prot	0.904	0.840	0.766	3e-99

>gi|224146389|ref|XP_002325990.1| predicted protein [Populus trichocarpa] gi|222862865|gb|EEF00372.1| predicted protein [Populus trichocarpa]

 Score =  385 bits (990), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 190/224 (84%), Positives = 205/224 (91%), Gaps = 6/224 (2%)

Query: 17  RDEEESVNGKVKEGDESPTAKRFKSERFPLTHWEFAAFVGVFLLFVTGLFCIYLTMPAAD 76
           RDEE     K KE D+SP+AKR K ERFPLT WE AA +GVF +F TGLFCIYLTMPAA+
Sbjct: 2   RDEE-----KAKE-DDSPSAKRAKFERFPLTRWELAAALGVFFVFSTGLFCIYLTMPAAE 55

Query: 77  YGKLKLPRTIADLRLLKDNLATYAQDYPVPFIIGYCSTYIFMQTFMIPGTIFMSLLAGAL 136
           YGKLKLPRTI+DLRLLKDNLATYA +YP  FI+GYCSTYIFMQTFMIPGTIFMSLLAGAL
Sbjct: 56  YGKLKLPRTISDLRLLKDNLATYANEYPAQFILGYCSTYIFMQTFMIPGTIFMSLLAGAL 115

Query: 137 FGVIRGLILVVFNATAGASSCFFLSKLIGRPLVSWFWPEKLRFFQAEIAKRREKLLNYML 196
           FGV+RG+ LVVFNATAGASSCFFLSKLIGRPLV+W WPEKLRFFQAEIAKRR+KLLNYML
Sbjct: 116 FGVVRGIFLVVFNATAGASSCFFLSKLIGRPLVNWLWPEKLRFFQAEIAKRRDKLLNYML 175

Query: 197 FLRITPSLPNLFINLASPIVDIPFHIFFLATLIGLIPASYITVR 240
           FLR+TP+LPNLFINLASPIVDIPFHIFFLATL+GLIPASYITVR
Sbjct: 176 FLRVTPTLPNLFINLASPIVDIPFHIFFLATLLGLIPASYITVR 219

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224135539|ref|XP_002327243.1| predicted protein [Populus trichocarpa] gi|222835613|gb|EEE74048.1| predicted protein [Populus trichocarpa]

 Score =  384 bits (986), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 187/224 (83%), Positives = 205/224 (91%), Gaps = 6/224 (2%)

Query: 17  RDEEESVNGKVKEGDESPTAKRFKSERFPLTHWEFAAFVGVFLLFVTGLFCIYLTMPAAD 76
           RDEE     K KE D+SP+AKR K ERFPLT WE AA +GVFL+F TGLFCIYLTMPAAD
Sbjct: 2   RDEE-----KAKE-DDSPSAKRSKFERFPLTRWELAAALGVFLVFSTGLFCIYLTMPAAD 55

Query: 77  YGKLKLPRTIADLRLLKDNLATYAQDYPVPFIIGYCSTYIFMQTFMIPGTIFMSLLAGAL 136
           YGKLKLPR+I+DLRLLKDNLATY  +YP  FI+GYCSTYIFMQTFMIPGTIFMSLLAGAL
Sbjct: 56  YGKLKLPRSISDLRLLKDNLATYVSEYPAQFILGYCSTYIFMQTFMIPGTIFMSLLAGAL 115

Query: 137 FGVIRGLILVVFNATAGASSCFFLSKLIGRPLVSWFWPEKLRFFQAEIAKRREKLLNYML 196
           FG++RGL LVVFNATAGASSCFFLSKLIGRPLV+W WPEK+RFFQ+EIAKR+EKLLNYML
Sbjct: 116 FGIVRGLFLVVFNATAGASSCFFLSKLIGRPLVNWLWPEKMRFFQSEIAKRKEKLLNYML 175

Query: 197 FLRITPSLPNLFINLASPIVDIPFHIFFLATLIGLIPASYITVR 240
           FLR+TP+LPNLFINLASPIVDIPFHIFFLATL+GLIPASYITV+
Sbjct: 176 FLRVTPTLPNLFINLASPIVDIPFHIFFLATLLGLIPASYITVK 219

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255571746|ref|XP_002526816.1| conserved hypothetical protein [Ricinus communis] gi|223533820|gb|EEF35551.1| conserved hypothetical protein [Ricinus communis]

 Score =  382 bits (982), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 189/242 (78%), Positives = 210/242 (86%), Gaps = 8/242 (3%)

Query: 1   MAAARNVAA--GDGSRVFRDEEESVNGKVKEGDESPTAKRFKSERFPLTHWEFAAFVGVF 58
           MAAARN+    G+     +DEE     K KE D+SP+AKR K ERFP T WEFAA +GVF
Sbjct: 1   MAAARNLTGEMGNNRSTMKDEE-----KAKE-DDSPSAKRLKFERFPFTRWEFAAAIGVF 54

Query: 59  LLFVTGLFCIYLTMPAADYGKLKLPRTIADLRLLKDNLATYAQDYPVPFIIGYCSTYIFM 118
            +F TGLFCIY+TMP + Y  LKLPRT++DLRLLKD+LATYA+DYP  FI+GYCSTYIFM
Sbjct: 55  FVFSTGLFCIYITMPISVYDNLKLPRTVSDLRLLKDHLATYAKDYPAQFILGYCSTYIFM 114

Query: 119 QTFMIPGTIFMSLLAGALFGVIRGLILVVFNATAGASSCFFLSKLIGRPLVSWFWPEKLR 178
           QTFMIPGTIFMSLLAGALFGV+RGL LVVFNATAGASSCFFLSKLIGRP+V+W WP+KLR
Sbjct: 115 QTFMIPGTIFMSLLAGALFGVVRGLFLVVFNATAGASSCFFLSKLIGRPIVNWLWPDKLR 174

Query: 179 FFQAEIAKRREKLLNYMLFLRITPSLPNLFINLASPIVDIPFHIFFLATLIGLIPASYIT 238
            FQAEIAKRREKLLNYMLFLRITP+LPNLFINLASPIVDIPFH+FFLATL+GLIPASYIT
Sbjct: 175 VFQAEIAKRREKLLNYMLFLRITPTLPNLFINLASPIVDIPFHVFFLATLLGLIPASYIT 234

Query: 239 VR 240
           VR
Sbjct: 235 VR 236

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|30681121|ref|NP_192696.3| SNARE associated Golgi protein [Arabidopsis thaliana] gi|75153817|sp|Q8L586.1|Y4958_ARATH RecName: Full=Uncharacterized membrane protein At4g09580 gi|20465630|gb|AAM20146.1| unknown protein [Arabidopsis thaliana] gi|21281237|gb|AAM45090.1| unknown protein [Arabidopsis thaliana] gi|332657367|gb|AEE82767.1| SNARE associated Golgi protein [Arabidopsis thaliana]

 Score =  382 bits (982), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 184/244 (75%), Positives = 210/244 (86%), Gaps = 4/244 (1%)

Query: 1   MAAARNVAAGDGSR-VFRDEEESVNGKVKEG---DESPTAKRFKSERFPLTHWEFAAFVG 56
           MAA RN+    G+R + +DEE        +G   D+SPT KR KSERFPL+ WEFA F  
Sbjct: 1   MAAPRNLTGDGGARQLVKDEESPAASSAAKGLLNDDSPTGKRTKSERFPLSRWEFAVFFT 60

Query: 57  VFLLFVTGLFCIYLTMPAADYGKLKLPRTIADLRLLKDNLATYAQDYPVPFIIGYCSTYI 116
           VFL+F TGLFCIYLTMPAA+YGKLK+PRTI+DLRLLK+NL +YA +Y   FI+GYCSTYI
Sbjct: 61  VFLVFTTGLFCIYLTMPAAEYGKLKVPRTISDLRLLKENLGSYASEYQARFILGYCSTYI 120

Query: 117 FMQTFMIPGTIFMSLLAGALFGVIRGLILVVFNATAGASSCFFLSKLIGRPLVSWFWPEK 176
           FMQTFMIPGTIFMSLLAGALFGV+RG +LVV NATAGA SCFFLSKL+GRPLV+W WPEK
Sbjct: 121 FMQTFMIPGTIFMSLLAGALFGVVRGFVLVVLNATAGACSCFFLSKLVGRPLVNWLWPEK 180

Query: 177 LRFFQAEIAKRREKLLNYMLFLRITPSLPNLFINLASPIVDIPFHIFFLATLIGLIPASY 236
           LRFFQAEIAKRR++LLNYMLFLRITP+LPNLFINL+SPIVDIPFH+FFLATL+GL+PASY
Sbjct: 181 LRFFQAEIAKRRDRLLNYMLFLRITPTLPNLFINLSSPIVDIPFHVFFLATLVGLMPASY 240

Query: 237 ITVR 240
           ITVR
Sbjct: 241 ITVR 244

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356576151|ref|XP_003556197.1| PREDICTED: uncharacterized membrane protein At4g09580-like [Glycine max]

 Score =  377 bits (968), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 186/240 (77%), Positives = 208/240 (86%), Gaps = 12/240 (5%)

Query: 1   MAAARNVAAGDGSRVFRDEEESVNGKVKEGDESPTAKRFKSERFPLTHWEFAAFVGVFLL 60
           MAA RNV A       RDEE+       E D+SP+AK+ KSERFPL  WEFA  V VFL+
Sbjct: 1   MAAPRNVTAT------RDEEKG------EDDDSPSAKKPKSERFPLNTWEFAVAVAVFLV 48

Query: 61  FVTGLFCIYLTMPAADYGKLKLPRTIADLRLLKDNLATYAQDYPVPFIIGYCSTYIFMQT 120
           F TGLFCIYLTMP+A Y  LKLPRT++DLRLLK++L+TYA ++P  FI+GYCSTYIFMQT
Sbjct: 49  FSTGLFCIYLTMPSAAYTNLKLPRTLSDLRLLKEHLSTYASNHPAQFILGYCSTYIFMQT 108

Query: 121 FMIPGTIFMSLLAGALFGVIRGLILVVFNATAGASSCFFLSKLIGRPLVSWFWPEKLRFF 180
           FMIPGTIFMSLLAGALFGV+RG++LVVFNATAGASSCFFLSKLIGRPLVSW WPEKLRFF
Sbjct: 109 FMIPGTIFMSLLAGALFGVVRGILLVVFNATAGASSCFFLSKLIGRPLVSWLWPEKLRFF 168

Query: 181 QAEIAKRREKLLNYMLFLRITPSLPNLFINLASPIVDIPFHIFFLATLIGLIPASYITVR 240
           QAEIAKRR++LLNYMLFLRITP+LPNLFINLASPIVD+PFHIFF ATLIGL+PASYITVR
Sbjct: 169 QAEIAKRRDRLLNYMLFLRITPTLPNLFINLASPIVDVPFHIFFSATLIGLVPASYITVR 228

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225460728|ref|XP_002271955.1| PREDICTED: uncharacterized membrane protein At4g09580 [Vitis vinifera] gi|296081147|emb|CBI18173.3| unnamed protein product [Vitis vinifera]

 Score =  370 bits (951), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 185/244 (75%), Positives = 206/244 (84%), Gaps = 12/244 (4%)

Query: 1   MAAARNVAAGDGSRVFRDEEESVNGKVKEGDESPTAKRFK----SERFPLTHWEFAAFVG 56
           MAA RN+   DG R+ RDEE +        D+SPT K+        RFPLT WEF   +G
Sbjct: 1   MAAPRNLG-NDGGRL-RDEENA------NEDDSPTTKKPAGVKIDGRFPLTRWEFTVALG 52

Query: 57  VFLLFVTGLFCIYLTMPAADYGKLKLPRTIADLRLLKDNLATYAQDYPVPFIIGYCSTYI 116
           VF+ F  GLFCIYLTMPAA+YG+++LPRTI+DLR+LKD LATYA DYP  FI+GYCSTYI
Sbjct: 53  VFVFFSIGLFCIYLTMPAAEYGRIRLPRTISDLRMLKDQLATYANDYPAQFIMGYCSTYI 112

Query: 117 FMQTFMIPGTIFMSLLAGALFGVIRGLILVVFNATAGASSCFFLSKLIGRPLVSWFWPEK 176
           FMQTFMIPGTIFMSLLAGALFGV+RGL LVVFNATAGASSC+FLSKLIGRPLV+W WPEK
Sbjct: 113 FMQTFMIPGTIFMSLLAGALFGVVRGLFLVVFNATAGASSCYFLSKLIGRPLVNWLWPEK 172

Query: 177 LRFFQAEIAKRREKLLNYMLFLRITPSLPNLFINLASPIVDIPFHIFFLATLIGLIPASY 236
           LR FQAEI+KRREKLLNYMLFLRITP+LPNLFINLASPIVDIPFH+FFLATL+GLIPASY
Sbjct: 173 LRLFQAEISKRREKLLNYMLFLRITPTLPNLFINLASPIVDIPFHVFFLATLVGLIPASY 232

Query: 237 ITVR 240
           ITVR
Sbjct: 233 ITVR 236

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449463384|ref|XP_004149414.1| PREDICTED: uncharacterized membrane protein At4g09580-like [Cucumis sativus]

 Score =  369 bits (948), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 185/240 (77%), Positives = 206/240 (85%), Gaps = 13/240 (5%)

Query: 1   MAAARNVAAGDGSRVFRDEEESVNGKVKEGDESPTAKRFKSERFPLTHWEFAAFVGVFLL 60
           MAA+RNV         RDEE     K+KE D+SPTAK+ K ERFPLT WE AA +G+FLL
Sbjct: 1   MAASRNVG-------MRDEE-----KLKE-DDSPTAKKPKFERFPLTKWELAAALGIFLL 47

Query: 61  FVTGLFCIYLTMPAADYGKLKLPRTIADLRLLKDNLATYAQDYPVPFIIGYCSTYIFMQT 120
             TGL C+YLTMP+A+Y  +KLPRT++DLR+LKD  A YA+D+P  FI+GYCSTYIFMQT
Sbjct: 48  CSTGLVCVYLTMPSAEYQSVKLPRTLSDLRVLKDLFANYAKDHPAQFILGYCSTYIFMQT 107

Query: 121 FMIPGTIFMSLLAGALFGVIRGLILVVFNATAGASSCFFLSKLIGRPLVSWFWPEKLRFF 180
           FMIPGTIFMSLLAGALFGVIRGL+LVVFNATAGASSCFFLSKLIGRPLV W WPEKL+ F
Sbjct: 108 FMIPGTIFMSLLAGALFGVIRGLLLVVFNATAGASSCFFLSKLIGRPLVYWMWPEKLKLF 167

Query: 181 QAEIAKRREKLLNYMLFLRITPSLPNLFINLASPIVDIPFHIFFLATLIGLIPASYITVR 240
           QAEIAK REKLLNYMLFLRITP+LPNLFINLASPIVDIPFH+FFLATLIGL+PASYITVR
Sbjct: 168 QAEIAKHREKLLNYMLFLRITPTLPNLFINLASPIVDIPFHVFFLATLIGLVPASYITVR 227

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297813383|ref|XP_002874575.1| hypothetical protein ARALYDRAFT_489810 [Arabidopsis lyrata subsp. lyrata] gi|297320412|gb|EFH50834.1| hypothetical protein ARALYDRAFT_489810 [Arabidopsis lyrata subsp. lyrata]

 Score =  367 bits (942), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 181/251 (72%), Positives = 208/251 (82%), Gaps = 11/251 (4%)

Query: 1   MAAARNVAAGDGS--------RVFRDEEESVNGKVKEG---DESPTAKRFKSERFPLTHW 49
           MAA RN+    G         ++ +DEE +      +G   D+S T KR KSERFPL+ W
Sbjct: 1   MAAPRNLTGDGGGRQLDGGGRQLVKDEESAAASSAAKGLLNDDSSTGKRTKSERFPLSRW 60

Query: 50  EFAAFVGVFLLFVTGLFCIYLTMPAADYGKLKLPRTIADLRLLKDNLATYAQDYPVPFII 109
           EFA F  VFL+F TGL CIYLTMPAA+YGKLK+PRTI+DLRLLK+NL +YA +Y   FI+
Sbjct: 61  EFAVFFTVFLVFTTGLLCIYLTMPAAEYGKLKVPRTISDLRLLKENLGSYASEYQARFIL 120

Query: 110 GYCSTYIFMQTFMIPGTIFMSLLAGALFGVIRGLILVVFNATAGASSCFFLSKLIGRPLV 169
           GYCSTYIFMQTFMIPGTIFMSLLAGALFGV+RG +LVV NATAGA SCFFLSKL+GRPLV
Sbjct: 121 GYCSTYIFMQTFMIPGTIFMSLLAGALFGVVRGFVLVVLNATAGACSCFFLSKLVGRPLV 180

Query: 170 SWFWPEKLRFFQAEIAKRREKLLNYMLFLRITPSLPNLFINLASPIVDIPFHIFFLATLI 229
           +W WPEKLRFFQAEIAKRR++LLNYMLFLRITP+LPNLFINL+SPIVDIPFH+FFLATL+
Sbjct: 181 NWLWPEKLRFFQAEIAKRRDRLLNYMLFLRITPTLPNLFINLSSPIVDIPFHVFFLATLV 240

Query: 230 GLIPASYITVR 240
           GL+PASYITVR
Sbjct: 241 GLMPASYITVR 251

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297839041|ref|XP_002887402.1| hypothetical protein ARALYDRAFT_476324 [Arabidopsis lyrata subsp. lyrata] gi|297333243|gb|EFH63661.1| hypothetical protein ARALYDRAFT_476324 [Arabidopsis lyrata subsp. lyrata]

 Score =  367 bits (941), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 171/224 (76%), Positives = 202/224 (90%), Gaps = 3/224 (1%)

Query: 17  RDEEESVNGKVKEGDESPTAKRFKSERFPLTHWEFAAFVGVFLLFVTGLFCIYLTMPAAD 76
           RDEE    G + + D+SP+ KR K +RFPL+ WE A  +GVFL+F +GL CIY+TMPAA+
Sbjct: 9   RDEEL---GVISDDDDSPSGKRSKLDRFPLSRWELAVSLGVFLVFSSGLCCIYMTMPAAE 65

Query: 77  YGKLKLPRTIADLRLLKDNLATYAQDYPVPFIIGYCSTYIFMQTFMIPGTIFMSLLAGAL 136
           +GKLKLPR+IADLRLLKDNLA YA +YP  F++GYC+TYIFMQTFMIPGTIFMSLLAGAL
Sbjct: 66  FGKLKLPRSIADLRLLKDNLANYANEYPAQFVLGYCATYIFMQTFMIPGTIFMSLLAGAL 125

Query: 137 FGVIRGLILVVFNATAGASSCFFLSKLIGRPLVSWFWPEKLRFFQAEIAKRREKLLNYML 196
           FGV +G++LVVFNATAGA+SCFFLSKLIGRPL++W WP+KLRFFQAEI+KRR+KLLNYML
Sbjct: 126 FGVFKGVVLVVFNATAGATSCFFLSKLIGRPLITWLWPDKLRFFQAEISKRRDKLLNYML 185

Query: 197 FLRITPSLPNLFINLASPIVDIPFHIFFLATLIGLIPASYITVR 240
           FLRITP+LPNLFINLASPIVD+PFH+FFLATLIGL+PA+YITVR
Sbjct: 186 FLRITPTLPNLFINLASPIVDVPFHVFFLATLIGLVPAAYITVR 229

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449496849|ref|XP_004160242.1| PREDICTED: uncharacterized membrane protein At4g09580-like [Cucumis sativus]

 Score =  367 bits (941), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 184/240 (76%), Positives = 205/240 (85%), Gaps = 13/240 (5%)

Query: 1   MAAARNVAAGDGSRVFRDEEESVNGKVKEGDESPTAKRFKSERFPLTHWEFAAFVGVFLL 60
           MAA+RNV         RDEE     K+KE D+SPTAK+ K ERFPLT WE AA +G+FLL
Sbjct: 1   MAASRNVG-------MRDEE-----KLKE-DDSPTAKKPKFERFPLTKWELAAALGIFLL 47

Query: 61  FVTGLFCIYLTMPAADYGKLKLPRTIADLRLLKDNLATYAQDYPVPFIIGYCSTYIFMQT 120
             TGL C+YLTMP+A+Y  +KLPRT++DLR+LKD  A YA+ +P  FI+GYCSTYIFMQT
Sbjct: 48  CSTGLVCVYLTMPSAEYQSVKLPRTLSDLRVLKDLFANYAKSHPAQFILGYCSTYIFMQT 107

Query: 121 FMIPGTIFMSLLAGALFGVIRGLILVVFNATAGASSCFFLSKLIGRPLVSWFWPEKLRFF 180
           FMIPGTIFMSLLAGALFGVIRGL+LVVFNATAGASSCFFLSKLIGRPLV W WPEKL+ F
Sbjct: 108 FMIPGTIFMSLLAGALFGVIRGLLLVVFNATAGASSCFFLSKLIGRPLVYWMWPEKLKLF 167

Query: 181 QAEIAKRREKLLNYMLFLRITPSLPNLFINLASPIVDIPFHIFFLATLIGLIPASYITVR 240
           QAEIAK REKLLNYMLFLRITP+LPNLFINLASPIVDIPFH+FFLATLIGL+PASYITVR
Sbjct: 168 QAEIAKHREKLLNYMLFLRITPTLPNLFINLASPIVDIPFHVFFLATLIGLVPASYITVR 227

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	251
TAIR|locus:2136927	287	AT4G09580 "AT4G09580" [Arabido	0.956	0.836	0.709	1.2e-90
TAIR|locus:2129485	264	AT4G17790 "AT4G17790" [Arabido	0.784	0.746	0.624	2.4e-67
DICTYBASE|DDB_G0275543	334	DDB_G0275543 "Transmembrane pr	0.641	0.482	0.453	1.2e-35
FB|FBgn0030850	320	stas "Stasimon" [Drosophila me	0.689	0.540	0.421	1.3e-34
UNIPROTKB|Q5ZIL6	269	TMEM41B "Transmembrane protein	0.689	0.643	0.397	1.7e-34
ZFIN|ZDB-GENE-061215-138	282	tmem41b "transmembrane protein	0.641	0.570	0.422	1.7e-34
UNIPROTKB|Q5BJD5	291	TMEM41B "Transmembrane protein	0.641	0.553	0.416	7.4e-34
MGI|MGI:1289225	291	Tmem41b "transmembrane protein	0.641	0.553	0.416	7.4e-34
RGD|1310870	291	Tmem41b "transmembrane protein	0.641	0.553	0.416	7.4e-34
ZFIN|ZDB-GENE-050522-53	281	tmem41aa "transmembrane protei	0.645	0.576	0.376	2.3e-31

TAIR|locus:2136927 AT4G09580 "AT4G09580" [Arabidopsis thaliana (taxid:3702)]

 Score = 904 (323.3 bits), Expect = 1.2e-90, P = 1.2e-90
 Identities = 173/244 (70%), Positives = 198/244 (81%)

Query:     1 MAAARNVAAGDGSR-VFRDEEESVNGKVKEG---DESPTAKRFKSERFPLTHWEXXXXXX 56
             MAA RN+    G+R + +DEE        +G   D+SPT KR KSERFPL+ WE      
Sbjct:     1 MAAPRNLTGDGGARQLVKDEESPAASSAAKGLLNDDSPTGKRTKSERFPLSRWEFAVFFT 60

Query:    57 XXXXXXXXXXCIYLTMPAADYGKLKLPRTIADLRLLKDNLATYAQDYPVPFIIGYCSTYI 116
                       CIYLTMPAA+YGKLK+PRTI+DLRLLK+NL +YA +Y   FI+GYCSTYI
Sbjct:    61 VFLVFTTGLFCIYLTMPAAEYGKLKVPRTISDLRLLKENLGSYASEYQARFILGYCSTYI 120

Query:   117 FMQTFMIPGTIFMSLLAGALFGVIRGLILVVFNATAGASSCFFLSKLIGRPLVSWFWPEK 176
             FMQTFMIPGTIFMSLLAGALFGV+RG +LVV NATAGA SCFFLSKL+GRPLV+W WPEK
Sbjct:   121 FMQTFMIPGTIFMSLLAGALFGVVRGFVLVVLNATAGACSCFFLSKLVGRPLVNWLWPEK 180

Query:   177 LRFFQAEIAKRREKLLNYMLFLRITPSLPNLFINLASPIVDIPFHIFFLATLIGLIPASY 236
             LRFFQAEIAKRR++LLNYMLFLRITP+LPNLFINL+SPIVDIPFH+FFLATL+GL+PASY
Sbjct:   181 LRFFQAEIAKRRDRLLNYMLFLRITPTLPNLFINLSSPIVDIPFHVFFLATLVGLMPASY 240

Query:   237 ITVR 240
             ITVR
Sbjct:   241 ITVR 244

GO:0008150 "biological_process" evidence=ND

GO:0005783 "endoplasmic reticulum" evidence=IDA

TAIR|locus:2129485 AT4G17790 "AT4G17790" [Arabidopsis thaliana (taxid:3702)]

 Score = 684 (245.8 bits), Expect = 2.4e-67, P = 2.4e-67
 Identities = 123/197 (62%), Positives = 155/197 (78%)

Query:    44 FPLTHWEXXXXXXXXXXXXXXXXCIYLTMPAADYGKLKLPRTIADLRLLKDNLATYAQDY 103
             + L+ WE                C+YLTMP +DY  LKLPR + DL++L+DNL  Y  DY
Sbjct:    27 YSLSFWEVTAASGVVLGFILGLVCVYLTMPQSDYSFLKLPRNLEDLQILRDNLEIYTSDY 86

Query:   104 PVPFIIGYCSTYIFMQTFMIPGTIFMSLLAGALFGVIRGLILVVFNATAGASSCFFLSKL 163
              V  ++GYC  Y+FMQTFMIPGT+FMSLLAGALFGV++G+ LVV  ATAGASSC+FLSKL
Sbjct:    87 TVQVLVGYCLVYVFMQTFMIPGTVFMSLLAGALFGVVKGMALVVSTATAGASSCYFLSKL 146

Query:   164 IGRPLVSWFWPEKLRFFQAEIAKRREKLLNYMLFLRITPSLPNLFINLASPIVDIPFHIF 223
             IGRPL+   WP+KL FFQ ++A+R+++LLNYMLFLR+TP+LPN FIN+ASPIVD+P+HIF
Sbjct:   147 IGRPLLFSLWPDKLVFFQDQVARRKDRLLNYMLFLRLTPTLPNTFINVASPIVDVPYHIF 206

Query:   224 FLATLIGLIPASYITVR 240
             FLAT IGLIPA+++TVR
Sbjct:   207 FLATFIGLIPAAFVTVR 223

GO:0008150 "biological_process" evidence=ND

GO:0006661 "phosphatidylinositol biosynthetic process" evidence=RCA

DICTYBASE|DDB_G0275543 DDB_G0275543 "Transmembrane protein 41B" [Dictyostelium discoideum (taxid:44689)]

 Score = 385 (140.6 bits), Expect = 1.2e-35, P = 1.2e-35
 Identities = 73/161 (45%), Positives = 109/161 (67%)

Query:    80 LKLPRTIADLRLLKDNLATYAQDYPVPFIIGYCSTYIFMQTFMIPGTIFMSLLAGALFGV 139
             ++LP+   D++LL D L+ Y  D     I  +   Y F+Q F IPG++F+S L+G LFG+
Sbjct:   131 IRLPKNFKDVKLLSDILSQYTDDNYFIVITTFGVIYTFLQAFSIPGSVFLSFLSGGLFGL 190

Query:   140 IRGLILVVFNATAGASSCFFLSKLIGRPLVSWFWPEKLRFFQAEIAKRREKLLNYMLFLR 199
               G  LV F AT GA+  + +S  IGR LV   +P+KL+ F   ++++R+ LLNY++FLR
Sbjct:   191 KVGFPLVCFVATLGATFSYLISYYIGRNLVRKLFPDKLKLFSDSLSQKRDNLLNYIVFLR 250

Query:   200 ITPSLPNLFINLASPIVDIPFHIFFLATLIGLIPASYITVR 240
             ITP LPN FINLASP++D+P H F + T IG++PA+++ V+
Sbjct:   251 ITPFLPNWFINLASPLLDVPIHTFAIGTFIGIMPATFLAVK 291

GO:0016021 "integral to membrane" evidence=IEA

GO:0016020 "membrane" evidence=IEA

FB|FBgn0030850 stas "Stasimon" [Drosophila melanogaster (taxid:7227)]

 Score = 375 (137.1 bits), Expect = 1.3e-34, P = 1.3e-34
 Identities = 73/173 (42%), Positives = 106/173 (61%)

Query:    68 IYLTMPAADYGKLKLPRTIADLRLLKDNLATYAQDYPVPFIIGYCSTYIFMQTFMIPGTI 127
             I+  + A++   LK+PR I D ++L   L  Y   Y    + G    Y+F+QTF IPG++
Sbjct:   102 IFPELNASEKQHLKIPRDIQDAKMLAKVLDRYKDMYYFEVMFGVVVAYVFLQTFAIPGSL 161

Query:   128 FMSLLAGALFGVIRGLILVVFNATAGASSCFFLSKLIGRPLVSWFWPEKLRFFQAEIAKR 187
             F+S+L G L+     L L+ F +  GA+ C+ LS L+GR L+  FWP+K   +   + + 
Sbjct:   162 FLSILLGFLYKFPIALFLICFCSALGATLCYTLSNLVGRRLIRHFWPKKTSEWSKHVEEY 221

Query:   188 REKLLNYMLFLRITPSLPNLFINLASPIVDIPFHIFFLATLIGLIPASYITVR 240
             R+ L NYMLFLR+TP LPN FINLASP++ +P HIF L T  G+ P S I ++
Sbjct:   222 RDSLFNYMLFLRMTPILPNWFINLASPVIGVPLHIFALGTFCGVAPPSVIAIQ 274

GO:0005575 "cellular_component" evidence=ND

GO:0003674 "molecular_function" evidence=ND

GO:0032224 "positive regulation of synaptic transmission, cholinergic" evidence=IMP

UNIPROTKB|Q5ZIL6 TMEM41B "Transmembrane protein 41B" [Gallus gallus (taxid:9031)]

 Score = 374 (136.7 bits), Expect = 1.7e-34, P = 1.7e-34
 Identities = 70/176 (39%), Positives = 114/176 (64%)

Query:    68 IYLTMP--AADYGK-LKLPRTIADLRLLKDNLATYAQDYPVPFIIGYCSTYIFMQTFMIP 124
             +Y   P  + + GK +K+PR + D + L   L+ Y   + V  ++ Y +TY+F+QTF IP
Sbjct:    49 VYKNFPQLSEEEGKCIKIPRDMDDAKALGKVLSKYKDTFYVQVLVAYFATYVFLQTFAIP 108

Query:   125 GTIFMSLLAGALFGVIRGLILVVFNATAGASSCFFLSKLIGRPLVSWFWPEKLRFFQAEI 184
             G+IF+S+L+G L+     L LV   +  GAS C+ LS L+GRP+V  +  EK   +  ++
Sbjct:   109 GSIFLSILSGFLYPFPLALFLVCLCSGLGASFCYMLSYLVGRPVVYKYLTEKAVKWSEQV 168

Query:   185 AKRREKLLNYMLFLRITPSLPNLFINLASPIVDIPFHIFFLATLIGLIPASYITVR 240
              + RE L+NY++FLRITP LPN FIN+ SP++++P  +FF+ T +G+ P S++ ++
Sbjct:   169 ERHREHLINYIIFLRITPFLPNWFINITSPVINVPLKVFFIGTFLGVAPPSFVAIK 224

GO:0016021 "integral to membrane" evidence=IEA

ZFIN|ZDB-GENE-061215-138 tmem41b "transmembrane protein 41B" [Danio rerio (taxid:7955)]

 Score = 374 (136.7 bits), Expect = 1.7e-34, P = 1.7e-34
 Identities = 68/161 (42%), Positives = 107/161 (66%)

Query:    79 KLKLPRTIADLRLLKDNLATYAQDYPVPFIIGYCSTYIFMQTFMIPGTIFMSLLAGALFG 138
             K+K+P+ + D + L   L+ Y   Y    ++ Y +TYIF+QTF IPG+IF+S+L+G L+ 
Sbjct:    76 KIKIPKDMEDAKALGTVLSKYKDTYYTQVLLAYFATYIFLQTFAIPGSIFLSILSGYLYP 135

Query:   139 VIRGLILVVFNATAGASSCFFLSKLIGRPLVSWFWPEKLRFFQAEIAKRREKLLNYMLFL 198
                 L LV   +  GAS C+ LS L+GRP+V  +  E+ + +  ++ K RE L+NY++FL
Sbjct:   136 FPLALFLVCLCSGLGASFCYMLSYLVGRPMVYKYLTERAQKWSQQVDKHREHLINYIIFL 195

Query:   199 RITPSLPNLFINLASPIVDIPFHIFFLATLIGLIPASYITV 239
             RITP LPN FIN+ SP++++P  +FFL T +G+ P S++ +
Sbjct:   196 RITPFLPNWFINITSPVINVPLGVFFLGTFLGVAPPSFVAI 236

GO:0003674 "molecular_function" evidence=ND

GO:0008045 "motor neuron axon guidance" evidence=IMP

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|Q5BJD5 TMEM41B "Transmembrane protein 41B" [Homo sapiens (taxid:9606)]

 Score = 368 (134.6 bits), Expect = 7.4e-34, P = 7.4e-34
 Identities = 67/161 (41%), Positives = 107/161 (66%)

Query:    80 LKLPRTIADLRLLKDNLATYAQDYPVPFIIGYCSTYIFMQTFMIPGTIFMSLLAGALFGV 139
             +K+PR + D + L   L+ Y   + V  ++ Y +TYIF+QTF IPG+IF+S+L+G L+  
Sbjct:    86 MKVPRDMDDAKALGKVLSKYKDTFYVQVLVAYFATYIFLQTFAIPGSIFLSILSGFLYPF 145

Query:   140 IRGLILVVFNATAGASSCFFLSKLIGRPLVSWFWPEKLRFFQAEIAKRREKLLNYMLFLR 199
                L LV   +  GAS C+ LS L+GRP+V  +  EK   +  ++ + RE L+NY++FLR
Sbjct:   146 PLALFLVCLCSGLGASFCYMLSYLVGRPVVYKYLTEKAVKWSQQVERHREHLINYIIFLR 205

Query:   200 ITPSLPNLFINLASPIVDIPFHIFFLATLIGLIPASYITVR 240
             ITP LPN FIN+ SP++++P  +FF+ T +G+ P S++ ++
Sbjct:   206 ITPFLPNWFINITSPVINVPLKVFFIGTFLGVAPPSFVAIK 246

GO:0016021 "integral to membrane" evidence=IEA

MGI|MGI:1289225 Tmem41b "transmembrane protein 41B" [Mus musculus (taxid:10090)]

 Score = 368 (134.6 bits), Expect = 7.4e-34, P = 7.4e-34
 Identities = 67/161 (41%), Positives = 107/161 (66%)

Query:    80 LKLPRTIADLRLLKDNLATYAQDYPVPFIIGYCSTYIFMQTFMIPGTIFMSLLAGALFGV 139
             +K+PR + D + L   L+ Y   + V  ++ Y +TYIF+QTF IPG+IF+S+L+G L+  
Sbjct:    86 MKVPRDMDDAKALGKVLSKYKDTFYVQVLVAYFATYIFLQTFAIPGSIFLSILSGFLYPF 145

Query:   140 IRGLILVVFNATAGASSCFFLSKLIGRPLVSWFWPEKLRFFQAEIAKRREKLLNYMLFLR 199
                L LV   +  GAS C+ LS L+GRP+V  +  EK   +  ++ + RE L+NY++FLR
Sbjct:   146 PLALFLVCLCSGLGASFCYMLSYLVGRPVVYKYLTEKAVKWSQQVERHREHLINYIIFLR 205

Query:   200 ITPSLPNLFINLASPIVDIPFHIFFLATLIGLIPASYITVR 240
             ITP LPN FIN+ SP++++P  +FF+ T +G+ P S++ ++
Sbjct:   206 ITPFLPNWFINITSPVINVPLKVFFIGTFLGVAPPSFVAIK 246

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

RGD|1310870 Tmem41b "transmembrane protein 41B" [Rattus norvegicus (taxid:10116)]

 Score = 368 (134.6 bits), Expect = 7.4e-34, P = 7.4e-34
 Identities = 67/161 (41%), Positives = 107/161 (66%)

Query:    80 LKLPRTIADLRLLKDNLATYAQDYPVPFIIGYCSTYIFMQTFMIPGTIFMSLLAGALFGV 139
             +K+PR + D + L   L+ Y   + V  ++ Y +TYIF+QTF IPG+IF+S+L+G L+  
Sbjct:    86 MKVPRDMDDAKALGKVLSKYKDTFYVQVLVAYFATYIFLQTFAIPGSIFLSILSGFLYPF 145

Query:   140 IRGLILVVFNATAGASSCFFLSKLIGRPLVSWFWPEKLRFFQAEIAKRREKLLNYMLFLR 199
                L LV   +  GAS C+ LS L+GRP+V  +  EK   +  ++ + RE L+NY++FLR
Sbjct:   146 PLALFLVCLCSGLGASFCYMLSYLVGRPVVYKYLTEKAVKWSQQVERHREHLINYIIFLR 205

Query:   200 ITPSLPNLFINLASPIVDIPFHIFFLATLIGLIPASYITVR 240
             ITP LPN FIN+ SP++++P  +FF+ T +G+ P S++ ++
Sbjct:   206 ITPFLPNWFINITSPVINVPLKVFFIGTFLGVAPPSFVAIK 246

GO:0016021 "integral to membrane" evidence=IEA

ZFIN|ZDB-GENE-050522-53 tmem41aa "transmembrane protein 41aa" [Danio rerio (taxid:7955)]

 Score = 323 (118.8 bits), Expect = 2.3e-31, Sum P(2) = 2.3e-31
 Identities = 61/162 (37%), Positives = 101/162 (62%)

Query:    79 KLKLPRTIADLRLLKDNLATYAQDYPVPFIIGYCSTYIFMQTFMIPGTIFMSLLAGALFG 138
             +LK P  + +L+ + + L  Y  ++    ++ +CS Y++ Q F IPG+ F+++LAGALFG
Sbjct:    58 RLKFPSDLDELKEMAELLQFYKTEHTGYVLLLFCSAYLYKQAFAIPGSSFLNILAGALFG 117

Query:   139 VIRGLILVVFNATAGASSCFFLSKLIGRPLVSWFWPEKLRFFQAEIAKRREKLLNYMLFL 198
                GL+L     T GA+ CF LS+  G+  +   +P+K+   Q ++ + R  L  ++LFL
Sbjct:   118 TWFGLLLTCVLTTVGATLCFLLSQAFGKHHIVKLFPDKVAMLQKKVEENRSSLFFFLLFL 177

Query:   199 RITPSLPNLFINLASPIVDIPFHIFFLATLIGLIPASYITVR 240
             R  P  PN F+N+ SPI++IP  +FF+A  IGL+P ++I V+
Sbjct:   178 RFFPMSPNWFLNMTSPILNIPVTLFFMAVFIGLMPYNFICVQ 219

GO:0003674 "molecular_function" evidence=ND

GO:0016021 "integral to membrane" evidence=IEA

GO:0016020 "membrane" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q8L586	Y4958_ARATH	No assigned EC number	0.7540	0.9561	0.8362	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: estExt_fgenesh4_pm.C_LG_XIX0222 hypothetical protein (262 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	251
COG0398	223	COG0398, COG0398, Uncharacterized conserved protei	1e-14
pfam09335	123	pfam09335, SNARE_assoc, SNARE associated Golgi pro	1e-12

>gnl|CDD|223475 COG0398, COG0398, Uncharacterized conserved protein [Function unknown]

 Score = 70.4 bits (173), Expect = 1e-14
 Identities = 44/156 (28%), Positives = 72/156 (46%), Gaps = 3/156 (1%)

Query: 85  TIADLRLLKDNLATYAQDYPVPF-IIGYCSTYIFMQTFMIPGTIFMSLLAGALFGVIRGL 143
            +  L L  + L  + Q Y     ++ +   Y+     +IPG+I  +L  G LFG   G 
Sbjct: 27  GLLVLLLDPETLREWIQAYGALGPLVFFILLYLVATLPIIPGSIL-TLAGGLLFGPFLGF 85

Query: 144 ILVVFNATAGASSCFFLSKLIGRPLVSWFWPEKLRFFQAEIAKRREKLLNYMLFLRITPS 203
           +  +  ATAG++  F L++ +GR  V  F   K +  Q   A         +L LR+ P 
Sbjct: 86  LYSLIGATAGSTLAFLLARYLGRDWVLKFVGGKEKV-QRIDAGLERNGFWAILLLRLIPI 144

Query: 204 LPNLFINLASPIVDIPFHIFFLATLIGLIPASYITV 239
            P   +N A+ +  I F  F +ATL+G +P + +  
Sbjct: 145 FPFDLVNYAAGLTGISFRDFAIATLLGKLPGTIVYT 180

Length = 223

>gnl|CDD|220186 pfam09335, SNARE_assoc, SNARE associated Golgi protein

 Score = 63.1 bits (154), Expect = 1e-12
 Identities = 29/119 (24%), Positives = 55/119 (46%), Gaps = 3/119 (2%)

Query: 123 IPGTIFMSLLAGALFGVIRGLILVVFNATAGASSCFFLSKLIGRPLV--SWFWPEKLRFF 180
           +PGT+ + + AGALFG   G ++ +  A  G+   + L + +GR  +       +  +  
Sbjct: 1   LPGTVLL-IAAGALFGPWLGFLVALLGALLGSLLAYLLGRYLGRRALRRRLLKEKAFQRL 59

Query: 181 QAEIAKRREKLLNYMLFLRITPSLPNLFINLASPIVDIPFHIFFLATLIGLIPASYITV 239
           Q             +L LR+ P +P   +N  + +  + F  F L T +G++P + + V
Sbjct: 60  QRVERLVERYGFKALLLLRLLPGVPRDLVNYVAGLSRVSFRRFLLGTFLGILPWALLYV 118

This is a family of SNARE associated Golgi proteins. The yeast member of this family localises with the t-SNARE Tlg2. Length = 123

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	251
KOG3140	275	consensus Predicted membrane protein [Function unk	99.96
COG0398	223	Uncharacterized conserved protein [Function unknow	99.96
PF09335	123	SNARE_assoc: SNARE associated Golgi protein; Inter	99.87
PRK10847	219	hypothetical protein; Provisional	99.8
COG0586	208	DedA Uncharacterized membrane-associated protein [	99.8
COG1238	161	Predicted membrane protein [Function unknown]	99.4
PF06695	121	Sm_multidrug_ex: Putative small multi-drug export	96.11
PLN02953	403	phosphatidate cytidylyltransferase	90.96
PRK11677	134	hypothetical protein; Provisional	84.44
TIGR02359	160	thiW thiW protein. Levels of thiamine pyrophosphat	83.48
PRK01844	72	hypothetical protein; Provisional	82.26
PF06695	121	Sm_multidrug_ex: Putative small multi-drug export	80.86

>KOG3140 consensus Predicted membrane protein [Function unknown]

Probab=99.96  E-value=4.1e-29  Score=223.75  Aligned_cols=217  Identities=46%  Similarity=0.832  Sum_probs=202.8

Q ss_pred             CChhhhcccCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHcCcc-cccccccCCcHHHHHHHHHHHHHhHHhCChhHHHH
Q 025527           32 ESPTAKRFKSERFPLTHWEFAAFVGVFLLFVTGLFCIYLTMPAA-DYGKLKLPRTIADLRLLKDNLATYAQDYPVPFIIG  110 (251)
Q Consensus        32 ~~~~~~~~~~~~~~l~~w~~~~~~~~~~~~~~~l~~~~~~~P~~-~~~~~~lp~~l~dl~~l~~~l~~~~~~~~~~~~l~  110 (251)
                      .++...+.++++.....|+....+++|.....++++.|..+|.. |.+.+++|++++|.+.+.+.+++|.+++.....++
T Consensus        20 ~~~~~~~~~~~~~~~~~~~~~~~l~if~~~~~~l~~i~~s~~~~~~~~~l~lp~~i~~~~~L~~vl~~y~~~~~a~~~~~   99 (275)
T KOG3140|consen   20 GQRAGQFLKKDELLLSLMSIAERLGIFLSFSLVLVYIYLSAPALSELGVLKLPRDILDLRGLGAVLRKYKATYFAAVLLG   99 (275)
T ss_pred             chhhhhhcchhhhhhhhccHHHHHHHhhHHHHHHHHHHHcccCccccccccccchhHHHHHHHHHHHHHHhhhHHHHHHH
Confidence            44444445556777788888888889999999999999999988 58889999999999999999999999999999999


Q ss_pred             HHHHHHhhhccccChHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcHHHHhhhhhhhHHHHHHHHHHhccc
Q 025527          111 YCSTYIFMQTFMIPGTIFMSLLAGALFGVIRGLILVVFNATAGASSCFFLSKLIGRPLVSWFWPEKLRFFQAEIAKRREK  190 (251)
Q Consensus       111 fi~~~i~~~~~~iPg~~~L~l~aG~lfG~~~G~l~~~lgs~lGa~i~y~lgR~lGr~~~~~~~~~~l~~~~~~l~~~~~~  190 (251)
                      |++.|++.|++++||..++++.+|++||++.|+++++.++++|+++||++++.+||+.+.++++++...++..+++++++
T Consensus       100 ~~~~y~f~qtfaipG~~fls~~aG~l~~~~~g~~Lv~~~~~~ga~~cy~lS~~f~r~~v~~l~p~~~~~~~~~~~~~~~~  179 (275)
T KOG3140|consen  100 FIAAYVFLQTFAIPGSIFLSLLAGALFGVFKGVLLVCLLSTLGASLCYLLSKLFGRPLVLKLFPDKIAFLQQDVELNRNS  179 (275)
T ss_pred             HHHHHHHHHhcccccHHHHHHHHHHhhccceEEeeeeeccchhHHHHHHHHHHHhHHHHHHHhHHHHHHHHHHHHhcccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999888


Q ss_pred             hHHHHHHhhcccccchhhhhHhhhccCCChhHHHHHHHHhHHHHHHHHHHHHHHHHHH
Q 025527          191 LLNYMLFLRITPSLPNLFINLASPIVDIPFHIFFLATLIGLIPASYITVRPRRCVILV  248 (251)
Q Consensus       191 ~~~~vl~~Rl~P~iP~~lvn~~aGi~~v~~~~F~l~t~iG~lP~~~l~~~~G~~l~~~  248 (251)
                      .+.++++.|++|+.|++++|+++++.+++++.|++++++|.+|.+++++..|+.+++.
T Consensus       180 ~~~~~~~lrlsp~~pnw~~n~~spvl~Vp~~~f~~~~~~gl~p~s~i~v~ags~l~~l  237 (275)
T KOG3140|consen  180 LLNYMLFLRLSPFLPNWVINIVSPVLGVPLRIFFIGTFKGLIPYSFIEVRAGSTLASL  237 (275)
T ss_pred             hhhhhhhhhhccCCHHHHHHHHHHhhccchHHHHHHHHHhcCchHHHHhhccchHhhh
Confidence            8999999999999999999999999999999999999999999999999999988764

>COG0398 Uncharacterized conserved protein [Function unknown]

Probab=99.96  E-value=3.3e-27  Score=206.94  Aligned_cols=150  Identities=28%  Similarity=0.473  Sum_probs=134.7

Q ss_pred             HHHHHHHHHHHHhHHhCChhHHHH-HHHHHHhhhccccChHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhc
Q 025527           87 ADLRLLKDNLATYAQDYPVPFIIG-YCSTYIFMQTFMIPGTIFMSLLAGALFGVIRGLILVVFNATAGASSCFFLSKLIG  165 (251)
Q Consensus        87 ~dl~~l~~~l~~~~~~~~~~~~l~-fi~~~i~~~~~~iPg~~~L~l~aG~lfG~~~G~l~~~lgs~lGa~i~y~lgR~lG  165 (251)
                      .+.+++++++++++..    ++++ |++.++.....++|+++ +++++|++||+++|++++++|+++|++++|+++|++|
T Consensus        33 ~~~~~l~~~i~~~g~~----~pl~~fil~~l~~~~~~iP~~i-l~l~~g~ifG~~~G~~~s~~G~~~gs~~~Fll~R~~g  107 (223)
T COG0398          33 LDPETLREWIQAYGAL----GPLVFFILLYLVATLPIIPGSI-LTLAGGLLFGPFLGFLYSLIGATAGSTLAFLLARYLG  107 (223)
T ss_pred             cCHHHHHHHHHHcCch----HHHHHHHHHHHHHHHhcCcHHH-HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            4577778888776654    4555 77777778888899997 7999999999999999999999999999999999999


Q ss_pred             HHHHhhhhh--hhHHHHHHHHHHhccchHHHHHHhhcccccchhhhhHhhhccCCChhHHHHHHHHhHHHHHHHHHHHHH
Q 025527          166 RPLVSWFWP--EKLRFFQAEIAKRREKLLNYMLFLRITPSLPNLFINLASPIVDIPFHIFFLATLIGLIPASYITVRPRR  243 (251)
Q Consensus       166 r~~~~~~~~--~~l~~~~~~l~~~~~~~~~~vl~~Rl~P~iP~~lvn~~aGi~~v~~~~F~l~t~iG~lP~~~l~~~~G~  243 (251)
                      |+..+++.+  ++.+++++.++++   ++..++++|++|++|++++||+||++++++++|.++|.+|++|++++|+++|+
T Consensus       108 r~~~~~~~~~~~~~~~~~~~~~~~---g~~~i~~lrl~P~~P~~lvn~aaglt~is~~~f~ias~lG~~P~~i~y~~~G~  184 (223)
T COG0398         108 RDWVLKFVGGKEKVQRIDAGLERN---GFWAILLLRLIPIFPFDLVNYAAGLTGISFRDFAIATLLGKLPGTIVYTYLGS  184 (223)
T ss_pred             HHHHHHHhcccHHHHHHHHHHHhC---ChHHHHHHHHhhcCCHHHHHHHHhccCCcHHHHHHHHHHhcccHHHHHHHHHH
Confidence            999988775  5788999999986   58999999999999999999999999999999999999999999999999996


Q ss_pred             H
Q 025527          244 C  244 (251)
Q Consensus       244 ~  244 (251)
                      .
T Consensus       185 ~  185 (223)
T COG0398         185 A  185 (223)
T ss_pred             H
Confidence            3

>PF09335 SNARE_assoc: SNARE associated Golgi protein; InterPro: IPR015414 This is a entry contains SNARE associated Golgi proteins

Probab=99.87  E-value=5.1e-21  Score=150.91  Aligned_cols=117  Identities=29%  Similarity=0.498  Sum_probs=103.0

Q ss_pred             cChHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcHHHHhhhh-h-hhHHH---HHHHHHHhccchHHHHHH
Q 025527          123 IPGTIFMSLLAGALFGVIRGLILVVFNATAGASSCFFLSKLIGRPLVSWFW-P-EKLRF---FQAEIAKRREKLLNYMLF  197 (251)
Q Consensus       123 iPg~~~L~l~aG~lfG~~~G~l~~~lgs~lGa~i~y~lgR~lGr~~~~~~~-~-~~l~~---~~~~l~~~~~~~~~~vl~  197 (251)
                      +|+++ +.+++|+++|++.+++++++|+++|+.++|+++|+++++..++.. + ++.++   .++.++|+   ++..+++
T Consensus         1 iP~~~-~~~~~g~~~g~~~~~~~~~~g~~~g~~~~y~lgr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---g~~~l~~   76 (123)
T PF09335_consen    1 IPGSI-LLIAAGALFGPWLGFLIATLGAVLGSLLAYLLGRYFGRRRLRRKLRKKKRIKRIERIERWFQKY---GFWVLFL   76 (123)
T ss_pred             CChHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchHHHHHHHHHHHHHhhh---hHHHHHH
Confidence            69988 479999999999999999999999999999999999965554433 2 33444   66666664   6889999


Q ss_pred             hhcccccchhhhhHhhhccCCChhHHHHHHHHhHHHHHHHHHHHHH
Q 025527          198 LRITPSLPNLFINLASPIVDIPFHIFFLATLIGLIPASYITVRPRR  243 (251)
Q Consensus       198 ~Rl~P~iP~~lvn~~aGi~~v~~~~F~l~t~iG~lP~~~l~~~~G~  243 (251)
                      .|++|++|++++|+++|++++|+++|++++++|.+|++.+++++|+
T Consensus        77 ~~~~P~~P~~~~~~~ag~~~~~~~~f~~~~~~g~~~~~~~~~~~G~  122 (123)
T PF09335_consen   77 SRFIPGLPFDVVNYLAGITRMPFRRFFLASLIGKLPWTILYVLLGY  122 (123)
T ss_pred             HHHHHHccHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            9999999999999999999999999999999999999999999996

The yeast member of this family (P36164 from SWISSPROT) localises with the t-SNARE Tlg2 [].

>PRK10847 hypothetical protein; Provisional

Probab=99.80  E-value=1.6e-18  Score=151.61  Aligned_cols=134  Identities=18%  Similarity=0.200  Sum_probs=111.5

Q ss_pred             HHHHHHHHhh---hccccChHHHHHHHHHHHHH-------HHHHHHHHHHHHHHhHHHHHHHHHHhcHHHHhhh----h-
Q 025527          109 IGYCSTYIFM---QTFMIPGTIFMSLLAGALFG-------VIRGLILVVFNATAGASSCFFLSKLIGRPLVSWF----W-  173 (251)
Q Consensus       109 l~fi~~~i~~---~~~~iPg~~~L~l~aG~lfG-------~~~G~l~~~lgs~lGa~i~y~lgR~lGr~~~~~~----~-  173 (251)
                      ++|+.+++..   ...++|++++ .+++|++.+       ++..++.+++|+++|+.++|++||++|++.+++.    . 
T Consensus        32 ~lfl~~~le~~~~~~~~lPge~~-l~~~G~la~~~~~~~~~~~~~~~a~~Ga~lG~~i~Y~lGr~~G~~~l~~~~~~~~~  110 (219)
T PRK10847         32 ILFLILFCETGLVVTPFLPGDSL-LFVAGALASLPTNDLNVHMMVALMLIAAIVGDAVNYTIGRLFGEKLFSNPNSKIFR  110 (219)
T ss_pred             HHHHHHHHHhccccCCCCCchHH-HHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHhhccccccCC
Confidence            3555655543   2356899984 677787754       5677899999999999999999999999987532    2 


Q ss_pred             hhhHHHHHHHHHHhccchHHHHHHhhcccccchhhhhHhhhccCCChhHHHHHHHHhHHHHHHHHHHHHHHHHH
Q 025527          174 PEKLRFFQAEIAKRREKLLNYMLFLRITPSLPNLFINLASPIVDIPFHIFFLATLIGLIPASYITVRPRRCVIL  247 (251)
Q Consensus       174 ~~~l~~~~~~l~~~~~~~~~~vl~~Rl~P~iP~~lvn~~aGi~~v~~~~F~l~t~iG~lP~~~l~~~~G~~l~~  247 (251)
                      ++++++.+++++||   +...+++.|++|+++ +++|++||+++||+++|++.+.+|.++|+.+++.+|+.+++
T Consensus       111 ~~~l~~~~~~~~r~---G~~~v~i~RfiP~~R-~~~~~~aG~~~m~~~~F~~~~~lg~~~W~~~~~~~Gy~~g~  180 (219)
T PRK10847        111 RSYLDKTHQFYEKH---GGKTIILARFVPIVR-TFAPFVAGMGHMSYRHFAAYNVIGALLWVLLFTYAGYFFGT  180 (219)
T ss_pred             HHHHHHHHHHHHHc---CCEEEEeeCCccchH-hHHHHHhHhcCCChHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence            34588999999987   457899999999997 58999999999999999999999999999999999998774

>COG0586 DedA Uncharacterized membrane-associated protein [Function unknown]

Probab=99.80  E-value=2e-18  Score=149.96  Aligned_cols=138  Identities=17%  Similarity=0.322  Sum_probs=119.3

Q ss_pred             HHHHHHHHHhh---hccccChHHHHHHHHHHH-----HHHHHHHHHHHHHHHHhHHHHHHHHHHhcHHHHhhhhh-----
Q 025527          108 IIGYCSTYIFM---QTFMIPGTIFMSLLAGAL-----FGVIRGLILVVFNATAGASSCFFLSKLIGRPLVSWFWP-----  174 (251)
Q Consensus       108 ~l~fi~~~i~~---~~~~iPg~~~L~l~aG~l-----fG~~~G~l~~~lgs~lGa~i~y~lgR~lGr~~~~~~~~-----  174 (251)
                      ..+|+.++.+.   ...++|+++ +.+++|++     ++++...+.+.+|+.+|+.+.|++||++|++.+++..+     
T Consensus        18 ~~~f~~~f~e~~l~~~~~lPge~-iL~~~G~l~~~g~~~~~~~i~~~~lga~lGd~i~Y~iGr~~G~~~l~~~~~~~~~~   96 (208)
T COG0586          18 LGVFLILFLESGLLVGPPLPGEV-LLLLAGALAAQGKLNLWLVILVATLGALLGDLISYWIGRRFGRKLLRKLWSYRLLK   96 (208)
T ss_pred             HHHHHHHHHHHHHHcCCCCCchH-HHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcHHHHHhhhhhccCC
Confidence            45555656555   567899998 46888887     46788899999999999999999999999998876654     


Q ss_pred             -hhHHHHHHHHHHhccchHHHHHHhhcccccchhhhhHhhhccCCChhHHHHHHHHhHHHHHHHHHHHHHHHHHHHh
Q 025527          175 -EKLRFFQAEIAKRREKLLNYMLFLRITPSLPNLFINLASPIVDIPFHIFFLATLIGLIPASYITVRPRRCVILVVK  250 (251)
Q Consensus       175 -~~l~~~~~~l~~~~~~~~~~vl~~Rl~P~iP~~lvn~~aGi~~v~~~~F~l~t~iG~lP~~~l~~~~G~~l~~~~~  250 (251)
                       ++++|.+++++||   +...+++.|++|.++ ++++++||+++||+++|.+.+++|.+.|..++++.|+.+++.++
T Consensus        97 ~~~l~~a~~~f~r~---G~~~vf~~RFip~vR-t~ip~~AG~~~m~~~~F~~~n~~ga~iW~~~~~~lGy~~G~~~~  169 (208)
T COG0586          97 RKKLDKAELLFERH---GLFAIFLGRFIPGVR-TLVPIVAGMSKMPLRRFLLYNILGALLWALVLTLLGYLLGEVID  169 (208)
T ss_pred             HHHHHHHHHHHHHc---CchhhhhhcccchhH-hhhhHhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHhccchH
Confidence             4678999999997   568999999999996 69999999999999999999999999999999999999986643

>COG1238 Predicted membrane protein [Function unknown]

Probab=99.40  E-value=8.8e-12  Score=104.20  Aligned_cols=134  Identities=11%  Similarity=0.138  Sum_probs=107.2

Q ss_pred             HHHHHHHHHhhhccccChHHHHHHHHHHH--HHHHHHHHHHHHHHHHhHHHHHHHHHHhcHHHHhhhhh---hhHHHHHH
Q 025527          108 IIGYCSTYIFMQTFMIPGTIFMSLLAGAL--FGVIRGLILVVFNATAGASSCFFLSKLIGRPLVSWFWP---EKLRFFQA  182 (251)
Q Consensus       108 ~l~fi~~~i~~~~~~iPg~~~L~l~aG~l--fG~~~G~l~~~lgs~lGa~i~y~lgR~lGr~~~~~~~~---~~l~~~~~  182 (251)
                      ..+|+..|+..+.+|+|.++++  ++..+  +.++.-.+++.+|+++|++++|++||+.++...++...   ++.++.++
T Consensus        20 ~~Lf~vaF~eat~lP~~sE~~l--~~m~~~~~~~~~~~~vAt~gs~lG~~~~y~lG~~~~~~~~~~~~~~~~~~~~~~~~   97 (161)
T COG1238          20 AGLFIVAFLEATLLPVPSEVLL--APMLLLGLNAWILALVATLGSVLGGLVNYALGRFLPEFIARRWFPGSEEALEKLQE   97 (161)
T ss_pred             HHHHHHHHHHHHhcCCChHHHH--HHHHHcCCchHHHHHHHHHHhhHhHHHHHHHHhcchHHHHHHhhcchHHHHHHHHH
Confidence            5778889999999999999842  22222  67888899999999999999999999998887776442   34555554


Q ss_pred             -HHHHhccchHHHHHHhhcccccchhhhhHhhhccCCChhHHHHHHHHhHHHHHHHHHHHHHHHHHH
Q 025527          183 -EIAKRREKLLNYMLFLRITPSLPNLFINLASPIVDIPFHIFFLATLIGLIPASYITVRPRRCVILV  248 (251)
Q Consensus       183 -~l~~~~~~~~~~vl~~Rl~P~iP~~lvn~~aGi~~v~~~~F~l~t~iG~lP~~~l~~~~G~~l~~~  248 (251)
                       +.+|+   +.+.+++.= +|.+| ++++++||..+++++.|++..++|.....++.+++....++.
T Consensus        98 ~~~~ry---g~~~ll~s~-lp~ig-d~~t~~aG~~~~~~~~f~~~~~igk~~Ry~~la~~~~~~~~~  159 (161)
T COG1238          98 KWYRRY---GVWTLLLSW-LPPIG-DVLTLLAGWLRLNFLPFILLVFLGKAARYLLLAALTLLGGER  159 (161)
T ss_pred             HHHHHH---HHHHHHHHh-ccccc-hHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHhcchh
Confidence             45554   566666664 56689 999999999999999999999999999999999888766543

>PF06695 Sm_multidrug_ex: Putative small multi-drug export protein; InterPro: IPR009577 This family contains a small number of putative small multi-drug export proteins

Probab=96.11  E-value=0.1  Score=41.62  Aligned_cols=96  Identities=17%  Similarity=0.187  Sum_probs=65.2

Q ss_pred             HHHHHHHHHHHHHHHHhHHHHHHHHHHhcHHH-----Hhhhh---hhhHHHHHHHHHHhccchHHHHHHhhcccccc---
Q 025527          137 FGVIRGLILVVFNATAGASSCFFLSKLIGRPL-----VSWFW---PEKLRFFQAEIAKRREKLLNYMLFLRITPSLP---  205 (251)
Q Consensus       137 fG~~~G~l~~~lgs~lGa~i~y~lgR~lGr~~-----~~~~~---~~~l~~~~~~l~~~~~~~~~~vl~~Rl~P~iP---  205 (251)
                      ++++..++++.+|+.+.....+++-+.+-+-.     .++..   .+|.++-++.++|+   ++..+.+.=.+| +|   
T Consensus        14 l~p~~~~~~~~lGN~l~vp~i~~~~~~i~~~l~~~~~~~~~~~~~~~k~~~~~~~i~ky---g~~GL~lFVaIP-lP~TG   89 (121)
T PF06695_consen   14 LPPWEAFLLAFLGNILPVPFILLFLDKILKWLKRKPWLKKFYEWLEKKAEKKSKKIEKY---GFWGLALFVAIP-LPGTG   89 (121)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH---hHHHHHHHHhCC-CCcch
Confidence            34678888999999888777776665543221     22221   23444556667765   455555554566 35   


Q ss_pred             hhhhhHhhhccCCChhHHHHHHHHhHHHHHH
Q 025527          206 NLFINLASPIVDIPFHIFFLATLIGLIPASY  236 (251)
Q Consensus       206 ~~lvn~~aGi~~v~~~~F~l~t~iG~lP~~~  236 (251)
                      -+.-+++|-+.+++.++=+++..+|.+...+
T Consensus        90 ~wtgal~a~llg~~~~~~~~ai~~Gv~ia~~  120 (121)
T PF06695_consen   90 AWTGALIASLLGMDKKKAFLAIFLGVLIAGV  120 (121)
T ss_pred             HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHh
Confidence            5678899999999999999999999876653

>PLN02953 phosphatidate cytidylyltransferase

Probab=90.96  E-value=15  Score=35.17  Aligned_cols=26  Identities=19%  Similarity=0.253  Sum_probs=20.6

Q ss_pred             HHHHHHHHhHHHHHHHHHHhcHHHHh
Q 025527          145 LVVFNATAGASSCFFLSKLIGRPLVS  170 (251)
Q Consensus       145 ~~~lgs~lGa~i~y~lgR~lGr~~~~  170 (251)
                      +.++......+.+|+.||.+||..+.
T Consensus       273 ~~~~~vw~~Di~AY~~G~~fGk~kl~  298 (403)
T PLN02953        273 ISFSGVIATDTFAFLGGKAFGRTPLT  298 (403)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCCCCC
Confidence            44555667899999999999987665

>PRK11677 hypothetical protein; Provisional

Probab=84.44  E-value=2.8  Score=34.20  Aligned_cols=25  Identities=8%  Similarity=-0.012  Sum_probs=19.9

Q ss_pred             HHHHHHHHHHhHHHHHHHHHHhcHH
Q 025527          143 LILVVFNATAGASSCFFLSKLIGRP  167 (251)
Q Consensus       143 ~l~~~lgs~lGa~i~y~lgR~lGr~  167 (251)
                      ++++.+|-.+|.+++|+++|+..+.
T Consensus         3 W~~a~i~livG~iiG~~~~R~~~~~   27 (134)
T PRK11677          3 WEYALIGLVVGIIIGAVAMRFGNRK   27 (134)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhccch
Confidence            3567788889999999999986544

>TIGR02359 thiW thiW protein

Probab=83.48  E-value=19  Score=30.22  Aligned_cols=34  Identities=21%  Similarity=0.301  Sum_probs=27.1

Q ss_pred             ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHH
Q 025527          124 PGTIFMSLLAGALFGVIRGLILVVFNATAGASSC  157 (251)
Q Consensus       124 Pg~~~L~l~aG~lfG~~~G~l~~~lgs~lGa~i~  157 (251)
                      |.+-+.++++|.+||||+|.+...+++.++.+..
T Consensus        32 ~~~~i~~vlaavllGP~~g~~~a~i~~ll~~l~~   65 (160)
T TIGR02359        32 PVQHFVNVIAGVLLGPWYALAVAFIIGLLRNTLG   65 (160)
T ss_pred             ChhHHHHHHHHHHHchHHHHHHHHHHHHHHHHhC
Confidence            4444468999999999999999888888776653

Levels of thiamine pyrophosphate (TPP) or thiamine regulate transcription or translation of a number of thiamine biosynthesis, salvage, or transport genes in a wide range of prokaryotes. The mechanism involves direct binding, with no protein involved,to a structural element called THI found in the untranslated upstream region of thiamine metabolism gene operons. This element is called a riboswitch and is seen also for other metabolites such as FMN and glycine. This protein family consists of proteins identified in operons controlled by the THI riboswitch and designated ThiW. The hydrophobic nature of this protein and reconstructed metabolic background suggests that this protein acts in transport of a thiazole precursor of thiamine.

>PRK01844 hypothetical protein; Provisional

Probab=82.26  E-value=3.5  Score=29.99  Aligned_cols=34  Identities=18%  Similarity=0.247  Sum_probs=26.6

Q ss_pred             HHHHHHHHHHHHHHhHHHHHHHHHHhcHHHHhhh
Q 025527          139 VIRGLILVVFNATAGASSCFFLSKLIGRPLVSWF  172 (251)
Q Consensus       139 ~~~G~l~~~lgs~lGa~i~y~lgR~lGr~~~~~~  172 (251)
                      .|...++..++..+|.+++|+++|+..++.+++-
T Consensus         3 ~~~~I~l~I~~li~G~~~Gff~ark~~~k~lk~N   36 (72)
T PRK01844          3 IWLGILVGVVALVAGVALGFFIARKYMMNYLQKN   36 (72)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence            3455667788899999999999998877766543

>PF06695 Sm_multidrug_ex: Putative small multi-drug export protein; InterPro: IPR009577 This family contains a small number of putative small multi-drug export proteins

Probab=80.86  E-value=15  Score=29.16  Aligned_cols=36  Identities=17%  Similarity=0.375  Sum_probs=23.2

Q ss_pred             ccccChHH-HHHHHHHHHHH--HHHHHHHHHHHHHHhHH
Q 025527          120 TFMIPGTI-FMSLLAGALFG--VIRGLILVVFNATAGAS  155 (251)
Q Consensus       120 ~~~iPg~~-~L~l~aG~lfG--~~~G~l~~~lgs~lGa~  155 (251)
                      ..|+|++- ....+.+.++|  ....+....+|..++++
T Consensus        82 aIPlP~TG~wtgal~a~llg~~~~~~~~ai~~Gv~ia~~  120 (121)
T PF06695_consen   82 AIPLPGTGAWTGALIASLLGMDKKKAFLAIFLGVLIAGV  120 (121)
T ss_pred             hCCCCcchHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHh
Confidence            35788763 23445567776  46777777777777654

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00