Citrus Sinensis ID: 025546

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-
Protein Sequence
MAETDRQQEKAGGEEEESLLEGMAVVNFDVLCSTVALQTQGKWRTPEGDGADVNMDGGEFGAVLRMWEGEVLDCFDDRPIALQSACCPCYRFGKNMRRAGFGYCFVQGSAYFILAIGAIMNFIAFIVTRRHCFLYLAMAFFISIGGYLGFLRTQMRKKFNILGSDSSMDDCIYHLVCPCCTLCQEARTLEMNNVQDGTWHGRGDTICIGSYSEGNRDFFKLHQPPVSTKWPERCIMQKSRDVVITLEPEKL
Secondary Structure (PSIPRED)
ccHHHHHHHHHccHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHcccHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHEEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHcccHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccHHHHHHcccccHcHHHHcccEEEccHHHHHHHHHHHHccccccccccHHHcccccccccccccccccccccccccHHHEEEEcccHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHccHHHHHHHHHHHHHHcccccccEEccccEEEEEEccccccccEcccccccccccccccccccccccccccccccc
Coil and Loop (DISEMBL)
maetdrqqekaggeeeESLLEGMAVVNFDVLCSTVALqtqgkwrtpegdgadvnmdggeFGAVLRMWEGevldcfddrpialqsaccpcyrfgknmrragfgycfvqGSAYFILAIGAIMNFIAFIVTRRHCFLYLAMAFFISIGGYLGFLRTQMRKKFnilgsdssmddciyhlvcpcctlcqEARTLEmnnvqdgtwhgrgdticigsysegnrdffklhqppvstkwpercimqksRDVVITLEPEKL
Flexible Loop (DISEMBL)
maetdrqqekaggeeeeSLLEGMAVVNFDVLCSTVALQtqgkwrtpegdgadvnMDGGEFGAVLRMWEGEVLDCFDDRPIALQSACCPCYRFGKNMRRAGFGYCFVQGSAYFILAIGAIMNFIAFIVTRRHCFLYLAMAFFISIGGYLGFLRTQMRKKFNILGSDSSMDDCIYHLVCPCCTLCQEARTLEMNNVQDGTWHGRGDTICIGSYSEGNRDFFKLHQPpvstkwpercimqksrdvvitlepekl
Low Complexity Region (SEG)
MAETDRQQEKAggeeeesllegMAVVNFDVLCSTVALQTQGKWRTPEGDGADVNMDGGEFGAVLRMWEGEVLDCFDDRPIALQSACCPCYRFGKNMRRAGFGYCFVQGSAYFILAIGAIMNFIAFIVTRRHCFLYLAMAFFISIGGYLGFLRTQMRKKFNILGSDSSMDDCIYHLVCPCCTLCQEARTLEMNNVQDGTWHGRGDTICIGSYSEGNRDFFKLHQPPVSTKWPERCIMQKSRDVVITLEPEKL
Disordered region (IsUnstruct)
*******************LEGMAVVNFDVLCSTVALQTQGKWRTPEGDGADVNMDGGEFGAVLRMWEGEVLDCFDDRPIALQSACCPCYRFGKNMRRAGFGYCFVQGSAYFILAIGAIMNFIAFIVTRRHCFLYLAMAFFISIGGYLGFLRTQMRKKFNILGSDSSMDDCIYHLVCPCCTLCQEARTLEMNNVQDGTWHGRGDTICIGSYSEGNRDFFKLHQPPVSTKWPERCIMQKSRDVVI*******
Disordered Region (DISOPRED)
**********************MAVVNFDVL*************************************GEVLDCFDDRPIALQSACCPCYRFGKNMRRAGFGYCFVQGSAYFILAIGAIMNFIAFIVTRRHCFLYLAMAFFISIGGYLGFLRTQMRKKFNILGSDSSMDDCIYHLVCPCCTLCQEARTLEMNNVQDGTWH***************************************************
Disordered Region (DISEMBL)
******************LLEGMAVVNFDVLCSTVALQTQGKWRTPEGDGADVNMDGGEFGAVLRMWEGEVLDCFDDRPIALQSACCPCYRFGKNMRRAGFGYCFVQGSAYFILAIGAIMNFIAFIVTRRHCFLYLAMAFFISIGGYLGFLRTQMRKKFNILGSDSSMDDCIYHLVCPCCTLCQEARTLEMNNVQDGTWHGRGDTICIGSYSEGNRDFFKLHQPPVSTKWPERCIMQKSRDVVITLEPEKL
Disordered Region (DISPRO)
***************EESLLEGMAVVNFDVLCSTVALQTQG**********************LRMWEGEVLDCFDDRPIALQSACCPCYRFGKNMRRAGFGYCFVQGSAYFILAIGAIMNFIAFIVTRRHCFLYLAMAFFISIGGYLGFLRTQMRKKFNILGSDSSMDDCIYHLVCPCCTLCQEARTLEMNNVQDGTWHGRGDTICIGSYSEGNRDFFKLHQPPVST***********************
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAETDRQQEKAGGEEEESLLEGMAVVNFDVLCSTVALQTQGKWRTPEGDGADVNMDGGEFGAVLRMWEGEVLDCFDDRPIALQSACCPCYRFGKNMRRAGFGYCFVQGSAYFILAIGAIMNFIAFIVTRRHCFLYLAMAFFISIGGYLGFLRTQMRKKFNILGSDSSMDDCIYHLVCPCCTLCQEARTLEMNNVQDGTWHGRGDTICIGSYSEGNRDFFKLHQPPVSTKWPERCIMQKSRDVVITLEPEKL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	251	2.2.26 [Sep-21-2011]
Q9M815	190	Protein PLANT CADMIUM RES	no	no	0.521	0.689	0.269	1e-08
Q8S8T8	190	Protein PLANT CADMIUM RES	no	no	0.450	0.594	0.310	5e-05
B4FF80	184	Cell number regulator 5 O	N/A	no	0.458	0.625	0.276	5e-05
Q9LS43	133	Protein PLANT CADMIUM RES	no	no	0.434	0.819	0.272	7e-05
Q9LS45	184	Protein PLANT CADMIUM RES	no	no	0.466	0.635	0.277	0.0003
Q3EBY6	416	Protein MID1-COMPLEMENTIN	no	no	0.430	0.259	0.25	0.0007
Q9LQU4	152	Protein PLANT CADMIUM RES	no	no	0.394	0.651	0.285	0.0009

>sp|Q9M815|PCR8_ARATH Protein PLANT CADMIUM RESISTANCE 8 OS=Arabidopsis thaliana GN=PCR8 PE=1 SV=2

 Score = 60.5 bits (145), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 44/163 (26%), Positives = 72/163 (44%), Gaps = 32/163 (19%)

Query: 41  GKWRTPEGDGADVNMDGGEFGAVLRMWEGEVLDCFDDRPIALQSACCPCYRFGKNMRRAG 100
            ++  P    A+VN+  G      R W   + DC  D+  A+ +   PC  FG+      
Sbjct: 33  SQFAPPNYQQANVNLSVG------RPWSTGLFDCQADQANAVLTTIVPCVTFGQ------ 80

Query: 101 FGYCFVQGSAYFILAIGAIMNFIAFIVTRRHCFLYLAMAFFISIGGYLGF-LRTQMRKKF 159
                          I  +M+    +      F+YL M   +     +G   R +MR+KF
Sbjct: 81  ---------------IAEVMDE-GEMTCPLGTFMYLLMMPALCSHWVMGSKYREKMRRKF 124

Query: 160 NILGSDSSMDDCIYHLVCPCCTLCQEARTLEMNNVQDGT-WHG 201
           N++  ++   DC  H++CPCC+LCQE R L++ N+     W+G
Sbjct: 125 NLV--EAPYSDCASHVLCPCCSLCQEYRELKIRNLDPSLGWNG 165

May be involved in heavy metals transport.
Arabidopsis thaliana (taxid: 3702)

>sp|Q8S8T8|PCR10_ARATH Protein PLANT CADMIUM RESISTANCE 10 OS=Arabidopsis thaliana GN=PCR10 PE=2 SV=1

 Score = 48.5 bits (114), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 40/129 (31%), Positives = 53/129 (41%), Gaps = 16/129 (12%)

Query: 65  RMWEGEVLDCFDDRPIALQSAC----CPCYRFGKNMRRAGFGYCFVQGSAYFILAIGAIM 120
           R W   +  CFDD    +QS C    CPCY FGKN    G G     G         A++
Sbjct: 45  RQWSSGICACFDD----MQSCCVGLFCPCYIFGKNAELLGSGT--FAGPCLTHCISWALV 98

Query: 121 NFIAFIVTRRHCFLYLAMAFFISIGGYLGFLRTQMRKKFNILGSDSSMDDCIYHLVCPCC 180
           N I    T     L L   F   +  Y    R  +R K+N+   ++   D + H  C  C
Sbjct: 99  NTICCFATNGA-LLGLPGCF---VSCYACGYRKSLRAKYNL--QEAPCGDFVTHFFCHLC 152

Query: 181 TLCQEARTL 189
            +CQE R +
Sbjct: 153 AICQEYREI 161

May be involved in cadmium resistance.

Arabidopsis thaliana (taxid: 3702)

>sp|B4FF80|CNR5_MAIZE Cell number regulator 5 OS=Zea mays GN=CNR5 PE=2 SV=1

 Score = 48.1 bits (113), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 34/123 (27%), Positives = 51/123 (41%), Gaps = 8/123 (6%)

Query: 67  WEGEVLDCFDDRPIALQSACCPCYRFGKNMRRAGFGYCFVQGSAYFILAIGAIMNFIAFI 126
           W   +  CFDD       A CPC+ FGKN +  G G   + GS      +  ++  +  +
Sbjct: 45  WSSGICACFDDPQSCCIGAICPCFLFGKNAQFLGSGT--LAGSCTTHCMLWGLLTSLCCV 102

Query: 127 VTRRHCFLYLAMAFFISIGGYLGFLRTQMRKKFNILGSDSSMDDCIYHLVCPCCTLCQEA 186
            T          A      GY    R+ +R K+N+   ++   D   HL C  C +CQE 
Sbjct: 103 FTGGLVLAVPGSAVACYACGY----RSALRTKYNL--PEAPCGDLTTHLFCHLCAICQEY 156

Query: 187 RTL 189
           R +
Sbjct: 157 REI 159

Zea mays (taxid: 4577)

>sp|Q9LS43|PCR7_ARATH Protein PLANT CADMIUM RESISTANCE 7 OS=Arabidopsis thaliana GN=PCR7 PE=2 SV=1

 Score = 47.8 bits (112), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 39/143 (27%), Positives = 54/143 (37%), Gaps = 34/143 (23%)

Query: 65  RMWEGEVLDCFDDRPIALQSACCPCYRFGK-----NMRRAGFGYCFVQGSAYFILAIGAI 119
           + W   +  C +D   A  +  CPC  FG+     +  R G G C V             
Sbjct: 3   KQWTSGLFSCMEDSETACLTCFCPCVTFGRIADISDEGRTGCGRCGV------------- 49

Query: 120 MNFIAFIVTRRHCFLYLAMAFFISIGGYLGFLRTQMRKKFNILGSDSSMDDCIYHLVCPC 179
             F   I     C + L   F  +        RT++R KF +   +S   DC+ H  C C
Sbjct: 50  --FYGLIC----CVVGLPCLFSCT-------YRTKIRSKFGL--PESPTSDCVTHFFCEC 94

Query: 180 CTLCQEARTLEMNNVQDGT-WHG 201
           C LCQE R L+   +     W G
Sbjct: 95  CALCQEHRELKTRGLDPSIGWSG 117

May be involved in heavy metals transport.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LS45|PCR5_ARATH Protein PLANT CADMIUM RESISTANCE 5 OS=Arabidopsis thaliana GN=PCR5 PE=2 SV=1

 Score = 45.8 bits (107), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 41/148 (27%), Positives = 57/148 (38%), Gaps = 31/148 (20%)

Query: 48  GDGADVNMDGG---EFGAVLRMWEGEVLDCFDDRPIALQSACCPCYRFGK--NMRRAGFG 102
           G G   N+  G    +      W  ++ DC +D   A+ +   PC  FG+   +   G  
Sbjct: 30  GIGKPANIPTGIPVNYQQTQNQWSSQLFDCMNDSENAVITLIAPCVTFGQIAEIVDEGAT 89

Query: 103 YCFVQGSAYFILAIGAIMNFIAFIVTRRHCFLYLAMAFFISIGGYLGFLRTQMRKKFNIL 162
            C   G  Y     GA               L+   A F+    Y    R ++RKKF + 
Sbjct: 90  PCATAGLLY-----GA---------------LFFTGASFV----YSYMFRARIRKKFGL- 124

Query: 163 GSDSSMDDCIYHLVCPCCTLCQEARTLE 190
             D+   D I HLVC    LCQE R L+
Sbjct: 125 -PDAPAPDWITHLVCMPFALCQEYRELK 151

May be involved in heavy metals transport.

Arabidopsis thaliana (taxid: 3702)

>sp|Q3EBY6|MCAC2_ARATH Protein MID1-COMPLEMENTING ACTIVITY 2 OS=Arabidopsis thaliana GN=MCA2 PE=2 SV=1

 Score = 44.7 bits (104), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 33/132 (25%), Positives = 54/132 (40%), Gaps = 24/132 (18%)

Query: 67  WEGEVLDCFDDRPIALQSACCPCYRFGKNMRRAGFGYCFVQGSAYFILAIGAIMNFIAFI 126
           W  ++LDC  +  + L++   PC    K              ++  I +     N I + 
Sbjct: 292 WHADLLDCCSEPCLCLKTLFFPCGTLAK---------ISTVATSRQISSTEVCKNLIVY- 341

Query: 127 VTRRHCFLYLAMAFFISIGGYLGFLRTQMRKKFNILGSDSSMDDCIYHLVCPCCTLCQEA 186
                       +  +S   Y   +R ++RK  NI G    +DD + HL+C CC L QE 
Sbjct: 342 ------------SLILSCCCYTCCIRKKLRKTLNITGG--CIDDFLSHLMCCCCALVQEL 387

Query: 187 RTLEMNNVQDGT 198
           R +E++    GT
Sbjct: 388 REVEIHRASYGT 399

Calcium-permeable stretch-activated channel component. Probably involved in mechanosensing and in mechano-stimulated calcium uptake mechanism.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LQU4|PCR2_ARATH Protein PLANT CADMIUM RESISTANCE 2 OS=Arabidopsis thaliana GN=PCR2 PE=1 SV=1

 Score = 44.3 bits (103), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 36/126 (28%), Positives = 51/126 (40%), Gaps = 27/126 (21%)

Query: 67  WEGEVLDCFDDRPIALQSACCPCYRFGK--NMRRAGFGYCFVQGSAYFILAIGAIMNFIA 124
           W     DCF D      +  CPC  FG+   +   G   C   G+ Y ++A+        
Sbjct: 16  WSTGFCDCFSDCKNCCITFWCPCITFGQVAEIVDRGSTSCGTAGALYALIAV-------- 67

Query: 125 FIVTRRHCFLYLAMAFFISIGGYLGFLRTQMRKKFNILGSDSSMDDCIYHLVCPCCTLCQ 184
             VT   C              Y  F R +MR ++NI G D +  DC+ H  C  C+L Q
Sbjct: 68  --VTGCACI-------------YSCFYRGKMRAQYNIKGDDCT--DCLKHFCCELCSLTQ 110

Query: 185 EARTLE 190
           + R L+
Sbjct: 111 QYRELK 116

Zinc transporter acting in both zinc extrusion and long-distance zinc transport. Involved in the loading of zinc into the xyleme and in the detoxification of excess zinc at the epidermal cells. Acts independently from the zinc transporters HMA2 and HMA4. May be also involved in cadmium resistance.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	251
359495710	249	PREDICTED: uncharacterized protein LOC10	0.896	0.903	0.712	1e-94
255567467	242	conserved hypothetical protein [Ricinus	0.840	0.871	0.730	1e-88
224116274	235	predicted protein [Populus trichocarpa]	0.888	0.948	0.672	3e-87
449433914	250	PREDICTED: cell number regulator 5-like	0.864	0.868	0.669	6e-83
363806906	255	uncharacterized protein LOC100806189 [Gl	0.968	0.952	0.597	2e-81
356549427	246	PREDICTED: cell number regulator 5-like	0.940	0.959	0.612	1e-79
224078770	238	predicted protein [Populus trichocarpa]	0.888	0.936	0.625	4e-78
297843966	255	hypothetical protein ARALYDRAFT_471274 [	0.812	0.8	0.629	1e-74
357475975	253	hypothetical protein MTR_4g091550 [Medic	0.860	0.853	0.622	2e-74
18391271	254	PLAC8 family protein [Arabidopsis thalia	0.812	0.803	0.624	2e-73

>gi|359495710|ref|XP_003635067.1| PREDICTED: uncharacterized protein LOC100246768 isoform 1 [Vitis vinifera] gi|297745662|emb|CBI40873.3| unnamed protein product [Vitis vinifera]

 Score =  352 bits (902), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 161/226 (71%), Positives = 191/226 (84%), Gaps = 1/226 (0%)

Query: 17  ESLLEGMAVVNFDVLCSTVALQTQGKWRTPEGDGADVNMDGGEFGAVLRMWEGEVLDCFD 76
           + LLEG+AV++FD+LCSTVALQ QGKW   + +G   + D GEFG V RMWEGE+LDCF+
Sbjct: 19  QRLLEGVAVLDFDMLCSTVALQAQGKWTKFDHNGNGDDEDSGEFGGVFRMWEGELLDCFE 78

Query: 77  DRPIALQSACCPCYRFGKNMRRAGFGYCFVQGSAYFILAIGAIMNFIAFIVTRRHCFLYL 136
           DR IA+Q+ACCPCYRFGKNMRRAGFG CF+QG+ YFIL+  A ++ IAF VT+RHCFLY+
Sbjct: 79  DRRIAIQTACCPCYRFGKNMRRAGFGSCFIQGTVYFILSFSAFLSCIAFFVTKRHCFLYM 138

Query: 137 AMAFFISIGGYLGFLRTQMRKKFNILGSDSSMDDCIYHLVCPCCTLCQEARTLEMNNVQD 196
           A+AF ISIG Y+GF RTQ++KKFNI G DSS+DDC+YHL+CPCCTLCQE+RTLEMNNVQD
Sbjct: 139 AVAFTISIGTYMGFFRTQIKKKFNIRGGDSSLDDCVYHLICPCCTLCQESRTLEMNNVQD 198

Query: 197 GTWHGRGDTICIGSYSEGNRDFFKLHQPP-VSTKWPERCIMQKSRD 241
           GTWHGRGDTICIGSY E ++ FF+LH PP VSTK PE C MQKS D
Sbjct: 199 GTWHGRGDTICIGSYGESSKAFFELHPPPLVSTKSPEPCSMQKSTD 244

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255567467|ref|XP_002524713.1| conserved hypothetical protein [Ricinus communis] gi|223536074|gb|EEF37732.1| conserved hypothetical protein [Ricinus communis]

 Score =  332 bits (850), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 160/219 (73%), Positives = 183/219 (83%), Gaps = 8/219 (3%)

Query: 17  ESLLEGMAVVNFDVLCSTVALQTQGKWRTPEGDGADVNMD------GGEFGAVLRMWEGE 70
           + L+EGMAV++FD+LCSTVA+QTQGKWR  E +  D N +      GGEFG V RMWEGE
Sbjct: 20  QKLIEGMAVLDFDMLCSTVAMQTQGKWRKLESNDFDGNSNNGGDIVGGEFGGVFRMWEGE 79

Query: 71  VLDCFDDRPIALQSACCPCYRFGKNMRRAGFGYCFVQGSAYFILAIGAIMNFIAFIVTRR 130
           VLDCFDD  IA++S CCPCYRFGKNMRRAGFG CF+QG+AY ILA+GA++N IAFIVT+R
Sbjct: 80  VLDCFDDHRIAIESLCCPCYRFGKNMRRAGFGSCFLQGTAYCILALGALLNLIAFIVTKR 139

Query: 131 HCFLYLAMAFFISIGGYLGFLRTQMRKKFNILGSDSSMDDCIYHLVCPCCTLCQEARTLE 190
           HCFLYLA+AF +SIG YL F RTQMR+KFNI GSDSS+DDCIYHL CPCC LCQE+RTLE
Sbjct: 140 HCFLYLAVAFTVSIGMYLSFFRTQMRQKFNIRGSDSSLDDCIYHLFCPCCALCQESRTLE 199

Query: 191 MNNVQDGTWHGRGDTICIGSYSEGNRDFFKLHQPP-VST 228
           MNNVQDGTWHGRGDTICIGSYSE N+  F+L  P  VST
Sbjct: 200 MNNVQDGTWHGRGDTICIGSYSE-NKAIFELRPPSTVST 237

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224116274|ref|XP_002317257.1| predicted protein [Populus trichocarpa] gi|222860322|gb|EEE97869.1| predicted protein [Populus trichocarpa]

 Score =  327 bits (838), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 154/229 (67%), Positives = 185/229 (80%), Gaps = 6/229 (2%)

Query: 20  LEGMAVVNFDVLCSTVALQTQGKWRTPEGDGADVNMDGGEFG-----AVLRMWEGEVLDC 74
           +EGM+V++FD+LCSTVA+QTQGK+    G   + + D   +         RMWEGEVLDC
Sbjct: 1   MEGMSVLDFDMLCSTVAMQTQGKYWAKLGSNEEEDDDLNRYNNGGGGGGFRMWEGEVLDC 60

Query: 75  FDDRPIALQSACCPCYRFGKNMRRAGFGYCFVQGSAYFILAIGAIMNFIAFIVTRRHCFL 134
           FDDR IA++S CCPCYRFGKNMRRAGFG CF+QG AY+IL +GA++NFIAFIVT+R  FL
Sbjct: 61  FDDRRIAIESLCCPCYRFGKNMRRAGFGSCFLQGIAYYILGLGALLNFIAFIVTKRRRFL 120

Query: 135 YLAMAFFISIGGYLGFLRTQMRKKFNILGSDSSMDDCIYHLVCPCCTLCQEARTLEMNNV 194
           YL++ F  S+G YLGF RTQMRKKFNI GSDSS+DDCIYHL+CPCCTL QE+RTLEMNNV
Sbjct: 121 YLSIVFTFSLGIYLGFFRTQMRKKFNIRGSDSSLDDCIYHLICPCCTLSQESRTLEMNNV 180

Query: 195 QDGTWHGRGDTICIGSYSEGNRDFFKLHQPP-VSTKWPERCIMQKSRDV 242
           QDGTWHGRGDTIC+GSYSEGN+ F +LH PP V+T  P+ C MQK+ +V
Sbjct: 181 QDGTWHGRGDTICVGSYSEGNKVFLELHPPPAVTTSSPDVCSMQKNTNV 229

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449433914|ref|XP_004134741.1| PREDICTED: cell number regulator 5-like [Cucumis sativus] gi|449479411|ref|XP_004155592.1| PREDICTED: cell number regulator 5-like [Cucumis sativus]

 Score =  313 bits (801), Expect = 6e-83,   Method: Compositional matrix adjust.
 Identities = 148/221 (66%), Positives = 177/221 (80%), Gaps = 4/221 (1%)

Query: 15  EEESLLEGMAVVNFDVLCSTVALQTQGKWRTPEGDGADVNMDGGEFGAVLRMWEGEVLDC 74
           EE+ LL+G+ +++FD+LCSTVA+QTQGKW  P  D         EFG V RMWEGE+LDC
Sbjct: 21  EEDKLLDGVTLLDFDMLCSTVAMQTQGKW--PNLDTTQDPATAPEFGGVFRMWEGELLDC 78

Query: 75  FDDRPIALQSACCPCYRFGKNMRRAGFGYCFVQGSAYFILAIGAIMNFIAFIVTRRHCFL 134
           +DDR IA++SACCPC+RFGKNM RAGFG CF+QG+ Y  LA+GA+ NFIAF+VT+ H FL
Sbjct: 79  YDDRRIAIESACCPCHRFGKNMGRAGFGSCFLQGTVYLALALGALCNFIAFLVTKHHYFL 138

Query: 135 YLAMAFFISIGGYLGFLRTQMRKKFNILGSDSSMDDCIYHLVCPCCTLCQEARTLEMNNV 194
           Y A+AF IS   YLGF RTQMR+KFNI G D+S+DDCIYHL+CPCC L QE+RTLEMNNV
Sbjct: 139 YSAIAFTISTVTYLGFFRTQMRRKFNIRGGDNSLDDCIYHLICPCCALSQESRTLEMNNV 198

Query: 195 QDGTWHGRGDTICIGSYSEGNRDFFKLHQP-PVSTKWPERC 234
           QDGTWHGRGDTICIGSY + +R F +L+ P PVSTK PE C
Sbjct: 199 QDGTWHGRGDTICIGSYGDASR-FVELNPPLPVSTKLPEAC 238

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|363806906|ref|NP_001242047.1| uncharacterized protein LOC100806189 [Glycine max] gi|255638959|gb|ACU19781.1| unknown [Glycine max]

 Score =  308 bits (788), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 150/251 (59%), Positives = 195/251 (77%), Gaps = 8/251 (3%)

Query: 1   MAETDRQQEKAGGEE-EESLLEGMAVVNFDVLCSTVALQT-QGKW------RTPEGDGAD 52
           M + +++QE+A  EE +E L+EG+AV++FD+LCSTVAL+   GKW         E +  +
Sbjct: 1   MGDLEKKQERAMEEEVKERLVEGVAVLDFDMLCSTVALRAAHGKWGKLGAEEEEEEEEEE 60

Query: 53  VNMDGGEFGAVLRMWEGEVLDCFDDRPIALQSACCPCYRFGKNMRRAGFGYCFVQGSAYF 112
              +GGEFG VLRMWEGEVLDCFDD  IA++S CCPCYRFGKNM+RAGFG C++Q + YF
Sbjct: 61  EKEEGGEFGGVLRMWEGEVLDCFDDHRIAIESTCCPCYRFGKNMKRAGFGSCYIQAAIYF 120

Query: 113 ILAIGAIMNFIAFIVTRRHCFLYLAMAFFISIGGYLGFLRTQMRKKFNILGSDSSMDDCI 172
           +LA+GA +NFIAF VTRRHC+LYL +AF +S+G YLGF RT++RKKFNI+GSDSSMDDC+
Sbjct: 121 LLAVGAFLNFIAFAVTRRHCYLYLTVAFVVSVGAYLGFFRTRLRKKFNIMGSDSSMDDCV 180

Query: 173 YHLVCPCCTLCQEARTLEMNNVQDGTWHGRGDTICIGSYSEGNRDFFKLHQPPVSTKWPE 232
           YH  CPCCTLCQE+RTLEMNNV+DGTWHGRGD +CIG +S+ ++ FF+L+ P + +   E
Sbjct: 181 YHFACPCCTLCQESRTLEMNNVRDGTWHGRGDKMCIGGFSQKSKGFFELNPPSIVSVNDE 240

Query: 233 RCIMQKSRDVV 243
             +  K+   V
Sbjct: 241 SSLETKTNTNV 251

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356549427|ref|XP_003543095.1| PREDICTED: cell number regulator 5-like [Glycine max]

 Score =  301 bits (772), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 150/245 (61%), Positives = 184/245 (75%), Gaps = 9/245 (3%)

Query: 1   MAETDRQQEKAGGEEEESLLEGMAVVNFDVLCSTVALQT-QGKWRTPEGDGADVNMDGGE 59
           + + +R +E A GE+E  LLEGMAV++FD+LCS+VALQ+  G W    G   D    GG 
Sbjct: 4   LEKQERVEEDAEGEKER-LLEGMAVLDFDMLCSSVALQSSHGSWGKLGGGDGDEEQQGG- 61

Query: 60  FGAVLRMWEGEVLDCFDDRPIALQSACCPCYRFGKNMRRAGFGYCFVQGSAYFILAIGAI 119
              VLRMWEGE+LDCFDDR IA +SACCPCYRFGKNM+ AGFG C++Q   YF+LAIGA 
Sbjct: 62  ---VLRMWEGELLDCFDDRRIAFESACCPCYRFGKNMKLAGFGSCYIQAIVYFLLAIGAF 118

Query: 120 MNFIAFIVTRRHCFLYLAMAFFISIGGYLGFLRTQMRKKFNILGSDSSMDDCIYHLVCPC 179
           +  IA+ +TR H FLYLA+AF I++G YLGF RT+MRKKFNI GSDSS+DD +YH VCPC
Sbjct: 119 VTSIAYTITRTHYFLYLAVAFIIAVGAYLGFYRTRMRKKFNIKGSDSSLDDFVYHFVCPC 178

Query: 180 CTLCQEARTLEMNNVQDGTWHGRGDTICIGSYSEGNRDFFKLHQPPVSTKWP--ERCIMQ 237
           CTLCQE+RTLEMNNVQ+GTWHGRGDTICIG + + ++   +L  P V +  P  E C M+
Sbjct: 179 CTLCQESRTLEMNNVQNGTWHGRGDTICIGGFRDESKALCELRPPSVVSIMPNDENC-ME 237

Query: 238 KSRDV 242
           KS DV
Sbjct: 238 KSTDV 242

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224078770|ref|XP_002305621.1| predicted protein [Populus trichocarpa] gi|222848585|gb|EEE86132.1| predicted protein [Populus trichocarpa]

 Score =  296 bits (759), Expect = 4e-78,   Method: Compositional matrix adjust.
 Identities = 145/232 (62%), Positives = 174/232 (75%), Gaps = 9/232 (3%)

Query: 20  LEGMAVVNFDVLCSTVALQTQGK-WRTPE-------GDGADVNMDGGEFGAVLRMWEGEV 71
           +EGM+V++FD+LCSTVA+QTQGK W   E       GD    N   G  G   RMWEGEV
Sbjct: 1   MEGMSVLDFDMLCSTVAMQTQGKYWAKLESKEEEEEGDLRHYNNGVGGGGGGFRMWEGEV 60

Query: 72  LDCFDDRPIALQSACCPCYRFGKNMRRAGFGYCFVQGSAYFILAIGAIMNFIAFIVTRRH 131
           LDCFDD  IA++S CCPCYRFGKNMRR GFG CF+QG  Y+  A  A+++F+AFIVT+  
Sbjct: 61  LDCFDDCRIAIESLCCPCYRFGKNMRRTGFGSCFLQGVVYYAFAFSALLSFVAFIVTKHL 120

Query: 132 CFLYLAMAFFISIGGYLGFLRTQMRKKFNILGSDSSMDDCIYHLVCPCCTLCQEARTLEM 191
            FLY ++A    IG YLGF RTQM+KKFNI GSDSS+DDC+YHL+C CC+L QE+RTLEM
Sbjct: 121 YFLYFSVAITFFIGMYLGFFRTQMKKKFNIRGSDSSLDDCVYHLICSCCSLSQESRTLEM 180

Query: 192 NNVQDGTWHGRGDTICIGSYSEGNRDFFKLHQPP-VSTKWPERCIMQKSRDV 242
           NNVQDG WHGRGDTIC+GSYSEGN+ F +LH P  V+ K P+ C MQKS D+
Sbjct: 181 NNVQDGIWHGRGDTICVGSYSEGNKVFLELHPPSAVAAKSPDICSMQKSTDL 232

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297843966|ref|XP_002889864.1| hypothetical protein ARALYDRAFT_471274 [Arabidopsis lyrata subsp. lyrata] gi|297335706|gb|EFH66123.1| hypothetical protein ARALYDRAFT_471274 [Arabidopsis lyrata subsp. lyrata]

 Score =  285 bits (729), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 129/205 (62%), Positives = 160/205 (78%), Gaps = 1/205 (0%)

Query: 22  GMAVVNFDVLCSTVALQTQGKWRTPEGDGADVNMDGGEFGAVLRMWEGEVLDCFDDRPIA 81
           G++V++FD+LCSTVALQTQGKWR  E    +   +    G VLR+WEG+V+DCF+DR + 
Sbjct: 42  GISVLDFDLLCSTVALQTQGKWRKLESSEGEDATEDDYGGGVLRLWEGDVMDCFEDRHLC 101

Query: 82  LQSACCPCYRFGKNMRRAGFGYCFVQGSAYFILAIGAIMNFIAFIVTRRHCFLYLAMAFF 141
           ++SACCPCYRFGKNM R GFG CF+QG+ + IL  G + N  AF VT+RHCFLYLA+AF 
Sbjct: 102 IESACCPCYRFGKNMTRTGFGSCFLQGAVHMILIAGFLFNVAAFAVTKRHCFLYLAIAFV 161

Query: 142 ISIGGYLGFLRTQMRKKFNILGSDSSMDDCIYHLVCPCCTLCQEARTLEMNNVQDGTWHG 201
           + IG YLGF R Q+R+KFNI G+DS +DDCI+HL+CP CTL QE++TLEMNNV DG WHG
Sbjct: 162 LLIGSYLGFFRMQIRRKFNIRGTDSFLDDCIHHLICPFCTLTQESKTLEMNNVHDGIWHG 221

Query: 202 RGDTICIGSYSEGNRDFFKLHQPPV 226
           RGDT+CIG Y EG + F KLH PPV
Sbjct: 222 RGDTLCIGGYPEG-KAFLKLHSPPV 245

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357475975|ref|XP_003608273.1| hypothetical protein MTR_4g091550 [Medicago truncatula] gi|124359681|gb|ABD32347.2| Uncharacterized Cys-rich domain [Medicago truncatula] gi|355509328|gb|AES90470.1| hypothetical protein MTR_4g091550 [Medicago truncatula]

 Score =  285 bits (728), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 137/220 (62%), Positives = 166/220 (75%), Gaps = 4/220 (1%)

Query: 24  AVVNFDVLCSTVALQ-TQGKWRTPEGDGADVNMDGGEFGAVLRMWEGEVLDCFDDRPIAL 82
           AV++FDVLCS+VAL+ +QGKW    G   +   + G FG VLRMWEGE+ DCFD R IAL
Sbjct: 31  AVLDFDVLCSSVALKASQGKW-GKLGSMEEEEEESGVFGGVLRMWEGELFDCFDHRRIAL 89

Query: 83  QSACCPCYRFGKNMRRAGFGYCFVQGSAYFILAIGAIMNFIAFIVTRRHCFLYLAMAFFI 142
           +S  CPCYRFGKNM+RAGFG CF+Q + Y ILAIG  +NFIAF VTRRHCFLYLA++F I
Sbjct: 90  ESIICPCYRFGKNMKRAGFGSCFIQATIYLILAIGFFVNFIAFAVTRRHCFLYLAVSFII 149

Query: 143 SIGGYLGFLRTQMRKKFNILGSDSSMDDCIYHLVCPCCTLCQEARTLEMNNVQDGTWHGR 202
            +G YLG  RT +RKKFNI  S+SS+DDC+YH  CPCCTL QE+RTLEMNNVQ+GTWHGR
Sbjct: 150 CVGAYLGLFRTLIRKKFNIKDSESSLDDCVYHFACPCCTLSQESRTLEMNNVQNGTWHGR 209

Query: 203 GDTICIGSYSEGNRDFFKLHQPPVST--KWPERCIMQKSR 240
           GDT CIG + E ++  F+L  PP+ T     E CI  K++
Sbjct: 210 GDTNCIGGFGEKSKAHFELLPPPIITIKTINESCIETKTK 249

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18391271|ref|NP_563889.1| PLAC8 family protein [Arabidopsis thaliana] gi|21536856|gb|AAM61188.1| unknown [Arabidopsis thaliana] gi|90186232|gb|ABD91492.1| At1g11380 [Arabidopsis thaliana] gi|332190607|gb|AEE28728.1| PLAC8 family protein [Arabidopsis thaliana]

 Score =  281 bits (720), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 128/205 (62%), Positives = 160/205 (78%), Gaps = 1/205 (0%)

Query: 22  GMAVVNFDVLCSTVALQTQGKWRTPEGDGADVNMDGGEFGAVLRMWEGEVLDCFDDRPIA 81
           G++V++FD+LCSTVALQTQGKWR  E    +   +    G VLR+WEG+V+DCF+DR + 
Sbjct: 41  GISVLDFDLLCSTVALQTQGKWRKLESSEGEDATEDDYGGGVLRLWEGDVMDCFEDRHLC 100

Query: 82  LQSACCPCYRFGKNMRRAGFGYCFVQGSAYFILAIGAIMNFIAFIVTRRHCFLYLAMAFF 141
           ++SACCPCYRFGKNM R GFG CF+QG+ + IL  G + N +AF VT+RHCFLYLA+AF 
Sbjct: 101 IESACCPCYRFGKNMTRTGFGSCFLQGAVHMILIAGFLFNVVAFAVTKRHCFLYLAIAFV 160

Query: 142 ISIGGYLGFLRTQMRKKFNILGSDSSMDDCIYHLVCPCCTLCQEARTLEMNNVQDGTWHG 201
           + IG YLGF R  +R+KFNI G+DS +DD I+HLVCP CTL QE++TLEMNNV DG WHG
Sbjct: 161 LLIGSYLGFFRMLIRRKFNIRGTDSFLDDFIHHLVCPFCTLTQESKTLEMNNVHDGIWHG 220

Query: 202 RGDTICIGSYSEGNRDFFKLHQPPV 226
           RGDT+CIG YSEG + F +LH PPV
Sbjct: 221 RGDTLCIGGYSEG-KAFLELHSPPV 244

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	251
TAIR|locus:2200081	254	AT1G11380 "AT1G11380" [Arabido	0.804	0.795	0.634	5.3e-72
TAIR|locus:2037458	190	AT1G52200 "AT1G52200" [Arabido	0.266	0.352	0.380	1.3e-11
TAIR|locus:2095002	133	AT3G18470 "AT3G18470" [Arabido	0.191	0.360	0.411	9.3e-11
TAIR|locus:2085502	563	AT3G10980 "AT3G10980" [Arabido	0.486	0.216	0.348	6.4e-09
TAIR|locus:2026910	160	PCR11 "AT1G68610" [Arabidopsis	0.262	0.412	0.342	1.2e-08
TAIR|locus:505006313	190	AT2G40935 "AT2G40935" [Arabido	0.498	0.657	0.296	1.5e-08
ASPGD|ASPL0000061958	131	AN0759 [Emericella nidulans (t	0.223	0.427	0.366	1.6e-08
TAIR|locus:2153544	526	AT5G05350 "AT5G05350" [Arabido	0.486	0.231	0.340	1e-07
UNIPROTKB|B6TYV8	181	CNR2 "Cell number regulator 2"	0.207	0.287	0.381	1.2e-06
TAIR|locus:2006767	151	PCR1 "AT1G14880" [Arabidopsis	0.274	0.456	0.301	6.1e-06

TAIR|locus:2200081 AT1G11380 "AT1G11380" [Arabidopsis thaliana (taxid:3702)]

 Score = 728 (261.3 bits), Expect = 5.3e-72, P = 5.3e-72
 Identities = 130/205 (63%), Positives = 161/205 (78%)

Query:    23 MAVVNFDVLCSTVALQTQGKWRTPEG-DGADVNMDGGEFGAVLRMWEGEVLDCFDDRPIA 81
             ++V++FD+LCSTVALQTQGKWR  E  +G D   D    G VLR+WEG+V+DCF+DR + 
Sbjct:    42 ISVLDFDLLCSTVALQTQGKWRKLESSEGEDATEDDYG-GGVLRLWEGDVMDCFEDRHLC 100

Query:    82 LQSACCPCYRFGKNMRRAGFGYCFVQGSAYFILAIGAIMNFIAFIVTRRHCFLYLAMAFF 141
             ++SACCPCYRFGKNM R GFG CF+QG+ + IL  G + N +AF VT+RHCFLYLA+AF 
Sbjct:   101 IESACCPCYRFGKNMTRTGFGSCFLQGAVHMILIAGFLFNVVAFAVTKRHCFLYLAIAFV 160

Query:   142 ISIGGYLGFLRTQMRKKFNILGSDSSMDDCIYHLVCPCCTLCQEARTLEMNNVQDGTWHG 201
             + IG YLGF R  +R+KFNI G+DS +DD I+HLVCP CTL QE++TLEMNNV DG WHG
Sbjct:   161 LLIGSYLGFFRMLIRRKFNIRGTDSFLDDFIHHLVCPFCTLTQESKTLEMNNVHDGIWHG 220

Query:   202 RGDTICIGSYSEGNRDFFKLHQPPV 226
             RGDT+CIG YSEG + F +LH PPV
Sbjct:   221 RGDTLCIGGYSEG-KAFLELHSPPV 244

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2037458 AT1G52200 "AT1G52200" [Arabidopsis thaliana (taxid:3702)]

 Score = 135 (52.6 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
 Identities = 27/71 (38%), Positives = 43/71 (60%)

Query:   133 FLYLAMAFFISIGGYLGF-LRTQMRKKFNILGSDSSMDDCIYHLVCPCCTLCQEARTLEM 191
             F+YL M   +     +G   R +MR+KFN++  ++   DC  H++CPCC+LCQE R L++
Sbjct:    97 FMYLLMMPALCSHWVMGSKYREKMRRKFNLV--EAPYSDCASHVLCPCCSLCQEYRELKI 154

Query:   192 NNVQDGT-WHG 201
              N+     W+G
Sbjct:   155 RNLDPSLGWNG 165

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006979 "response to oxidative stress" evidence=RCA;IMP

GO:0006569 "tryptophan catabolic process" evidence=RCA

GO:0006865 "amino acid transport" evidence=RCA

GO:0009611 "response to wounding" evidence=RCA

GO:0009684 "indoleacetic acid biosynthetic process" evidence=RCA

GO:0010167 "response to nitrate" evidence=RCA

GO:0015706 "nitrate transport" evidence=RCA

GO:0030003 "cellular cation homeostasis" evidence=RCA

GO:0070838 "divalent metal ion transport" evidence=RCA

TAIR|locus:2095002 AT3G18470 "AT3G18470" [Arabidopsis thaliana (taxid:3702)]

 Score = 106 (42.4 bits), Expect = 9.3e-11, Sum P(2) = 9.3e-11
 Identities = 21/51 (41%), Positives = 28/51 (54%)

Query:   152 RTQMRKKFNILGSDSSMDDCIYHLVCPCCTLCQEARTLEMNNVQDGT-WHG 201
             RT++R KF +  S +S  DC+ H  C CC LCQE R L+   +     W G
Sbjct:    69 RTKIRSKFGLPESPTS--DCVTHFFCECCALCQEHRELKTRGLDPSIGWSG 117

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2085502 AT3G10980 "AT3G10980" [Arabidopsis thaliana (taxid:3702)]

 Score = 156 (60.0 bits), Expect = 6.4e-09, P = 6.4e-09
 Identities = 46/132 (34%), Positives = 62/132 (46%)

Query:    67 WEGEVLDCFDDRPIALQSACCPCYRFGKNMRRAGFGYCFVQGSAY--FILAIGAIMNFIA 124
             W G +LD +DD  +A  S  C    FG NM R GFG  +V  + +  F LA   I N  A
Sbjct:   336 WSGGILDIWDDISLAYLSLFCTFCVFGWNMERVGFGNMYVHIATFILFCLAPFFIFNLAA 395

Query:   125 FIVTRRHCFLYLAMA-FFISIGGYL--GFLRTQMRKKF-----NILGSDSSMDDCIYHLV 176
               +        L ++   + + G L  GF R QMRK+F     N     +++ DC   L 
Sbjct:   396 VNIDNETVREALGISGILLCVFGLLYGGFWRIQMRKRFKLPSYNFCFGRAAIADCALWLC 455

Query:   177 CPCCTLCQEART 188
             C  C+L QE RT
Sbjct:   456 CCWCSLAQEVRT 467

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:2026910 PCR11 "AT1G68610" [Arabidopsis thaliana (taxid:3702)]

 Score = 107 (42.7 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
 Identities = 25/73 (34%), Positives = 35/73 (47%)

Query:   134 LYLAMAFFISIGG---YLGFLRTQMRKKFNILGSDSSMDDCIYHLVCPCCTLCQEARTLE 190
             +Y+ +      GG   Y  F RT++R ++N+   +    DC  H  C  C LCQE R L+
Sbjct:    64 MYMIIFMLTGYGGSSLYSCFYRTKLRAQYNL--KERPCCDCCVHFCCEPCALCQEYRQLQ 121

Query:   191 MNNVQDGT--WHG 201
              N   D    WHG
Sbjct:   122 HNRDLDLVIGWHG 134

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0048235 "pollen sperm cell differentiation" evidence=IEP

TAIR|locus:505006313 AT2G40935 "AT2G40935" [Arabidopsis thaliana (taxid:3702)]

 Score = 137 (53.3 bits), Expect = 1.5e-08, P = 1.5e-08
 Identities = 40/135 (29%), Positives = 54/135 (40%)

Query:    65 RMWEGEVLDCFDDRPIALQSACCPCYRFGKNMRRAGFGYCFVQGSAYFILAIGAIMNFIA 124
             R W   +  CFDD         CPCY FGKN    G G  F  G         A++N I 
Sbjct:    45 RQWSSGICACFDDMQSCCVGLFCPCYIFGKNAELLGSG-TFA-GPCLTHCISWALVNTIC 102

Query:   125 FIVTRRHCFLYLAMAFFISIGGYLGFLRTQMRKKFNILGSDSSMDDCIYHLVCPCCTLCQ 184
                T     L L   F   +  Y    R  +R K+N+   ++   D + H  C  C +CQ
Sbjct:   103 CFATNG-ALLGLPGCF---VSCYACGYRKSLRAKYNL--QEAPCGDFVTHFFCHLCAICQ 156

Query:   185 EARTLEMNNVQDGTW 199
             E R  E+     G++
Sbjct:   157 EYR--EIREQSSGSY 169

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0006661 "phosphatidylinositol biosynthetic process" evidence=RCA

ASPGD|ASPL0000061958 AN0759 [Emericella nidulans (taxid:162425)]

 Score = 93 (37.8 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
 Identities = 22/60 (36%), Positives = 32/60 (53%)

Query:   132 CFLYLAMAFFISIGGYLGFL-RTQMRKKFNILGSDSSMDDCIYHLVCPCCTLCQEARTLE 190
             C L++ +A    +   L  + R  MR+KF I GS    +DCI    CPCC L Q+ + L+
Sbjct:    52 CCLFV-LANCCGLAWVLSMMKRRDMREKFGIKGSVG--EDCILSCCCPCCVLVQQEKELD 108

GO:0008150 "biological_process" evidence=ND

GO:0005576 "extracellular region" evidence=IDA

GO:0003674 "molecular_function" evidence=ND

TAIR|locus:2153544 AT5G05350 "AT5G05350" [Arabidopsis thaliana (taxid:3702)]

 Score = 146 (56.5 bits), Expect = 1.0e-07, P = 1.0e-07
 Identities = 45/132 (34%), Positives = 60/132 (45%)

Query:    67 WEGEVLDCFDDRPIALQSACCPCYRFGKNMRRAGFGYCFVQGSAY--FILAIGAIMNFIA 124
             W   VLD ++D  +A  S  C    FG NM R GFG  +V  + +  F LA   I N  A
Sbjct:   307 WREGVLDIWEDISLAYLSLFCTFCLFGWNMERIGFGNMYVHIATFVLFCLAPFFIFNLAA 366

Query:   125 FIVTR---RHCFLYLAMAFFISIGGYLGFLRTQMRKKFNILGSD-----SSMDDCIYHLV 176
               +     R    Y  +   +    Y GF R QMRK+F + G +      ++ DC   L 
Sbjct:   367 INIDNEMVRDALGYTGIVLCLFGLLYGGFWRIQMRKRFKLPGYNICCGRPAIADCTLWLF 426

Query:   177 CPCCTLCQEART 188
             C  C+L QE RT
Sbjct:   427 CCWCSLAQEVRT 438

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|B6TYV8 CNR2 "Cell number regulator 2" [Zea mays (taxid:4577)]

 Score = 97 (39.2 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
 Identities = 21/55 (38%), Positives = 26/55 (47%)

Query:   147 YLGFLRTQMRKKFNILGSDSSMDDCIYHLVCPCCTLCQEARTLEMNNVQDGT-WH 200
             Y  F R +MR ++ +  S  S  DC  H  C CC LCQE R L+         WH
Sbjct:   106 YSCFYRAKMRAQYGLQVSPCS--DCCVHCCCQCCALCQEYRELKKRGFDMSIGWH 158

GO:0008285 "negative regulation of cell proliferation" evidence=IMP

TAIR|locus:2006767 PCR1 "AT1G14880" [Arabidopsis thaliana (taxid:3702)]

 Score = 84 (34.6 bits), Expect = 6.1e-06, Sum P(2) = 6.1e-06
 Identities = 22/73 (30%), Positives = 32/73 (43%)

Query:   134 LYLAMAFFISIGG-YLGFLRTQMRKKFNILGSDSSMDDCIYHLVCPCCTLCQEARTLEMN 192
             LY+ +    S G  Y  F   +MR ++NI G   +  DC+ H  C  C L Q+ R L+  
Sbjct:    60 LYMLIDLITSCGRMYACFYSGKMRAQYNIKGDGCT--DCLKHFCCNLCALTQQYRELKHR 117

Query:   193 NVQDGT-WHGRGD 204
                    W G  +
Sbjct:   118 GFDMSLGWAGNAE 130

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005773 "vacuole" evidence=IDA

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: estExt_Genewise1_v1.C_LG_XI2194 hypothetical protein (235 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	251
TIGR01571	104	TIGR01571, A_thal_Cys_rich, uncharacterized Cys-ri	6e-23
pfam04749	99	pfam04749, PLAC8, PLAC8 family	5e-22

>gnl|CDD|233473 TIGR01571, A_thal_Cys_rich, uncharacterized Cys-rich domain

 Score = 89.4 bits (222), Expect = 6e-23
 Identities = 37/130 (28%), Positives = 51/130 (39%), Gaps = 29/130 (22%)

Query: 65  RMWEGEVLDCFDDRPIALQSACCPCYRFGKNMRRAG--FGYCFVQGSAYFILAIGAIMNF 122
             W   + DC +D  + L    CPC  FG+     G   G C                  
Sbjct: 1   SNWSTGLFDCCEDIRLCLCGLFCPCCLFGQIAETLGTFAGECLC---------------- 44

Query: 123 IAFIVTRRHCFLYLAMAFFISIGG-YLGFLRTQMRKKFNILGSDSSMDDCIYHLVCPCCT 181
                        +AM+      G Y  F+R ++R+K+ I G  +  DDC+ HL C  C 
Sbjct: 45  --------GGLTAIAMSALCGFCGCYTCFIRIKLREKYGIQG--APCDDCLTHLFCCFCA 94

Query: 182 LCQEARTLEM 191
           LCQE R L+M
Sbjct: 95  LCQEHRELKM 104

This model describes an uncharacterized domain of about 100 residues. It is common in plants but found also in Homo sapiens, Dictyostelium, and Leishmania; at least 12 distinct members are found in Arabidopsis. Most members of this family contain more than 10 per cent Cys, but no Cys residue is invariant across the family. Length = 104

>gnl|CDD|218240 pfam04749, PLAC8, PLAC8 family

 Score = 87.0 bits (216), Expect = 5e-22
 Identities = 41/123 (33%), Positives = 50/123 (40%), Gaps = 24/123 (19%)

Query: 67  WEGEVLDCFDDRPIALQSACCPCYRFGKNMRRAGFGYCFVQGSAYFILAIGAIMNFIAFI 126
           W   + DCFDD         CPC  FG+   R   G     GS                 
Sbjct: 1   WSTGLFDCFDDIGTCCLGLFCPCILFGRTAERLDDGSRSEDGS----------------- 43

Query: 127 VTRRHCFLYLAMAFFISIGGYLGFLRTQMRKKFNILGSDSSMDDCIYHLVCPCCTLCQEA 186
                C LY  +   +    Y  F RT++R+K+NI G  S  DDC+ H  CP C LCQE 
Sbjct: 44  -----CCLYGLLYGLLGFWLYSCFTRTKIREKYNIEG--SPCDDCLVHCFCPPCALCQED 96

Query: 187 RTL 189
           R L
Sbjct: 97  REL 99

This family includes the Placenta-specific gene 8 protein. Length = 99

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	251
TIGR01571	104	A_thal_Cys_rich uncharacterized Cys-rich domain. T	99.97
PF04749	106	PLAC8: PLAC8 family; InterPro: IPR006461 This grou	99.94

>TIGR01571 A_thal_Cys_rich uncharacterized Cys-rich domain

Probab=99.97  E-value=9.6e-31  Score=207.65  Aligned_cols=101  Identities=37%  Similarity=0.777  Sum_probs=86.0

Q ss_pred             cccccccccccCCchhhhhccchhhhhhhHhHHHhCC--cccccchhHHHHHHHhhhhheeeeEeecchhHHHHHHH-HH
Q 025546           65 RMWEGEVLDCFDDRPIALQSACCPCYRFGKNMRRAGF--GYCFVQGSAYFILAIGAIMNFIAFIVTRRHCFLYLAMA-FF  141 (251)
Q Consensus        65 ~~WstGLfdCfdD~~~C~~a~cCPCv~fG~na~Rlg~--gsC~~~~~~y~ll~~~~l~~l~~~svt~~~c~l~~gl~-~~  141 (251)
                      ++|++||||||+|+++|++++||||+++|+|++|++.  ++|...+++|++                        ++ ++
T Consensus         1 ~~W~~gL~dC~~d~~~C~~~~~CPc~~~g~~~~~~~~~~~~C~~~~~~~~~------------------------~~~~~   56 (104)
T TIGR01571         1 SNWSTGLFDCCEDIRLCLCGLFCPCCLFGQIAETLGTFAGECLCGGLTAIA------------------------MSALC   56 (104)
T ss_pred             CCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHhCCCCCchhhHHHHHHH------------------------HHHHH
Confidence            5899999999999999999999999999999999983  466654422221                        11 22


Q ss_pred             HhhhhhhhHHHHHHHHHcCCCCCCCCccchhhhcCchhHHHHHHHHHHHH
Q 025546          142 ISIGGYLGFLRTQMRKKFNILGSDSSMDDCIYHLVCPCCTLCQEARTLEM  191 (251)
Q Consensus       142 ~~~~iy~~~~R~~IR~KynI~GS~~~~~Dc~~~~cC~~CaLcQe~RELk~  191 (251)
                      ++.++|.+.+|++||+||||+|+  .++|+++++||+||++|||+||||+
T Consensus        57 ~~~~~~~~~~R~~~R~ry~i~gs--~~~D~~~~~~C~~C~lcQ~~RElk~  104 (104)
T TIGR01571        57 GFCGCYTCFIRIKLREKYGIQGA--PCDDCLTHLFCCFCALCQEHRELKM  104 (104)
T ss_pred             hHHHHHHHHHHHHHHHHhCCCCC--CcccchHHHHhhhHHHHHHHHHHhC
Confidence            35678889999999999999999  9999999999999999999999984

This model describes an uncharacterized domain of about 100 residues. It is common in plants but found also in Homo sapiens, Dictyostelium, and Leishmania; at least 12 distinct members are found in Arabidopsis. Most members of this family contain more than 10 per cent Cys, but no Cys residue is invariant across the family.

>PF04749 PLAC8: PLAC8 family; InterPro: IPR006461 This group of sequences are described by a region of about 170 amino acids

Probab=99.94  E-value=3.5e-27  Score=183.76  Aligned_cols=102  Identities=36%  Similarity=0.638  Sum_probs=79.3

Q ss_pred             cccccccccCCchhhhhccchhhhhhhHhHHHhCCcccccchhHHHHHHHhhhhheeeeEeecchhHH----HHHHHHHH
Q 025546           67 WEGEVLDCFDDRPIALQSACCPCYRFGKNMRRAGFGYCFVQGSAYFILAIGAIMNFIAFIVTRRHCFL----YLAMAFFI  142 (251)
Q Consensus        67 WstGLfdCfdD~~~C~~a~cCPCv~fG~na~Rlg~gsC~~~~~~y~ll~~~~l~~l~~~svt~~~c~l----~~gl~~~~  142 (251)
                      |++||||||+|+++|++++||||+++|+|++|++.++...+..                   .+.|.+    +....++.
T Consensus         1 W~~gl~~C~~d~~~c~~~~~cPc~~~~~~~~~l~~~~~~~~~~-------------------~~~C~~~~~~~~~~~~~~   61 (106)
T PF04749_consen    1 WSTGLCDCFSDPGSCCLACFCPCCSFGQNAERLGDGPRSRGPA-------------------FGSCCLCFCCFGCAACLG   61 (106)
T ss_pred             CCCCCCCcCCChHHHHHHHHHHHHHHHHHHHHhccCCccCCCC-------------------CccHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999998643221100                   000111    11111012


Q ss_pred             hhhhhhhHHHHHHHHHcCCCCCCCCccchhhhcCchhHHHHHHHHHH
Q 025546          143 SIGGYLGFLRTQMRKKFNILGSDSSMDDCIYHLVCPCCTLCQEARTL  189 (251)
Q Consensus       143 ~~~iy~~~~R~~IR~KynI~GS~~~~~Dc~~~~cC~~CaLcQe~REL  189 (251)
                      +.++|++.+|++||+||||+|+  .++||++++||+||||+||+|||
T Consensus        62 l~~~~~~~~R~~iR~ry~I~g~--~~~D~~~~~~C~~Cal~Q~~rEl  106 (106)
T PF04749_consen   62 LGWCYGCSLRQQIRERYGIQGS--CCEDCCCSCCCPPCALCQEAREL  106 (106)
T ss_pred             HhHhhhhhHHHHHHHHhCCCCC--ChhhhHHHHHHHHHHHHHHHhhC
Confidence            2455789999999999999999  99999999999999999999996

These proteins have highly divergent N-terminal regions rich in low complexity sequence. PSI-BLAST reveals no clear similarity to any characterised protein. It is common in plants but found also in Homo sapiens (Human), Dictyostelium, and Leishmania; at least 12 distinct members are found in Arabidopsis. Most members of this family contain more than 10 per cent Cys, but no Cys residue is invariant across the family.

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00