Citrus Sinensis ID: 025573

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250
Protein Sequence
MGTNPYQSHLVSASTHLHRSSILPLHGLKQVLPYFRASKLRLGANRNGPLWNAKGNICCAMNMAAGQSGDPEKLNLDQLVNRVRKLWDNSPQPVKSFPWNRALENFIQLILDLFMAVVKYLSVPLLAVSSLSEMSYCAHEKKLFLVPVPLLIGMAISDLLRETILDLSPLLKDAEVPWHLIAIGIFFTVIKLPGPYYPYWGRLFIPHFANGALWRTLWFAFLWYRKPKKASEATPSNDSVNTGLSEPNKL
Secondary Structure (PSIPRED)
cccccccccEEEcccccccccccccccccccccccccccEEEccccccccccccccccEEEEcccccccccccccHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEccEEEEEEHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHHHccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccccEEcccccccccccccccccccccccccccccEccccccccccccccccEEEEEEEcccccccccccHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccEEEccHHHHHHHHHHHHHHHHHHHHcHHHHcccccHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccEcccccccccc
Coil and Loop (DISEMBL)
MGTNPYQSHLVSAsthlhrssilplhglkqvLPYFRASKlrlganrngplwnakgniccamnmaagqsgdpeklnLDQLVNRVRKlwdnspqpvksfpwnRALENFIQLILDLFMAVVKYLSVPLLAVSSLSEMSYCAHEKKLFLVPVPLLIGMAISDLLRETILDlspllkdaevpwHLIAIGIFFTviklpgpyypywgrlfiphfanGALWRTLWFAFLWyrkpkkaseatpsndsvntglsepnkl
Flexible Loop (DISEMBL)
MGTNPYQSHLVSASTHLHRSSILPLHGLKQVLPYFRASKLRLGANRNGPLWNAKGNICCAMNMAAGQSGDPEKLNLDQLVNRVRKlwdnspqpvksfpwNRALENFIQLILDLFMAVVKYLSVPLLAVSSLSEMSYCAHEKKLFLVPVPLLIGMAISDLLRETILDLSPLLKDAEVPWHLIAIGIFFTVIKLPGPYYPYWGRLFIPHFANGALWRTLWFAFLWYRKPKkaseatpsndsvntglsepnkl
Low Complexity Region (SEG)
MGTNPYQSHLVSASTHLHRSSILPLHGLKQVLPYFRASKLRLGANRNGPLWNAKGNICCAMNMAAGQSGDPEKLNLDQLVNRVRKLWDNSPQPVKSFPWNRALENFIQLILDLFMAVVKYlsvpllavsslsEMSYCAHEKKLFLVPVPLLIGMAISDLLRETILDLSPLLKDAEVPWHLIAIGIFFTVIKLPGPYYPYWGRLFIPHFANGALWRTLWFAFLWYRKPKKASEATPSNDSVNTGLSEPNKL
Disordered region (IsUnstruct)
****************LHRSSILPLHGLKQVLPYFRASKLRLGANRNGPLWNAKGNICCAMNMAA********LNLDQLVNRVRKLWDNSPQPVKSFPWNRALENFIQLILDLFMAVVKYLSVPLLAVSSLSEMSYCAHEKKLFLVPVPLLIGMAISDLLRETILDLSPLLKDAEVPWHLIAIGIFFTVIKLPGPYYPYWGRLFIPHFANGALWRTLWFAFLWYR*************************
Disordered Region (DISOPRED)
*****YQ**LV*********************************************I*********************LVNRVRKLWDNSPQPVKSFPWNRALENFIQLILDLFMAVVKYLSVPLLAVSSLSEMSYCAHEKKLFLVPVPLLIGMAISDLLRETILDLSPLLKDAEVPWHLIAIGIFFTVIKLPGPYYPYWGRLFIPHFANGALWRTLWFAFLW***************************
Disordered Region (DISEMBL)
****************LHRSSILPLHGLKQVLPYFRASKLRLGANRNGPLWNAKGNICCAMNMAAGQSGDPEKLNLDQLVNRVRKLWDNSPQPVKSFPWNRALENFIQLILDLFMAVVKYLSVPLLAVSSLSEMSYCAHEKKLFLVPVPLLIGMAISDLLRETILDLSPLLKDAEVPWHLIAIGIFFTVIKLPGPYYPYWGRLFIPHFANGALWRTLWFAFLWYRKP***********************
Disordered Region (DISPRO)
******************************VL**FRASKLRLGANRNGPLWNAKGNICCAMNMAAGQSGDPEKLNLDQLVNRVRKLWDNSPQPVKSFPWNRALENFIQLILDLFMAVVKYLSVPLLAVSSLSEMSYCAHEKKLFLVPVPLLIGMAISDLLRETILDLSPLLKDAEVPWHLIAIGIFFTVIKLPGPYYPYWGRLFIPHFANGALWRTLWFAFLWYRKPK**********************
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MGTNPYQSHLVSASTHLHRSSILPLHGLKQVLPYFRASKLRLGANRNGPLWNAKGNICCAMNMAAGQSGDPEKLNLDQLVNRVRKLWDNSPQPVKSFPWNRALENFIQLILDLFMAVVKYLSVPLLAVSSLSEMSYCAHEKKLFLVPVPLLIGMAISDLLRETILDLSPLLKDAEVPWHLIAIGIFFTVIKLPGPYYPYWGRLFIPHFANGALWRTLWFAFLWYRKPKKASEATPSNDSVNTGLSEPNKL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	250
255561651	190	conserved hypothetical protein [Ricinus	0.756	0.994	0.751	2e-79
225428693	253	PREDICTED: uncharacterized protein LOC10	0.972	0.960	0.581	3e-76
297741337	232	unnamed protein product [Vitis vinifera]	0.848	0.913	0.641	3e-75
224123264	231	predicted protein [Populus trichocarpa]	0.88	0.952	0.653	5e-74
356575152	240	PREDICTED: uncharacterized protein LOC10	0.884	0.920	0.575	9e-71
449495587	243	PREDICTED: uncharacterized protein LOC10	0.928	0.954	0.551	3e-69
449438691	251	PREDICTED: uncharacterized protein LOC10	0.896	0.892	0.566	2e-68
297847266	237	EMB1273 [Arabidopsis lyrata subsp. lyrat	0.744	0.784	0.641	3e-68
356521213	245	PREDICTED: uncharacterized protein LOC10	0.692	0.706	0.682	1e-66
30694575	240	protein embryo defective 1273 [Arabidops	0.936	0.975	0.552	2e-66

>gi|255561651|ref|XP_002521835.1| conserved hypothetical protein [Ricinus communis] gi|223538873|gb|EEF40471.1| conserved hypothetical protein [Ricinus communis]

 Score =  301 bits (771), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 142/189 (75%), Positives = 163/189 (86%)

Query: 61  MNMAAGQSGDPEKLNLDQLVNRVRKLWDNSPQPVKSFPWNRALENFIQLILDLFMAVVKY 120
           MN+AAGQSGDPEKLN+D ++++ R LWD SPQPVK FPWNRALENFIQLILDL +AVVKY
Sbjct: 1   MNVAAGQSGDPEKLNVDHIIDKARNLWDTSPQPVKRFPWNRALENFIQLILDLVVAVVKY 60

Query: 121 LSVPLLAVSSLSEMSYCAHEKKLFLVPVPLLIGMAISDLLRETILDLSPLLKDAEVPWHL 180
           L VPLLAVSSLSEMSYCAH KKL  VP+PLLIG+ ++ +L+ET L+LSPLLKDAEVPWHL
Sbjct: 61  LCVPLLAVSSLSEMSYCAHHKKLSFVPLPLLIGIVVAGILKETALELSPLLKDAEVPWHL 120

Query: 181 IAIGIFFTVIKLPGPYYPYWGRLFIPHFANGALWRTLWFAFLWYRKPKKASEATPSNDSV 240
           IAI IFF++IKLPGPYYPYWGR+FIPHFANG LWRT+W AFLWYRKP+KAS++    DSV
Sbjct: 121 IAIAIFFSLIKLPGPYYPYWGRIFIPHFANGVLWRTIWSAFLWYRKPRKASQSMLKQDSV 180

Query: 241 NTGLSEPNK 249
               S  NK
Sbjct: 181 IGSNSGTNK 189

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225428693|ref|XP_002284957.1| PREDICTED: uncharacterized protein LOC100250293 [Vitis vinifera]

 Score =  290 bits (743), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 147/253 (58%), Positives = 179/253 (70%), Gaps = 10/253 (3%)

Query: 3   TNPYQSHLVSASTHLHRSSILPLHGLKQVLP-------YFRASKLRLGANRNGPLWNAKG 55
           ++ Y +H  +AST    SS + L      L        Y + +   L    NG   NA+ 
Sbjct: 2   SSTYPTHFFTASTPRRPSSEMSLGTHSPFLSKFEGLSWYTKTNGCILSFKPNGQFQNARS 61

Query: 56  NICCAMNMAAGQSGDPEKLNLDQLVNRVRKLWDNSPQPVKSFPWNRALENFIQLILDLFM 115
           N+   + + AG SGDPEKLNLD ++ + R LWD+SPQPVKSFPWNR LENFIQLILDL +
Sbjct: 62  NLLSKIKVTAGHSGDPEKLNLDAIIEKARTLWDSSPQPVKSFPWNRTLENFIQLILDLTL 121

Query: 116 AVVKYLSVPLLAVSSLSEMSYCAHEKKLFLVPVPLLIGMAISDLLRETILDLSPLLKDAE 175
           AV+KYL  PLLAVSSLSEMSYCA+EKKLFLVP+PLLIG+ ++ LL++  L+LSP+LKDAE
Sbjct: 122 AVIKYLCAPLLAVSSLSEMSYCANEKKLFLVPIPLLIGIVVAGLLKDAALELSPVLKDAE 181

Query: 176 VPWHLIAIGIFFTVIKLPGPYYPYWGRLFIPHFANGALWRTLWFAFLWYRKPKKASEATP 235
           V WHLIAI IFFT++KLPGPYYPYWGR+FIPHFANG L RTLW  FLWYR+P+   E   
Sbjct: 182 VAWHLIAIAIFFTLLKLPGPYYPYWGRIFIPHFANGGLLRTLWSVFLWYRRPR---ETLL 238

Query: 236 SNDSVNTGLSEPN 248
              S+N   S PN
Sbjct: 239 QRKSLNGSGSVPN 251

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297741337|emb|CBI32468.3| unnamed protein product [Vitis vinifera]

 Score =  287 bits (734), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 138/215 (64%), Positives = 165/215 (76%), Gaps = 3/215 (1%)

Query: 34  YFRASKLRLGANRNGPLWNAKGNICCAMNMAAGQSGDPEKLNLDQLVNRVRKLWDNSPQP 93
           Y + +   L    NG   NA+ N+   + + AG SGDPEKLNLD ++ + R LWD+SPQP
Sbjct: 19  YTKTNGCILSFKPNGQFQNARSNLLSKIKVTAGHSGDPEKLNLDAIIEKARTLWDSSPQP 78

Query: 94  VKSFPWNRALENFIQLILDLFMAVVKYLSVPLLAVSSLSEMSYCAHEKKLFLVPVPLLIG 153
           VKSFPWNR LENFIQLILDL +AV+KYL  PLLAVSSLSEMSYCA+EKKLFLVP+PLLIG
Sbjct: 79  VKSFPWNRTLENFIQLILDLTLAVIKYLCAPLLAVSSLSEMSYCANEKKLFLVPIPLLIG 138

Query: 154 MAISDLLRETILDLSPLLKDAEVPWHLIAIGIFFTVIKLPGPYYPYWGRLFIPHFANGAL 213
           + ++ LL++  L+LSP+LKDAEV WHLIAI IFFT++KLPGPYYPYWGR+FIPHFANG L
Sbjct: 139 IVVAGLLKDAALELSPVLKDAEVAWHLIAIAIFFTLLKLPGPYYPYWGRIFIPHFANGGL 198

Query: 214 WRTLWFAFLWYRKPKKASEATPSNDSVNTGLSEPN 248
            RTLW  FLWYR+P+   E      S+N   S PN
Sbjct: 199 LRTLWSVFLWYRRPR---ETLLQRKSLNGSGSVPN 230

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224123264|ref|XP_002330273.1| predicted protein [Populus trichocarpa] gi|222871308|gb|EEF08439.1| predicted protein [Populus trichocarpa]

 Score =  283 bits (724), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 149/228 (65%), Positives = 174/228 (76%), Gaps = 8/228 (3%)

Query: 2   GTNPYQSHLVSASTHLHRSSI---LPLH-----GLKQVLPYFRASKLRLGANRNGPLWNA 53
            T  Y SHL+SAS HL  ++      LH     G ++   Y +A    LG   +G     
Sbjct: 3   ATITYPSHLLSASFHLRTTTTKNAFRLHSPSTQGPERSPHYLKAGSSHLGVKLSGVFQKT 62

Query: 54  KGNICCAMNMAAGQSGDPEKLNLDQLVNRVRKLWDNSPQPVKSFPWNRALENFIQLILDL 113
           + NI CA+NMAAGQSGDPEK+N D L+N+ RK+WD SPQPVKSFPW RALENFIQLILDL
Sbjct: 63  RLNISCAINMAAGQSGDPEKINFDHLMNKARKIWDRSPQPVKSFPWKRALENFIQLILDL 122

Query: 114 FMAVVKYLSVPLLAVSSLSEMSYCAHEKKLFLVPVPLLIGMAISDLLRETILDLSPLLKD 173
           F+ VVKYL VPLLAVSSLSEMSYCAH+KKL LVP+PLLIG+ ++ +++ET L+LSPLLKD
Sbjct: 123 FVMVVKYLCVPLLAVSSLSEMSYCAHQKKLLLVPIPLLIGIIVAGVVKETALELSPLLKD 182

Query: 174 AEVPWHLIAIGIFFTVIKLPGPYYPYWGRLFIPHFANGALWRTLWFAF 221
           AEVPWHLI   I FT+IKLPGPYYPYWGR+FIPHFANG LWRTL FAF
Sbjct: 183 AEVPWHLIVTAIVFTLIKLPGPYYPYWGRIFIPHFANGVLWRTLLFAF 230

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356575152|ref|XP_003555706.1| PREDICTED: uncharacterized protein LOC100803646 [Glycine max]

 Score =  272 bits (696), Expect = 9e-71,   Method: Compositional matrix adjust.
 Identities = 133/231 (57%), Positives = 165/231 (71%), Gaps = 10/231 (4%)

Query: 8   SHLVSASTHLHRSSIL----------PLHGLKQVLPYFRASKLRLGANRNGPLWNAKGNI 57
           SHL+SA+T   R  +L          P  G K    +F      L             NI
Sbjct: 2   SHLLSAATTFSRFQLLTLNNTFTTQPPFLGFKGTSCFFEKHSCCLSVKPFCASQKRGANI 61

Query: 58  CCAMNMAAGQSGDPEKLNLDQLVNRVRKLWDNSPQPVKSFPWNRALENFIQLILDLFMAV 117
            C+MNM+A QS D  K+ LDQL+++V+KLWD+SP+PVK FP N+AL+NFIQLILDL + V
Sbjct: 62  FCSMNMSAQQSDDHGKMKLDQLIDKVQKLWDSSPEPVKKFPHNKALDNFIQLILDLILVV 121

Query: 118 VKYLSVPLLAVSSLSEMSYCAHEKKLFLVPVPLLIGMAISDLLRETILDLSPLLKDAEVP 177
           VKYL+VP+ AV+SLSEMSYCAHE+KL  VP+P+L G+A++ +L+ET L LSP L+D+EVP
Sbjct: 122 VKYLAVPVFAVTSLSEMSYCAHERKLVFVPLPVLFGVAVAGILKETALQLSPRLRDSEVP 181

Query: 178 WHLIAIGIFFTVIKLPGPYYPYWGRLFIPHFANGALWRTLWFAFLWYRKPK 228
           WHLIAI IFFT+IKLPGPYYPYW R+ IPHFANG L RTL FA LWYR+PK
Sbjct: 182 WHLIAIAIFFTLIKLPGPYYPYWVRIIIPHFANGVLLRTLLFAILWYRRPK 232

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449495587|ref|XP_004159887.1| PREDICTED: uncharacterized protein LOC101228120 [Cucumis sativus]

 Score =  267 bits (683), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 129/234 (55%), Positives = 166/234 (70%), Gaps = 2/234 (0%)

Query: 8   SHLVSASTHLHRSSILPLHGLKQVLPYFRASKLR--LGANRNGPLWNAKGNICCAMNMAA 65
           +HL+S  TH   S  L LH    + P  R+ +    +    +    NA   + CAMNM A
Sbjct: 3   THLLSPPTHFQTSMKLALHAPFLLAPSRRSPECSHVVSLKPHKRFQNAGSVVSCAMNMTA 62

Query: 66  GQSGDPEKLNLDQLVNRVRKLWDNSPQPVKSFPWNRALENFIQLILDLFMAVVKYLSVPL 125
           GQS D  ++N D L NRV++LW++SP+PVKSFPWN AL+NFIQLI DL + V+KYL VPL
Sbjct: 63  GQSDDSGRVNWDSLKNRVKQLWESSPEPVKSFPWNEALDNFIQLIADLILTVIKYLFVPL 122

Query: 126 LAVSSLSEMSYCAHEKKLFLVPVPLLIGMAISDLLRETILDLSPLLKDAEVPWHLIAIGI 185
           L V+SLSEMSYCAHEKKL +VP   +IG ++++++R+T L LSP+LKD EVPWHLI I I
Sbjct: 123 LLVTSLSEMSYCAHEKKLLIVPFLFIIGFSVAEVMRQTALSLSPILKDLEVPWHLITIAI 182

Query: 186 FFTVIKLPGPYYPYWGRLFIPHFANGALWRTLWFAFLWYRKPKKASEATPSNDS 239
           FFT+IKLPGP YPYWGR+F PH ANG L RT+W  FLW+R+P+K S     N++
Sbjct: 183 FFTLIKLPGPSYPYWGRIFFPHLANGGLVRTIWSMFLWFRRPRKTSMLLKHNEN 236

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449438691|ref|XP_004137121.1| PREDICTED: uncharacterized protein LOC101221519 [Cucumis sativus]

 Score =  264 bits (675), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 128/226 (56%), Positives = 161/226 (71%), Gaps = 2/226 (0%)

Query: 8   SHLVSASTHLHRSSILPLHGLKQVLPYFRASKLR--LGANRNGPLWNAKGNICCAMNMAA 65
           +HL+S  TH   S  L LH    + P  R+ +    +    +    NA   + CA NM A
Sbjct: 3   THLLSPPTHFQTSMKLALHAPFLLAPSRRSPECSHVVSLKPHKRFQNAGSVVSCATNMTA 62

Query: 66  GQSGDPEKLNLDQLVNRVRKLWDNSPQPVKSFPWNRALENFIQLILDLFMAVVKYLSVPL 125
           GQS D  ++N D L NRV++LW++SP+PVKSFPWN AL+NFIQLI DL + V+KYL VPL
Sbjct: 63  GQSDDSGRVNWDSLKNRVKQLWESSPEPVKSFPWNEALDNFIQLIADLILTVIKYLFVPL 122

Query: 126 LAVSSLSEMSYCAHEKKLFLVPVPLLIGMAISDLLRETILDLSPLLKDAEVPWHLIAIGI 185
           L V+SLSEMSYCAHEKKL +VP   +IG + ++++R+T L LSP+LKD EVPWHLI I I
Sbjct: 123 LLVTSLSEMSYCAHEKKLLIVPFLFIIGFSAAEVMRQTALSLSPILKDLEVPWHLITIAI 182

Query: 186 FFTVIKLPGPYYPYWGRLFIPHFANGALWRTLWFAFLWYRKPKKAS 231
           FFT+IKLPGP YPYWGR+FIPH ANG L RT W  FLW+R+P+K S
Sbjct: 183 FFTLIKLPGPSYPYWGRIFIPHLANGGLVRTTWSMFLWFRRPQKTS 228

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297847266|ref|XP_002891514.1| EMB1273 [Arabidopsis lyrata subsp. lyrata] gi|297337356|gb|EFH67773.1| EMB1273 [Arabidopsis lyrata subsp. lyrata]

 Score =  263 bits (673), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 120/187 (64%), Positives = 152/187 (81%), Gaps = 1/187 (0%)

Query: 57  ICCAMNMAAGQSGD-PEKLNLDQLVNRVRKLWDNSPQPVKSFPWNRALENFIQLILDLFM 115
           +C A++M +G SG+ P+KLN D L+ + + +WDNSPQPVK FPWNRA ENFIQL+LDL +
Sbjct: 50  LCRAIHMESGHSGEQPKKLNFDNLLRKTKHVWDNSPQPVKEFPWNRAFENFIQLVLDLAI 109

Query: 116 AVVKYLSVPLLAVSSLSEMSYCAHEKKLFLVPVPLLIGMAISDLLRETILDLSPLLKDAE 175
           +VVK+L VP+LAVSS+SEMSYCAHE+KL LVP PL+IGM ++ +L+ET L +SP LK+AE
Sbjct: 110 SVVKFLFVPILAVSSISEMSYCAHERKLALVPFPLVIGMVVAGILQETALKISPRLKEAE 169

Query: 176 VPWHLIAIGIFFTVIKLPGPYYPYWGRLFIPHFANGALWRTLWFAFLWYRKPKKASEATP 235
           VPWHLIA+ +FFT+IKLPGPYYPYWGRLF+PHFANG L+R LW  F WY+K +  S  T 
Sbjct: 170 VPWHLIAMMMFFTLIKLPGPYYPYWGRLFVPHFANGVLFRALWSMFFWYKKTRNTSGNTL 229

Query: 236 SNDSVNT 242
            N S+ T
Sbjct: 230 QNHSLET 236

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356521213|ref|XP_003529251.1| PREDICTED: uncharacterized protein LOC100787804 [Glycine max]

 Score =  258 bits (660), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 118/173 (68%), Positives = 146/173 (84%)

Query: 56  NICCAMNMAAGQSGDPEKLNLDQLVNRVRKLWDNSPQPVKSFPWNRALENFIQLILDLFM 115
            I C+MNM+A QS D  K+ LDQL+++V+KLWD SP+PVK FP N+AL+NFIQLILDL +
Sbjct: 61  KIFCSMNMSAHQSDDHGKMKLDQLIDKVQKLWDISPEPVKKFPHNKALDNFIQLILDLIL 120

Query: 116 AVVKYLSVPLLAVSSLSEMSYCAHEKKLFLVPVPLLIGMAISDLLRETILDLSPLLKDAE 175
            VVKYL+VP+ AV+SLSEMSYCAHE+KL  VP+P+L G+A++ +L+ET L LSP L+DAE
Sbjct: 121 VVVKYLAVPVFAVTSLSEMSYCAHERKLVFVPLPVLFGVAVAGILKETALQLSPRLRDAE 180

Query: 176 VPWHLIAIGIFFTVIKLPGPYYPYWGRLFIPHFANGALWRTLWFAFLWYRKPK 228
           +PWHLIAI IFFT+IKLPGPYYPYW R+ IPHFANG L RTL FA LW+R+PK
Sbjct: 181 IPWHLIAIAIFFTLIKLPGPYYPYWVRIIIPHFANGVLLRTLLFAILWHRRPK 233

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|30694575|ref|NP_175374.2| protein embryo defective 1273 [Arabidopsis thaliana] gi|5430750|gb|AAD43150.1|AC007504_5 Unknown Protein [Arabidopsis thaliana] gi|29028826|gb|AAO64792.1| At1g49510 [Arabidopsis thaliana] gi|110742970|dbj|BAE99379.1| hypothetical protein [Arabidopsis thaliana] gi|332194316|gb|AEE32437.1| protein embryo defective 1273 [Arabidopsis thaliana]

 Score =  258 bits (658), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 131/237 (55%), Positives = 168/237 (70%), Gaps = 3/237 (1%)

Query: 8   SHLVSASTHLHRSSILPLHGLKQ-VLPYFRASKLRLGANRNGPLWNAKGNICCAMNMAAG 66
           SHL  +S+    S  L LH   Q  L Y + +K     + N    + +  +C A++M +G
Sbjct: 4   SHLFLSSSP-QSSLALRLHSTTQFTLSYSKNNKDCSFQSANEAKVSKRSLLCRAIHMESG 62

Query: 67  QSGD-PEKLNLDQLVNRVRKLWDNSPQPVKSFPWNRALENFIQLILDLFMAVVKYLSVPL 125
            SG+ P+KLN D L+ R + +WDNSPQPVK FPWNRA  NFIQL+LDL ++VVK+L VP+
Sbjct: 63  HSGEQPKKLNFDNLLRRTKHVWDNSPQPVKEFPWNRAFGNFIQLVLDLAISVVKFLFVPI 122

Query: 126 LAVSSLSEMSYCAHEKKLFLVPVPLLIGMAISDLLRETILDLSPLLKDAEVPWHLIAIGI 185
           LAVSS+SEMSYCAHE+KL LVP PL+IGM ++ +L+ET L +SP LK+AEVPWHLIA+ +
Sbjct: 123 LAVSSISEMSYCAHERKLALVPFPLVIGMVVAGVLQETALKISPRLKEAEVPWHLIAMMM 182

Query: 186 FFTVIKLPGPYYPYWGRLFIPHFANGALWRTLWFAFLWYRKPKKASEATPSNDSVNT 242
           FFT+IKLPGPYYPYWGRL +PHFANG L R LW  F WY+K +  S     N S+ T
Sbjct: 183 FFTLIKLPGPYYPYWGRLLVPHFANGVLLRALWSMFFWYKKTRNTSGNPLQNHSLET 239

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	250
TAIR|locus:2010292	240	emb1273 "AT1G49510" [Arabidops	0.936	0.975	0.514	1.2e-60

TAIR|locus:2010292 emb1273 "AT1G49510" [Arabidopsis thaliana (taxid:3702)]

 Score = 621 (223.7 bits), Expect = 1.2e-60, P = 1.2e-60
 Identities = 122/237 (51%), Positives = 157/237 (66%)

Query:     8 SHLVSASTHLHRSSILPLHGLKQ-VLPYFRASKLRLGANRNGPLWNAKGNICCAMNMAAG 66
             SHL  +S+    S  L LH   Q  L Y + +K     + N    + +  +C A++M +G
Sbjct:     4 SHLFLSSSP-QSSLALRLHSTTQFTLSYSKNNKDCSFQSANEAKVSKRSLLCRAIHMESG 62

Query:    67 QSGD-PEKLNLDQLVNRVRKLWDNSPQPVKSFPWNRALENFIQLILDLFMAVVKYXXXXX 125
              SG+ P+KLN D L+ R + +WDNSPQPVK FPWNRA  NFIQL+LDL ++VVK+     
Sbjct:    63 HSGEQPKKLNFDNLLRRTKHVWDNSPQPVKEFPWNRAFGNFIQLVLDLAISVVKFLFVPI 122

Query:   126 XXXXXXXEMSYCAHEKKLFLVPVPLLIGMAISDLLRETILDLSPLLKDAEVPWHLIAIGI 185
                    EMSYCAHE+KL LVP PL+IGM ++ +L+ET L +SP LK+AEVPWHLIA+ +
Sbjct:   123 LAVSSISEMSYCAHERKLALVPFPLVIGMVVAGVLQETALKISPRLKEAEVPWHLIAMMM 182

Query:   186 FFTVIKLPGPYYPYWGRLFIPHFANGALWRTLWFAFLWYRKPKKASEATPSNDSVNT 242
             FFT+IKLPGPYYPYWGRL +PHFANG L R LW  F WY+K +  S     N S+ T
Sbjct:   183 FFTLIKLPGPYYPYWGRLLVPHFANGVLLRALWSMFFWYKKTRNTSGNPLQNHSLET 239


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.323   0.139   0.449    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      250       238   0.00091  113 3  11 22  0.39    33
                                                     32  0.44    36


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  606 (64 KB)
  Total size of DFA:  204 KB (2113 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  18.85u 0.18s 19.03t   Elapsed:  00:00:01
  Total cpu time:  18.85u 0.18s 19.03t   Elapsed:  00:00:01
  Start:  Fri May 10 15:44:41 2013   End:  Fri May 10 15:44:42 2013

GO:0003674 "molecular_function" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0009793 "embryo development ending in seed dormancy" evidence=NAS

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00036527001 SubName- Full=Chromosome chr3 scaffold_8, whole genome shotgun sequence; (253 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

No hit with probability above 80.00

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	250
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-04

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 41.4 bits (96), Expect = 2e-04
 Identities = 37/253 (14%), Positives = 70/253 (27%), Gaps = 91/253 (35%)

Query: 17  LHRSSILPLHGL----KQVLPYFRASKLRLGANRNGPL-WNAKGNICCA---MNM----- 63
           L  +  + + G+    K  +        ++    +  + W    N       + M     
Sbjct: 147 LRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLL 206

Query: 64  --------AAGQSGDPEKLNLDQLVNRVRKLWDNSPQP--------VKSFPWN-RALENF 106
                   +        KL +  +   +R+L  + P          V     N +A   F
Sbjct: 207 YQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNV----QNAKAWNAF 262

Query: 107 -IQ---LILDLFMAVVKYLSVPLLAVSSLSEMSYCAHE---KKLFL---------VPV-- 148
            +    L+   F  V  +LS       SL   S        K L L         +P   
Sbjct: 263 NLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREV 322

Query: 149 ----PLLIGMAISDLLRE-----------------TILD-----LSP------------L 170
               P  + + I++ +R+                 TI++     L P             
Sbjct: 323 LTTNPRRLSI-IAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVF 381

Query: 171 LKDAEVPWHLIAI 183
              A +P  L+++
Sbjct: 382 PPSAHIPTILLSL 394

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00