Citrus Sinensis ID: 025615

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250
Protein Sequence
MGEPKSRDSAASKDDSPTSSAPSTPAAPPLPRQPLSLVQPSQKKKNRPKMFRVFRSVFRSFPIVSPAMCKMPVYPGGLPDIRTPSSSSRKVTGTLFGYRKGKVSLSIQENPKCLPTVIVELAMQTNVLQKEMGSGMVRIALECEKRPEKDKVKLLEEPLWSMFCNGKKTGYGVKREANDEDFHVMELLRPVSMGGGVLPGNSDAEGADGELAYIRAHFERVVGSKDSETLYMLSPEGNNGPELSIFFVRI
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHcccccccccccccccccccccccccccccEEEEEEEEEcccEEEEEEEcccccccEEEEEccccHHHHHHHHccccEEEEEEEcccccccccccccccEEEEEEccEEEEEEccccccHHHHHHHHHHccEEccccccccccccccccccEEEEEEcccEEEccccccEEEcccccccccccEEEEEEEc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHccccccccccccccccccccccccccccccEEEEEEEcccccEEEEEEEcccccccEEEEEcccHHHHHHHHHHcccEEEEEEEcccccccccccccccEEEEEEcccEEEEEEEccccHHHHHHHHHHccEEccccccccccccccccccEEEEEEEEEEEEccccccEEEEEccccccccEEEEEEEEc
Coil and Loop (DISEMBL)
mgepksrdsaaskddsptssapstpaapplprqplslvqpsqkkknrpkmFRVFRSVFrsfpivspamckmpvypgglpdirtpssssrkvtgtlfgyrkgkvslsiqenpkclPTVIVELAMQTNVLQKEMGSGMVRIALEcekrpekdkvklleeplwsmfcngkktgygvkreandedfHVMELLrpvsmgggvlpgnsdaegadGELAYIRAHFErvvgskdsetlymlspegnngpelsIFFVRI
Flexible Loop (DISEMBL)
mgepksrdsaaskddsptssapstpaapplprqplslvqpsqkkknrpkMFRVFRSVFRSFPIVSPAMCKMPVYPGGlpdirtpssssrkvTGTLFGYrkgkvslsiqenpkCLPTVIVELAMQTNVLQKEMGSGMVRIALecekrpekdkvklleeplwsmfcngkktgygvKREANDEDFHVMELLRPVSMGGGVLPGNSDAEGADGELAYIRAHFERVVGSKDSETLYmlspegnngpelsiFFVRI
Low Complexity Region (SEG)
MGEPksrdsaaskddsptssapstpaapplprqplslVQPSQKKKNRPKMfrvfrsvfrsfpivsPAMCKMPVYPGGLPDIRTPSSSSRKVTGTLFGYRKGKVSLSIQENPKCLPTVIVELAMQTNVLQKEMGSGMVRIALECEKRPEKDKVKLLEEPLWSMFCNGKKTGYGVKREANDEDFHVMELLRPVSMGGGVLPGNSDAEGADGELAYIRAHFERVVGSKDSETLYMLSPEGNNGPELSIFFVRI
Disordered region (IsUnstruct)
*************************************************MFRVFRSVFRSFPIVSPAMCKMPVYPGGL************VTGTLFGYRKGKVSLSIQENPKCLPTVIVELAMQTNVLQKEMGSGMVRIALECEKR***DKVKLLEEPLWSMFCNGKKTGYGVKREANDEDFHVMELLRPVSMGGGVL**********GELAYIRAHFERVVGS*****LY*************IFF***
Disordered Region (DISOPRED)
********************************************************VFRSFPIVSPAMCKMP*******************TGTLFGYRKGKVSLSIQENPKCLPTVIVELAMQTNVLQKEMGSGMVRIA******************LWSMFCNGKKTGYGVKREANDEDFHVMELLRPVSMGGGVLPGNSD**GADGELAYIRAHFERVVGSKDSETLYMLSPEGNNGPELSIFFVRI
Disordered Region (DISEMBL)
******************************PRQPLSLV********RPKMFRVFRSVFRSFPIVSPAMCKMPVYPGGLPDIRTPSSSSRKVTGTLFGYRKGKVSLSIQENPKCLPTVIVELAMQTNVLQKEMGSGMVRIALECEKRPEKDKVKLLEEPLWSMFCNGKKTGYGVKREANDEDFHVMELLRPVSMGGGVLPGNSDAEGADGELAYIRAHFERVVGSKDSETLYMLSPEGNNGPELSIFFVRI
Disordered Region (DISPRO)
************************************************KMFRVFRSVFRSFPIVSPAMCKMPVYPGG**D******SSRKVTGTLFGYRKGKVSLSIQENPKCLPTVIVELAMQTNVLQKEMGSGMVRIALECEKRPEKDKVKLLEEPLWSMFCNGKKTGYGVKREANDEDFHVMELLRPVSMGGGVLPGNSDAEGADGELAYIRAHFERVVGSKDSETLYMLSPEGNNGPELSIFFVRI
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MGEPKSRDSAASKDDSPTSSAPSTPAAPPLPRQPLSLVQPSQKKKNRPKMFRVFRSVFRSFPIVSPAMCKMPVYPGGLPDIRTPSSSSRKVTGTLFGYRKGKVSLSIQENPKCLPTVIVELAMQTNVLQKEMGSGMVRIALECEKRPEKDKVKLLEEPLWSMFCNGKKTGYGVKREANDEDFHVMELLRPVSMGGGVLPGNSDAEGADGELAYIRAHFERVVGSKDSETLYMLSPEGNNGPELSIFFVRI
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	250
255575555	255	conserved hypothetical protein [Ricinus	0.996	0.976	0.722	2e-94
225438571	247	PREDICTED: uncharacterized protein LOC10	0.864	0.874	0.768	5e-94
297825059	254	hypothetical protein ARALYDRAFT_481063 [	1.0	0.984	0.681	4e-91
15227126	252	uncharacterized protein [Arabidopsis tha	1.0	0.992	0.674	1e-89
449514758	264	PREDICTED: LOW QUALITY PROTEIN: uncharac	0.824	0.780	0.767	6e-89
449461479	264	PREDICTED: uncharacterized protein LOC10	0.824	0.780	0.767	6e-89
224081246	229	predicted protein [Populus trichocarpa]	0.872	0.951	0.716	2e-84
357464399	259	Plant-specific domain TIGR01570 family p	0.868	0.837	0.659	7e-84
15235158	264	uncharacterized protein [Arabidopsis tha	0.844	0.799	0.679	8e-83
224147705	201	predicted protein [Populus trichocarpa]	0.804	1.0	0.717	1e-82

>gi|255575555|ref|XP_002528678.1| conserved hypothetical protein [Ricinus communis] gi|223531901|gb|EEF33717.1| conserved hypothetical protein [Ricinus communis]

 Score =  350 bits (899), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 185/256 (72%), Positives = 212/256 (82%), Gaps = 7/256 (2%)

Query: 1   MGEP-KSRDSAASKDDSP---TSSAPSTPAAPPLPRQPLSLVQPS-QKKKNRPKMFRVFR 55
           MGEP +   +AAS +DSP    S AP+ P      +Q  +L+QPS +KKKN+ K+FRVFR
Sbjct: 1   MGEPMQPPSTAASSNDSPRTPKSPAPTPPHPQQPLQQTSNLLQPSSEKKKNKTKVFRVFR 60

Query: 56  SVFRSFPIVSPAMCKMPVYPGGL-PDIRTPSSSSRKVTGTLFGYRKGKVSLSIQENPKCL 114
           SVFRS PI++PA CK+PV  GGL PD      S  KVTGTLFGYRKG+VSLSIQENP+C 
Sbjct: 61  SVFRSLPIITPA-CKIPVLQGGLLPDPHHRHVSGNKVTGTLFGYRKGRVSLSIQENPRCF 119

Query: 115 PTVIVELAMQTNVLQKEMGSGMVRIALECEKRPEKDKVKLLEEPLWSMFCNGKKTGYGVK 174
           P+VIVELA+QTNVLQKE+GSGMVRIALECEKRPEKDK++LL+EPLW+MFCNGKK GYGVK
Sbjct: 120 PSVIVELAIQTNVLQKELGSGMVRIALECEKRPEKDKIRLLDEPLWTMFCNGKKNGYGVK 179

Query: 175 REANDEDFHVMELLRPVSMGGGVLPGNSDAEGADGELAYIRAHFERVVGSKDSETLYMLS 234
           R+A +ED  VMELLR VSMG GVLPG+SDAEG D E AYIRAHFERVVGSKDSETLYM+S
Sbjct: 180 RDALEEDLKVMELLRAVSMGAGVLPGSSDAEGPDSEFAYIRAHFERVVGSKDSETLYMIS 239

Query: 235 PEGNNGPELSIFFVRI 250
           PEGNNGPELSIFFVR+
Sbjct: 240 PEGNNGPELSIFFVRV 255

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225438571|ref|XP_002276210.1| PREDICTED: uncharacterized protein LOC100266423 [Vitis vinifera]

 Score =  350 bits (897), Expect = 5e-94,   Method: Compositional matrix adjust.
 Identities = 169/220 (76%), Positives = 195/220 (88%), Gaps = 4/220 (1%)

Query: 32  RQPLSLVQPSQKKKNRP-KMFRVFRSVFRSFPIVSPAMCKMPVYPGGLPDIRTPSSSSRK 90
           RQ LSLVQPS KKK++P K+FRVFRSVFRSFPI++PA CK P +P G PD      S  +
Sbjct: 31  RQQLSLVQPSTKKKHKPIKVFRVFRSVFRSFPIITPA-CKFPYFPTGFPD--GNKVSGIR 87

Query: 91  VTGTLFGYRKGKVSLSIQENPKCLPTVIVELAMQTNVLQKEMGSGMVRIALECEKRPEKD 150
           +TGTLFGYRKGKV+LS+QENPKCLP ++VELAM TNVLQKEMG+GMVRIALECEK+PEKD
Sbjct: 88  ITGTLFGYRKGKVTLSLQENPKCLPMLVVELAMLTNVLQKEMGTGMVRIALECEKKPEKD 147

Query: 151 KVKLLEEPLWSMFCNGKKTGYGVKREANDEDFHVMELLRPVSMGGGVLPGNSDAEGADGE 210
           K KL+EEPLW+M+ NGKK+GYGVKREA++ED ++ME+L+ VSMG GVLPGN++AEG D E
Sbjct: 148 KTKLMEEPLWTMYYNGKKSGYGVKREASEEDLYIMEVLKAVSMGAGVLPGNAEAEGQDDE 207

Query: 211 LAYIRAHFERVVGSKDSETLYMLSPEGNNGPELSIFFVRI 250
           LAYIRAHFERVVGSKDSETLYMLSPEGNNGPELSIFFVRI
Sbjct: 208 LAYIRAHFERVVGSKDSETLYMLSPEGNNGPELSIFFVRI 247

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297825059|ref|XP_002880412.1| hypothetical protein ARALYDRAFT_481063 [Arabidopsis lyrata subsp. lyrata] gi|297326251|gb|EFH56671.1| hypothetical protein ARALYDRAFT_481063 [Arabidopsis lyrata subsp. lyrata]

 Score =  340 bits (871), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 173/254 (68%), Positives = 206/254 (81%), Gaps = 4/254 (1%)

Query: 1   MGEPKSRDSAASK--DDSPTSSAPSTPAAPPLPRQPLSLVQPS-QKKKNRPKMFRVFRSV 57
           MGE + R S AS   D     S   +P+  P PR  ++L++PS Q KK   K+FRVFRSV
Sbjct: 1   MGEQRPRASGASSSTDSYSIPSGSPSPSPSPAPRHHVTLLEPSHQNKKKSKKVFRVFRSV 60

Query: 58  FRSFPIVSPAMCKMPVYPGG-LPDIRTPSSSSRKVTGTLFGYRKGKVSLSIQENPKCLPT 116
           FRSFPI++PA CK+PV PGG LPD     SS  +VTGTLFGYRKG+VSLSIQE+P+CLP+
Sbjct: 61  FRSFPIITPAACKIPVLPGGSLPDPHRSGSSGSRVTGTLFGYRKGRVSLSIQESPRCLPS 120

Query: 117 VIVELAMQTNVLQKEMGSGMVRIALECEKRPEKDKVKLLEEPLWSMFCNGKKTGYGVKRE 176
           ++VELAMQT VLQKE+  GMVRIALE EKR +K+K K+++EPLW+MFCNGKKTGYGVKR+
Sbjct: 121 LVVELAMQTMVLQKELSGGMVRIALETEKRGDKEKTKIMDEPLWTMFCNGKKTGYGVKRD 180

Query: 177 ANDEDFHVMELLRPVSMGGGVLPGNSDAEGADGELAYIRAHFERVVGSKDSETLYMLSPE 236
           A +ED +VMELLRPVSMG GVLPGNS+ EG D E+AY+RA+FERVVGSKDSET YMLSPE
Sbjct: 181 ATEEDLNVMELLRPVSMGAGVLPGNSEVEGPDSEMAYMRAYFERVVGSKDSETFYMLSPE 240

Query: 237 GNNGPELSIFFVRI 250
           GNNGPELSIFFVR+
Sbjct: 241 GNNGPELSIFFVRV 254

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15227126|ref|NP_179790.1| uncharacterized protein [Arabidopsis thaliana] gi|4417291|gb|AAD20416.1| hypothetical protein [Arabidopsis thaliana] gi|28204790|gb|AAO37137.1| hypothetical protein [Arabidopsis thaliana] gi|50058881|gb|AAT69185.1| hypothetical protein At2g21990 [Arabidopsis thaliana] gi|330252155|gb|AEC07249.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  335 bits (859), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 170/252 (67%), Positives = 210/252 (83%), Gaps = 2/252 (0%)

Query: 1   MGEPKSRDSAASKDDSPTSSAPSTPAAPPLPRQPLSLVQPS-QKKKNRPKMFRVFRSVFR 59
           MGE ++  +++S D   T S  ++P+  P PRQ ++L++PS Q KK   K+FRVFRSVFR
Sbjct: 1   MGEQRASGASSSTDSYSTPSPSASPSPSPAPRQHVTLLEPSHQHKKKSKKVFRVFRSVFR 60

Query: 60  SFPIVSPAMCKMPVYPGG-LPDIRTPSSSSRKVTGTLFGYRKGKVSLSIQENPKCLPTVI 118
           SFPI++PA CK+PV PGG LPD     SS  +VTGTLFGYRKG+VSLSIQE+P+CLP+++
Sbjct: 61  SFPIITPAACKIPVLPGGSLPDQHRSGSSGSRVTGTLFGYRKGRVSLSIQESPRCLPSLV 120

Query: 119 VELAMQTNVLQKEMGSGMVRIALECEKRPEKDKVKLLEEPLWSMFCNGKKTGYGVKREAN 178
           VELAMQT VLQKE+  GMVRIALE EKR +K+K+K+++EPLW+MF NGKKTGYGVKR+A 
Sbjct: 121 VELAMQTMVLQKELSGGMVRIALETEKRGDKEKIKIMDEPLWTMFSNGKKTGYGVKRDAT 180

Query: 179 DEDFHVMELLRPVSMGGGVLPGNSDAEGADGELAYIRAHFERVVGSKDSETLYMLSPEGN 238
           +ED +VMELLRPVSMG GVLPGN++ EG D E+AY+RA+FERVVGSKDSET YMLSPEGN
Sbjct: 181 EEDLNVMELLRPVSMGAGVLPGNTEFEGPDSEMAYMRAYFERVVGSKDSETFYMLSPEGN 240

Query: 239 NGPELSIFFVRI 250
           NGPELSIFFVR+
Sbjct: 241 NGPELSIFFVRV 252

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449514758|ref|XP_004164472.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized LOC101216750 [Cucumis sativus]

 Score =  332 bits (852), Expect = 6e-89,   Method: Compositional matrix adjust.
 Identities = 162/211 (76%), Positives = 186/211 (88%), Gaps = 5/211 (2%)

Query: 42  QKKKNRPKMFRVFRSVFRSFPIVSPAMCKMPVYPGGLPD-IRTPSSSSRKVTGTLFGYRK 100
           ++KK++ K+FRVFRSVFRSFPI++PA CK+P  P GL D +R PS S  +VTGTLFGYRK
Sbjct: 57  KRKKHKTKVFRVFRSVFRSFPIITPA-CKIPSLPSGLSDTLRGPSGS--RVTGTLFGYRK 113

Query: 101 GKVSLSIQENPKCLPTVIVELAMQTNVLQKEMGSGMVRIALECEKRPEK-DKVKLLEEPL 159
           G+VSLS+QE P+  P++++ELAMQTNVLQKEM SGMVRIALECEKR +K DK KL++EPL
Sbjct: 114 GRVSLSMQETPRSFPSIVIELAMQTNVLQKEMSSGMVRIALECEKRADKSDKTKLMDEPL 173

Query: 160 WSMFCNGKKTGYGVKREANDEDFHVMELLRPVSMGGGVLPGNSDAEGADGELAYIRAHFE 219
           W+MFCNGKKTGYGVKREA+DED  VMELLRPVSMG GVLPGNSD EG DGELAY+RAHFE
Sbjct: 174 WTMFCNGKKTGYGVKREASDEDLKVMELLRPVSMGAGVLPGNSDMEGPDGELAYMRAHFE 233

Query: 220 RVVGSKDSETLYMLSPEGNNGPELSIFFVRI 250
           RVVGS+DSET YMLSPE NNGPELSIFFVRI
Sbjct: 234 RVVGSRDSETFYMLSPEENNGPELSIFFVRI 264

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449461479|ref|XP_004148469.1| PREDICTED: uncharacterized protein LOC101216750 [Cucumis sativus]

 Score =  332 bits (852), Expect = 6e-89,   Method: Compositional matrix adjust.
 Identities = 162/211 (76%), Positives = 186/211 (88%), Gaps = 5/211 (2%)

Query: 42  QKKKNRPKMFRVFRSVFRSFPIVSPAMCKMPVYPGGLPD-IRTPSSSSRKVTGTLFGYRK 100
           ++KK++ K+FRVFRSVFRSFPI++PA CK+P  P GL D +R PS S  +VTGTLFGYRK
Sbjct: 57  KRKKHKTKVFRVFRSVFRSFPIITPA-CKIPSLPSGLSDTLRGPSGS--RVTGTLFGYRK 113

Query: 101 GKVSLSIQENPKCLPTVIVELAMQTNVLQKEMGSGMVRIALECEKRPEK-DKVKLLEEPL 159
           G+VSLS+QE P+  P++++ELAMQTNVLQKEM SGMVRIALECEKR +K DK KL++EPL
Sbjct: 114 GRVSLSMQETPRSFPSIVIELAMQTNVLQKEMSSGMVRIALECEKRADKSDKTKLMDEPL 173

Query: 160 WSMFCNGKKTGYGVKREANDEDFHVMELLRPVSMGGGVLPGNSDAEGADGELAYIRAHFE 219
           W+MFCNGKKTGYGVKREA+DED  VMELLRPVSMG GVLPGNSD EG DGELAY+RAHFE
Sbjct: 174 WTMFCNGKKTGYGVKREASDEDLKVMELLRPVSMGAGVLPGNSDMEGPDGELAYMRAHFE 233

Query: 220 RVVGSKDSETLYMLSPEGNNGPELSIFFVRI 250
           RVVGS+DSET YMLSPE NNGPELSIFFVRI
Sbjct: 234 RVVGSRDSETFYMLSPEENNGPELSIFFVRI 264

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224081246|ref|XP_002306350.1| predicted protein [Populus trichocarpa] gi|222855799|gb|EEE93346.1| predicted protein [Populus trichocarpa]

 Score =  317 bits (813), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 157/219 (71%), Positives = 192/219 (87%), Gaps = 1/219 (0%)

Query: 32  RQPLSLVQPSQKKKNRPKMFRVFRSVFRSFPIVSPAMCKMPVYPGGLPDIRTPSSSSRKV 91
            Q LSLVQP QKKK++PK+FR+ RSVFR+FPI++   CK+PV  GGL +     S S KV
Sbjct: 12  HQQLSLVQPPQKKKHKPKVFRILRSVFRTFPIITSPACKIPVLSGGLLESARGISGS-KV 70

Query: 92  TGTLFGYRKGKVSLSIQENPKCLPTVIVELAMQTNVLQKEMGSGMVRIALECEKRPEKDK 151
           TGTLFGYRKG+VSLS+QENP+CLP+++VEL+MQT+VLQKEM +GM+RIALECEKR +KDK
Sbjct: 71  TGTLFGYRKGRVSLSVQENPRCLPSLVVELSMQTSVLQKEMSTGMLRIALECEKRSDKDK 130

Query: 152 VKLLEEPLWSMFCNGKKTGYGVKREANDEDFHVMELLRPVSMGGGVLPGNSDAEGADGEL 211
           +++L+EPLW+MFCNG+K GYGVKR+A++ED +VMELL+ VSMG GVLPGNS  EG DGEL
Sbjct: 131 IRVLDEPLWTMFCNGRKGGYGVKRDASEEDLNVMELLKAVSMGAGVLPGNSVVEGPDGEL 190

Query: 212 AYIRAHFERVVGSKDSETLYMLSPEGNNGPELSIFFVRI 250
           AY+RAHFERVVGSKDSETLYM+SPEG+ GPELSIFFVR+
Sbjct: 191 AYMRAHFERVVGSKDSETLYMISPEGDTGPELSIFFVRV 229

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357464399|ref|XP_003602481.1| Plant-specific domain TIGR01570 family protein [Medicago truncatula] gi|355491529|gb|AES72732.1| Plant-specific domain TIGR01570 family protein [Medicago truncatula]

 Score =  316 bits (809), Expect = 7e-84,   Method: Compositional matrix adjust.
 Identities = 147/223 (65%), Positives = 186/223 (83%), Gaps = 6/223 (2%)

Query: 33  QPLSLVQPSQKKKNRPKMFRVFRSVFRSFPIVSPAMCKMPVYPGGLPD----IRTPSSSS 88
           Q +SLVQPS K++++ K+ RVFRSVFRS PI++P +CK P +P G PD    I    S+ 
Sbjct: 38  QNISLVQPSHKRRHKTKVVRVFRSVFRSLPIITP-VCKFPSFPNGTPDSQYHINIGGSTG 96

Query: 89  RKVTGTLFGYRKGKVSLSIQENPKCLPTVIVELAMQTNVLQKEMGSGMVRIALECEKRPE 148
            K++GTLFG+RKG+VS SIQENP+CLP++++EL+MQT +LQKEM +GMVR+ALECEKR +
Sbjct: 97  TKISGTLFGHRKGRVSFSIQENPRCLPSLVIELSMQTCMLQKEMAAGMVRVALECEKRQD 156

Query: 149 KDKVKLLEEPLWSMFCNGKKTGYGVKREANDEDFHVMELLRPVSMGGGVLPGNSDAEGAD 208
           KDK  L+EEP+W+M+CNGKKTGYGVKREA  ED HVME+L+ V+MG GV+P N++A+  D
Sbjct: 157 KDKTLLIEEPVWTMYCNGKKTGYGVKREATVEDLHVMEILKAVTMGAGVVPMNNEADNVD 216

Query: 209 GELAYIRAHFERVVGSKDSETLYMLSPEG-NNGPELSIFFVRI 250
           GELAY+RA FE VVGSKDSETLYMLSP+G NNGPEL+IFFVRI
Sbjct: 217 GELAYMRASFEHVVGSKDSETLYMLSPDGNNNGPELTIFFVRI 259

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15235158|ref|NP_195671.1| uncharacterized protein [Arabidopsis thaliana] gi|5042177|emb|CAB44696.1| putative protein [Arabidopsis thaliana] gi|7270945|emb|CAB80624.1| putative protein [Arabidopsis thaliana] gi|26451871|dbj|BAC43028.1| unknown protein [Arabidopsis thaliana] gi|28950821|gb|AAO63334.1| At4g39610 [Arabidopsis thaliana] gi|332661693|gb|AEE87093.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  312 bits (799), Expect = 8e-83,   Method: Compositional matrix adjust.
 Identities = 155/228 (67%), Positives = 186/228 (81%), Gaps = 17/228 (7%)

Query: 37  LVQP--SQKKKNRPKMFRVFRSVFRSFPIVSP--AMCKMPV-YPG-GLPDIRTPSSSSRK 90
           L+QP  S+KKKNR  +FRV R+VFRSFPI +     CK+PV +PG GLPD   P  ++ +
Sbjct: 40  LLQPPSSKKKKNRTNVFRVLRTVFRSFPIFTTPSVACKIPVIHPGLGLPD---PHHNTSR 96

Query: 91  VTGTLFGYRKGKVSLSIQENPKCLPTVIVELAMQTNVLQKEMGSGMVRIALECEKRPEKD 150
           +TGTLFGYRKG+VSLSIQENPKCLP+++VELAMQT  LQKE+ +GMVRIALE EK+P  D
Sbjct: 97  ITGTLFGYRKGRVSLSIQENPKCLPSLVVELAMQTTTLQKELSTGMVRIALETEKQPRAD 156

Query: 151 --------KVKLLEEPLWSMFCNGKKTGYGVKREANDEDFHVMELLRPVSMGGGVLPGNS 202
                   K  +LEEPLW+M+C G+KTGYGVKREA +ED +VMELLRPVSMG GVLPGNS
Sbjct: 157 NNNSKTEKKTDILEEPLWTMYCKGEKTGYGVKREATEEDLNVMELLRPVSMGAGVLPGNS 216

Query: 203 DAEGADGELAYIRAHFERVVGSKDSETLYMLSPEGNNGPELSIFFVRI 250
           ++EG DGE+AY+RA+FERV+GSKDSET YMLSPEGNNGPELS FFVR+
Sbjct: 217 ESEGPDGEMAYMRAYFERVIGSKDSETFYMLSPEGNNGPELSFFFVRV 264

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224147705|ref|XP_002336527.1| predicted protein [Populus trichocarpa] gi|222835865|gb|EEE74286.1| predicted protein [Populus trichocarpa]

 Score =  311 bits (798), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 145/202 (71%), Positives = 177/202 (87%), Gaps = 1/202 (0%)

Query: 49  KMFRVFRSVFRSFPIVSPAMCKMPVYPGGLPDIRTPSSSSRKVTGTLFGYRKGKVSLSIQ 108
           K+FR+ RSVFR+FPI++   CK PV  GGL +     S S KVTGTLFGYRKG+VSLS+Q
Sbjct: 1   KVFRILRSVFRTFPIITSPACKNPVLSGGLLESARGISGS-KVTGTLFGYRKGRVSLSVQ 59

Query: 109 ENPKCLPTVIVELAMQTNVLQKEMGSGMVRIALECEKRPEKDKVKLLEEPLWSMFCNGKK 168
           ENP+CLP+++VEL+MQT+VLQKEM +GM+RIALECEKR +KDK+++L+EPLW+MFCNG+K
Sbjct: 60  ENPRCLPSLVVELSMQTSVLQKEMSTGMLRIALECEKRSDKDKIRVLDEPLWTMFCNGRK 119

Query: 169 TGYGVKREANDEDFHVMELLRPVSMGGGVLPGNSDAEGADGELAYIRAHFERVVGSKDSE 228
            GYGVKR+A++ED +VMELL+ VSMG GVLPGNS  EG DGELAY+RAHFERVVGSKDSE
Sbjct: 120 GGYGVKRDASEEDLNVMELLKAVSMGAGVLPGNSVVEGPDGELAYMRAHFERVVGSKDSE 179

Query: 229 TLYMLSPEGNNGPELSIFFVRI 250
           TLYM+SPEG+ GPELSIFFVR+
Sbjct: 180 TLYMISPEGDTGPELSIFFVRV 201

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	250
TAIR|locus:2052541	252	AT2G21990 "AT2G21990" [Arabido	0.852	0.845	0.669	4e-74
TAIR|locus:2122546	264	AT4G39610 "AT4G39610" [Arabido	0.84	0.795	0.634	2.1e-70
TAIR|locus:2169454	261	AT5G06990 "AT5G06990" [Arabido	0.724	0.693	0.549	1e-52
TAIR|locus:2165477	238	AT5G42680 "AT5G42680" [Arabido	0.664	0.697	0.526	1.5e-42
TAIR|locus:2062647	297	MIZ1 "AT2G41660" [Arabidopsis	0.66	0.555	0.494	6.8e-40
TAIR|locus:2178312	277	AT5G23100 "AT5G23100" [Arabido	0.392	0.353	0.475	8.3e-39
TAIR|locus:2102360	267	AT3G25640 "AT3G25640" [Arabido	0.644	0.602	0.467	1.1e-37
TAIR|locus:2065609	247	AT2G37880 "AT2G37880" [Arabido	0.676	0.684	0.428	2.2e-34
TAIR|locus:2199577	245	AT1G21050 "AT1G21050" [Arabido	0.66	0.673	0.425	1.8e-32
TAIR|locus:2041238	245	AT2G22460 "AT2G22460" [Arabido	0.66	0.673	0.449	9.8e-32

TAIR|locus:2052541 AT2G21990 "AT2G21990" [Arabidopsis thaliana (taxid:3702)]

 Score = 748 (268.4 bits), Expect = 4.0e-74, P = 4.0e-74
 Identities = 144/215 (66%), Positives = 172/215 (80%)

Query:    38 VQPS-QKKKNRPKMXXXXXXXXXXXXXXXPAMCKMPVYPGG-LPDIRTPSSSSRKVTGTL 95
             ++PS Q KK   K+               PA CK+PV PGG LPD     SS  +VTGTL
Sbjct:    38 LEPSHQHKKKSKKVFRVFRSVFRSFPIITPAACKIPVLPGGSLPDQHRSGSSGSRVTGTL 97

Query:    96 FGYRKGKVSLSIQENPKCLPTVIVELAMQTNVLQKEMGSGMVRIALECEKRPEKDKVKLL 155
             FGYRKG+VSLSIQE+P+CLP+++VELAMQT VLQKE+  GMVRIALE EKR +K+K+K++
Sbjct:    98 FGYRKGRVSLSIQESPRCLPSLVVELAMQTMVLQKELSGGMVRIALETEKRGDKEKIKIM 157

Query:   156 EEPLWSMFCNGKKTGYGVKREANDEDFHVMELLRPVSMGGGVLPGNSDAEGADGELAYIR 215
             +EPLW+MF NGKKTGYGVKR+A +ED +VMELLRPVSMG GVLPGN++ EG D E+AY+R
Sbjct:   158 DEPLWTMFSNGKKTGYGVKRDATEEDLNVMELLRPVSMGAGVLPGNTEFEGPDSEMAYMR 217

Query:   216 AHFERVVGSKDSETLYMLSPEGNNGPELSIFFVRI 250
             A+FERVVGSKDSET YMLSPEGNNGPELSIFFVR+
Sbjct:   218 AYFERVVGSKDSETFYMLSPEGNNGPELSIFFVRV 252

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2122546 AT4G39610 "AT4G39610" [Arabidopsis thaliana (taxid:3702)]

 Score = 713 (256.0 bits), Expect = 2.1e-70, P = 2.1e-70
 Identities = 144/227 (63%), Positives = 175/227 (77%)

Query:    38 VQP--SQKKKNRPKMXXXXXXXXXXX-XXXXPAM-CKMPV-YPG-GLPDIRTPSSSSRKV 91
             +QP  S+KKKNR  +                P++ CK+PV +PG GLPD   P  ++ ++
Sbjct:    41 LQPPSSKKKKNRTNVFRVLRTVFRSFPIFTTPSVACKIPVIHPGLGLPD---PHHNTSRI 97

Query:    92 TGTLFGYRKGKVSLSIQENPKCLPTVIVELAMQTNVLQKEMGSGMVRIALECEKRPEKD- 150
             TGTLFGYRKG+VSLSIQENPKCLP+++VELAMQT  LQKE+ +GMVRIALE EK+P  D 
Sbjct:    98 TGTLFGYRKGRVSLSIQENPKCLPSLVVELAMQTTTLQKELSTGMVRIALETEKQPRADN 157

Query:   151 -------KVKLLEEPLWSMFCNGKKTGYGVKREANDEDFHVMELLRPVSMGGGVLPGNSD 203
                    K  +LEEPLW+M+C G+KTGYGVKREA +ED +VMELLRPVSMG GVLPGNS+
Sbjct:   158 NNSKTEKKTDILEEPLWTMYCKGEKTGYGVKREATEEDLNVMELLRPVSMGAGVLPGNSE 217

Query:   204 AEGADGELAYIRAHFERVVGSKDSETLYMLSPEGNNGPELSIFFVRI 250
             +EG DGE+AY+RA+FERV+GSKDSET YMLSPEGNNGPELS FFVR+
Sbjct:   218 SEGPDGEMAYMRAYFERVIGSKDSETFYMLSPEGNNGPELSFFFVRV 264

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2169454 AT5G06990 "AT5G06990" [Arabidopsis thaliana (taxid:3702)]

 Score = 546 (197.3 bits), Expect = 1.0e-52, P = 1.0e-52
 Identities = 106/193 (54%), Positives = 145/193 (75%)

Query:    68 MCKMPVYPGGLPDIRTPSSSSRKVTGTLFGYRKGKVSLSIQENPKCLPTVIVELAMQTNV 127
             MCK PV  GG          +R VTGTLFGYRK +V+L++QENP+ LP +++ELA+ T  
Sbjct:    71 MCKFPVGGGGRLHENHVHGGTR-VTGTLFGYRKTRVNLAVQENPRSLPILLLELAIPTGK 129

Query:   128 LQKEMGSGMVRIALECEKRPEKDKVKLLEEPLWSMFCNGKKTGYGVKREANDEDFHVMEL 187
             L +++G G+VRIALECEK+P  +K K+++EP+W+++CNGKK+GYGVKR+  +ED  VM++
Sbjct:   130 LLQDLGVGLVRIALECEKKPS-EKTKIIDEPIWALYCNGKKSGYGVKRQPTEEDLVVMQM 188

Query:   188 LRPVSMGGGVLPGNSDA----EGA------DGELAYIRAHFERVVGSKDSETLYMLSPEG 237
             L  VSMG GVLP +S A     G       +G+L Y+RAHFERV+GS+DSET YM++P+G
Sbjct:   189 LHAVSMGAGVLPVSSGAITEQSGGGGGGQQEGDLTYMRAHFERVIGSRDSETYYMMNPDG 248

Query:   238 NNGPELSIFFVRI 250
             N+GPELSIFFVR+
Sbjct:   249 NSGPELSIFFVRV 261

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

TAIR|locus:2165477 AT5G42680 "AT5G42680" [Arabidopsis thaliana (taxid:3702)]

 Score = 450 (163.5 bits), Expect = 1.5e-42, P = 1.5e-42
 Identities = 90/171 (52%), Positives = 123/171 (71%)

Query:    82 RTPSSSSRKVTGTLFGYRKGKVSLSIQENPKCLPTVIVELAMQTNVLQKEMGSGMVRIAL 141
             R P       TGT+FG+RKG+V L+IQE+P CLP  I+EL M T+ LQKEM S  VRIAL
Sbjct:    68 RRPLLKDYATTGTIFGFRKGRVFLAIQEDPHCLPIFIIELPMLTSALQKEMASETVRIAL 127

Query:   142 ECEKRPEKDKVKLLEEPLWSMFCNGKKTGYGVKRE-ANDEDFHVMELLRPVSMGGGVLP- 199
             E E +  + KV  LEE +W ++CNG+K GY ++R+  ++E+ +V++ LR VSMG GVLP 
Sbjct:   128 ESETKTSRKKV--LEEYVWGIYCNGRKIGYSIRRKNMSEEEMYVIDALRGVSMGAGVLPC 185

Query:   200 GNSDAEGADGELAYIRAHFERVVGSKDSETLYMLSPEGNN-GPELSIFFVR 249
              N   +  +GE+ Y+RA F+RV+GSKDSE LYM++PEG+  G ELSI+F+R
Sbjct:   186 KNQYDQETEGEMTYMRARFDRVIGSKDSEALYMINPEGSGQGTELSIYFLR 236

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

TAIR|locus:2062647 MIZ1 "AT2G41660" [Arabidopsis thaliana (taxid:3702)]

 Score = 425 (154.7 bits), Expect = 6.8e-40, P = 6.8e-40
 Identities = 87/176 (49%), Positives = 117/176 (66%)

Query:    85 SSSSRKVTGTLFGYRKGKVSLSIQENPKCLPTVIVELAMQTNVLQKEMGSGMVRIALECE 144
             SS  R+VTGTL+G+++G V+ S+Q N +  P ++++LAM T  L KEM SG+VRIALECE
Sbjct:   123 SSLGRRVTGTLYGHKRGHVTFSVQYNQRSDPVLLLDLAMSTATLVKEMSSGLVRIALECE 182

Query:   145 KRPEKDKVKLLEEPLWSMFCNGKKTGYGVKR--EANDEDFHVMELLRPVSMGGGVLPGNS 202
             KR  +   KL +EP W+M+CNG+K GY V R     D D+ V+  +  V++G GV+P   
Sbjct:   183 KR-HRSGTKLFQEPKWTMYCNGRKCGYAVSRGGACTDTDWRVLNTVSRVTVGAGVIPTPK 241

Query:   203 ---DAEGAD-----GELAYIRAHFERVVGSKDSETLYMLSPEGNNGPELSIFFVRI 250
                D  G       GEL Y+R  FERVVGS+DSE  YM++P+ N GPELSIF +RI
Sbjct:   242 TIDDVSGVGSGTELGELLYMRGKFERVVGSRDSEAFYMMNPDKNGGPELSIFLLRI 297

GO:0003674 "molecular_function" evidence=ND

GO:0005737 "cytoplasm" evidence=IDA

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0005789 "endoplasmic reticulum membrane" evidence=IDA

GO:0016020 "membrane" evidence=IDA

GO:0032541 "cortical endoplasmic reticulum" evidence=IDA

GO:0009658 "chloroplast organization" evidence=IMP

TAIR|locus:2178312 AT5G23100 "AT5G23100" [Arabidopsis thaliana (taxid:3702)]

 Score = 270 (100.1 bits), Expect = 8.3e-39, Sum P(2) = 8.3e-39
 Identities = 48/101 (47%), Positives = 70/101 (69%)

Query:   153 KLLEEPLWSMFCNGKKTGYGVKREANDEDFHVMELLRPVSMGGGVLPGNSD---AEGADG 209
             +L+EEP+W  +CNGKK G+  +RE  +++  V++ L  VSMG GVLP   +     G  G
Sbjct:   177 RLVEEPMWRTYCNGKKCGFATRRECGEKEKKVLKALEMVSMGAGVLPETEEIGGGGGGGG 236

Query:   210 ELAYIRAHFERVVGSKDSETLYMLSPEGNNGPELSIFFVRI 250
             ++ Y+RA FER+VGS+DSE  YM++P+ N  PELSI+ +RI
Sbjct:   237 DIMYMRAKFERIVGSRDSEAFYMMNPDSNGAPELSIYLLRI 277

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2102360 AT3G25640 "AT3G25640" [Arabidopsis thaliana (taxid:3702)]

 Score = 404 (147.3 bits), Expect = 1.1e-37, P = 1.1e-37
 Identities = 80/171 (46%), Positives = 114/171 (66%)

Query:    90 KVTGTLFGYRKGKVSLSIQENPKCLPTVIVELAMQTNVLQKEMGSGMVRIALECEKRPEK 149
             +V GTLFG R+G V  ++Q++P  LP V+++L   T+VL +EM SG+VRIALE       
Sbjct:    97 RVVGTLFGNRRGHVYFAVQDDPTRLPAVLIQLPTPTSVLVREMASGLVRIALETAAYKTD 156

Query:   150 DKVKLLEEPLWSMFCNGKKTGYGVKREANDEDFHVMELLRPVSMGGGVLPGNS---DAEG 206
              K KLLEE  W  +CNGKK GY  ++E  + ++ V++ + P++MG GVLP  +   D EG
Sbjct:   157 SKKKLLEESTWRTYCNGKKCGYAARKECGEAEWKVLKAVGPITMGAGVLPATTTTVDEEG 216

Query:   207 ------ADGELAYIRAHFERVVGSKDSETLYMLSPE-GNNGPELSIFFVRI 250
                     GEL Y+RA FERVVGS+DSE  YM++P+  + GPELS++F+R+
Sbjct:   217 NGAVGSEKGELMYMRARFERVVGSRDSEAFYMMNPDVSSGGPELSVYFLRV 267

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009506 "plasmodesma" evidence=IDA

TAIR|locus:2065609 AT2G37880 "AT2G37880" [Arabidopsis thaliana (taxid:3702)]

 Score = 373 (136.4 bits), Expect = 2.2e-34, P = 2.2e-34
 Identities = 75/175 (42%), Positives = 114/175 (65%)

Query:    81 IRTPSSSSRK-VTGTLFGYRKGKVSLSIQENPKCL-PTVIVELAMQTNVLQKEMGSGMVR 138
             +  P   S+  V GT+FG RKG V   +Q +   + P +++EL++ T+ L  EMGSG+VR
Sbjct:    70 VTVPQRPSKTMVIGTIFGRRKGHVWFCVQHDRLSVKPILLLELSIATSQLVHEMGSGLVR 129

Query:   139 IALECEKRPEKDKVKLLEEPLWSMFCNGKKTGYGVKREANDEDFHVMELLRPVSMGGGVL 198
             +ALEC  RPE     L   P+W+MFCNG+K G+ V+R AN+E   +++ L  +++G GVL
Sbjct:   130 VALECPTRPELKSCLLRSVPVWTMFCNGRKLGFAVRRSANEETRMMLKRLESMTVGAGVL 189

Query:   199 PGNSDAEGAD----GELAYIRAHFERVVGSKDSETLYMLSPEGNNGPELSIFFVR 249
             P  S   G+D     E+ Y+RA++E VVGS DSE+ ++++P+ N+  ELSIF +R
Sbjct:   190 PSGSGLGGSDESDTDEVMYMRANYEHVVGSSDSESFHLINPDANSAQELSIFLLR 244

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2199577 AT1G21050 "AT1G21050" [Arabidopsis thaliana (taxid:3702)]

 Score = 355 (130.0 bits), Expect = 1.8e-32, P = 1.8e-32
 Identities = 74/174 (42%), Positives = 114/174 (65%)

Query:    80 DIRTPSSSSRKVTGTLFGYRKGKVSLSIQENPK-CLPTVIVELAMQTNVLQKEMGS-GMV 137
             D  + S SS  V+GT FG+R+G+VS  +Q+      P +++ELA+ T  L KEM   G++
Sbjct:    76 DHSSSSQSSSTVSGTFFGHRRGRVSFCLQDAAVGSSPLLLLELAVPTAALAKEMDEEGVL 135

Query:   138 RIALECEKRPEKDK--VKLLEEPLWSMFCNGKKTGYGVKREANDEDFHVMELLRPVSMGG 195
             RIALEC++R   +     + + P+WSMFCNG+K G+ V+R+  + D   + +++ VS+G 
Sbjct:   136 RIALECDRRRSSNSRSSSIFDVPVWSMFCNGRKMGFAVRRKVTENDAVFLRMMQSVSVGA 195

Query:   196 GVLPGNSDAEGADGELAYIRAHFERVVGSKDSETLYMLSPEGNNGPELSIFFVR 249
             GV+P  S+ E    ++ Y+RA FERV GS DSE+ +M++P G+ G ELSIF +R
Sbjct:   196 GVVP--SEEED---QMLYLRARFERVTGSSDSESFHMMNPGGSYGQELSIFLLR 244

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2041238 AT2G22460 "AT2G22460" [Arabidopsis thaliana (taxid:3702)]

 Score = 348 (127.6 bits), Expect = 9.8e-32, P = 9.8e-32
 Identities = 76/169 (44%), Positives = 104/169 (61%)

Query:    82 RTPSS-SSRKVTGTLFGYRKGKVSLSIQENPKCLPT-VIVELAMQTNVLQKEMGSGMVRI 139
             R+ SS SS  VTGT+FGYRKGK++  IQ   K     +++ELA+ T VL +EM  G +RI
Sbjct:    75 RSSSSLSSSTVTGTIFGYRKGKINFCIQTPRKSTNLDLLLELAVPTTVLAREMREGALRI 134

Query:   140 ALECEKRPEKDKVKLLEEPLWSMFCNGKKTGYGVKREANDEDFHVMELLRPVSMGGGVLP 199
              LE     ++D    L +P W+M+CNGK+ GY  KR  + +D   +  L  V +G GV+ 
Sbjct:   135 VLE-RNNEKQDDDSFLSKPFWNMYCNGKRVGYARKRSPSQDDMTALTALSKVVVGAGVVT 193

Query:   200 GNSDAEGADGELAYIRAHFERVVGSKDSETLYMLSPEGNNGPELSIFFV 248
             G  +    D EL Y+RA F RV GSK+SE+ +++ P GN G ELSIF V
Sbjct:   194 GK-ELGRFDDELMYLRASFRRVNGSKESESFHLIDPAGNIGQELSIFIV 241

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00019402001 SubName- Full=Chromosome chr7 scaffold_20, whole genome shotgun sequence; (247 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	250
pfam04759	166	pfam04759, DUF617, Protein of unknown function, DU	2e-95
TIGR01570	161	TIGR01570, A_thal_3588, uncharacterized plant-spec	1e-90

>gnl|CDD|218249 pfam04759, DUF617, Protein of unknown function, DUF617

 Score =  276 bits (708), Expect = 2e-95
 Identities = 100/165 (60%), Positives = 131/165 (79%), Gaps = 5/165 (3%)

Query: 91  VTGTLFGYRKGKVSLSIQENPKCLPTVIVELAMQTNVLQKEMGSGMVRIALECEKRPEKD 150
           VTGTLFG+R+G+V+L+IQE+P+  P +++ELA+ T+ L +EM SG+VRIALECEKRP   
Sbjct: 2   VTGTLFGHRRGRVTLAIQEDPRSPPALLLELAVPTSALVREMASGLVRIALECEKRPGSG 61

Query: 151 KVK----LLEEPLWSMFCNGKKTGYGVKREANDEDFHVMELLRPVSMGGGVLPG-NSDAE 205
                  LLEEP+W+M+CNG+K GY V+REA ++D  V+ELLRPVSMG GVLPG      
Sbjct: 62  GKAAGASLLEEPVWTMYCNGRKVGYAVRREATEDDLRVLELLRPVSMGAGVLPGAGGGGG 121

Query: 206 GADGELAYIRAHFERVVGSKDSETLYMLSPEGNNGPELSIFFVRI 250
           G DGE+ Y+RA FERVVGS+DSE+ YM++P+GN GPELSIFF+R+
Sbjct: 122 GGDGEVMYMRARFERVVGSRDSESFYMINPDGNGGPELSIFFLRV 166

This family represents a conserved region in a number of uncharacterized plant proteins. Length = 166

>gnl|CDD|233472 TIGR01570, A_thal_3588, uncharacterized plant-specific domain TIGR01570

 Score =  264 bits (676), Expect = 1e-90
 Identities = 98/161 (60%), Positives = 123/161 (76%), Gaps = 1/161 (0%)

Query: 91  VTGTLFGYRKGKVSLSIQENPKCLPTVIVELAMQTNVLQKEMGSGMVRIALECEKRPEKD 150
           VTGT+FGYRKG+V+  IQE+ + LP +++ELAM T+VLQKEM SG+VRIALECE R +  
Sbjct: 1   VTGTIFGYRKGRVNFCIQEDRRSLPILLLELAMPTSVLQKEMSSGLVRIALECETRKQDK 60

Query: 151 KVKLLEEPLWSMFCNGKKTGYGVKREANDEDFHVMELLRPVSMGGGVLPGNSDAEGAD-G 209
             KLL EP+W+M+CNG+K GY VKR A++ED  V+  L  VS+G GVLP   +  G D  
Sbjct: 61  DSKLLSEPVWTMYCNGRKVGYAVKRSASEEDMTVLTALSKVSVGAGVLPCGKELGGFDED 120

Query: 210 ELAYIRAHFERVVGSKDSETLYMLSPEGNNGPELSIFFVRI 250
           EL Y+RA FERVVGSKDSE+ YM++PEGN G ELSIFF+R 
Sbjct: 121 ELMYMRASFERVVGSKDSESFYMINPEGNIGQELSIFFLRS 161

This model represents a region of about 170 amino acids found at the C-terminus of a family of plant proteins. These proteins typically have additional highly divergent N-terminal regions rich in low complexity sequence. PSI-BLAST reveals no clear similarity to any characterized protein. At least 12 distinct members are found in Arabidopsis thaliana. Length = 161

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	250
PF04759	166	DUF617: Protein of unknown function, DUF617; Inter	100.0
TIGR01570	161	A_thal_3588 uncharacterized plant-specific domain	100.0

>PF04759 DUF617: Protein of unknown function, DUF617; InterPro: IPR006460 This family of hypothetical plant proteins are defined by a region of about 170 amino acids found at the C terminus

Probab=100.00  E-value=5.3e-97  Score=629.66  Aligned_cols=161  Identities=64%  Similarity=1.156  Sum_probs=153.1

Q ss_pred             eeEEEeecccCCceeeeeecCCCCCCeeEeeeccchhHHHHHhccCceeEEEeeccCCCcCc----ccccccceeeeeec
Q 025615           90 KVTGTLFGYRKGKVSLSIQENPKCLPTVIVELAMQTNVLQKEMGSGMVRIALECEKRPEKDK----VKLLEEPLWSMFCN  165 (250)
Q Consensus        90 ~vTGTlFG~RrGrV~~aiQedp~~~P~lllELa~pT~~L~~EM~~G~vRIaLEcek~~~~~~----~~Ll~ep~WtmyCN  165 (250)
                      +|||||||||||||+||||+||++.|+||||||+||++|+|||++|+|||||||||++..++    .+||+||+|+||||
T Consensus         1 rvtGTlFG~RrGrV~~aiQ~d~~s~P~lllELa~pT~~L~~EM~~GlvRIaLEc~k~~~~~~~~~~~~Ll~ep~W~myCN   80 (166)
T PF04759_consen    1 RVTGTLFGHRRGRVSFAIQEDPRSPPILLLELAMPTSALVREMASGLVRIALECEKRKGKSKGAASGSLLEEPVWTMYCN   80 (166)
T ss_pred             CcEEEEEecccceEEEEEecCCCCCCeEEEEecCcHHHHHHHhhcCeEEEEEEecCCCCCCCcccccccccceeEEEEEC
Confidence            69999999999999999999999999999999999999999999999999999999875544    36999999999999


Q ss_pred             CeeeeeeeeccCChhhHHHHHhhhccccccceecC-CCCCCCCCCceeeeeeccceeeecCCcceeeeecCCCCCCCceE
Q 025615          166 GKKTGYGVKREANDEDFHVMELLRPVSMGGGVLPG-NSDAEGADGELAYIRAHFERVVGSKDSETLYMLSPEGNNGPELS  244 (250)
Q Consensus       166 GrK~GyAvRRe~t~~D~~VL~~l~~VSmGAGVLP~-~~~~~~~dgEl~YMRA~FERVVGS~DSEsfyMinPdg~~GpELS  244 (250)
                      ||||||||||+|||+||+||++|++|||||||||+ +...++.|||||||||+|||||||+|||||||||||||+|||||
T Consensus        81 GrK~GyAvRRe~t~~d~~vL~~l~~VS~GAGVlP~~~~~~~~~~gel~YMRA~FERVVGS~DSEsfyminPdg~~GpELS  160 (166)
T PF04759_consen   81 GRKVGYAVRREPTDDDLHVLELLRSVSMGAGVLPGGGGGSGGGDGELMYMRARFERVVGSRDSESFYMINPDGNGGPELS  160 (166)
T ss_pred             CceeeeeEEcCCCHHHHHHHHhhheeeecceeccCccccCCCCCceEeeeeeeeeeeeccCCcceeEEECCCCCCCceEE
Confidence            99999999999999999999999999999999999 33345789999999999999999999999999999999999999


Q ss_pred             EEEEeC
Q 025615          245 IFFVRI  250 (250)
Q Consensus       245 IFf~Ri  250 (250)
                      |||+||
T Consensus       161 IFf~Rv  166 (166)
T PF04759_consen  161 IFFLRV  166 (166)
T ss_pred             EEEEeC
Confidence            999997

These proteins have highly divergent N-terminal regions rich in low complexity sequence. PSI-BLAST reveals no clear similarity to any characterised protein. At least 12 distinct members are found in Arabidopsis thaliana (Mouse-ear cress).

>TIGR01570 A_thal_3588 uncharacterized plant-specific domain TIGR01570

Probab=100.00  E-value=5.4e-96  Score=620.70  Aligned_cols=160  Identities=61%  Similarity=1.054  Sum_probs=152.0

Q ss_pred             eEEEeecccCCceeeeeecCCCCCCeeEeeeccchhHHHHHhccCceeEEEeeccCCCcCcccccccceeeeeecCeeee
Q 025615           91 VTGTLFGYRKGKVSLSIQENPKCLPTVIVELAMQTNVLQKEMGSGMVRIALECEKRPEKDKVKLLEEPLWSMFCNGKKTG  170 (250)
Q Consensus        91 vTGTlFG~RrGrV~~aiQedp~~~P~lllELa~pT~~L~~EM~~G~vRIaLEcek~~~~~~~~Ll~ep~WtmyCNGrK~G  170 (250)
                      |||||||||||||+||||+||+|.|+||||||+||++|+|||++|+|||||||||++..++.+||+||+|+|||||||||
T Consensus         1 vtGTlfG~RrgrV~~~iQ~dp~~~P~lllELa~pt~~L~~Em~~G~vRIaLEc~k~~~~~~~~ll~ep~W~myCNGrk~G   80 (161)
T TIGR01570         1 VTGTIFGYRKGRVNFCIQEDRRSLPILLLELAMPTSVLQKEMSSGLVRIALECETRKQDKDSKLLSEPVWTMYCNGRKVG   80 (161)
T ss_pred             CeEEEecCCCCcceeeecCCCCCCCeeeeeecCcHHHHHHHhhcCceeEEeeeeccccCCCccceeeeeEEEEECCceee
Confidence            79999999999999999999999999999999999999999999999999999998766678999999999999999999


Q ss_pred             eeeeccCChhhHHHHHhhhccccccceecCCCCCCCCC-CceeeeeeccceeeecCCcceeeeecCCCCCCCceEEEEEe
Q 025615          171 YGVKREANDEDFHVMELLRPVSMGGGVLPGNSDAEGAD-GELAYIRAHFERVVGSKDSETLYMLSPEGNNGPELSIFFVR  249 (250)
Q Consensus       171 yAvRRe~t~~D~~VL~~l~~VSmGAGVLP~~~~~~~~d-gEl~YMRA~FERVVGS~DSEsfyMinPdg~~GpELSIFf~R  249 (250)
                      |||||+|||+||+||++|++|||||||||+....++.| ||||||||+|||||||||||||||||||||+||||||||+|
T Consensus        81 yAvRR~~t~~d~~vL~~l~~VS~GAGVlP~~~~~~~~~~gel~YMRA~FERVVGS~DSEsfyminPdg~~gpELSIF~lR  160 (161)
T TIGR01570        81 YAVKRSASEEDMTVLTALSKVSVGAGVLPCGKELGGFDEDELMYMRASFERVVGSKDSESFYMINPEGNIGQELSIFFLR  160 (161)
T ss_pred             EeEecCCCHHHHHHHHhhheeeecceeccCCCCCCCCCCceEEEEeeeeeEeccccCceeEEeECCCCCCCceEEEEEEe
Confidence            99999999999999999999999999999643333445 99999999999999999999999999999999999999999


Q ss_pred             C
Q 025615          250 I  250 (250)
Q Consensus       250 i  250 (250)
                      +
T Consensus       161 ~  161 (161)
T TIGR01570       161 S  161 (161)
T ss_pred             C
Confidence            6

This model represents a region of about 170 amino acids found at the C-terminus of a family of plant proteins. These proteins typically have additional highly divergent N-terminal regions rich in low complexity sequence. PSI-BLAST reveals no clear similarity to any characterized protein. At least 12 distinct members are found in Arabidopsis thaliana.

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00