Citrus Sinensis ID: 025752
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 248 | ||||||
| 192764525 | 399 | PAE [Litchi chinensis] | 0.737 | 0.458 | 0.868 | 3e-93 | |
| 296085487 | 399 | unnamed protein product [Vitis vinifera] | 0.737 | 0.458 | 0.792 | 2e-84 | |
| 449530546 | 398 | PREDICTED: protein notum homolog [Cucumi | 0.733 | 0.457 | 0.747 | 3e-82 | |
| 449465671 | 539 | PREDICTED: protein notum homolog [Cucumi | 0.709 | 0.326 | 0.761 | 3e-81 | |
| 356531535 | 449 | PREDICTED: protein notum homolog [Glycin | 0.709 | 0.391 | 0.772 | 4e-81 | |
| 357517413 | 396 | Notum-like protein [Medicago truncatula] | 0.705 | 0.441 | 0.772 | 1e-80 | |
| 356496473 | 449 | PREDICTED: protein notum homolog [Glycin | 0.709 | 0.391 | 0.761 | 8e-80 | |
| 1431629 | 399 | pectinacetylesterase precursor [Vigna ra | 0.737 | 0.458 | 0.726 | 1e-78 | |
| 217073868 | 393 | unknown [Medicago truncatula] gi|3884980 | 0.705 | 0.445 | 0.761 | 2e-78 | |
| 356559067 | 414 | PREDICTED: uncharacterized protein LOC10 | 0.737 | 0.442 | 0.710 | 7e-78 |
| >gi|192764525|gb|ACF05806.1| PAE [Litchi chinensis] | Back alignment and taxonomy information |
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Score = 347 bits (889), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 159/183 (86%), Positives = 169/183 (92%)
Query: 66 HIEQFYAQVVATHGSAKHLPASCTSRLSPGLCFFPQYMARQITTPLFIINAAYDSWQIKN 125
HIE FY +VVATHGSAK+LPASCTSRL PGLCFFPQYMARQI TPLFIINAAYDSWQIKN
Sbjct: 217 HIEAFYNEVVATHGSAKNLPASCTSRLKPGLCFFPQYMARQIQTPLFIINAAYDSWQIKN 276
Query: 126 ILAPGVADPHGTWHSCKLDINNCSPTQLQTMQSFRTQFLNALAGLGISSSRGMFIDACYA 185
ILAPGVADPHGTWHSCKLDINNCSP QLQTMQSFR QFL+AL+GLG S+S+G+FID+CYA
Sbjct: 277 ILAPGVADPHGTWHSCKLDINNCSPNQLQTMQSFRLQFLDALSGLGNSTSKGLFIDSCYA 336
Query: 186 HCQTEMQETWLRTDSPVLGKMSIAKAVGDWYYDRSPFQKIDCAYPCNPTCHNRVFDSNVH 245
HCQTEMQETWLR DSPVLGK +IAKAVGDWYYDRSPFQKIDC YPCNPTCHNRVFD + H
Sbjct: 337 HCQTEMQETWLRDDSPVLGKTTIAKAVGDWYYDRSPFQKIDCPYPCNPTCHNRVFDPDDH 396
Query: 246 SEV 248
V
Sbjct: 397 PGV 399
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Source: Litchi chinensis Species: Litchi chinensis Genus: Litchi Family: Sapindaceae Order: Sapindales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|296085487|emb|CBI29219.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|449530546|ref|XP_004172255.1| PREDICTED: protein notum homolog [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|449465671|ref|XP_004150551.1| PREDICTED: protein notum homolog [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|356531535|ref|XP_003534333.1| PREDICTED: protein notum homolog [Glycine max] | Back alignment and taxonomy information |
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| >gi|357517413|ref|XP_003628995.1| Notum-like protein [Medicago truncatula] gi|355523017|gb|AET03471.1| Notum-like protein [Medicago truncatula] | Back alignment and taxonomy information |
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| >gi|356496473|ref|XP_003517092.1| PREDICTED: protein notum homolog [Glycine max] | Back alignment and taxonomy information |
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| >gi|1431629|emb|CAA67728.1| pectinacetylesterase precursor [Vigna radiata var. radiata] | Back alignment and taxonomy information |
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| >gi|217073868|gb|ACJ85294.1| unknown [Medicago truncatula] gi|388498020|gb|AFK37076.1| unknown [Medicago truncatula] | Back alignment and taxonomy information |
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| >gi|356559067|ref|XP_003547823.1| PREDICTED: uncharacterized protein LOC100781246 [Glycine max] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 248 | ||||||
| TAIR|locus:2140436 | 397 | AT4G19420 "AT4G19420" [Arabido | 0.705 | 0.440 | 0.691 | 3e-91 | |
| TAIR|locus:2158495 | 391 | AT5G45280 "AT5G45280" [Arabido | 0.685 | 0.434 | 0.543 | 9.7e-72 | |
| TAIR|locus:2140431 | 391 | AT4G19410 [Arabidopsis thalian | 0.685 | 0.434 | 0.543 | 3.3e-71 | |
| TAIR|locus:2206490 | 444 | AT1G57590 "AT1G57590" [Arabido | 0.701 | 0.391 | 0.494 | 3.3e-63 | |
| TAIR|locus:2146814 | 416 | AT5G26670 "AT5G26670" [Arabido | 0.701 | 0.418 | 0.511 | 3.7e-62 | |
| TAIR|locus:2074459 | 415 | AT3G05910 "AT3G05910" [Arabido | 0.701 | 0.419 | 0.5 | 2.3e-60 | |
| TAIR|locus:2097973 | 419 | AT3G62060 "AT3G62060" [Arabido | 0.705 | 0.417 | 0.465 | 7.8e-58 | |
| TAIR|locus:2041429 | 416 | AT2G46930 "AT2G46930" [Arabido | 0.701 | 0.418 | 0.442 | 9.9e-56 | |
| TAIR|locus:2172833 | 451 | AT5G23870 "AT5G23870" [Arabido | 0.697 | 0.383 | 0.463 | 8.8e-55 | |
| TAIR|locus:2083569 | 427 | AT3G09410 "AT3G09410" [Arabido | 0.701 | 0.407 | 0.431 | 1.8e-52 |
| TAIR|locus:2140436 AT4G19420 "AT4G19420" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 702 (252.2 bits), Expect = 3.0e-91, Sum P(2) = 3.0e-91
Identities = 121/175 (69%), Positives = 145/175 (82%)
Query: 66 HIEQFYAQVVATHGSAKHLPASCTSRLSPGLCFFPQYMARQITTPLFIINAAYDSWQIKN 125
+I+ ++ VV HGSAK+LP SCTSRL+P +CFFPQY+ARQI TPLFI+NAAYDSWQIKN
Sbjct: 215 YIKTYFEDVVTLHGSAKNLPRSCTSRLTPAMCFFPQYVARQIRTPLFILNAAYDSWQIKN 274
Query: 126 ILAPGVADPHGTWHSCKLDINNCSPTQLQTMQSFRTQFLNALAGLGISSSRGMFIDACYA 185
ILAP ADP+G W SC+LDI NC P+Q++ MQ FR +FL+A+ GLG SSSRGMFID+CY
Sbjct: 275 ILAPRAADPYGKWQSCQLDIKNCHPSQIKVMQDFRLEFLSAVIGLGRSSSRGMFIDSCYT 334
Query: 186 HCQTEMQETWLRTDSPVLGKMSIAKAVGDWYYDRSPFQKIDCAYPCNPTCHNRVF 240
HCQTE Q +W DSP+L + +IAKAVGDW YDR+ FQKIDC YPCNPTCH+RVF
Sbjct: 335 HCQTETQTSWFWQDSPILNRTTIAKAVGDWVYDRTLFQKIDCPYPCNPTCHHRVF 389
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| TAIR|locus:2158495 AT5G45280 "AT5G45280" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2140431 AT4G19410 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2206490 AT1G57590 "AT1G57590" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2146814 AT5G26670 "AT5G26670" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2074459 AT3G05910 "AT3G05910" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2097973 AT3G62060 "AT3G62060" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2041429 AT2G46930 "AT2G46930" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2172833 AT5G23870 "AT5G23870" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2083569 AT3G09410 "AT3G09410" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 248 | |||
| pfam03283 | 362 | pfam03283, PAE, Pectinacetylesterase | 4e-74 | |
| pfam03283 | 362 | pfam03283, PAE, Pectinacetylesterase | 6e-19 |
| >gnl|CDD|217474 pfam03283, PAE, Pectinacetylesterase | Back alignment and domain information |
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Score = 229 bits (585), Expect = 4e-74
Identities = 88/160 (55%), Positives = 114/160 (71%), Gaps = 4/160 (2%)
Query: 66 HIEQFYAQVVATHGSAKHLPASCTSRLSPGLCFFPQYMARQITTPLFIINAAYDSWQIKN 125
+ +FY+ VV S K+LP SCT +L+P CFFPQY+ I TP+FI+N+AYDSWQI+N
Sbjct: 207 SLRRFYSGVVGLQNSEKNLPESCTVKLNPTECFFPQYLIEYIKTPIFILNSAYDSWQIQN 266
Query: 126 ILAPGVADPHGTWHSCKLDINNCSPTQLQTMQSFRTQFLNALAGLGISSSRGMFIDACYA 185
ILAP P G+W SCKLD+ CS +QLQ +Q FR + L+AL G S G+FI +C+A
Sbjct: 267 ILAP----PSGSWISCKLDLQPCSSSQLQFLQGFRNKMLDALKGFSNSKDNGLFIPSCFA 322
Query: 186 HCQTEMQETWLRTDSPVLGKMSIAKAVGDWYYDRSPFQKI 225
HCQ+E Q+TW TDSPV+G +IAKAVGDWY+DR + I
Sbjct: 323 HCQSERQDTWFATDSPVVGGKTIAKAVGDWYFDRKEVKLI 362
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Length = 362 |
| >gnl|CDD|217474 pfam03283, PAE, Pectinacetylesterase | Back alignment and domain information |
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Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 248 | |||
| KOG4287 | 402 | consensus Pectin acetylesterase and similar protei | 100.0 | |
| PF03283 | 361 | PAE: Pectinacetylesterase | 100.0 |
| >KOG4287 consensus Pectin acetylesterase and similar proteins [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
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Probab=100.00 E-value=1.3e-90 Score=640.25 Aligned_cols=233 Identities=52% Similarity=1.049 Sum_probs=224.5
Q ss_pred HHHHHHHHHHHHHhcCceeeeEEeccccccCceecCCCCCceeccCCCCCCcchHHHHHH--------------------
Q 025752 9 WLNLLVCALILLKADGFNVGITYVENAVVKGAVCLDGSPPAYHFDKGFGAGINNWLVHIE-------------------- 68 (248)
Q Consensus 9 ~~~~~~~~l~~~~~~~~~v~~tl~~~a~~~gA~ClDGs~p~y~~~~G~g~g~~~wl~~~e-------------------- 68 (248)
|...++...+.+..++.+|+||||+.|++|||||||||+|||||+||+|||+||||||||
T Consensus 20 ~s~~lv~~~~~~~s~~~~v~ltli~~A~akGAvClDGSlpgYhl~~g~GSg~n~wliqlegGgwC~~i~sCv~Rk~tr~G 99 (402)
T KOG4287|consen 20 WSIPLVFGSLVIGSPGLMVPLTLIRGAAAKGAVCLDGSLPGYHLHRGSGSGANNWLIQLEGGGWCNNIRSCVYRKMTRLG 99 (402)
T ss_pred hhhhhhhhhhcccCccccchhHHHhhHhhcCceecCCCCcceeeccCCCccccceeEecccccccccchhHHHHhhcccc
Confidence 555566666666667789999999999999999999999999999999999999999999
Q ss_pred --------------------------------------------------------------------------------
Q 025752 69 -------------------------------------------------------------------------------- 68 (248)
Q Consensus 69 -------------------------------------------------------------------------------- 68 (248)
T Consensus 100 SS~~mek~~~FtGILS~k~~eNPdF~NWNrVkvRYCDGasFsGd~e~~~~t~l~fRG~rIw~av~~eLl~kGms~Ak~al 179 (402)
T KOG4287|consen 100 SSNYMEKELAFTGILSNKPSENPDFYNWNRVKVRYCDGASFSGDSENKNATQLQFRGARIWLAVMDELLAKGMSNAKQAL 179 (402)
T ss_pred ccccchhhcceeEEecCCcccCCcccccceeEEeecCCCcccCcccccchhhhhhhHHHHHHHHHHHHHHhhhhHHHHHH
Confidence
Q ss_pred --------------------------------------------------HHHHHHHHHhcCCCccccccccCCCCcccC
Q 025752 69 --------------------------------------------------QFYAQVVATHGSAKHLPASCTSRLSPGLCF 98 (248)
Q Consensus 69 --------------------------------------------------~~~~~vv~l~g~~~~lp~~C~~~~~p~kCf 98 (248)
++|++||++||++|+||+.|+++.+|++||
T Consensus 180 LsGcSAGGLa~iLhCD~Fr~~lp~~t~VKClSDaG~FLd~~dv~g~~t~~~~~~~vv~lqg~~k~Lp~~Ct~~~~p~~Cf 259 (402)
T KOG4287|consen 180 LSGCSAGGLASILHCDEFRELLPPTTKVKCLSDAGFFLDAKDVSGGPTLRSYYAGVVTLQGLQKNLPQSCTSHLEPSLCF 259 (402)
T ss_pred hhcCCccchhheeehHHHHhhCCCCceeEEecccceeeecccccCCcchhhhhhhheeeecccccCCHHHHhcCCchhhc
Confidence 999999999999999999999999999999
Q ss_pred chhhhhhccCCChhhhhhhhhHHHHhhccCCCCCCCCCCcccccCCCCCCCHHHHHHHHHHHHHHHHHHhhccCCCCCeE
Q 025752 99 FPQYMARQITTPLFIINAAYDSWQIKNILAPGVADPHGTWHSCKLDINNCSPTQLQTMQSFRTQFLNALAGLGISSSRGM 178 (248)
Q Consensus 99 Fpq~~~~~I~TPlFilnsaYD~WQi~nil~p~~~dp~g~W~~Ck~~~~~Cs~~Ql~~lq~fr~~~l~aL~~~~~~~~~G~ 178 (248)
||||++++||||+||+|++||+|||++.|+|+++||+|.|+.||+|+..|+++|++++|+||.+||.+++.+.+++++|+
T Consensus 260 Fpq~v~~~irtP~F~vN~afD~wQi~~~laP~s~d~~g~w~~ckl~~~~c~~~q~~~~qgFr~~ml~a~~~f~~~~~~g~ 339 (402)
T KOG4287|consen 260 FPQYVLKTIRTPVFLVNAAFDSWQIQNSLAPTSADPSGSWKYCKLNHRECTAAQIDFLQGFRPQMLDAVKIFSSSKQNGL 339 (402)
T ss_pred chHHHHhhcCCceEehhhhhhHHhccCCCCCCCCCcccchhhcccccccCCHHHHHHHHHHHHHHHHHhhhheecccCCe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecCcccccccccccccccCCccccCCccHHHHhhhhhccCCCceeeccCCCCCCCCCCCCcC
Q 025752 179 FIDACYAHCQTEMQETWLRTDSPVLGKMSIAKAVGDWYYDRSPFQKIDCAYPCNPTCHNRVFD 241 (248)
Q Consensus 179 Fi~SC~~Hcqs~~~~tW~~~~sp~i~~kTia~AvgdWyf~r~~~~~IDC~yPCNpTC~~~~~~ 241 (248)
||+||++|||+++++||+++++|+++|||||+|||||||+|..+|+|||||||||||||++|.
T Consensus 340 finsc~aHCq~~~~~tW~~~~sp~i~~k~iA~aVgdWyf~R~~vklIDCPyPCn~tC~nl~~~ 402 (402)
T KOG4287|consen 340 FINSCFAHCQTERQDTWFADDSPAIKNKTIAEAVGDWYFDRAKVKLIDCPYPCNPTCHNLSFE 402 (402)
T ss_pred eechHHHhhcccccccccCCCCccccCchhhhhhcceecccceeeeccCCCCCCCCCccccCC
Confidence 999999999999999999999999999999999999999998899999999999999999874
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| >PF03283 PAE: Pectinacetylesterase | Back alignment and domain information |
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Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
No hit with e-value below 0.005
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00