Citrus Sinensis ID: 025805

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------25
Protein Sequence
METFLNQTLIAVLISSLIAIRSYRRKSLNFSGAVSGFIVMTAHIAAGSRFGALLLVFFFTSSKLTKVGEERKRRVDADFKEGGQRNWIQVLSNSGIAAVLVVIVWKLTGQQDKCLDSKELPLVTSLIGGILGHYCCCNGDTWSSELGVLSDEQPRLITTFKPVRRGTNGGVTKAGLLAAVAAGSVIGLTFVLFGFFTATCTRDIALKQLLVIPISAIAGLCGSLIDSLLGATLQFSGFCSVRNKVNVL
Secondary Structure (PSIPRED)
cHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHcHHHHHHccccccccccccHHHHHHcHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHcccccccccccccccccEEEEccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcEEEccccccEEcc
Secondary Structure Prediction (SSPRO)
ccccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHcHHHHHHHcHHHcccccccHHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHcccHHHHHHHccccccEEEEEccEccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccEEEEc
Coil and Loop (DISEMBL)
METFLNQTLIAVLISSLIAIRSYRRKSLNFSGAVSGFIVMTAHIAAGSRFGALLLVFFFTSSKLTKVGEERKRRVDadfkeggqrnWIQVLSNSGIAAVLVVIVWKLTgqqdkcldskelplvtSLIGGilghycccngdtwsselgvlsdeqprlittfkpvrrgtnggvtKAGLLAAVAAGSVIGLTFVLFGFFTATCTRDIALKQLLVIPISAIAGLCGSLIDSLLGATLQFSGfcsvrnkvnvl
Flexible Loop (DISEMBL)
METFLNQTLIAVLISSLIAIRSYRRKSLNFSGAVSGFIVMTAHIAAGSRFGALLLVFFFTsskltkvgeerkrrvdadfkeggqrnwiqVLSNSGIAAVLVVIVWKLTGQQDKCLDSKELPLVTSLIGGILGHYCCCNGDTWSSELGVLSDEQPRLIttfkpvrrgtngGVTKAGLLAAVAAGSVIGLTFVLFGFFTATCTRDIALKQLLVIPISAIAGLCGSLIDSLLGATLQFsgfcsvrnkvnvl
Low Complexity Region (SEG)
METFLNQTliavlissliaiRSYRRKSLNFSGAVSGFIVMTAHIAAGSRFGALLLVFFFTSSKLTKVGEERKRRVDADFKEGGQRNWIQVLSNSGIAAVLVVIVWKLTGQQDKCLDSKELPLVTSLIGGILGHYCCCNGDTWSSELGVLSDEQPRLITTFKPVRRGTNggvtkagllaavaagsviglTFVLFGFFTATCTRDIALKQLLVIPISAIAGLCGSLIDSLLGATLQFSGFCSVRNKVNVL
Disordered region (IsUnstruct)
***FLNQTLIAVLISSLIAIRSYRRKSLNFSGAVSGFIVMTAHIAAGSRFGALLLVFFFTSSKLTKVG*******DADFKEGGQRNWIQVLSNSGIAAVLVVIVWKLTGQQDKCLDSKELPLVTSLIGGILGHYCCCNGDTWSSELGVLSDEQPRLITTFKPVRRGTNGGVTKAGLLAAVAAGSVIGLTFVLFGFFTATCTRDIALKQLLVIPISAIAGLCGSLIDSLLGATLQFSGFCSVRN*****
Disordered Region (DISOPRED)
**TFLNQTLIAVLISSLIAIRSYRRKSLNFSGAVSGFIVMTAHIAAGSRFGALLLVFFFTSSKLTKVGEER*************RNWIQVLSNSGIAAVLVVIVWKLTGQQDKCLDSKELPLVTSLIGGILGHYCCCNGDTWSSELGVLSDEQPRLITTFKPVRRGTNGGVTKAGLLAAVAAGSVIGLTFVLFGFFTATCTRDIALKQLLVIPISAIAGLCGSLIDSLLGATLQFSGFCSVRNKVNVL
Disordered Region (DISEMBL)
METFLNQTLIAVLISSLIAIRSYRRKSLNFSGAVSGFIVMTAHIAAGSRFGALLLVFFFTSSKLTKVGEERKRRVDADFKEGGQRNWIQVLSNSGIAAVLVVIVWKLTGQQDKCLDSKELPLVTSLIGGILGHYCCCNGDTWSSELGVLSDEQPRLITTFKPVRRGTNGGVTKAGLLAAVAAGSVIGLTFVLFGFFTATCTRDIALKQLLVIPISAIAGLCGSLIDSLLGATLQFSGFCSVRNKVNVL
Disordered Region (DISPRO)
**TFLNQTLIAVLISSLIAIRSYRRKSLNFSGAVSGFIVMTAHIAAGSRFGALLLVFFFTSSKLTKVGEERKRRVDADFKEGGQRNWIQVLSNSGIAAVLVVIVWKLTGQQDKCLDSKELPLVTSLIGGILGHYCCCNGDTWSSELGVLSDEQPRLITTFKPVRRGTNGGVTKAGLLAAVAAGSVIGLTFVLFGFFTATCTRDIALKQLLVIPISAIAGLCGSLIDSLLGATLQFSGFCSVRNKVNVL
Transmembrane Helix (TMHMM)
oooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooHHHHHHHHHHHHHHHHHHHHiiHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
METFLNQTLIAVLISSLIAIRSYRRKSLNFSGAVSGFIVMTAHIAAGSRFGALLLVFFFTSSKLTKVGEERKRRVDADFKEGGQRNWIQVLSNSGIAAVLVVIVWKLTGQQDKCLDSKELPLVTSLIGGILGHYCCCNGDTWSSELGVLSDEQPRLITTFKPVRRGTNGGVTKAGLLAAVAAGSVIGLTFVLFGFFTATCTRDIALKQLLVIPISAIAGLCGSLIDSLLGATLQFSGFCSVRNKVNVL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	248	2.2.26 [Sep-21-2011]
Q5RF73	336	Transmembrane protein 19	yes	no	0.923	0.681	0.393	5e-38
Q96HH6	336	Transmembrane protein 19	yes	no	0.923	0.681	0.389	1e-37
Q0P4L9	336	Transmembrane protein 19	yes	no	0.951	0.702	0.386	3e-37
Q6P726	351	Transmembrane protein 19	yes	no	0.883	0.623	0.407	1e-36
Q91W52	336	Transmembrane protein 19	yes	no	0.919	0.678	0.386	1e-35
Q6IR76	336	Transmembrane protein 19	N/A	no	0.939	0.693	0.394	2e-32
Q58343	238	Uncharacterized membrane	yes	no	0.790	0.823	0.302	1e-11

>sp|Q5RF73|TMM19_PONAB Transmembrane protein 19 OS=Pongo abelii GN=TMEM19 PE=2 SV=1

 Score =  157 bits (398), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 91/231 (39%), Positives = 135/231 (58%), Gaps = 2/231 (0%)

Query: 9   LIAVLISSLIAIRSYRRKSLNFSGAVSGFIVMTAHIAAGSRFGALLLVFFFTSSKLTKVG 68
           L +V++  LI     ++KSL+ SGA+ G +V      A   F   LL+FF +SSKLTK  
Sbjct: 55  LFSVVVPVLIISNGLKKKSLDHSGALGGLVVGFILTIANFSFFTSLLMFFLSSSKLTKWK 114

Query: 69  EERKRRVDADFKEGGQRNWIQVLSNSGIAAVLVVIVWKLTGQQDKCLDSKELPLVTSLIG 128
            E K+R+D+++KEGGQRNWIQV  N  +   L ++     G  +  +D  +    + +  
Sbjct: 115 GEMKKRLDSEYKEGGQRNWIQVFCNGAVPTELALLYMIENGPGEIPVDFSKQYSASWMCL 174

Query: 129 GILGHYCCCNGDTWSSELG-VLSDEQPRLITTFKPVRRGTNGGVTKAGLLAAVAAGSVIG 187
            +L    C  GDTW+SE+G VLS   PRLITT++ V  GTNGGVT  GL++++  G+ +G
Sbjct: 175 SLLAALACSAGDTWASEVGPVLSKSPPRLITTWEKVPVGTNGGVTVVGLVSSLLGGTFVG 234

Query: 188 LTFVLFGFFTATCTRDIALKQLLVIPISAIAGLCGSLIDSLLGATLQFSGF 238
           + + L          DI+  Q  +I    +AGL GS++DS LGAT+Q++G 
Sbjct: 235 IAYFLTQLIFVN-DLDISAPQWPIIAFGGLAGLLGSIVDSYLGATMQYTGL 284

Pongo abelii (taxid: 9601)

>sp|Q96HH6|TMM19_HUMAN Transmembrane protein 19 OS=Homo sapiens GN=TMEM19 PE=2 SV=1

 Score =  156 bits (395), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 90/231 (38%), Positives = 135/231 (58%), Gaps = 2/231 (0%)

Query: 9   LIAVLISSLIAIRSYRRKSLNFSGAVSGFIVMTAHIAAGSRFGALLLVFFFTSSKLTKVG 68
           L +V++  LI     ++KSL+ SGA+ G +V      A   F   LL+FF +SSKLTK  
Sbjct: 55  LFSVVVPVLIVSNGLKKKSLDHSGALGGLVVGFILTIANFSFFTSLLMFFLSSSKLTKWK 114

Query: 69  EERKRRVDADFKEGGQRNWIQVLSNSGIAAVLVVIVWKLTGQQDKCLDSKELPLVTSLIG 128
            E K+R+D+++KEGGQRNW+QV  N  +   L ++     G  +  +D  +    + +  
Sbjct: 115 GEVKKRLDSEYKEGGQRNWVQVFCNGAVPTELALLYMIENGPGEIPVDFSKQYSASWMCL 174

Query: 129 GILGHYCCCNGDTWSSELG-VLSDEQPRLITTFKPVRRGTNGGVTKAGLLAAVAAGSVIG 187
            +L    C  GDTW+SE+G VLS   PRLITT++ V  GTNGGVT  GL++++  G+ +G
Sbjct: 175 SLLAALACSAGDTWASEVGPVLSKSSPRLITTWEKVPVGTNGGVTVVGLVSSLLGGTFVG 234

Query: 188 LTFVLFGFFTATCTRDIALKQLLVIPISAIAGLCGSLIDSLLGATLQFSGF 238
           + + L          DI+  Q  +I    +AGL GS++DS LGAT+Q++G 
Sbjct: 235 IAYFLTQLIFVN-DLDISAPQWPIIAFGGLAGLLGSIVDSYLGATMQYTGL 284

Homo sapiens (taxid: 9606)

>sp|Q0P4L9|TMM19_XENTR Transmembrane protein 19 OS=Xenopus tropicalis GN=tmem19 PE=2 SV=1

 Score =  155 bits (391), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 92/238 (38%), Positives = 137/238 (57%), Gaps = 2/238 (0%)

Query: 9   LIAVLISSLIAIRSYRRKSLNFSGAVSGFIVMTAHIAAGSRFGALLLVFFFTSSKLTKVG 68
           L++VL   +I     +++SL+ SGA+ G +V      A   F + LL FFF SSKLTK  
Sbjct: 55  LVSVLTPIIIVWHGIKKRSLDNSGALGGLLVGFILTIANYSFFSALLTFFFISSKLTKWK 114

Query: 69  EERKRRVDADFKEGGQRNWIQVLSNSGIAAVLVVIVWKLTGQQDKCLDSKELPLVTSLIG 128
            E K+  D+++KEGGQRNW+QV  N G+ A L ++     G  +  +D  +    + +  
Sbjct: 115 GEVKKCYDSEYKEGGQRNWVQVFCNGGLPAELALLYMIENGPGEIPIDFSKEYTASWMCL 174

Query: 129 GILGHYCCCNGDTWSSELG-VLSDEQPRLITTFKPVRRGTNGGVTKAGLLAAVAAGSVIG 187
            +LG      GDTW+SE+G VLS   PRLITT++ V  GTNGGVT  GL++++  G+ +G
Sbjct: 175 SLLGALASSAGDTWASEIGPVLSKSSPRLITTWEKVPVGTNGGVTPVGLISSLLGGTSVG 234

Query: 188 LTFVLFGFFTATCTRDIALKQLLVIPISAIAGLCGSLIDSLLGATLQFSGFCSVRNKV 245
           + + +          +IA  Q  ++    +AGL GSLIDS LGA +Q+SG+     K+
Sbjct: 235 VAYFVTQLIFVP-DLEIAAPQWPIVIYGGMAGLLGSLIDSYLGAIMQYSGYDESTGKI 291

Xenopus tropicalis (taxid: 8364)

>sp|Q6P726|TMM19_RAT Transmembrane protein 19 OS=Rattus norvegicus GN=Tmem19 PE=2 SV=2

 Score =  153 bits (386), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 90/221 (40%), Positives = 130/221 (58%), Gaps = 2/221 (0%)

Query: 18  IAIRSYRRKSLNFSGAVSGFIVMTAHIAAGSRFGALLLVFFFTSSKLTKVGEERKRRVDA 77
           I+   +++KSL+ SGA+ G +V      A   F   LL+FF TSSKLTK   E K+R+D+
Sbjct: 79  ISCNGFKKKSLDHSGALGGLVVGFILTIANFSFFTSLLMFFLTSSKLTKWRGEMKKRLDS 138

Query: 78  DFKEGGQRNWIQVLSNSGIAAVLVVIVWKLTGQQDKCLDSKELPLVTSLIGGILGHYCCC 137
           ++KEGGQRNW+QV  N G+   L ++     G  +  +D  +    + +   +L      
Sbjct: 139 EYKEGGQRNWVQVFCNGGVPTELALLYMIENGPGEMPIDFAKQHTASWMCLSLLAALASS 198

Query: 138 NGDTWSSELG-VLSDEQPRLITTFKPVRRGTNGGVTKAGLLAAVAAGSVIGLTFVLFGFF 196
            GDTW+SE+  VLS   PRLITT++ V  GTNGGVT  GL++++  G+ +GL + L    
Sbjct: 199 AGDTWASEVAPVLSKSSPRLITTWEKVPVGTNGGVTAVGLVSSLLGGTFVGLAYFLTQLV 258

Query: 197 TATCTRDIALKQLLVIPISAIAGLCGSLIDSLLGATLQFSG 237
                 DI+  Q  +I    +AGL GS++DS LGAT+QFSG
Sbjct: 259 FVN-DLDISAPQWPLIAFGGLAGLLGSIVDSFLGATMQFSG 298

Rattus norvegicus (taxid: 10116)

>sp|Q91W52|TMM19_MOUSE Transmembrane protein 19 OS=Mus musculus GN=Tmem19 PE=2 SV=1

 Score =  150 bits (378), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 89/230 (38%), Positives = 132/230 (57%), Gaps = 2/230 (0%)

Query: 9   LIAVLISSLIAIRSYRRKSLNFSGAVSGFIVMTAHIAAGSRFGALLLVFFFTSSKLTKVG 68
           L +V++  +IA   +++KSL+ SGA+ G +V      A   F   L+ FF +SSKLTK  
Sbjct: 55  LFSVVVPVVIACNGFKKKSLDHSGALGGLVVGFILTIANFSFFTSLMTFFLSSSKLTKWR 114

Query: 69  EERKRRVDADFKEGGQRNWIQVLSNSGIAAVLVVIVWKLTGQQDKCLDSKELPLVTSLIG 128
              K+++D+++KEGGQRNW+QV  N  +   L ++     G  +  +D  +    + +  
Sbjct: 115 GNIKKQLDSEYKEGGQRNWVQVFCNGAVPTELALLYMIENGPGEMPIDFSKQHTASWMCL 174

Query: 129 GILGHYCCCNGDTWSSELG-VLSDEQPRLITTFKPVRRGTNGGVTKAGLLAAVAAGSVIG 187
            +L       GDTW+SE+  VLS   PRLITT++ V  GTNGGVT  GL +++  G+ +G
Sbjct: 175 SLLAALASSAGDTWASEVAPVLSKSSPRLITTWEKVPVGTNGGVTAVGLASSLLGGTFVG 234

Query: 188 LTFVLFGFFTATCTRDIALKQLLVIPISAIAGLCGSLIDSLLGATLQFSG 237
           L + L          DI+  Q  +I    +AGL GSL+DS LGAT+QFSG
Sbjct: 235 LAYFLTQLVFVN-DLDISAPQWPIIAFGGVAGLFGSLVDSFLGATMQFSG 283

Mus musculus (taxid: 10090)

>sp|Q6IR76|TMM19_XENLA Transmembrane protein 19 OS=Xenopus laevis GN=tmem19 PE=2 SV=1

 Score =  139 bits (351), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 95/241 (39%), Positives = 138/241 (57%), Gaps = 8/241 (3%)

Query: 9   LIAVLISSLIAIRSYRRKSLNFSGAVSGFIVMTAHIAAGSRFGALLLVFFFTSSKLTKVG 68
           L+++L   +I     +++SL+ SGA+ G +V      A   F + LL FFF SSKLTK  
Sbjct: 55  LVSLLTPIIIVSHGIKKRSLDSSGALGGLLVGFILTIANYSFFSALLAFFFISSKLTKWR 114

Query: 69  EERKRRVDADFKEGGQRNWIQVLSNSGIAAVLVVIVWKLTGQQDKCLDSKELPLVTSLIG 128
            E K+  D+++KEGGQRNW+QV  N G+ A L ++     G  +  +D  +    + +  
Sbjct: 115 GEVKKCYDSEYKEGGQRNWVQVFCNGGLPAELALLYMIENGPGEIPIDFSKEYTASWMCL 174

Query: 129 GILGHYCCCNGDTWSSELG-VLSDEQPRLITTFKPVRRGTNGGVTKAGLLAAVAAGSVIG 187
            +LG   C  GDTW+SE+G VLS   PRLITT++ V  GTNGGVT  GL++++  G  +G
Sbjct: 175 SLLGALSCSAGDTWASEIGPVLSKSAPRLITTWEKVPVGTNGGVTPIGLISSLLGGISVG 234

Query: 188 LTFVLFGFFTATCTRD---IALKQLLVIPISAIAGLCGSLIDSLLGATLQFSGFCSVRNK 244
           + +    F T     D   IA  Q  ++    +AGL GSLIDS LGA +Q+SG+     K
Sbjct: 235 VAY----FVTQLVFVDDLEIAAPQWPIVIYGGMAGLLGSLIDSYLGAIMQYSGYDESTGK 290

Query: 245 V 245
           +
Sbjct: 291 I 291

Xenopus laevis (taxid: 8355)

>sp|Q58343|Y933_METJA Uncharacterized membrane protein MJ0933 OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=MJ0933 PE=3 SV=1

 Score = 70.1 bits (170), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 75/248 (30%), Positives = 120/248 (48%), Gaps = 52/248 (20%)

Query: 1   METFLNQTLIAVLISSLIAIRSYRRKSLNFSG----AVSGFIVMTAHIAAGSRFGALLLV 56
           MET + +  +++LI  ++A+   + + L+  G    ++ GFI++      G ++  LLL 
Sbjct: 6   METLI-RLFVSILIICVLALMIKKSRCLDNEGVIGSSIMGFILLYF---CGFKYLILLLS 61

Query: 57  FFFTSSKLTKVGEERKRRVDADFKEGGQRNWIQVLSNSGIAAVLVVIV------WKLTGQ 110
           FF     +++VG E+K+    D      R+   VL+N G+  +L  I+      W L G 
Sbjct: 62  FFILGVLVSRVGLEKKKAKKMDET---CRSLKNVLAN-GLIPILFAILAIFGFNWALIGY 117

Query: 111 QDKCLDSKELPLVTSLIGGILGHYCCCNGDTWSSELGVLSDEQPRLITTFKPVRRGTNGG 170
                               +        DT+SSELG+LS+E+PRLITTF+ V +GT+G 
Sbjct: 118 --------------------ISSIAAATSDTFSSELGILSNEKPRLITTFEVVEKGTDGA 157

Query: 171 VTKAGLLAAVAAGSVIGL-TFVLFGFFTATCTRDIALKQLLVIPISAIAGLCGSLIDSLL 229
           +T  G LA V    +IGL  ++LFG        DI      ++      G+ G+L DSL+
Sbjct: 158 ITIFGTLAGVLGAFLIGLFGYLLFG--------DIK-----IVLCGTAGGIAGNLADSLV 204

Query: 230 GATLQFSG 237
           GA  +  G
Sbjct: 205 GALFERKG 212

Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) (taxid: 243232)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	248
225445360	287	PREDICTED: transmembrane protein 19 [Vit	0.987	0.853	0.771	1e-106
18420075	288	uncharacterized protein [Arabidopsis tha	0.987	0.850	0.764	6e-99
449464278	287	PREDICTED: transmembrane protein 19-like	0.987	0.853	0.755	9e-99
21537262	288	unknown [Arabidopsis thaliana]	0.987	0.850	0.760	4e-98
297812181	288	integral membrane family protein [Arabid	0.955	0.822	0.759	3e-97
255549012	271	conserved hypothetical protein [Ricinus	0.987	0.904	0.730	6e-95
224142113	287	predicted protein [Populus trichocarpa]	0.987	0.853	0.759	7e-95
147838988	586	hypothetical protein VITISV_030347 [Viti	0.794	0.336	0.775	5e-89
414590521	294	TPA: hypothetical protein ZEAMMB73_89727	0.963	0.812	0.652	1e-85
326503230	289	predicted protein [Hordeum vulgare subsp	0.923	0.792	0.698	7e-85

>gi|225445360|ref|XP_002284876.1| PREDICTED: transmembrane protein 19 [Vitis vinifera] gi|297738884|emb|CBI28129.3| unnamed protein product [Vitis vinifera]

 Score =  390 bits (1001), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 189/245 (77%), Positives = 211/245 (86%)

Query: 1   METFLNQTLIAVLISSLIAIRSYRRKSLNFSGAVSGFIVMTAHIAAGSRFGALLLVFFFT 60
           ME F  Q +IA+L S+ IAIRS+RRKSL+ SGA +GF V+T H   G R+GA+LL FF T
Sbjct: 1   MENFPIQPIIAILFSAAIAIRSFRRKSLDLSGAFAGFAVLTIHFGVGYRYGAMLLAFFLT 60

Query: 61  SSKLTKVGEERKRRVDADFKEGGQRNWIQVLSNSGIAAVLVVIVWKLTGQQDKCLDSKEL 120
           SSKLTK GEE+KR VDADFKEGGQRNW QVL NSGI+AVL +I+W+LTG QDKCLDSKE 
Sbjct: 61  SSKLTKFGEEKKRLVDADFKEGGQRNWKQVLFNSGISAVLALILWRLTGWQDKCLDSKES 120

Query: 121 PLVTSLIGGILGHYCCCNGDTWSSELGVLSDEQPRLITTFKPVRRGTNGGVTKAGLLAAV 180
            L+TSLIGGI+GHY CCNGDTWSSELG+LSD QPRLITTFKPVR+GTNGGVTK GLLAA 
Sbjct: 121 SLITSLIGGIIGHYSCCNGDTWSSELGILSDSQPRLITTFKPVRKGTNGGVTKTGLLAAT 180

Query: 181 AAGSVIGLTFVLFGFFTATCTRDIALKQLLVIPISAIAGLCGSLIDSLLGATLQFSGFCS 240
           AAG VIGLTFVL GFFT  C  D+ALKQLLVIP+SA+AGLCGSLIDSLLGATLQ+SGFCS
Sbjct: 181 AAGGVIGLTFVLIGFFTTKCASDVALKQLLVIPLSAVAGLCGSLIDSLLGATLQYSGFCS 240

Query: 241 VRNKV 245
           VRNKV
Sbjct: 241 VRNKV 245

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18420075|ref|NP_568386.1| uncharacterized protein [Arabidopsis thaliana] gi|334187781|ref|NP_001190343.1| uncharacterized protein [Arabidopsis thaliana] gi|110738248|dbj|BAF01053.1| hypothetical protein [Arabidopsis thaliana] gi|332005384|gb|AED92767.1| uncharacterized protein [Arabidopsis thaliana] gi|332005385|gb|AED92768.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  366 bits (939), Expect = 6e-99,   Method: Compositional matrix adjust.
 Identities = 188/246 (76%), Positives = 218/246 (88%), Gaps = 1/246 (0%)

Query: 1   METFLNQTLI-AVLISSLIAIRSYRRKSLNFSGAVSGFIVMTAHIAAGSRFGALLLVFFF 59
           MET     LI AV+ISSLIA RSY+RKSL+ SG ++GF+VMT H  AG R+GALLLVFF 
Sbjct: 1   METSPQFRLIFAVIISSLIAFRSYKRKSLDLSGGIAGFLVMTIHFTAGFRYGALLLVFFL 60

Query: 60  TSSKLTKVGEERKRRVDADFKEGGQRNWIQVLSNSGIAAVLVVIVWKLTGQQDKCLDSKE 119
           TSSKLTKVGE++KRRVD +FKEGGQRNW+QVL NSGIA+VLVVI   LTG +DKCLDSK+
Sbjct: 61  TSSKLTKVGEDKKRRVDVEFKEGGQRNWVQVLCNSGIASVLVVIACTLTGWKDKCLDSKQ 120

Query: 120 LPLVTSLIGGILGHYCCCNGDTWSSELGVLSDEQPRLITTFKPVRRGTNGGVTKAGLLAA 179
             +VT+LIGGI+GHY CCNGDTWSSELGVLSD QPRLITTFKPV++GTNGGVTKAGLLAA
Sbjct: 121 SEIVTALIGGIIGHYACCNGDTWSSELGVLSDAQPRLITTFKPVKKGTNGGVTKAGLLAA 180

Query: 180 VAAGSVIGLTFVLFGFFTATCTRDIALKQLLVIPISAIAGLCGSLIDSLLGATLQFSGFC 239
           +AAG+ +GLTF++FG FTA+C  D+ALKQLLVIP+SA+AGLCGSLIDS+LGAT+QFSGFC
Sbjct: 181 LAAGTTVGLTFLIFGLFTASCASDVALKQLLVIPLSALAGLCGSLIDSILGATIQFSGFC 240

Query: 240 SVRNKV 245
           SVRNKV
Sbjct: 241 SVRNKV 246

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449464278|ref|XP_004149856.1| PREDICTED: transmembrane protein 19-like [Cucumis sativus] gi|449508273|ref|XP_004163269.1| PREDICTED: transmembrane protein 19-like [Cucumis sativus]

 Score =  365 bits (937), Expect = 9e-99,   Method: Compositional matrix adjust.
 Identities = 185/245 (75%), Positives = 211/245 (86%)

Query: 1   METFLNQTLIAVLISSLIAIRSYRRKSLNFSGAVSGFIVMTAHIAAGSRFGALLLVFFFT 60
           M+  L Q  +AV+I+S+IA R+YRRKSLN SGA++GFIVM+ H A   R+GA+LLVFFFT
Sbjct: 1   MDNILIQPSVAVIIASIIAFRAYRRKSLNLSGALAGFIVMSTHFAINYRYGAVLLVFFFT 60

Query: 61  SSKLTKVGEERKRRVDADFKEGGQRNWIQVLSNSGIAAVLVVIVWKLTGQQDKCLDSKEL 120
           SSKLTKVGEE+KR VDADFKEGGQRNWIQV+ NSGIA VL VI+WK+TG QDKCLDSK+ 
Sbjct: 61  SSKLTKVGEEKKRVVDADFKEGGQRNWIQVVFNSGIATVLAVIIWKITGGQDKCLDSKDS 120

Query: 121 PLVTSLIGGILGHYCCCNGDTWSSELGVLSDEQPRLITTFKPVRRGTNGGVTKAGLLAAV 180
            LVT+LIGGILGHY CCNGDTWSSELG+LSD  PRLIT FKPVR+GTNG VT AGLLAA 
Sbjct: 121 ALVTALIGGILGHYSCCNGDTWSSELGILSDATPRLITNFKPVRKGTNGAVTNAGLLAAT 180

Query: 181 AAGSVIGLTFVLFGFFTATCTRDIALKQLLVIPISAIAGLCGSLIDSLLGATLQFSGFCS 240
           AAG+VIGLTFVL GFFT  C     LKQLLVIP++A+AGLCGS+IDSLLGAT+QFSGFC+
Sbjct: 181 AAGAVIGLTFVLLGFFTTKCDYGTTLKQLLVIPLAAVAGLCGSVIDSLLGATVQFSGFCT 240

Query: 241 VRNKV 245
           VRNKV
Sbjct: 241 VRNKV 245

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|21537262|gb|AAM61603.1| unknown [Arabidopsis thaliana]

 Score =  363 bits (931), Expect = 4e-98,   Method: Compositional matrix adjust.
 Identities = 187/246 (76%), Positives = 217/246 (88%), Gaps = 1/246 (0%)

Query: 1   METFLNQTLI-AVLISSLIAIRSYRRKSLNFSGAVSGFIVMTAHIAAGSRFGALLLVFFF 59
           MET     LI AV+ISSLIA RSY+RKSL+ SG ++GF+VMT H  AG R+GALLLVFF 
Sbjct: 1   METSPQFRLIFAVIISSLIAFRSYKRKSLDLSGGIAGFLVMTIHFTAGFRYGALLLVFFL 60

Query: 60  TSSKLTKVGEERKRRVDADFKEGGQRNWIQVLSNSGIAAVLVVIVWKLTGQQDKCLDSKE 119
           TSSKLTKVGE++KRRVD +FKEGGQRNW+QVL NSGIA+VLVVI   LTG +DKCLDSK+
Sbjct: 61  TSSKLTKVGEDKKRRVDVEFKEGGQRNWVQVLCNSGIASVLVVIACTLTGWKDKCLDSKQ 120

Query: 120 LPLVTSLIGGILGHYCCCNGDTWSSELGVLSDEQPRLITTFKPVRRGTNGGVTKAGLLAA 179
             +VT+LIGGI+GHY CCNGDTWSSELGVLSD QPRLITTFKPV++GTNGGVTKAGLLAA
Sbjct: 121 SEIVTALIGGIIGHYACCNGDTWSSELGVLSDAQPRLITTFKPVKKGTNGGVTKAGLLAA 180

Query: 180 VAAGSVIGLTFVLFGFFTATCTRDIALKQLLVIPISAIAGLCGSLIDSLLGATLQFSGFC 239
           +AAG+ +GLTF++FG FTA+C  D+ALKQLLVIP+ A+AGLCGSLIDS+LGAT+QFSGFC
Sbjct: 181 LAAGTTVGLTFLIFGLFTASCASDVALKQLLVIPLFALAGLCGSLIDSILGATIQFSGFC 240

Query: 240 SVRNKV 245
           SVRNKV
Sbjct: 241 SVRNKV 246

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297812181|ref|XP_002873974.1| integral membrane family protein [Arabidopsis lyrata subsp. lyrata] gi|297319811|gb|EFH50233.1| integral membrane family protein [Arabidopsis lyrata subsp. lyrata]

 Score =  360 bits (924), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 180/237 (75%), Positives = 211/237 (89%)

Query: 9   LIAVLISSLIAIRSYRRKSLNFSGAVSGFIVMTAHIAAGSRFGALLLVFFFTSSKLTKVG 68
           ++A +ISSLIA RSY+RKSL+ SG ++GF+VMT H  AG R+GALLLVFF TSSKLTKVG
Sbjct: 10  IVAAVISSLIAFRSYKRKSLDLSGGIAGFLVMTIHFTAGFRYGALLLVFFLTSSKLTKVG 69

Query: 69  EERKRRVDADFKEGGQRNWIQVLSNSGIAAVLVVIVWKLTGQQDKCLDSKELPLVTSLIG 128
           E++KRRVD +FKEGGQRNW+QVL N GIA+VLVVI   LTG QDKCLDSK+   VT+LIG
Sbjct: 70  EDKKRRVDVEFKEGGQRNWVQVLCNGGIASVLVVIACTLTGWQDKCLDSKQSETVTALIG 129

Query: 129 GILGHYCCCNGDTWSSELGVLSDEQPRLITTFKPVRRGTNGGVTKAGLLAAVAAGSVIGL 188
           GI+GHY CCNGDTWSSELGVLSD QPRLITT KPV++GTNGGVT AGLLAA+AAG+ +G+
Sbjct: 130 GIIGHYACCNGDTWSSELGVLSDAQPRLITTLKPVKKGTNGGVTNAGLLAALAAGTTVGV 189

Query: 189 TFVLFGFFTATCTRDIALKQLLVIPISAIAGLCGSLIDSLLGATLQFSGFCSVRNKV 245
           TF++FGFFTA+C  D+ALKQLLVIP+SA+AGLCGSLIDS+LGAT+QFSGFCSVRNKV
Sbjct: 190 TFLIFGFFTASCASDVALKQLLVIPVSALAGLCGSLIDSVLGATIQFSGFCSVRNKV 246

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255549012|ref|XP_002515562.1| conserved hypothetical protein [Ricinus communis] gi|223545506|gb|EEF47011.1| conserved hypothetical protein [Ricinus communis]

 Score =  352 bits (904), Expect = 6e-95,   Method: Compositional matrix adjust.
 Identities = 179/245 (73%), Positives = 207/245 (84%)

Query: 1   METFLNQTLIAVLISSLIAIRSYRRKSLNFSGAVSGFIVMTAHIAAGSRFGALLLVFFFT 60
           ME  + Q LI  LISS IAIR+Y+RKSLN SGA++GF+VMT H A   RFGA++L FF +
Sbjct: 1   MEGNIIQPLIGALISSTIAIRAYKRKSLNLSGAIAGFLVMTIHFAVSYRFGAIILAFFLS 60

Query: 61  SSKLTKVGEERKRRVDADFKEGGQRNWIQVLSNSGIAAVLVVIVWKLTGQQDKCLDSKEL 120
           SSKLTKVGEE+KRR+DADFKEGGQRNWIQVL NSGIA VL + +WKL G Q+ CLD+KE 
Sbjct: 61  SSKLTKVGEEKKRRIDADFKEGGQRNWIQVLFNSGIATVLALAIWKLRGWQEVCLDTKES 120

Query: 121 PLVTSLIGGILGHYCCCNGDTWSSELGVLSDEQPRLITTFKPVRRGTNGGVTKAGLLAAV 180
            ++T+L+GGI+GHY CC+GDTWSSELGVLSD  PRLITTFK VRRGTNGGVT AGL AA 
Sbjct: 121 TVLTALLGGIIGHYSCCSGDTWSSELGVLSDATPRLITTFKHVRRGTNGGVTIAGLAAAA 180

Query: 181 AAGSVIGLTFVLFGFFTATCTRDIALKQLLVIPISAIAGLCGSLIDSLLGATLQFSGFCS 240
           AAG VIG+TFVLFG FT +C   +ALKQLLVIP+S +AG+CGSLIDSLLGATLQFSGFC+
Sbjct: 181 AAGGVIGVTFVLFGLFTTSCEYSVALKQLLVIPLSVMAGVCGSLIDSLLGATLQFSGFCT 240

Query: 241 VRNKV 245
           VRNKV
Sbjct: 241 VRNKV 245

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224142113|ref|XP_002324403.1| predicted protein [Populus trichocarpa] gi|222865837|gb|EEF02968.1| predicted protein [Populus trichocarpa]

 Score =  352 bits (903), Expect = 7e-95,   Method: Compositional matrix adjust.
 Identities = 186/245 (75%), Positives = 212/245 (86%)

Query: 1   METFLNQTLIAVLISSLIAIRSYRRKSLNFSGAVSGFIVMTAHIAAGSRFGALLLVFFFT 60
           ME  + Q  +AVLIS +IAI++YRRKSL+ +GAV+GFIVMT H A   RFGA+LLVFFF+
Sbjct: 1   MENVVIQPSVAVLISFVIAIKAYRRKSLDVTGAVAGFIVMTLHFAISYRFGAILLVFFFS 60

Query: 61  SSKLTKVGEERKRRVDADFKEGGQRNWIQVLSNSGIAAVLVVIVWKLTGQQDKCLDSKEL 120
           SSKLTKVGE++KRR DA+FKEGGQRNWIQVL+NSGIA+VLV+ V +L G +DKCLD KE 
Sbjct: 61  SSKLTKVGEDKKRRFDAEFKEGGQRNWIQVLANSGIASVLVLAVGRLAGWEDKCLDGKES 120

Query: 121 PLVTSLIGGILGHYCCCNGDTWSSELGVLSDEQPRLITTFKPVRRGTNGGVTKAGLLAAV 180
            ++TSLIGGI+G Y CCNGDTWSSELGVLSD QPRLITTFKPVRRG NGGVT AGLLAA 
Sbjct: 121 AVITSLIGGIIGQYSCCNGDTWSSELGVLSDAQPRLITTFKPVRRGANGGVTLAGLLAAA 180

Query: 181 AAGSVIGLTFVLFGFFTATCTRDIALKQLLVIPISAIAGLCGSLIDSLLGATLQFSGFCS 240
           AAG VIGL FVL GFFT  C  D+ALKQLLVIP++A+AGLCGSLIDSLLGATLQFSGFC+
Sbjct: 181 AAGGVIGLAFVLIGFFTTKCVFDVALKQLLVIPVAALAGLCGSLIDSLLGATLQFSGFCT 240

Query: 241 VRNKV 245
           VRNKV
Sbjct: 241 VRNKV 245

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147838988|emb|CAN77066.1| hypothetical protein VITISV_030347 [Vitis vinifera]

 Score =  333 bits (853), Expect = 5e-89,   Method: Compositional matrix adjust.
 Identities = 162/209 (77%), Positives = 177/209 (84%), Gaps = 12/209 (5%)

Query: 49  RFGALLLVFFFTSSKLTKVGEERKRRVDADFKEGGQRNWIQVLSNSGIAAVLVVIVWKLT 108
           R+GA+LL FF TSSKLTK GEE+KR VDADFKEGGQRNW QVL NSGI+AVL +I+W+LT
Sbjct: 336 RYGAMLLAFFLTSSKLTKFGEEKKRLVDADFKEGGQRNWKQVLFNSGISAVLALILWRLT 395

Query: 109 GQQDKCLDSKELPLVTSLIGGILGHYCCCNGDTWSSELGVLSDEQPRLITTFK------- 161
           G QDKCLDSKE  L+TSLIGGI+GHY CCNGDTWSSELG+LSD QPRLITTFK       
Sbjct: 396 GWQDKCLDSKESSLITSLIGGIIGHYSCCNGDTWSSELGILSDSQPRLITTFKILNPDVF 455

Query: 162 -----PVRRGTNGGVTKAGLLAAVAAGSVIGLTFVLFGFFTATCTRDIALKQLLVIPISA 216
                PVR+GTNGGVTK GLLAA AAG VIGLTFVL GFFT  C  D+ALKQLLVIP+SA
Sbjct: 456 PHGYXPVRKGTNGGVTKTGLLAATAAGGVIGLTFVLIGFFTTKCASDVALKQLLVIPLSA 515

Query: 217 IAGLCGSLIDSLLGATLQFSGFCSVRNKV 245
           +AGLCGSLIDSLLGATLQ+SGFCSVRNKV
Sbjct: 516 VAGLCGSLIDSLLGATLQYSGFCSVRNKV 544

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|414590521|tpg|DAA41092.1| TPA: hypothetical protein ZEAMMB73_897279 [Zea mays]

 Score =  322 bits (824), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 156/239 (65%), Positives = 198/239 (82%)

Query: 7   QTLIAVLISSLIAIRSYRRKSLNFSGAVSGFIVMTAHIAAGSRFGALLLVFFFTSSKLTK 66
           ++ +   ++++IA+R+ RR+SL+ SG V+GF+VM  HI+ G R+GALLL FFF+SSK+TK
Sbjct: 14  RSAVGAALAAVIAVRAVRRRSLDASGGVAGFVVMAVHISCGYRYGALLLAFFFSSSKVTK 73

Query: 67  VGEERKRRVDADFKEGGQRNWIQVLSNSGIAAVLVVIVWKLTGQQDKCLDSKELPLVTSL 126
           +GE+ KRR++ +FKEGGQRNWIQVL+NS IA VLVVI   +TG QD+C+DS    L+T +
Sbjct: 74  IGEDHKRRIEENFKEGGQRNWIQVLANSTIATVLVVIFALMTGGQDQCMDSNGSKLITGI 133

Query: 127 IGGILGHYCCCNGDTWSSELGVLSDEQPRLITTFKPVRRGTNGGVTKAGLLAAVAAGSVI 186
           IGGI+GHYCCCNGDTWSSE+GVLS+EQPRLIT+ KPVR+GTNG VT  GLLAA   G +I
Sbjct: 134 IGGIIGHYCCCNGDTWSSEIGVLSNEQPRLITSLKPVRKGTNGAVTLQGLLAATGGGLII 193

Query: 187 GLTFVLFGFFTATCTRDIALKQLLVIPISAIAGLCGSLIDSLLGATLQFSGFCSVRNKV 245
           GLTFV+ G  TA C+ D+A++QLLV+PISA AGL GSLIDSLLGATL+FSG+CSVR KV
Sbjct: 194 GLTFVVVGLLTAECSSDMAIRQLLVLPISAAAGLLGSLIDSLLGATLEFSGYCSVRKKV 252

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|326503230|dbj|BAJ99240.1| predicted protein [Hordeum vulgare subsp. vulgare]

 Score =  319 bits (817), Expect = 7e-85,   Method: Compositional matrix adjust.
 Identities = 160/229 (69%), Positives = 188/229 (82%)

Query: 17  LIAIRSYRRKSLNFSGAVSGFIVMTAHIAAGSRFGALLLVFFFTSSKLTKVGEERKRRVD 76
           LIA  + RR+SL+ SG  +GF VM  H+A G R+GALLL FFFTSSK+TK+GE+RKRRV+
Sbjct: 19  LIASGAVRRRSLDASGGAAGFAVMALHLACGYRYGALLLAFFFTSSKVTKIGEDRKRRVE 78

Query: 77  ADFKEGGQRNWIQVLSNSGIAAVLVVIVWKLTGQQDKCLDSKELPLVTSLIGGILGHYCC 136
            DFKEGGQRNWIQVL+NS IA VLV+++  +TG QD+CLDS    ++T +IG I+GHYCC
Sbjct: 79  EDFKEGGQRNWIQVLANSAIATVLVIVLAIMTGGQDQCLDSNGSKVITGIIGAIIGHYCC 138

Query: 137 CNGDTWSSELGVLSDEQPRLITTFKPVRRGTNGGVTKAGLLAAVAAGSVIGLTFVLFGFF 196
           CNGDTWSSE+GVLSDEQPRL+TT KPVR+GTNGGVT  GLLAA A G  IGLTFV  G  
Sbjct: 139 CNGDTWSSEIGVLSDEQPRLVTTLKPVRKGTNGGVTLQGLLAATAGGLTIGLTFVAVGLM 198

Query: 197 TATCTRDIALKQLLVIPISAIAGLCGSLIDSLLGATLQFSGFCSVRNKV 245
           TA C+ D++L+QLLVIPISA AGL GSLIDS LGATLQFSG+CSVR KV
Sbjct: 199 TADCSFDMSLQQLLVIPISAAAGLLGSLIDSFLGATLQFSGYCSVRKKV 247

Source: Hordeum vulgare subsp. vulgare

Species: Hordeum vulgare

Genus: Hordeum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	248
TAIR|locus:2147705	288	AT5G19930 [Arabidopsis thalian	0.907	0.781	0.706	8e-85
DICTYBASE|DDB_G0287439	295	DDB_G0287439 "Transmembrane pr	0.895	0.752	0.381	1.2e-33
ZFIN|ZDB-GENE-040625-78	322	tmem19 "transmembrane protein	0.899	0.692	0.378	1.2e-33
UNIPROTKB|E1C1Q4	336	TMEM19 "Uncharacterized protei	0.875	0.645	0.374	1.5e-33
FB|FBgn0036353	334	CG10171 [Drosophila melanogast	0.830	0.616	0.422	4.1e-33
UNIPROTKB|F1PGI2	297	TMEM19 "Uncharacterized protei	0.862	0.720	0.370	1.1e-30
RGD|735209	351	Tmem19 "transmembrane protein	0.862	0.609	0.370	1.8e-30
UNIPROTKB|F1SH34	336	TMEM19 "Uncharacterized protei	0.846	0.625	0.377	3e-30
UNIPROTKB|A7E3R1	336	TMEM19 "Uncharacterized protei	0.862	0.636	0.365	1.3e-29
UNIPROTKB|Q96HH6	336	TMEM19 "Transmembrane protein	0.858	0.633	0.362	1.3e-29

TAIR|locus:2147705 AT5G19930 [Arabidopsis thaliana (taxid:3702)]

 Score = 849 (303.9 bits), Expect = 8.0e-85, P = 8.0e-85
 Identities = 159/225 (70%), Positives = 185/225 (82%)

Query:    21 RSYRRKSLNFSGAVSGFIVMTAHIAAGSRFGALLLVFFFTSSKLTKVGEERKRRVDADFK 80
             RSY+RKSL+ SG ++GF+VMT H  AG R+GALLLVFF TSSKLTKVGE++KRRVD +FK
Sbjct:    22 RSYKRKSLDLSGGIAGFLVMTIHFTAGFRYGALLLVFFLTSSKLTKVGEDKKRRVDVEFK 81

Query:    81 EGGQRNWIQVLSNSGIAAVLVVIVWKLTGQQDKCLDSKELPLVTSLIGGILGHYCCCNGD 140
             EGGQRNW+QVL NSGIA+VLVVI   LTG +DKCLDSK+  +VT+LIGGI+GHY CCNGD
Sbjct:    82 EGGQRNWVQVLCNSGIASVLVVIACTLTGWKDKCLDSKQSEIVTALIGGIIGHYACCNGD 141

Query:   141 TWSSELGVLSDEQPRLITTFKPVRRGTNXXXXXXXXXXXXXXXXXXXXTFVLFGFFTATC 200
             TWSSELGVLSD QPRLITTFKPV++GTN                    TF++FG FTA+C
Sbjct:   142 TWSSELGVLSDAQPRLITTFKPVKKGTNGGVTKAGLLAALAAGTTVGLTFLIFGLFTASC 201

Query:   201 TRDIALKQLLVIPISAIAGLCGSLIDSLLGATLQFSGFCSVRNKV 245
               D+ALKQLLVIP+SA+AGLCGSLIDS+LGAT+QFSGFCSVRNKV
Sbjct:   202 ASDVALKQLLVIPLSALAGLCGSLIDSILGATIQFSGFCSVRNKV 246

GO:0016021 "integral to membrane" evidence=IEA

DICTYBASE|DDB_G0287439 DDB_G0287439 "Transmembrane protein 19" [Dictyostelium discoideum (taxid:44689)]

 Score = 366 (133.9 bits), Expect = 1.2e-33, P = 1.2e-33
 Identities = 85/223 (38%), Positives = 121/223 (54%)

Query:    23 YRRKSLNFSGAVSGFIVMTAHIAAGSRFGALLLVFFFTSSKLTKVGEERKRRVDADFKEG 82
             YR+KSLN SG ++ ++   +    GS F  LLL F+F+SS LTK     K+ ++     G
Sbjct:    25 YRKKSLNQSGTITAWLTGVSTCIFGSTFATLLLSFYFSSSYLTKYKSSIKKTIEDGHTAG 84

Query:    83 GQRNWIQVLSNSGIAAVLVVIVWKLTGQQDKCLDSKELPLVTSLIGGILGHYCCCNGDTW 142
             GQRN+IQVLSNS    +   I +  +   +  ++       + +I   +GHY CCNGDTW
Sbjct:    85 GQRNYIQVLSNSLPGTIFAAIFYFFSKSSNTLINFNNDFFSSFIICCFIGHYSCCNGDTW 144

Query:   143 SSELGVLSDEQPRLITTFKPVRRGTNXXXXXXXXXXXXXXXXXXXXTFVLFGFFTATCTR 202
             +SELG+LS  +P LITTFK V +GTN                     F +  +F      
Sbjct:   145 ASELGILSKGEPILITTFKKVPKGTNGGLSPLGIGASIAGGFFIGLMFYISSYFFNLPFY 204

Query:   203 DIALKQLLVIPISAIAGLCGSLIDSLLGATLQFSGFCSVRNKV 245
                 + + ++ +S I+GL GSLIDSL+G+TLQ S F S+  KV
Sbjct:   205 HQQQQIISILLLSTISGLLGSLIDSLMGSTLQLSLF-SIDRKV 246

GO:0016021 "integral to membrane" evidence=IEA

GO:0044351 "macropinocytosis" evidence=RCA

ZFIN|ZDB-GENE-040625-78 tmem19 "transmembrane protein 19" [Danio rerio (taxid:7955)]

 Score = 366 (133.9 bits), Expect = 1.2e-33, P = 1.2e-33
 Identities = 87/230 (37%), Positives = 127/230 (55%)

Query:    21 RSYRRKSLNFSGAVSGFIVMTAHIAAGSRFGALLLVFFFTSSKLTKVGEERKRRVDADFK 80
             R+ +RKSL+  GA+   +V      A   F A+LL FF TS+KLT+   E K+++D ++K
Sbjct:    53 RASKRKSLDHGGAIGAMLVGFVLTMANMSFFAVLLTFFITSTKLTRWKGEIKKKIDPEYK 112

Query:    81 EGGQRNWIQVLSNSGIAAVLVVIVWKLTGQQDKCLDSKELPLVTSLIGGILGHYCCCNGD 140
             EGGQRNW+QV  N G+   L ++     G  +  +D  +    + +   +LG   C  GD
Sbjct:   113 EGGQRNWLQVFCNGGVPTELALLYMIEAGPGEMAIDFAKQYSASWMCLSLLGALACSTGD 172

Query:   141 TWSSELG-VLSDEQPRLITTFKPVRRGTNXXXXXXXXXXXXXXXXXXXXTFVLFGFFTAT 199
             TW+SE+G VLS  +P+LITT++ V  GTN                      V + F    
Sbjct:   173 TWASEVGPVLSKSKPKLITTWRDVPTGTNGGVTSVGLLASVLGGGAAG---VAYFFMQIL 229

Query:   200 CTRDI--ALKQLLVIPISAIAGLCGSLIDSLLGATLQFSGFC-SVRNKVN 246
               +D+  A+ Q  +I   AIAGL GSL+DSLLGAT+Q+SG+  S+R  V+
Sbjct:   230 LVKDLHSAVSQWPLILYGAIAGLLGSLLDSLLGATMQYSGYDESIRKVVS 279

GO:0016021 "integral to membrane" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0003674 "molecular_function" evidence=ND

UNIPROTKB|E1C1Q4 TMEM19 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 365 (133.5 bits), Expect = 1.5e-33, P = 1.5e-33
 Identities = 82/219 (37%), Positives = 123/219 (56%)

Query:    21 RSYRRKSLNFSGAVSGFIVMTAHIAAGSRFGALLLVFFFTSSKLTKVGEERKRRVDADFK 80
             + ++++SL+ SGA++G +V      A   F   LLVFF TSSKLTK  ++ K+R+D+++K
Sbjct:    67 QGFKKRSLDHSGALAGLVVGFILTVANYSFFTSLLVFFVTSSKLTKWKKDIKKRIDSEYK 126

Query:    81 EGGQRNWIQVLSNSGIAAVLVVIVWKLTGQQDKCLDSKELPLVTSLIGGILGHYCCCNGD 140
             EGGQRNW+QV  N GI   L ++    +G  +  +D  +    + +   +LG   C  GD
Sbjct:   127 EGGQRNWLQVFCNGGIPTELAILYMIESGPGEIPIDFTKYYTASWMCLSLLGALACSAGD 186

Query:   141 TWSSELG-VLSDEQPRLITTFKPVRRGTNXXXXXXXXXXXXXXXXXXXXTFVLFGFFTAT 199
             TW+SE+G V+S  +PRLITT+K V  GTN                     + +      +
Sbjct:   187 TWASEIGSVMSKSKPRLITTWKQVPVGTNGGVTLVGLLSSFLGGMAVGIAYYITQLVFVS 246

Query:   200 CTRDIALKQLLVIPISAIAGLCGSLIDSLLGATLQFSGF 238
                D++  Q  +I   A AGL GS++DS LGAT+Q+SGF
Sbjct:   247 -DLDVSAPQWPIIVFGAAAGLLGSILDSYLGATMQYSGF 284

GO:0016021 "integral to membrane" evidence=IEA

FB|FBgn0036353 CG10171 [Drosophila melanogaster (taxid:7227)]

 Score = 361 (132.1 bits), Expect = 4.1e-33, P = 4.1e-33
 Identities = 95/225 (42%), Positives = 124/225 (55%)

Query:    24 RRKSLNFSGAVSGFIVMTAHIAAGSRFGALLLVFFFTSSKLTKVGEERKRRVDADFKEG- 82
             RR+S+N SGA  G +V      A   F A L+VFFF+SS+ TK     KRR ++DF+EG 
Sbjct:    66 RRRSVNRSGAALGILVAFILSIASHPFFASLVVFFFSSSRATKFRAHMKRRFESDFREGE 125

Query:    83 GQRNWIQVLSNSGIAAVLVVIVWKLTGQQDKCLD-SKELPLVTSLIG-GILGHYCCCNGD 140
             GQRNWIQVL N G+AA L ++     G  ++ +D ++E    +S +G  ++  + CCNGD
Sbjct:   126 GQRNWIQVLCNGGMAAQLALLYLLDCGSGERAVDFAREYR--SSWLGVAVMSAFACCNGD 183

Query:   141 TWSSELG-VLSDEQPRLITTFKPVRRGTNXXXXXXXXXXXXXXXXXXXXTFVLFGFFTAT 199
             TWSSELG VLS   P  I T++ V RGTN                      V FG+F  T
Sbjct:   184 TWSSELGSVLSQRDPVSIITWRRVPRGTNGGVSLLGVAVSLLGGL-----LVGFGYFV-T 237

Query:   200 CTRDIALKQLLVIP-------ISAIAGLCGSLIDSLLGATLQFSG 237
                 +  K LL+ P          IAGL GSL+DS+LG  LQFSG
Sbjct:   238 VRYTVEAKMLLISPPQWPIIAFGGIAGLFGSLLDSVLGGLLQFSG 282

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|F1PGI2 TMEM19 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 338 (124.0 bits), Expect = 1.1e-30, P = 1.1e-30
 Identities = 80/216 (37%), Positives = 115/216 (53%)

Query:    23 YRRKSLNFSGAVSGFIVMTAHIAAGSRFGALLLVFFFTSSKLTKVGEERKRRVDADFKEG 82
             +++KSL+ SGA+ G +V      A   F   LL+FF +SSKLTK   E K+R+D+++KEG
Sbjct:    30 FKKKSLDHSGALGGLVVGFILTIANFSFFTSLLMFFLSSSKLTKWKGEIKKRLDSEYKEG 89

Query:    83 GQRNWIQVLSNSGIAAVLVVIVWKLTGQQDKCLDSKELPLVTSLIGGILGHYCCCNGDTW 142
             GQRNW+QV  N  +   L ++     G  +  +D  +    + +   +L    C  GDTW
Sbjct:    90 GQRNWVQVFCNGAVPTELALLYMIENGPGEIPIDFSKQYTASWMCLSLLAALACSAGDTW 149

Query:   143 SSELG-VLSDEQPRLITTFKPVRRGTNXXXXXXXXXXXXXXXXXXXXTFVLFGFFTATCT 201
             +SE+G VLS   PRLITT++ V  GTN                    T+ L         
Sbjct:   150 ASEVGPVLSKSPPRLITTWEKVPVGTNGGVTVVGLVSSLLGGTFVGITYFLTQLVFVN-D 208

Query:   202 RDIALKQLLVIPISAIAGLCGSLIDSLLGATLQFSG 237
              DI+  Q  +I    +AGL GS++DS LGAT+QF+G
Sbjct:   209 LDISAPQWPIIAFGGLAGLLGSVVDSYLGATMQFTG 244

GO:0016021 "integral to membrane" evidence=IEA

RGD|735209 Tmem19 "transmembrane protein 19" [Rattus norvegicus (taxid:10116)]

 Score = 336 (123.3 bits), Expect = 1.8e-30, P = 1.8e-30
 Identities = 80/216 (37%), Positives = 113/216 (52%)

Query:    23 YRRKSLNFSGAVSGFIVMTAHIAAGSRFGALLLVFFFTSSKLTKVGEERKRRVDADFKEG 82
             +++KSL+ SGA+ G +V      A   F   LL+FF TSSKLTK   E K+R+D+++KEG
Sbjct:    84 FKKKSLDHSGALGGLVVGFILTIANFSFFTSLLMFFLTSSKLTKWRGEMKKRLDSEYKEG 143

Query:    83 GQRNWIQVLSNSGIAAVLVVIVWKLTGQQDKCLDSKELPLVTSLIGGILGHYCCCNGDTW 142
             GQRNW+QV  N G+   L ++     G  +  +D  +    + +   +L       GDTW
Sbjct:   144 GQRNWVQVFCNGGVPTELALLYMIENGPGEMPIDFAKQHTASWMCLSLLAALASSAGDTW 203

Query:   143 SSELG-VLSDEQPRLITTFKPVRRGTNXXXXXXXXXXXXXXXXXXXXTFVLFGFFTATCT 201
             +SE+  VLS   PRLITT++ V  GTN                     + L         
Sbjct:   204 ASEVAPVLSKSSPRLITTWEKVPVGTNGGVTAVGLVSSLLGGTFVGLAYFLTQLVFVN-D 262

Query:   202 RDIALKQLLVIPISAIAGLCGSLIDSLLGATLQFSG 237
              DI+  Q  +I    +AGL GS++DS LGAT+QFSG
Sbjct:   263 LDISAPQWPLIAFGGLAGLLGSIVDSFLGATMQFSG 298

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|F1SH34 TMEM19 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 334 (122.6 bits), Expect = 3.0e-30, P = 3.0e-30
 Identities = 83/220 (37%), Positives = 117/220 (53%)

Query:    23 YRRKSLNFSGAVSGFIVMTAHIAAGSRFGALLLVFFFTSSKLTKVGEERKRRVDADFKEG 82
             +++KSL+ SGA+ G +V      A   F   LL+FF +SSKLTK   E K+R+D+++KEG
Sbjct:    69 FKKKSLDHSGAIGGLVVGFILTIANFSFFTSLLMFFLSSSKLTKWKGEAKKRLDSEYKEG 128

Query:    83 GQRNWIQVLSNSGIAAVLVVIVWKLTGQQDKCLDSKELPLVTSLIGGILGHYCCCNGDTW 142
             GQRNWIQV  N  +   L ++     G  +  +D  +    + +   +L       GDTW
Sbjct:   129 GQRNWIQVFCNGAVPTELALLYMIENGPGEIPIDFSKQHTASWMCLSLLAALASSAGDTW 188

Query:   143 SSELG-VLSDEQPRLITTFKPVRRGTNXXXXXXXXXXXXXXXXXXXXTFVLFGFFTATCT 201
             +SE+G VLS   PRLITT++ V  GTN                    TFV   +F +   
Sbjct:   189 ASEVGTVLSKSPPRLITTWEKVPVGTNGGVTMVGLAFSLLGG-----TFVGIAYFLSQLV 243

Query:   202 ----RDIALKQLLVIPISAIAGLCGSLIDSLLGATLQFSG 237
                  DI+  Q  +I    +AGL GS++DS LGAT+QFSG
Sbjct:   244 FVNDLDISAPQWPIIAFGGLAGLLGSIVDSYLGATMQFSG 283

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|A7E3R1 TMEM19 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 328 (120.5 bits), Expect = 1.3e-29, P = 1.3e-29
 Identities = 79/216 (36%), Positives = 112/216 (51%)

Query:    23 YRRKSLNFSGAVSGFIVMTAHIAAGSRFGALLLVFFFTSSKLTKVGEERKRRVDADFKEG 82
             +++KSL+ SGA+ G +V      A   F   L+ FF +SSKLTK   E K+ +D+++KEG
Sbjct:    69 FKKKSLDHSGALGGLVVGFILTIANFSFFTSLVTFFLSSSKLTKWKGEAKKHLDSEYKEG 128

Query:    83 GQRNWIQVLSNSGIAAVLVVIVWKLTGQQDKCLDSKELPLVTSLIGGILGHYCCCNGDTW 142
             GQRNWIQV  N  +   L ++    +G  +  +D       + +   +L       GDTW
Sbjct:   129 GQRNWIQVFCNGAVPTELALLYMIESGPGEIPIDFSRQHTASWMCLSLLAALASSAGDTW 188

Query:   143 SSELG-VLSDEQPRLITTFKPVRRGTNXXXXXXXXXXXXXXXXXXXXTFVLFGFFTATCT 201
             +SE+G VLS   PRLITT++ V  GTN                    T+ L         
Sbjct:   189 ASEVGPVLSKSTPRLITTWEKVPVGTNGGVTVVGLASSLLGGTFVGITYFLTQLVFVN-D 247

Query:   202 RDIALKQLLVIPISAIAGLCGSLIDSLLGATLQFSG 237
              DI+  Q  +I    +AGL GS++DS LGAT+QFSG
Sbjct:   248 LDISAPQWPIIAFGGLAGLLGSIVDSYLGATMQFSG 283

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|Q96HH6 TMEM19 "Transmembrane protein 19" [Homo sapiens (taxid:9606)]

 Score = 328 (120.5 bits), Expect = 1.3e-29, P = 1.3e-29
 Identities = 78/215 (36%), Positives = 113/215 (52%)

Query:    24 RRKSLNFSGAVSGFIVMTAHIAAGSRFGALLLVFFFTSSKLTKVGEERKRRVDADFKEGG 83
             ++KSL+ SGA+ G +V      A   F   LL+FF +SSKLTK   E K+R+D+++KEGG
Sbjct:    70 KKKSLDHSGALGGLVVGFILTIANFSFFTSLLMFFLSSSKLTKWKGEVKKRLDSEYKEGG 129

Query:    84 QRNWIQVLSNSGIAAVLVVIVWKLTGQQDKCLDSKELPLVTSLIGGILGHYCCCNGDTWS 143
             QRNW+QV  N  +   L ++     G  +  +D  +    + +   +L    C  GDTW+
Sbjct:   130 QRNWVQVFCNGAVPTELALLYMIENGPGEIPVDFSKQYSASWMCLSLLAALACSAGDTWA 189

Query:   144 SELG-VLSDEQPRLITTFKPVRRGTNXXXXXXXXXXXXXXXXXXXXTFVLFGFFTATCTR 202
             SE+G VLS   PRLITT++ V  GTN                     + L          
Sbjct:   190 SEVGPVLSKSSPRLITTWEKVPVGTNGGVTVVGLVSSLLGGTFVGIAYFLTQLIFVN-DL 248

Query:   203 DIALKQLLVIPISAIAGLCGSLIDSLLGATLQFSG 237
             DI+  Q  +I    +AGL GS++DS LGAT+Q++G
Sbjct:   249 DISAPQWPIIAFGGLAGLLGSIVDSYLGATMQYTG 283

GO:0016021 "integral to membrane" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00016810001 SubName- Full=Chromosome chr11 scaffold_13, whole genome shotgun sequence; (287 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	248
pfam01940	224	pfam01940, DUF92, Integral membrane protein DUF92	1e-67
COG1836	247	COG1836, COG1836, Predicted membrane protein [Func	9e-37
TIGR00297	237	TIGR00297, TIGR00297, TIGR00297 family protein	9e-29

>gnl|CDD|216799 pfam01940, DUF92, Integral membrane protein DUF92

 Score =  207 bits (530), Expect = 1e-67
 Identities = 87/229 (37%), Positives = 120/229 (52%), Gaps = 24/229 (10%)

Query: 11  AVLISSLIAIRSYRRKSLNFSGAVSGFIVMTAHIA-AGSRFGALLLVFFFTSSKLTKVGE 69
           AVL++ L+   +YR KSL  SGA++  ++ T      G R+ ALLLVFF   S  TK+G 
Sbjct: 1   AVLLNLLLGALAYRLKSLTLSGALAAVLLGTLIWGLGGWRWFALLLVFFVLGSLATKLGY 60

Query: 70  ERKRRVDADFKEGGQRNWIQVLSNSGIAAVLVVIVWKLTGQQDKCLDSKELPLVTSLIGG 129
           +RK  +      GG+R    VL N G+AA+L ++                       + G
Sbjct: 61  KRKAALGIAEARGGRRGPENVLGNGGVAAILALLYALGPTGASL------------FLAG 108

Query: 130 ILGHYCCCNGDTWSSELGVLSDEQPRLITTFKPVRRGTNGGVTKAGLLAAVAAGSVIGLT 189
            +G +     DTW+SE+G LS   PRLITT KPV  GT+GGV+  G LA++    +I L 
Sbjct: 109 FVGSFAAALADTWASEIGKLSGRTPRLITTLKPVPPGTSGGVSLLGTLASLLGSLLIALV 168

Query: 190 FVLFGFFTATCTRDIALKQLLVIPISAIAGLCGSLIDSLLGATLQFSGF 238
             L G         I+   +LV+    +AG  GSL+DSLLGATLQ  G+
Sbjct: 169 AWLLGL--------ISPPGVLVV---TLAGFLGSLVDSLLGATLQRKGW 206

Members of this family have several predicted transmembrane helices. The function of these prokaryotic proteins is unknown. Length = 224

>gnl|CDD|224749 COG1836, COG1836, Predicted membrane protein [Function unknown]

 Score =  129 bits (327), Expect = 9e-37
 Identities = 77/249 (30%), Positives = 113/249 (45%), Gaps = 25/249 (10%)

Query: 1   METFLNQTLIAVLISSLIAIRSYRRKSLNFSGAVSGFIVMTAHIAAGS-RFGALLLVFFF 59
            +  ++  L+A+L+   +   +Y+ K+L+ SG++S  ++    I  G  ++  LLL+FF 
Sbjct: 6   TQMAIDPLLLALLLILFLGALAYKAKALDLSGSLSAILLGALIIVFGGFKWFLLLLIFFA 65

Query: 60  TSSKLTKVGEERKRRVDADFKEGGQRNWIQVLSNSGIAAVLVVIVWKLTGQQDKCLDSKE 119
             S  TK   E K  +       G R+   VL N   A +  V+       Q        
Sbjct: 66  LGSLATKYKYEEKEALGVAEGRDGARSLENVLGNGLAALLFAVLYAIYPDPQLW------ 119

Query: 120 LPLVTSLIGGILGHYCCCNGDTWSSELGVLSDEQPRLITTFKPVRRGTNGGVTKAGLLAA 179
                  +GG        N DT +SE+G    ++PRLITTFK V  GT+G V+  G LAA
Sbjct: 120 ------FLGGFAASVATANADTLASEIGKAYGKRPRLITTFKRVEPGTSGAVSLVGELAA 173

Query: 180 VAAGSVIGLTFVLFGFFTATCTRDIALKQLLVIPISAIAGLCGSLIDSLLGATLQFSGFC 239
           VA   +I L   L G              L  +    +AG  G+ IDSLLGATL+  G+ 
Sbjct: 174 VAGAFIIALLSYLVG-----------YISLGGVLSVTLAGFAGTNIDSLLGATLERKGYL 222

Query: 240 SVRNKVNVL 248
           +    VN L
Sbjct: 223 T-NEGVNFL 230

Length = 247

>gnl|CDD|213522 TIGR00297, TIGR00297, TIGR00297 family protein

 Score =  108 bits (271), Expect = 9e-29
 Identities = 67/229 (29%), Positives = 99/229 (43%), Gaps = 24/229 (10%)

Query: 11  AVLISSLIAIRSYRRKSLNFSGAVSGFIVMTAHI-AAGSRFGALLLVFFFTSSKLTKVGE 69
           AV++   +   +     L+  G    +I+    I  AG R   ++L FFF  S +T+ G+
Sbjct: 7   AVILCVFLLALAAYAPLLDPWGYGHAWIMGVIIILFAGFRGLLVILAFFFLGSAVTRYGQ 66

Query: 70  ERKRRVDADFKEGGQRNWIQVLSNSGIAAVLVVIVWKLTGQQDKCLDSKELPLVTSLIGG 129
           E K+      K  GQR    V  N G+   L  +      + D             L  G
Sbjct: 67  EEKKAAGIAEKRSGQRGPKNVWGN-GLTPALFALAIAFGPEWD-----------LWLALG 114

Query: 130 ILGHYCCCNGDTWSSELGVLSDEQPRLITTFKPVRRGTNGGVTKAGLLAAVAAGSVIGLT 189
            +        DT +SE+G    + PRLITT + V  GT+G ++  G LA  A    I L 
Sbjct: 115 YVASVATALSDTMASEIGKAYGKNPRLITTLQRVEPGTDGAISVEGTLAGFAGALAIALL 174

Query: 190 FVLFGFFTATCTRDIALKQLLVIPISAIAGLCGSLIDSLLGATLQFSGF 238
             L G         I+ K +L   ++A A   G+ +DSLLGATL+  G+
Sbjct: 175 GYLLGL--------ISFKGILFSTLAAFA---GTNLDSLLGATLERKGY 212

[Hypothetical proteins, Conserved]. Length = 237

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	248
KOG4491	323	consensus Predicted membrane protein [Function unk	100.0
TIGR00297	237	conserved hypothetical protein TIGR00297.	100.0
PF01940	226	DUF92: Integral membrane protein DUF92; InterPro:	100.0
COG1836	247	Predicted membrane protein [Function unknown]	100.0
PF01148	259	CTP_transf_1: Cytidylyltransferase family; InterPr	94.69

>KOG4491 consensus Predicted membrane protein [Function unknown]

Probab=100.00  E-value=8.4e-72  Score=491.94  Aligned_cols=243  Identities=45%  Similarity=0.703  Sum_probs=236.2

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHhcCCChhhhHHHHHHHHHHHhhChhHHHHHHHHHHhhhhhhhcchhhhhhcccccccC-
Q 025805            4 FLNQTLIAVLISSLIAIRSYRRKSLNFSGAVSGFIVMTAHIAAGSRFGALLLVFFFTSSKLTKVGEERKRRVDADFKEG-   82 (248)
Q Consensus         4 ~~~~~~~al~~~~~l~~~a~r~~sLt~sGalaa~~vG~l~~~~g~~~~~~Ll~FF~~sS~~Tk~k~~~K~~~~~~~~~~-   82 (248)
                      .|+||+++++++.+++..++||||||.||++++++||+++..++-+||..|++||++||++||+|++.|+++|.+++|+ 
T Consensus        38 pp~RwlFsvvvp~li~~~~lkrkSld~SGa~~G~lV~filtIa~h~ff~sl~~fF~sss~~tkfr~~~k~r~~s~~~eg~  117 (323)
T KOG4491|consen   38 PPWRWLFSVVVPVLIVSNGLKRKSLDHSGALGGLLVGFILTIANHSFFTSLLMFFLSSSKLTKFRGEVKKRLDSEYKEGL  117 (323)
T ss_pred             CcHHHHHHHHHHHHHHHHHHhhcccccccchhHHHHHHHHHHhcchhHHHHHHHHHccchhhhHHHHHHHHHHHHHhhcc
Confidence            5799999999999999999999999999999999999998888888999999999999999999999999999988887 


Q ss_pred             CCCChhHHhhcchHHHHHHHHHHHHhCCCCcccCcCchhHHHHHHHHHHHHHHhhhchhhhhhhh-ccCCCCceeeeCCc
Q 025805           83 GQRNWIQVLSNSGIAAVLVVIVWKLTGQQDKCLDSKELPLVTSLIGGILGHYCCCNGDTWSSELG-VLSDEQPRLITTFK  161 (248)
Q Consensus        83 g~R~~~QVlaNg~va~~~al~~~~~~~~~~~~~~~~~~~l~~~l~~~~~g~~A~~~aDTwASEiG-~ls~~~PrlItt~k  161 (248)
                      |||||.||+|||++|..++++|...+|+.+.+.|+.+++..+|++++.++|+|||++|||+||+| +||+++||+|||||
T Consensus       118 GQRNWvQVlCNggva~~Lally~~~~G~ge~~vDf~~~y~~swl~~~~~~a~ACcnGDTWsSElG~VLS~~~PrlItTw~  197 (323)
T KOG4491|consen  118 GQRNWVQVLCNGGVATELALLYMIENGPGEIPVDFSKQYSASWLCLSLLAALACCNGDTWSSELGPVLSKSSPRLITTWE  197 (323)
T ss_pred             CccchhhhhcCCcchHHHHHHHHHhcCCCccccchHHHHHHHHHHHHHHHHHHhcCCChhhhhhcchhccCCCceEEeee
Confidence            99999999999999999999999999999999999999999999999999999999999999999 99999999999999


Q ss_pred             ccCCCCCcccchhHHHHHHHHHHHHHHHHHHHhhhccccchhhhhhhHHHHHHHHHHHHHHHHHHHHhhhhhhceEEecC
Q 025805          162 PVRRGTNGGVTKAGLLAAVAAGSVIGLTFVLFGFFTATCTRDIALKQLLVIPISAIAGLCGSLIDSLLGATLQFSGFCSV  241 (248)
Q Consensus       162 ~Vp~GTnGgVS~lGt~As~~Ga~~Ig~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~G~~Gsl~DSlLGAtlQ~~~~~~~  241 (248)
                      |||+|||||||.+|.+++++|+.++|+.|++.++++.+|..+++.+||+.++++.++|++||++||+||||+|.+++|+.
T Consensus       198 ~Vp~GTNGGVt~~Gl~~sLlgGt~VG~~yf~t~l~tv~c~ldis~pQwpiIafgglAGL~GSlvDS~LGat~QfsG~~e~  277 (323)
T KOG4491|consen  198 KVPVGTNGGVTVVGLVSSLLGGTFVGIAYFLTQLITVNCDLDISAPQWPIIAFGGLAGLLGSLVDSYLGATMQFSGFNEV  277 (323)
T ss_pred             ecccCCCCCEeeHHHHHHHhccceeehHhhhhhhheeecccccCcccCcEeehhhHHHHHHHHHHHHhhhheeecccccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCeee
Q 025805          242 RNKVN  246 (248)
Q Consensus       242 ~~~v~  246 (248)
                      ++|||
T Consensus       278 ~gkvV  282 (323)
T KOG4491|consen  278 RGKVV  282 (323)
T ss_pred             cCeee
Confidence            99987

>TIGR00297 conserved hypothetical protein TIGR00297

Probab=100.00  E-value=6.4e-69  Score=477.42  Aligned_cols=218  Identities=30%  Similarity=0.350  Sum_probs=194.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCCChhhhHHHHHHHHHHH-hhChhHHHHHHHHHHhhhhhhhcchhhhhhcccccccCCC
Q 025805            6 NQTLIAVLISSLIAIRSYRRKSLNFSGAVSGFIVMTAHI-AAGSRFGALLLVFFFTSSKLTKVGEERKRRVDADFKEGGQ   84 (248)
Q Consensus         6 ~~~~~al~~~~~l~~~a~r~~sLt~sGalaa~~vG~l~~-~~g~~~~~~Ll~FF~~sS~~Tk~k~~~K~~~~~~~~~~g~   84 (248)
                      ++|.+++++++++++++||||+||+||+++|+++|++++ ..|++|+.+++.||++||++||||+++|+++|..|+|+|+
T Consensus         2 ~~~~~a~~~~~~l~~~~~~~~~L~~sG~~~a~~vG~~~~~~~g~~~~~~ll~Ff~~sS~~Tk~~~~~K~~~~~~e~~gg~   81 (237)
T TIGR00297         2 FLWLSAVILCVFLLALAAYAPLLDPWGYGHAWIMGVIIILFAGFRGLLVILAFFFLGSAVTRYGQEEKKAAGIAEKRSGQ   81 (237)
T ss_pred             hHHHHHHHHHHHHHHHHHHHccCCHhHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhHHHHhccHHHHHhcccccccCCC
Confidence            579999999999999999999999999999999999885 6899999999999999999999999999999999999999


Q ss_pred             CChhHHhhcchHHHHHHHHHHHHhCCCCcccCcCchhHHHHHHHHHHHHHHhhhchhhhhhhhccCCCCceeeeCCcccC
Q 025805           85 RNWIQVLSNSGIAAVLVVIVWKLTGQQDKCLDSKELPLVTSLIGGILGHYCCCNGDTWSSELGVLSDEQPRLITTFKPVR  164 (248)
Q Consensus        85 R~~~QVlaNg~va~~~al~~~~~~~~~~~~~~~~~~~l~~~l~~~~~g~~A~~~aDTwASEiG~ls~~~PrlItt~k~Vp  164 (248)
                      ||++||+||++++++++++|.+.+.         .++   ++..+|++++|||+|||||||||++|+++||+||||||||
T Consensus        82 R~~~qVlaNg~~~~~~al~~~~~~~---------~~~---~~~~~f~~s~A~a~aDT~ASEiG~ls~~~p~lItt~k~V~  149 (237)
T TIGR00297        82 RGPKNVWGNGLTPALFALAIAFGPE---------WDL---WLALGYVASVATALSDTMASEIGKAYGKNPRLITTLQRVE  149 (237)
T ss_pred             CCHHHHHHhhHHHHHHHHHHHhccc---------chH---HHHHHHHHHHHHHHcchHHHhhhhccCCCCeEeecCccCC
Confidence            9999999999999999998765221         112   2346899999999999999999999999999999999999


Q ss_pred             CCCCcccchhHHHHHHHHHHHHHHHHHHHhhhccccchhhhhhhHHHHHHHHHHHHHHHHHHHHhhhhhhceEEecCCCe
Q 025805          165 RGTNGGVTKAGLLAAVAAGSVIGLTFVLFGFFTATCTRDIALKQLLVIPISAIAGLCGSLIDSLLGATLQFSGFCSVRNK  244 (248)
Q Consensus       165 ~GTnGgVS~lGt~As~~Ga~~Ig~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~G~~Gsl~DSlLGAtlQ~~~~~~~~~~  244 (248)
                      ||||||||++||+|+++|+++|+..+++.+..           ++..+.+++++|++||++||+||||+|+|++.+ |+.
T Consensus       150 ~GT~GgVS~~Gt~As~~Ga~~I~~~~~~~~~~-----------~~~~~~~~~~aG~~Gsl~DSlLGAtlQ~~g~l~-N~~  217 (237)
T TIGR00297       150 PGTDGAISVEGTLAGFAGALAIALLGYLLGLI-----------SFKGILFSTLAAFAGTNLDSLLGATLERKGYLT-NEH  217 (237)
T ss_pred             CCCCCcccHHHHHHHHHHHHHHHHHHHHHhhc-----------chHHHHHHHHHHHHHHHHHHHHhHHHhhccccc-cHH
Confidence            99999999999999999999999876554421           122345677999999999999999999999776 888


Q ss_pred             eee
Q 025805          245 VNV  247 (248)
Q Consensus       245 v~~  247 (248)
                      ||.
T Consensus       218 VN~  220 (237)
T TIGR00297       218 VNL  220 (237)
T ss_pred             HHH
Confidence            875

>PF01940 DUF92: Integral membrane protein DUF92; InterPro: IPR002794 Many members of this family have no known function and are predicted to be integral membrane proteins

Probab=100.00  E-value=1.9e-68  Score=472.51  Aligned_cols=214  Identities=45%  Similarity=0.688  Sum_probs=189.0

Q ss_pred             HHHHHHHHHHHHHHhcCCChhhhHHHHHHHHHH-HhhChhHHHHHHHHHHhhhhhhhcchhhhhhcccccccCCCCChhH
Q 025805           11 AVLISSLIAIRSYRRKSLNFSGAVSGFIVMTAH-IAAGSRFGALLLVFFFTSSKLTKVGEERKRRVDADFKEGGQRNWIQ   89 (248)
Q Consensus        11 al~~~~~l~~~a~r~~sLt~sGalaa~~vG~l~-~~~g~~~~~~Ll~FF~~sS~~Tk~k~~~K~~~~~~~~~~g~R~~~Q   89 (248)
                      +++++.++++++||||+||+||+++|+++|+++ ...||+|+++|+.||++||++||+|+++|+++|++|+|+|+|||+|
T Consensus         1 Al~~~~~l~~~a~~~k~Lt~sGa~aa~~vG~~~~~~~g~~~~~~L~~FF~~ss~~Tk~~~~~K~~~~~~~~~~g~R~~~Q   80 (226)
T PF01940_consen    1 ALLLSLLLAILAYKKKSLTLSGALAAFLVGTLIYGFGGWPWFLLLLAFFISSSLATKYKKERKEKLGEAEKKGGRRDWWQ   80 (226)
T ss_pred             CcHHHHHHHHHHHHHCCCCHhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHhCChHHHHHhcccccCCCCCChHH
Confidence            467889999999999999999999999999965 5689999999999999999999999999999999999999999999


Q ss_pred             HhhcchHHHHHHHHHHHHhCCCCcccCcCchhHHHHHHHHHHHHHHhhhchhhhhhhhccCCCCceeeeCCcccCCCCCc
Q 025805           90 VLSNSGIAAVLVVIVWKLTGQQDKCLDSKELPLVTSLIGGILGHYCCCNGDTWSSELGVLSDEQPRLITTFKPVRRGTNG  169 (248)
Q Consensus        90 VlaNg~va~~~al~~~~~~~~~~~~~~~~~~~l~~~l~~~~~g~~A~~~aDTwASEiG~ls~~~PrlItt~k~Vp~GTnG  169 (248)
                      |+||+++|++++++|++.+..        .++.   +..++++++|||+|||||||||++||++||+|||||||||||||
T Consensus        81 VlaNg~~a~~~al~~~~~~~~--------~~~~---~~~~~~~s~A~a~aDTwASEiG~ls~~~P~lItt~k~V~~Gt~G  149 (226)
T PF01940_consen   81 VLANGGVAALCALLYAFFPST--------PAPL---LLLAFLGSIAAANADTWASEIGVLSKGPPRLITTFKRVPPGTSG  149 (226)
T ss_pred             hhhccHHHHHHHHHHHHhccc--------chHH---HHHHHHHHHHHHhhhHHHHhhhhhcCCCCeEeeCCcCCCCCCCC
Confidence            999999999999998875411        1122   34589999999999999999999999999999999999999999


Q ss_pred             ccchhHHHHHHHHHHHHHHHHHHHhhhccccchhhhhhhHHHHHHHHHHHHHHHHHHHHhhhhhhc-eEEecCCCeeee
Q 025805          170 GVTKAGLLAAVAAGSVIGLTFVLFGFFTATCTRDIALKQLLVIPISAIAGLCGSLIDSLLGATLQF-SGFCSVRNKVNV  247 (248)
Q Consensus       170 gVS~lGt~As~~Ga~~Ig~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~G~~Gsl~DSlLGAtlQ~-~~~~~~~~~v~~  247 (248)
                      |||++||+|+++|+++|++++++....        +.+   .+.+++++|++||++||+||||+|+ +.+.+ |+.||.
T Consensus       150 gVS~lGt~as~~Ga~~Ia~~~~~~~~~--------~~~---~~~~~~~~G~~Gsl~DSlLGAtlQ~G~~~l~-N~~VN~  216 (226)
T PF01940_consen  150 GVSLLGTLASLAGALLIALVAFLLGLI--------SFP---LVLLIALAGFLGSLLDSLLGATLQRGRGWLN-NDAVNF  216 (226)
T ss_pred             eechHHHHHHHHHHHHHHHHHHHHHcc--------chH---HHHHHHHHHHHHHHHHHHhhHHHhCCCCCcC-hhHHHH
Confidence            999999999999999999987665421        111   2334579999999999999999999 77775 888875

; GO: 0016021 integral to membrane

>COG1836 Predicted membrane protein [Function unknown]

Probab=100.00  E-value=7.8e-62  Score=428.70  Aligned_cols=222  Identities=34%  Similarity=0.471  Sum_probs=200.1

Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHhcCCChhhhHHHHHHHHHHH-hhChhHHHHHHHHHHhhhhhhhcchhhhhhcccccc
Q 025805            2 ETFLNQTLIAVLISSLIAIRSYRRKSLNFSGAVSGFIVMTAHI-AAGSRFGALLLVFFFTSSKLTKVGEERKRRVDADFK   80 (248)
Q Consensus         2 ~~~~~~~~~al~~~~~l~~~a~r~~sLt~sGalaa~~vG~l~~-~~g~~~~~~Ll~FF~~sS~~Tk~k~~~K~~~~~~~~   80 (248)
                      +.++++++.++++..++++.+||+|.||++|.++|+++|.++. .+|+.|+++|+.||++||.+||+|+++|++++.+|+
T Consensus         7 ~~~~~~~l~all~~~~L~~la~~~k~Ld~~G~~~A~~lG~~i~~~~g~~~fllll~Ff~~g~l~Tk~~~~~K~~~gvaE~   86 (247)
T COG1836           7 QMAIDPLLLALLLILFLGALAYKAKALDLSGSLSAILLGALIIVFGGFKWFLLLLIFFALGSLATKYKYEEKEALGVAEG   86 (247)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhccCChhhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccc
Confidence            4568899999999999999999999999999999999999874 689999999999999999999999999999999999


Q ss_pred             cCCCCChhHHhhcchHHHHHHHHHHHHhCCCCcccCcCchhHHHHHHHHHHHHHHhhhchhhhhhhhccCCCCceeeeCC
Q 025805           81 EGGQRNWIQVLSNSGIAAVLVVIVWKLTGQQDKCLDSKELPLVTSLIGGILGHYCCCNGDTWSSELGVLSDEQPRLITTF  160 (248)
Q Consensus        81 ~~g~R~~~QVlaNg~va~~~al~~~~~~~~~~~~~~~~~~~l~~~l~~~~~g~~A~~~aDTwASEiG~ls~~~PrlItt~  160 (248)
                      ++|+|+.+||+.|+..|.+|+++|.+++.          ++  .+...+|++++|+++|||||||||+.++++||+||||
T Consensus        87 ~~g~R~~~NV~gn~l~~~l~av~~~~~~~----------~~--~~~~~~~~~SvAta~aDT~ASEiG~~~~~~p~lITtf  154 (247)
T COG1836          87 RDGARSLENVLGNGLAALLFAVLYAIYPD----------PQ--LWFLGGFAASVATANADTLASEIGKAYGKRPRLITTF  154 (247)
T ss_pred             ccccccHHHHhhccHHHHHHHHHHHhCCC----------ch--HHHHHHHHHHHHHHhhhHHHHHHhHhhCCCeEEEEee
Confidence            99999999999999999999999865432          11  2234689999999999999999999999999999999


Q ss_pred             cccCCCCCcccchhHHHHHHHHHHHHHHHHHHHhhhccccchhhhhhhHHHHHHHHHHHHHHHHHHHHhhhhhhceEEec
Q 025805          161 KPVRRGTNGGVTKAGLLAAVAAGSVIGLTFVLFGFFTATCTRDIALKQLLVIPISAIAGLCGSLIDSLLGATLQFSGFCS  240 (248)
Q Consensus       161 k~Vp~GTnGgVS~lGt~As~~Ga~~Ig~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~G~~Gsl~DSlLGAtlQ~~~~~~  240 (248)
                      ||||||||||||+.||+|+++|+++|++.++++++..           ...+..++++||+|+++||++|||+|+|||.+
T Consensus       155 krV~~Gt~GaVS~~GelAav~Ga~iIal~~~l~~~~~-----------~~~v~~vtlaGf~G~~iDSllGAtle~kg~Lt  223 (247)
T COG1836         155 KRVEPGTSGAVSLVGELAAVAGAFIIALLSYLVGYIS-----------LGGVLSVTLAGFAGTNIDSLLGATLERKGYLT  223 (247)
T ss_pred             eEcCCCCCCccchhhhHHHHHHHHHHHHHHHHHHhcc-----------cchhHHHHHHHHHhhhHHHHhhHHHHhheeec
Confidence            9999999999999999999999999999877666531           12344678999999999999999999999997


Q ss_pred             CCCeeee
Q 025805          241 VRNKVNV  247 (248)
Q Consensus       241 ~~~~v~~  247 (248)
                       |+.||.
T Consensus       224 -N~~VNf  229 (247)
T COG1836         224 -NEGVNF  229 (247)
T ss_pred             -ccchhH
Confidence             888885

>PF01148 CTP_transf_1: Cytidylyltransferase family; InterPro: IPR000374 Phosphatidate cytidylyltransferase (2

Probab=94.69  E-value=0.23  Score=43.43  Aligned_cols=87  Identities=15%  Similarity=0.195  Sum_probs=54.2

Q ss_pred             HHHHHHhhhchhhhhhhhccCCCCceeeeCCcccCCCCCcccchhHHHHHHHHHHHHHHHHHHHhhhccccchhhhhhhH
Q 025805          130 ILGHYCCCNGDTWSSELGVLSDEQPRLITTFKPVRRGTNGGVTKAGLLAAVAAGSVIGLTFVLFGFFTATCTRDIALKQL  209 (248)
Q Consensus       130 ~~g~~A~~~aDTwASEiG~ls~~~PrlItt~k~Vp~GTnGgVS~lGt~As~~Ga~~Ig~~~~l~~~~~~~~~~~~~~~~~  209 (248)
                      ..+-...+.+|++|+=+|+..++++         .|-.|..=|++|++++++++++++.......  ... . .......
T Consensus       133 ~~~i~~~~~gD~~A~l~G~~fGk~~---------~~~~sp~KT~EGsi~~~i~~~i~~~~~~~~~--~~~-~-~~~~~~~  199 (259)
T PF01148_consen  133 LIGILILGIGDSFAYLVGRRFGKHL---------APKISPKKTWEGSIAGFISSFIISFLLLYYL--SSF-F-LSWWQAI  199 (259)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCc---------CCCCCCCCCHHHHhHHHHHHHHHHHHHHHHh--cch-h-hHHHHHH
Confidence            3456778899999999999988652         2223444499999999999999976432111  100 0 0011112


Q ss_pred             HHHHHHHHHHHHHHHHHHHh
Q 025805          210 LVIPISAIAGLCGSLIDSLL  229 (248)
Q Consensus       210 ~~~~i~~~~G~~Gsl~DSlL  229 (248)
                      ....+..+.+.+|.+++|.+
T Consensus       200 ~~~~~~~i~~~~gdl~~S~~  219 (259)
T PF01148_consen  200 LISLLASIVEAFGDLFESAI  219 (259)
T ss_pred             HHHHHHHHHHHHHHHHHHHH
Confidence            22234456677777777876

7.7.41 from EC) [, , ] (also known as CDP- diacylglycerol synthase) (CDS) is the enzyme that catalyzes the synthesis of CDP-diacylglycerol from CTP and phosphatidate (PA): CTP + phosphatidate = diphosphate + CDP-diacylglycerol CDP-diacylglycerol is an important branch point intermediate in both prokaryotic and eukaryotic organisms. CDS is a membrane-bound enzyme.; GO: 0016772 transferase activity, transferring phosphorus-containing groups, 0016020 membrane

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00