Citrus Sinensis ID: 025925
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 246 | ||||||
| 359491022 | 291 | PREDICTED: uncharacterized protein LOC10 | 0.943 | 0.797 | 0.875 | 1e-117 | |
| 297734310 | 307 | unnamed protein product [Vitis vinifera] | 0.943 | 0.755 | 0.875 | 1e-117 | |
| 357118017 | 293 | PREDICTED: uncharacterized protein LOC10 | 0.951 | 0.798 | 0.829 | 1e-113 | |
| 413933314 | 289 | putative domain of unknown function (DUF | 0.943 | 0.802 | 0.836 | 1e-112 | |
| 413933316 | 293 | putative domain of unknown function (DUF | 0.943 | 0.791 | 0.836 | 1e-111 | |
| 259490034 | 291 | uncharacterized protein LOC100304216 [Ze | 0.943 | 0.797 | 0.836 | 1e-111 | |
| 449439449 | 300 | PREDICTED: uncharacterized protein LOC10 | 0.943 | 0.773 | 0.844 | 1e-110 | |
| 115454871 | 291 | Os03g0708400 [Oryza sativa Japonica Grou | 0.951 | 0.804 | 0.833 | 1e-109 | |
| 326506410 | 291 | predicted protein [Hordeum vulgare subsp | 0.943 | 0.797 | 0.806 | 1e-109 | |
| 224133212 | 292 | predicted protein [Populus trichocarpa] | 0.943 | 0.794 | 0.879 | 1e-108 |
| >gi|359491022|ref|XP_003634205.1| PREDICTED: uncharacterized protein LOC100853969 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 426 bits (1094), Expect = e-117, Method: Compositional matrix adjust.
Identities = 203/232 (87%), Positives = 220/232 (94%)
Query: 1 MGTVIDSHFLALTAIVTVGYQLLFFVITALFKFDKVTDFAGSTNFIIIALLTLILKGSWH 60
MGTVIDSHFLALTAIVTVGYQ LFF+ITAL KFDKVTDFAGSTNF+I+A+LTL+LKG+WH
Sbjct: 1 MGTVIDSHFLALTAIVTVGYQFLFFIITALLKFDKVTDFAGSTNFVILAVLTLVLKGTWH 60
Query: 61 FRQVVLTFLAVVWGLRLALFLLMRILNWGEDRRFDEMRSNLGKLAIFWIFQAVWVWTVSL 120
FRQVVLT L V+WGLRL +FLLMRIL WGEDRRFDEMRSNLGKLA+FW FQAVWVWTVSL
Sbjct: 61 FRQVVLTLLVVIWGLRLGIFLLMRILQWGEDRRFDEMRSNLGKLAVFWTFQAVWVWTVSL 120
Query: 121 PVTVVNASDRDPSVQAVDVIGWIMWSVGVSIEAIADQQKLSFKNSPENRGKWCNVGFWKY 180
PVT+VNAS RDPS+QA D+IGWIMWSVG++IEA ADQQKLSFKNSPENRGKWCNVG WKY
Sbjct: 121 PVTIVNASGRDPSLQAADIIGWIMWSVGITIEASADQQKLSFKNSPENRGKWCNVGVWKY 180
Query: 181 SRHPNYFGEIFLWWGIFVASTPVLDGAEWLVILGPIFLTLLLLFISGIPLLE 232
+RHPNYFGEI LWWGIFVASTPVL+GAEWLVILGPIFLTLLLLF+SGIPLLE
Sbjct: 181 TRHPNYFGEILLWWGIFVASTPVLEGAEWLVILGPIFLTLLLLFVSGIPLLE 232
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297734310|emb|CBI15557.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|357118017|ref|XP_003560756.1| PREDICTED: uncharacterized protein LOC100830682 [Brachypodium distachyon] | Back alignment and taxonomy information |
|---|
| >gi|413933314|gb|AFW67865.1| putative domain of unknown function (DUF1295) containing family protein [Zea mays] | Back alignment and taxonomy information |
|---|
| >gi|413933316|gb|AFW67867.1| putative domain of unknown function (DUF1295) containing family protein [Zea mays] | Back alignment and taxonomy information |
|---|
| >gi|259490034|ref|NP_001159138.1| uncharacterized protein LOC100304216 [Zea mays] gi|223942193|gb|ACN25180.1| unknown [Zea mays] gi|413933315|gb|AFW67866.1| putative domain of unknown function (DUF1295) containing family protein [Zea mays] | Back alignment and taxonomy information |
|---|
| >gi|449439449|ref|XP_004137498.1| PREDICTED: uncharacterized protein LOC101219154 [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|115454871|ref|NP_001051036.1| Os03g0708400 [Oryza sativa Japonica Group] gi|13937298|gb|AAK50129.1|AC087797_14 unknown protein [Oryza sativa Japonica Group] gi|108710687|gb|ABF98482.1| expressed protein [Oryza sativa Japonica Group] gi|113549507|dbj|BAF12950.1| Os03g0708400 [Oryza sativa Japonica Group] gi|125545445|gb|EAY91584.1| hypothetical protein OsI_13219 [Oryza sativa Indica Group] gi|125587653|gb|EAZ28317.1| hypothetical protein OsJ_12291 [Oryza sativa Japonica Group] gi|215694680|dbj|BAG89871.1| unnamed protein product [Oryza sativa Japonica Group] | Back alignment and taxonomy information |
|---|
| >gi|326506410|dbj|BAJ86523.1| predicted protein [Hordeum vulgare subsp. vulgare] | Back alignment and taxonomy information |
|---|
| >gi|224133212|ref|XP_002321511.1| predicted protein [Populus trichocarpa] gi|222868507|gb|EEF05638.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 246 | ||||||
| TAIR|locus:2027774 | 302 | AT1G73650 [Arabidopsis thalian | 0.849 | 0.692 | 0.727 | 1.2e-83 | |
| TAIR|locus:2194090 | 305 | AT1G18180 [Arabidopsis thalian | 0.849 | 0.685 | 0.703 | 9.4e-82 | |
| UNIPROTKB|G4N6G0 | 335 | MGG_03731 "Uncharacterized pro | 0.825 | 0.605 | 0.440 | 4.4e-45 | |
| FB|FBgn0035914 | 316 | CG6282 [Drosophila melanogaste | 0.837 | 0.651 | 0.428 | 5.6e-45 | |
| ZFIN|ZDB-GENE-030131-3630 | 288 | si:ch211-210c8.6 "si:ch211-210 | 0.813 | 0.694 | 0.395 | 2.9e-39 | |
| UNIPROTKB|Q74AM9 | 256 | GSU2323 "Uncharacterized prote | 0.796 | 0.765 | 0.333 | 3.2e-26 | |
| TIGR_CMR|GSU_2323 | 256 | GSU_2323 "membrane protein, pu | 0.796 | 0.765 | 0.333 | 3.2e-26 | |
| DICTYBASE|DDB_G0279829 | 267 | DDB_G0279829 "DUF1295 family p | 0.760 | 0.700 | 0.312 | 3.4e-22 | |
| UNIPROTKB|Q722V9 | 257 | LMOf2365_0620 "Putative membra | 0.776 | 0.743 | 0.295 | 9e-22 | |
| UNIPROTKB|O53731 | 256 | Rv0446c "POSSIBLE CONSERVED TR | 0.739 | 0.710 | 0.288 | 4.6e-18 |
| TAIR|locus:2027774 AT1G73650 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 838 (300.0 bits), Expect = 1.2e-83, P = 1.2e-83
Identities = 152/209 (72%), Positives = 172/209 (82%)
Query: 1 MGTVIDSHFLALTAIVTVGYQLLFFVITALFKFDKVTDFAGSTNFIIIALLTLILKGSWH 60
MGTV+DSHFLALTAIVTV YQ +FFVITALFKFD+VTDFAGSTNF+I+A+LTL+LK SWH
Sbjct: 1 MGTVLDSHFLALTAIVTVIYQFIFFVITALFKFDQVTDFAGSTNFVILAVLTLVLKASWH 60
Query: 61 FRQVVLTFLAVVWGXXXXXXXXXXXXNWGEDRRFDEMRSNLGKLAIFWIFQAVWVWTVSL 120
FRQ+VLT L VVWG WGEDRRFDE R N+ +L IFW QAVWVWTVSL
Sbjct: 61 FRQIVLTLLVVVWGLRLGIFLLMRILQWGEDRRFDEQRGNIVRLIIFWTLQAVWVWTVSL 120
Query: 121 PVTVVNASDRDPSVQAVDVIGWIMWSVGVSIEAIADQQKLSFKNSPENRGKWCNVGFWKY 180
P+T+VNASD S++ DVIGW MW G IEA ADQQKLSFKNSPENRGKWC+VG WKY
Sbjct: 121 PLTLVNASDGGGSLKPADVIGWTMWVFGFLIEAAADQQKLSFKNSPENRGKWCDVGVWKY 180
Query: 181 SRHPNYFGEIFLWWGIFVASTPVLDGAEW 209
SRHPNYFGE+ LWWGIFVA++PVL+GAE+
Sbjct: 181 SRHPNYFGEMLLWWGIFVAASPVLEGAEY 209
|
|
| TAIR|locus:2194090 AT1G18180 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|G4N6G0 MGG_03731 "Uncharacterized protein" [Magnaporthe oryzae 70-15 (taxid:242507)] | Back alignment and assigned GO terms |
|---|
| FB|FBgn0035914 CG6282 [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
| ZFIN|ZDB-GENE-030131-3630 si:ch211-210c8.6 "si:ch211-210c8.6" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q74AM9 GSU2323 "Uncharacterized protein" [Geobacter sulfurreducens PCA (taxid:243231)] | Back alignment and assigned GO terms |
|---|
| TIGR_CMR|GSU_2323 GSU_2323 "membrane protein, putative" [Geobacter sulfurreducens PCA (taxid:243231)] | Back alignment and assigned GO terms |
|---|
| DICTYBASE|DDB_G0279829 DDB_G0279829 "DUF1295 family protein" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q722V9 LMOf2365_0620 "Putative membrane protein" [Listeria monocytogenes serotype 4b str. F2365 (taxid:265669)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|O53731 Rv0446c "POSSIBLE CONSERVED TRANSMEMBRANE PROTEIN" [Mycobacterium tuberculosis H37Rv (taxid:83332)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 246 | |||
| pfam06966 | 235 | pfam06966, DUF1295, Protein of unknown function (D | 3e-88 | |
| COG3752 | 272 | COG3752, COG3752, Steroid 5-alpha reductase family | 7e-37 |
| >gnl|CDD|219244 pfam06966, DUF1295, Protein of unknown function (DUF1295) | Back alignment and domain information |
|---|
Score = 260 bits (667), Expect = 3e-88
Identities = 103/215 (47%), Positives = 141/215 (65%), Gaps = 6/215 (2%)
Query: 24 FFVITALFKFDKVTDFAGSTNFIIIALLTLILKGSWHFRQVVLTFLAVVWGLRLALFLLM 83
F++I+ + D A F+I+A+LT +L R++++T L +WGLRL LL
Sbjct: 1 FWLISRRTGNYGLVDVAWGGGFVILAVLTALLSEGATLRRMLVTLLVTLWGLRLGWHLLR 60
Query: 84 RILNWGEDRRFDEMRSNLGK------LAIFWIFQAVWVWTVSLPVTVVNASDRDPSVQAV 137
R WGED R+ ++R N GK L IF+I QAV ++ VSLPV + NAS +P++ A
Sbjct: 61 RTWGWGEDYRYVDLRKNWGKWPYLLSLLIFFILQAVLLYIVSLPVYLANASGPNPALGAW 120
Query: 138 DVIGWIMWSVGVSIEAIADQQKLSFKNSPENRGKWCNVGFWKYSRHPNYFGEIFLWWGIF 197
D+IG +W VG+ EA+ADQQ +FK P N+GK C+ G W+YSRHPNYFGE +WWGIF
Sbjct: 121 DIIGIAIWLVGIGFEALADQQLWAFKGDPANKGKVCDTGLWRYSRHPNYFGEALIWWGIF 180
Query: 198 VASTPVLDGAEWLVILGPIFLTLLLLFISGIPLLE 232
+ + VL G EW I GP+ +TLLL+F+SGIPLLE
Sbjct: 181 LIAINVLSGLEWWTIAGPLLMTLLLVFVSGIPLLE 215
|
This family contains a number of bacterial and eukaryotic proteins of unknown function that are approximately 300 residues long. Length = 235 |
| >gnl|CDD|226275 COG3752, COG3752, Steroid 5-alpha reductase family enzyme [General function prediction only] | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 246 | |||
| PF06966 | 235 | DUF1295: Protein of unknown function (DUF1295); In | 100.0 | |
| COG3752 | 272 | Steroid 5-alpha reductase family enzyme [General f | 100.0 | |
| KOG4650 | 311 | consensus Predicted steroid reductase [General fun | 100.0 | |
| PF01222 | 432 | ERG4_ERG24: Ergosterol biosynthesis ERG4/ERG24 fam | 99.73 | |
| KOG1435 | 428 | consensus Sterol reductase/lamin B receptor [Lipid | 99.59 | |
| COG2020 | 187 | STE14 Putative protein-S-isoprenylcysteine methylt | 99.57 | |
| PF04191 | 106 | PEMT: Phospholipid methyltransferase ; InterPro: I | 99.49 | |
| KOG1638 | 257 | consensus Steroid reductase [Lipid transport and m | 99.43 | |
| PF04140 | 94 | ICMT: Isoprenylcysteine carboxyl methyltransferase | 99.37 | |
| PF02544 | 150 | Steroid_dh: 3-oxo-5-alpha-steroid 4-dehydrogenase | 99.21 | |
| PLN02392 | 260 | probable steroid reductase DET2 | 99.2 | |
| KOG2628 | 201 | consensus Farnesyl cysteine-carboxyl methyltransfe | 99.11 | |
| COG1755 | 172 | Uncharacterized protein conserved in bacteria [Fun | 99.1 | |
| PLN02560 | 308 | enoyl-CoA reductase | 99.09 | |
| PLN03164 | 323 | 3-oxo-5-alpha-steroid 4-dehydrogenase, C-terminal | 98.98 | |
| KOG1639 | 297 | consensus Steroid reductase required for elongatio | 97.77 | |
| KOG1640 | 304 | consensus Predicted steroid reductase [Lipid trans | 97.68 | |
| PF07298 | 191 | NnrU: NnrU protein; InterPro: IPR009915 This famil | 91.66 |
| >PF06966 DUF1295: Protein of unknown function (DUF1295); InterPro: IPR010721 This family contains a number of bacterial and eukaryotic proteins of unknown function that are approximately 300 residues long | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-60 Score=416.28 Aligned_cols=222 Identities=42% Similarity=0.893 Sum_probs=203.9
Q ss_pred HHHHHHhccCeEeecccccHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHhHHHHHhhhCcccchhHHHHHHhhh--
Q 025925 25 FVITALFKFDKVTDFAGSTNFIIIALLTLILKGSWHFRQVVLTFLAVVWGLRLALFLLMRILNWGEDRRFDEMRSNLG-- 102 (246)
Q Consensus 25 ~~~~~~~~~~~~~D~~w~~~~~~~a~~~~~~~~~~~~r~~l~~~l~~~W~~RL~~~l~~R~~~~~eD~Ry~~~r~~~~-- 102 (246)
|+++..+||++++|+.||++++++++.++..+++.+.|++++++++++||+||+.|+++|..+++||+||+++|++++
T Consensus 2 w~~s~~~~n~s~vD~~ws~~~~~~a~~~~~~~~~~~~r~~lv~~lv~~W~~RL~~~l~~R~~~~~eD~R~~~~r~~~~~~ 81 (235)
T PF06966_consen 2 WIISLATRNESIVDILWSFGFVLVAWVYALFSDGFSPRQLLVAALVIVWGLRLGYFLFRRNLGWGEDWRYDDLRKKWGEW 81 (235)
T ss_pred eeehHhhCCCCEEECcccHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHHhcCcc
Confidence 678999999999999999999999999988888889999999999999999999999999988899999999999863
Q ss_pred ----HHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCcccccccc
Q 025925 103 ----KLAIFWIFQAVWVWTVSLPVTVVNASDRDPSVQAVDVIGWIMWSVGVSIEAIADQQKLSFKNSPENRGKWCNVGFW 178 (246)
Q Consensus 103 ----~~~~~~~~Q~~~~~~~~lP~~~~~~~~~~~~l~~~~~~g~~l~~~g~~le~~ad~q~~~f~~~~~~~g~li~~Glw 178 (246)
+++.+|++|+++++++++|+++++..+++++++..|++|++++++|+++|++||.||.+||++|+|+||+|++|+|
T Consensus 82 ~~~~~~~~~~~~q~~~~~~~~lP~~~~~~~~~~~~~~~~~~~g~~l~~~g~~~E~~AD~Q~~~fk~~~~n~g~~~~~GLw 161 (235)
T PF06966_consen 82 FWPFSFFFIFLFQALLVWLISLPVYLANSSPPNPPLNWLDILGIALFLIGFLLETVADQQKYRFKKDPANKGKFCTTGLW 161 (235)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCcccCCccccCCee
Confidence 5678899999999999999999876555667899999999999999999999999999999999999999999999
Q ss_pred ccccCcchHHHHHHHHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhCchHHHHHh-ccC---cCcccccC
Q 025925 179 KYSRHPNYFGEIFLWWGIFVASTPVLDGAEWLVILGPIFLTLLLLFISGIPLLEVCL-SYY---THARAYIL 246 (246)
Q Consensus 179 ~~sRHPNYfge~l~w~g~~l~~~~~~~~~~~~~~i~p~~~~~ll~~~sgi~~~E~~~-~ky---~~Y~~Y~~ 246 (246)
+||||||||||+++|+|+++++.+...+..++++++|+++++++.++||+|..||++ +|| |+|+||+.
T Consensus 162 ~~sRHPNYfGE~l~W~g~~~~a~~~~~~~~~~~~~~pl~~~~~l~~~sgip~~E~~~~~kyg~~~~Y~~Y~~ 233 (235)
T PF06966_consen 162 RYSRHPNYFGEILFWWGIYLAAISSGSGWLWWAIIGPLFMTLLLLFVSGIPLLEKRMAKKYGDRPAYQEYQR 233 (235)
T ss_pred eeeeCchHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHhcCCCHhHHHHHh
Confidence 999999999999999999999987644445678899999999999999999999875 668 78999974
|
|
| >COG3752 Steroid 5-alpha reductase family enzyme [General function prediction only] | Back alignment and domain information |
|---|
| >KOG4650 consensus Predicted steroid reductase [General function prediction only] | Back alignment and domain information |
|---|
| >PF01222 ERG4_ERG24: Ergosterol biosynthesis ERG4/ERG24 family; InterPro: IPR001171 The two fungal enzymes, C-14 sterol reductase (gene ERG24 in budding yeast and erg3 in Neurospora crassa) and C-24(28) sterol reductase (gene ERG4 in budding yeast and sts1 in fission yeast), are involved in ergosterol biosynthesis | Back alignment and domain information |
|---|
| >KOG1435 consensus Sterol reductase/lamin B receptor [Lipid transport and metabolism; Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >COG2020 STE14 Putative protein-S-isoprenylcysteine methyltransferase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >PF04191 PEMT: Phospholipid methyltransferase ; InterPro: IPR007318 The Saccharomyces cerevisiae (Baker's yeast) phospholipid methyltransferase (2 | Back alignment and domain information |
|---|
| >KOG1638 consensus Steroid reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
| >PF04140 ICMT: Isoprenylcysteine carboxyl methyltransferase (ICMT) family ; InterPro: IPR007269 The isoprenylcysteine o-methyltransferase (2 | Back alignment and domain information |
|---|
| >PF02544 Steroid_dh: 3-oxo-5-alpha-steroid 4-dehydrogenase ; InterPro: IPR001104 Synonym(s): Steroid 5-alpha-reductase 3-oxo-5-alpha-steroid 4-dehydrogenases, 1 | Back alignment and domain information |
|---|
| >PLN02392 probable steroid reductase DET2 | Back alignment and domain information |
|---|
| >KOG2628 consensus Farnesyl cysteine-carboxyl methyltransferase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >COG1755 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
| >PLN02560 enoyl-CoA reductase | Back alignment and domain information |
|---|
| >PLN03164 3-oxo-5-alpha-steroid 4-dehydrogenase, C-terminal domain containing protein; Provisional | Back alignment and domain information |
|---|
| >KOG1639 consensus Steroid reductase required for elongation of the very long chain fatty acids [Lipid transport and metabolism] | Back alignment and domain information |
|---|
| >KOG1640 consensus Predicted steroid reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
| >PF07298 NnrU: NnrU protein; InterPro: IPR009915 This family consists of several plant and bacterial NnrU proteins | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
No hit with e-value below 0.005
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 246 | |||
| 4a2n_B | 194 | Isoprenylcysteine carboxyl methyltransferase; memb | 99.83 |
| >4a2n_B Isoprenylcysteine carboxyl methyltransferase; membrane protein, RAS and RHO gtpases signallin; HET: SAH PLM CDL; 3.40A {Methanosarcina acetivorans} | Back alignment and structure |
|---|
Probab=99.83 E-value=5.3e-20 Score=156.12 Aligned_cols=104 Identities=15% Similarity=0.230 Sum_probs=80.6
Q ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHh-cc--CCCCCCccccccccccccCcchHHHHHHHHHHHHhhcCCCCchhHH
Q 025925 134 VQAVDVIGWIMWSVGVSIEAIADQQKLSF-KN--SPENRGKWCNVGFWKYSRHPNYFGEIFLWWGIFVASTPVLDGAEWL 210 (246)
Q Consensus 134 l~~~~~~g~~l~~~g~~le~~ad~q~~~f-~~--~~~~~g~li~~Glw~~sRHPNYfge~l~w~g~~l~~~~~~~~~~~~ 210 (246)
..+..++|.+++++|+.++..||.|+.++ +. +++++++++++|+|++||||||+|+++.|+|+++...+ ++
T Consensus 74 p~~~~~~G~~l~l~G~~l~~~a~~~Lg~~f~~~~~~~~~~~Lvt~G~y~~vRHP~Y~G~~l~~~g~~l~~~s------~~ 147 (194)
T 4a2n_B 74 PDSIRLFALIVTFLNIGLFTKIHKDLGNNWSAILEIKDGHKLVKEGIYKNIRHPMYAHLWLWVITQGIILSN------WV 147 (194)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHGGGCCSSCCEETTCCCCCSSTTTTBSSHHHHHHHHHHHHHHHHHTC------HH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCCCeeeecCcchhccCccHHHHHHHHHHHHHHhcc------HH
Confidence 45788999999999999999999998765 32 23567889999999999999999999999999987532 33
Q ss_pred HHH-HHHHHHHHHHHhhCchHHHHHh-ccC-cCccccc
Q 025925 211 VIL-GPIFLTLLLLFISGIPLLEVCL-SYY-THARAYI 245 (246)
Q Consensus 211 ~~i-~p~~~~~ll~~~sgi~~~E~~~-~ky-~~Y~~Y~ 245 (246)
.++ ++++++.++ ..+++.||+.+ +|| ++|++|+
T Consensus 148 ~~~~~~~~~~~~~--~~ri~~EE~~L~~~fG~~Y~~Y~ 183 (194)
T 4a2n_B 148 VLIFGIVAWAILY--FIRVPKEEELLIEEFGDEYIEYM 183 (194)
T ss_dssp HHHHHHHHHHHHH--HHHHHHHHHHHHHHHTHHHHHHH
T ss_pred HHHHHHHHHHHHH--HHHHHHHHHHHHHHhCHHHHHHH
Confidence 333 344333332 34589999976 456 6899997
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00