Citrus Sinensis ID: 025925


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240------
MGTVIDSHFLALTAIVTVGYQLLFFVITALFKFDKVTDFAGSTNFIIIALLTLILKGSWHFRQVVLTFLAVVWGLRLALFLLMRILNWGEDRRFDEMRSNLGKLAIFWIFQAVWVWTVSLPVTVVNASDRDPSVQAVDVIGWIMWSVGVSIEAIADQQKLSFKNSPENRGKWCNVGFWKYSRHPNYFGEIFLWWGIFVASTPVLDGAEWLVILGPIFLTLLLLFISGIPLLEVCLSYYTHARAYIL
ccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEccccHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHcccccccccc
cccEccHHHHHHHHHHHHHHHHHHHHHHHHHccccHEHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHcccHHEEcccccHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHccccHHHcc
MGTVIDSHFLALTAIVTVGYQLLFFVITALFkfdkvtdfagsTNFIIIALLTLILKGSWHFRQVVLTFLAVVWGLRLALFLLMRILNWGEDRRFDEMRSNLGKLAIFWIFQAVWVWTVSLPvtvvnasdrdpsvqaVDVIGWIMWSVGVSIEAIADQQklsfknspenrgkwcnvgfwkysrhpnyfgeIFLWWGIFVastpvldgaeWLVILGPIFLTLLLLFISGIPLLEVCLSYYTHARAYIL
MGTVIDSHFLALTAIVTVGYQLLFFVITALFKFDKVTDFAGSTNFIIIALLTLILKGSWHFRQVVLTFLAVVWGLRLALFLLMRILNWGEDRRFDEMRSNLGKLAIFWIFQAVWVWTVSLPVTVVNASDRDPSVQAVDVIGWIMWSVGVSIEAIADQQklsfknspenrgKWCNVGFWKYSRHPNYFGEIFLWWGIFVASTPVLDGAEWLVILGPIFLTLLLLFISGIPLLEVCLSYYTHARAYIL
MGTVIDSHFLALTAIVTVGYQLLFFVITALFKFDKVTDFAGSTNFIIIALLTLILKGSWHFRQVVLTFLAVVWGlrlalfllmrilNWGEDRRFDEMRSNLGKLAIFWIFQAVWVWTVSLPVTVVNASDRDPSVQAVDVIGWIMWSVGVSIEAIADQQKLSFKNSPENRGKWCNVGFWKYSRHPNYFGEIFLWWGIFVASTPVLDGAEWlvilgpifltllllfisgipllEVCLSYYTHARAYIL
***VIDSHFLALTAIVTVGYQLLFFVITALFKFDKVTDFAGSTNFIIIALLTLILKGSWHFRQVVLTFLAVVWGLRLALFLLMRILNWGEDRRFDEMRSNLGKLAIFWIFQAVWVWTVSLPVTVVNASDRDPSVQAVDVIGWIMWSVGVSIEAIADQQKLSFK****NRGKWCNVGFWKYSRHPNYFGEIFLWWGIFVASTPVLDGAEWLVILGPIFLTLLLLFISGIPLLEVCLSYYTHARAYI*
*GTVIDSHFLALTAIVTVGYQLLFFVITALFKFDKVTDFAGSTNFIIIALLTLILKGSWHFRQVVLTFLAVVWGLRLALFLLMRILNWGEDRRFDEMRSNLGKLAIFWIFQAVWVWTVSLPVTVVNASDRDPSVQAVDVIGWIMWSVGVSIEAIADQQKLSFKNSPENRGKWCNVGFWKYSRHPNYFGEIFLWWGIFVASTPVLDGAEWLVILGPIFLTLLLLFISGIPLLEVC*SYYT**RAYIL
MGTVIDSHFLALTAIVTVGYQLLFFVITALFKFDKVTDFAGSTNFIIIALLTLILKGSWHFRQVVLTFLAVVWGLRLALFLLMRILNWGEDRRFDEMRSNLGKLAIFWIFQAVWVWTVSLPVTVVNASDRDPSVQAVDVIGWIMWSVGVSIEAIADQQKLSFKNSPENRGKWCNVGFWKYSRHPNYFGEIFLWWGIFVASTPVLDGAEWLVILGPIFLTLLLLFISGIPLLEVCLSYYTHARAYIL
*GTVIDSHFLALTAIVTVGYQLLFFVITALFKFDKVTDFAGSTNFIIIALLTLILKGSWHFRQVVLTFLAVVWGLRLALFLLMRILNWGEDRRFDEMRSNLGKLAIFWIFQAVWVWTVSLPVTVVNASDRDPSVQAVDVIGWIMWSVGVSIEAIADQQKLSFKNSPENRGKWCNVGFWKYSRHPNYFGEIFLWWGIFVASTPVLDGAEWLVILGPIFLTLLLLFISGIPLLEVCLSYYTHAR*YIL
iiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiii
oooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiii
oooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiii
ooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiHHHHHHHHHHHHHHHHHooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiii
oooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MGTVIDSHFLALTAIVTVGYQLLFFVITALFKFDKVTDFAGSTNFIIIALLTLILKGSWHFRQVVLTFLAVVWGLRLALFLLMRILNWGEDRRFDEMRSNLGKLAIFWIFQAVWVWTVSLPVTVVNASDRDPSVQAVDVIGWIMWSVGVSIEAIADQQKLSFKNSPENRGKWCNVGFWKYSRHPNYFGEIFLWWGIFVASTPVLDGAEWLVILGPIFLTLLLLFISGIPLLEVCLSYYTHARAYIL
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query246
359491022291 PREDICTED: uncharacterized protein LOC10 0.943 0.797 0.875 1e-117
297734310307 unnamed protein product [Vitis vinifera] 0.943 0.755 0.875 1e-117
357118017293 PREDICTED: uncharacterized protein LOC10 0.951 0.798 0.829 1e-113
413933314289 putative domain of unknown function (DUF 0.943 0.802 0.836 1e-112
413933316293 putative domain of unknown function (DUF 0.943 0.791 0.836 1e-111
259490034291 uncharacterized protein LOC100304216 [Ze 0.943 0.797 0.836 1e-111
449439449300 PREDICTED: uncharacterized protein LOC10 0.943 0.773 0.844 1e-110
115454871291 Os03g0708400 [Oryza sativa Japonica Grou 0.951 0.804 0.833 1e-109
326506410291 predicted protein [Hordeum vulgare subsp 0.943 0.797 0.806 1e-109
224133212292 predicted protein [Populus trichocarpa] 0.943 0.794 0.879 1e-108
>gi|359491022|ref|XP_003634205.1| PREDICTED: uncharacterized protein LOC100853969 [Vitis vinifera] Back     alignment and taxonomy information
 Score =  426 bits (1094), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 203/232 (87%), Positives = 220/232 (94%)

Query: 1   MGTVIDSHFLALTAIVTVGYQLLFFVITALFKFDKVTDFAGSTNFIIIALLTLILKGSWH 60
           MGTVIDSHFLALTAIVTVGYQ LFF+ITAL KFDKVTDFAGSTNF+I+A+LTL+LKG+WH
Sbjct: 1   MGTVIDSHFLALTAIVTVGYQFLFFIITALLKFDKVTDFAGSTNFVILAVLTLVLKGTWH 60

Query: 61  FRQVVLTFLAVVWGLRLALFLLMRILNWGEDRRFDEMRSNLGKLAIFWIFQAVWVWTVSL 120
           FRQVVLT L V+WGLRL +FLLMRIL WGEDRRFDEMRSNLGKLA+FW FQAVWVWTVSL
Sbjct: 61  FRQVVLTLLVVIWGLRLGIFLLMRILQWGEDRRFDEMRSNLGKLAVFWTFQAVWVWTVSL 120

Query: 121 PVTVVNASDRDPSVQAVDVIGWIMWSVGVSIEAIADQQKLSFKNSPENRGKWCNVGFWKY 180
           PVT+VNAS RDPS+QA D+IGWIMWSVG++IEA ADQQKLSFKNSPENRGKWCNVG WKY
Sbjct: 121 PVTIVNASGRDPSLQAADIIGWIMWSVGITIEASADQQKLSFKNSPENRGKWCNVGVWKY 180

Query: 181 SRHPNYFGEIFLWWGIFVASTPVLDGAEWLVILGPIFLTLLLLFISGIPLLE 232
           +RHPNYFGEI LWWGIFVASTPVL+GAEWLVILGPIFLTLLLLF+SGIPLLE
Sbjct: 181 TRHPNYFGEILLWWGIFVASTPVLEGAEWLVILGPIFLTLLLLFVSGIPLLE 232




Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297734310|emb|CBI15557.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|357118017|ref|XP_003560756.1| PREDICTED: uncharacterized protein LOC100830682 [Brachypodium distachyon] Back     alignment and taxonomy information
>gi|413933314|gb|AFW67865.1| putative domain of unknown function (DUF1295) containing family protein [Zea mays] Back     alignment and taxonomy information
>gi|413933316|gb|AFW67867.1| putative domain of unknown function (DUF1295) containing family protein [Zea mays] Back     alignment and taxonomy information
>gi|259490034|ref|NP_001159138.1| uncharacterized protein LOC100304216 [Zea mays] gi|223942193|gb|ACN25180.1| unknown [Zea mays] gi|413933315|gb|AFW67866.1| putative domain of unknown function (DUF1295) containing family protein [Zea mays] Back     alignment and taxonomy information
>gi|449439449|ref|XP_004137498.1| PREDICTED: uncharacterized protein LOC101219154 [Cucumis sativus] Back     alignment and taxonomy information
>gi|115454871|ref|NP_001051036.1| Os03g0708400 [Oryza sativa Japonica Group] gi|13937298|gb|AAK50129.1|AC087797_14 unknown protein [Oryza sativa Japonica Group] gi|108710687|gb|ABF98482.1| expressed protein [Oryza sativa Japonica Group] gi|113549507|dbj|BAF12950.1| Os03g0708400 [Oryza sativa Japonica Group] gi|125545445|gb|EAY91584.1| hypothetical protein OsI_13219 [Oryza sativa Indica Group] gi|125587653|gb|EAZ28317.1| hypothetical protein OsJ_12291 [Oryza sativa Japonica Group] gi|215694680|dbj|BAG89871.1| unnamed protein product [Oryza sativa Japonica Group] Back     alignment and taxonomy information
>gi|326506410|dbj|BAJ86523.1| predicted protein [Hordeum vulgare subsp. vulgare] Back     alignment and taxonomy information
>gi|224133212|ref|XP_002321511.1| predicted protein [Populus trichocarpa] gi|222868507|gb|EEF05638.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query246
TAIR|locus:2027774302 AT1G73650 [Arabidopsis thalian 0.849 0.692 0.727 1.2e-83
TAIR|locus:2194090305 AT1G18180 [Arabidopsis thalian 0.849 0.685 0.703 9.4e-82
UNIPROTKB|G4N6G0335 MGG_03731 "Uncharacterized pro 0.825 0.605 0.440 4.4e-45
FB|FBgn0035914316 CG6282 [Drosophila melanogaste 0.837 0.651 0.428 5.6e-45
ZFIN|ZDB-GENE-030131-3630288 si:ch211-210c8.6 "si:ch211-210 0.813 0.694 0.395 2.9e-39
UNIPROTKB|Q74AM9256 GSU2323 "Uncharacterized prote 0.796 0.765 0.333 3.2e-26
TIGR_CMR|GSU_2323256 GSU_2323 "membrane protein, pu 0.796 0.765 0.333 3.2e-26
DICTYBASE|DDB_G0279829267 DDB_G0279829 "DUF1295 family p 0.760 0.700 0.312 3.4e-22
UNIPROTKB|Q722V9257 LMOf2365_0620 "Putative membra 0.776 0.743 0.295 9e-22
UNIPROTKB|O53731256 Rv0446c "POSSIBLE CONSERVED TR 0.739 0.710 0.288 4.6e-18
TAIR|locus:2027774 AT1G73650 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 838 (300.0 bits), Expect = 1.2e-83, P = 1.2e-83
 Identities = 152/209 (72%), Positives = 172/209 (82%)

Query:     1 MGTVIDSHFLALTAIVTVGYQLLFFVITALFKFDKVTDFAGSTNFIIIALLTLILKGSWH 60
             MGTV+DSHFLALTAIVTV YQ +FFVITALFKFD+VTDFAGSTNF+I+A+LTL+LK SWH
Sbjct:     1 MGTVLDSHFLALTAIVTVIYQFIFFVITALFKFDQVTDFAGSTNFVILAVLTLVLKASWH 60

Query:    61 FRQVVLTFLAVVWGXXXXXXXXXXXXNWGEDRRFDEMRSNLGKLAIFWIFQAVWVWTVSL 120
             FRQ+VLT L VVWG             WGEDRRFDE R N+ +L IFW  QAVWVWTVSL
Sbjct:    61 FRQIVLTLLVVVWGLRLGIFLLMRILQWGEDRRFDEQRGNIVRLIIFWTLQAVWVWTVSL 120

Query:   121 PVTVVNASDRDPSVQAVDVIGWIMWSVGVSIEAIADQQKLSFKNSPENRGKWCNVGFWKY 180
             P+T+VNASD   S++  DVIGW MW  G  IEA ADQQKLSFKNSPENRGKWC+VG WKY
Sbjct:   121 PLTLVNASDGGGSLKPADVIGWTMWVFGFLIEAAADQQKLSFKNSPENRGKWCDVGVWKY 180

Query:   181 SRHPNYFGEIFLWWGIFVASTPVLDGAEW 209
             SRHPNYFGE+ LWWGIFVA++PVL+GAE+
Sbjct:   181 SRHPNYFGEMLLWWGIFVAASPVLEGAEY 209




GO:0005737 "cytoplasm" evidence=IEA
GO:0005739 "mitochondrion" evidence=ISM
GO:0006629 "lipid metabolic process" evidence=IEA
GO:0009507 "chloroplast" evidence=ISM
GO:0016021 "integral to membrane" evidence=IEA
GO:0016627 "oxidoreductase activity, acting on the CH-CH group of donors" evidence=IEA
GO:0005886 "plasma membrane" evidence=IDA
GO:0005773 "vacuole" evidence=IDA
GO:0005774 "vacuolar membrane" evidence=IDA
GO:0009506 "plasmodesma" evidence=IDA
GO:0005794 "Golgi apparatus" evidence=IDA
GO:0009627 "systemic acquired resistance" evidence=RCA
GO:0009744 "response to sucrose stimulus" evidence=RCA
GO:0009813 "flavonoid biosynthetic process" evidence=RCA
GO:0010224 "response to UV-B" evidence=RCA
GO:0031347 "regulation of defense response" evidence=RCA
GO:0005783 "endoplasmic reticulum" evidence=IDA
TAIR|locus:2194090 AT1G18180 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|G4N6G0 MGG_03731 "Uncharacterized protein" [Magnaporthe oryzae 70-15 (taxid:242507)] Back     alignment and assigned GO terms
FB|FBgn0035914 CG6282 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-030131-3630 si:ch211-210c8.6 "si:ch211-210c8.6" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|Q74AM9 GSU2323 "Uncharacterized protein" [Geobacter sulfurreducens PCA (taxid:243231)] Back     alignment and assigned GO terms
TIGR_CMR|GSU_2323 GSU_2323 "membrane protein, putative" [Geobacter sulfurreducens PCA (taxid:243231)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0279829 DDB_G0279829 "DUF1295 family protein" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
UNIPROTKB|Q722V9 LMOf2365_0620 "Putative membrane protein" [Listeria monocytogenes serotype 4b str. F2365 (taxid:265669)] Back     alignment and assigned GO terms
UNIPROTKB|O53731 Rv0446c "POSSIBLE CONSERVED TRANSMEMBRANE PROTEIN" [Mycobacterium tuberculosis H37Rv (taxid:83332)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query246
pfam06966235 pfam06966, DUF1295, Protein of unknown function (D 3e-88
COG3752272 COG3752, COG3752, Steroid 5-alpha reductase family 7e-37
>gnl|CDD|219244 pfam06966, DUF1295, Protein of unknown function (DUF1295) Back     alignment and domain information
 Score =  260 bits (667), Expect = 3e-88
 Identities = 103/215 (47%), Positives = 141/215 (65%), Gaps = 6/215 (2%)

Query: 24  FFVITALFKFDKVTDFAGSTNFIIIALLTLILKGSWHFRQVVLTFLAVVWGLRLALFLLM 83
           F++I+       + D A    F+I+A+LT +L      R++++T L  +WGLRL   LL 
Sbjct: 1   FWLISRRTGNYGLVDVAWGGGFVILAVLTALLSEGATLRRMLVTLLVTLWGLRLGWHLLR 60

Query: 84  RILNWGEDRRFDEMRSNLGK------LAIFWIFQAVWVWTVSLPVTVVNASDRDPSVQAV 137
           R   WGED R+ ++R N GK      L IF+I QAV ++ VSLPV + NAS  +P++ A 
Sbjct: 61  RTWGWGEDYRYVDLRKNWGKWPYLLSLLIFFILQAVLLYIVSLPVYLANASGPNPALGAW 120

Query: 138 DVIGWIMWSVGVSIEAIADQQKLSFKNSPENRGKWCNVGFWKYSRHPNYFGEIFLWWGIF 197
           D+IG  +W VG+  EA+ADQQ  +FK  P N+GK C+ G W+YSRHPNYFGE  +WWGIF
Sbjct: 121 DIIGIAIWLVGIGFEALADQQLWAFKGDPANKGKVCDTGLWRYSRHPNYFGEALIWWGIF 180

Query: 198 VASTPVLDGAEWLVILGPIFLTLLLLFISGIPLLE 232
           + +  VL G EW  I GP+ +TLLL+F+SGIPLLE
Sbjct: 181 LIAINVLSGLEWWTIAGPLLMTLLLVFVSGIPLLE 215


This family contains a number of bacterial and eukaryotic proteins of unknown function that are approximately 300 residues long. Length = 235

>gnl|CDD|226275 COG3752, COG3752, Steroid 5-alpha reductase family enzyme [General function prediction only] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 246
PF06966235 DUF1295: Protein of unknown function (DUF1295); In 100.0
COG3752272 Steroid 5-alpha reductase family enzyme [General f 100.0
KOG4650311 consensus Predicted steroid reductase [General fun 100.0
PF01222432 ERG4_ERG24: Ergosterol biosynthesis ERG4/ERG24 fam 99.73
KOG1435428 consensus Sterol reductase/lamin B receptor [Lipid 99.59
COG2020187 STE14 Putative protein-S-isoprenylcysteine methylt 99.57
PF04191106 PEMT: Phospholipid methyltransferase ; InterPro: I 99.49
KOG1638257 consensus Steroid reductase [Lipid transport and m 99.43
PF0414094 ICMT: Isoprenylcysteine carboxyl methyltransferase 99.37
PF02544150 Steroid_dh: 3-oxo-5-alpha-steroid 4-dehydrogenase 99.21
PLN02392260 probable steroid reductase DET2 99.2
KOG2628201 consensus Farnesyl cysteine-carboxyl methyltransfe 99.11
COG1755172 Uncharacterized protein conserved in bacteria [Fun 99.1
PLN02560308 enoyl-CoA reductase 99.09
PLN03164323 3-oxo-5-alpha-steroid 4-dehydrogenase, C-terminal 98.98
KOG1639297 consensus Steroid reductase required for elongatio 97.77
KOG1640304 consensus Predicted steroid reductase [Lipid trans 97.68
PF07298191 NnrU: NnrU protein; InterPro: IPR009915 This famil 91.66
>PF06966 DUF1295: Protein of unknown function (DUF1295); InterPro: IPR010721 This family contains a number of bacterial and eukaryotic proteins of unknown function that are approximately 300 residues long Back     alignment and domain information
Probab=100.00  E-value=3.2e-60  Score=416.28  Aligned_cols=222  Identities=42%  Similarity=0.893  Sum_probs=203.9

Q ss_pred             HHHHHHhccCeEeecccccHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHhHHHHHhhhCcccchhHHHHHHhhh--
Q 025925           25 FVITALFKFDKVTDFAGSTNFIIIALLTLILKGSWHFRQVVLTFLAVVWGLRLALFLLMRILNWGEDRRFDEMRSNLG--  102 (246)
Q Consensus        25 ~~~~~~~~~~~~~D~~w~~~~~~~a~~~~~~~~~~~~r~~l~~~l~~~W~~RL~~~l~~R~~~~~eD~Ry~~~r~~~~--  102 (246)
                      |+++..+||++++|+.||++++++++.++..+++.+.|++++++++++||+||+.|+++|..+++||+||+++|++++  
T Consensus         2 w~~s~~~~n~s~vD~~ws~~~~~~a~~~~~~~~~~~~r~~lv~~lv~~W~~RL~~~l~~R~~~~~eD~R~~~~r~~~~~~   81 (235)
T PF06966_consen    2 WIISLATRNESIVDILWSFGFVLVAWVYALFSDGFSPRQLLVAALVIVWGLRLGYFLFRRNLGWGEDWRYDDLRKKWGEW   81 (235)
T ss_pred             eeehHhhCCCCEEECcccHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHHhcCcc
Confidence            678999999999999999999999999988888889999999999999999999999999988899999999999863  


Q ss_pred             ----HHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCcccccccc
Q 025925          103 ----KLAIFWIFQAVWVWTVSLPVTVVNASDRDPSVQAVDVIGWIMWSVGVSIEAIADQQKLSFKNSPENRGKWCNVGFW  178 (246)
Q Consensus       103 ----~~~~~~~~Q~~~~~~~~lP~~~~~~~~~~~~l~~~~~~g~~l~~~g~~le~~ad~q~~~f~~~~~~~g~li~~Glw  178 (246)
                          +++.+|++|+++++++++|+++++..+++++++..|++|++++++|+++|++||.||.+||++|+|+||+|++|+|
T Consensus        82 ~~~~~~~~~~~~q~~~~~~~~lP~~~~~~~~~~~~~~~~~~~g~~l~~~g~~~E~~AD~Q~~~fk~~~~n~g~~~~~GLw  161 (235)
T PF06966_consen   82 FWPFSFFFIFLFQALLVWLISLPVYLANSSPPNPPLNWLDILGIALFLIGFLLETVADQQKYRFKKDPANKGKFCTTGLW  161 (235)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCcccCCccccCCee
Confidence                5678899999999999999999876555667899999999999999999999999999999999999999999999


Q ss_pred             ccccCcchHHHHHHHHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhCchHHHHHh-ccC---cCcccccC
Q 025925          179 KYSRHPNYFGEIFLWWGIFVASTPVLDGAEWLVILGPIFLTLLLLFISGIPLLEVCL-SYY---THARAYIL  246 (246)
Q Consensus       179 ~~sRHPNYfge~l~w~g~~l~~~~~~~~~~~~~~i~p~~~~~ll~~~sgi~~~E~~~-~ky---~~Y~~Y~~  246 (246)
                      +||||||||||+++|+|+++++.+...+..++++++|+++++++.++||+|..||++ +||   |+|+||+.
T Consensus       162 ~~sRHPNYfGE~l~W~g~~~~a~~~~~~~~~~~~~~pl~~~~~l~~~sgip~~E~~~~~kyg~~~~Y~~Y~~  233 (235)
T PF06966_consen  162 RYSRHPNYFGEILFWWGIYLAAISSGSGWLWWAIIGPLFMTLLLLFVSGIPLLEKRMAKKYGDRPAYQEYQR  233 (235)
T ss_pred             eeeeCchHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHhcCCCHhHHHHHh
Confidence            999999999999999999999987644445678899999999999999999999875 668   78999974



>COG3752 Steroid 5-alpha reductase family enzyme [General function prediction only] Back     alignment and domain information
>KOG4650 consensus Predicted steroid reductase [General function prediction only] Back     alignment and domain information
>PF01222 ERG4_ERG24: Ergosterol biosynthesis ERG4/ERG24 family; InterPro: IPR001171 The two fungal enzymes, C-14 sterol reductase (gene ERG24 in budding yeast and erg3 in Neurospora crassa) and C-24(28) sterol reductase (gene ERG4 in budding yeast and sts1 in fission yeast), are involved in ergosterol biosynthesis Back     alignment and domain information
>KOG1435 consensus Sterol reductase/lamin B receptor [Lipid transport and metabolism; Signal transduction mechanisms] Back     alignment and domain information
>COG2020 STE14 Putative protein-S-isoprenylcysteine methyltransferase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PF04191 PEMT: Phospholipid methyltransferase ; InterPro: IPR007318 The Saccharomyces cerevisiae (Baker's yeast) phospholipid methyltransferase (2 Back     alignment and domain information
>KOG1638 consensus Steroid reductase [Lipid transport and metabolism] Back     alignment and domain information
>PF04140 ICMT: Isoprenylcysteine carboxyl methyltransferase (ICMT) family ; InterPro: IPR007269 The isoprenylcysteine o-methyltransferase (2 Back     alignment and domain information
>PF02544 Steroid_dh: 3-oxo-5-alpha-steroid 4-dehydrogenase ; InterPro: IPR001104 Synonym(s): Steroid 5-alpha-reductase 3-oxo-5-alpha-steroid 4-dehydrogenases, 1 Back     alignment and domain information
>PLN02392 probable steroid reductase DET2 Back     alignment and domain information
>KOG2628 consensus Farnesyl cysteine-carboxyl methyltransferase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>COG1755 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information
>PLN02560 enoyl-CoA reductase Back     alignment and domain information
>PLN03164 3-oxo-5-alpha-steroid 4-dehydrogenase, C-terminal domain containing protein; Provisional Back     alignment and domain information
>KOG1639 consensus Steroid reductase required for elongation of the very long chain fatty acids [Lipid transport and metabolism] Back     alignment and domain information
>KOG1640 consensus Predicted steroid reductase [Lipid transport and metabolism] Back     alignment and domain information
>PF07298 NnrU: NnrU protein; InterPro: IPR009915 This family consists of several plant and bacterial NnrU proteins Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query246
4a2n_B194 Isoprenylcysteine carboxyl methyltransferase; memb 99.83
>4a2n_B Isoprenylcysteine carboxyl methyltransferase; membrane protein, RAS and RHO gtpases signallin; HET: SAH PLM CDL; 3.40A {Methanosarcina acetivorans} Back     alignment and structure
Probab=99.83  E-value=5.3e-20  Score=156.12  Aligned_cols=104  Identities=15%  Similarity=0.230  Sum_probs=80.6

Q ss_pred             CcHHHHHHHHHHHHHHHHHHHHHHHHHHh-cc--CCCCCCccccccccccccCcchHHHHHHHHHHHHhhcCCCCchhHH
Q 025925          134 VQAVDVIGWIMWSVGVSIEAIADQQKLSF-KN--SPENRGKWCNVGFWKYSRHPNYFGEIFLWWGIFVASTPVLDGAEWL  210 (246)
Q Consensus       134 l~~~~~~g~~l~~~g~~le~~ad~q~~~f-~~--~~~~~g~li~~Glw~~sRHPNYfge~l~w~g~~l~~~~~~~~~~~~  210 (246)
                      ..+..++|.+++++|+.++..||.|+.++ +.  +++++++++++|+|++||||||+|+++.|+|+++...+      ++
T Consensus        74 p~~~~~~G~~l~l~G~~l~~~a~~~Lg~~f~~~~~~~~~~~Lvt~G~y~~vRHP~Y~G~~l~~~g~~l~~~s------~~  147 (194)
T 4a2n_B           74 PDSIRLFALIVTFLNIGLFTKIHKDLGNNWSAILEIKDGHKLVKEGIYKNIRHPMYAHLWLWVITQGIILSN------WV  147 (194)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHGGGCCSSCCEETTCCCCCSSTTTTBSSHHHHHHHHHHHHHHHHHTC------HH
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCCCeeeecCcchhccCccHHHHHHHHHHHHHHhcc------HH
Confidence            45788999999999999999999998765 32  23567889999999999999999999999999987532      33


Q ss_pred             HHH-HHHHHHHHHHHhhCchHHHHHh-ccC-cCccccc
Q 025925          211 VIL-GPIFLTLLLLFISGIPLLEVCL-SYY-THARAYI  245 (246)
Q Consensus       211 ~~i-~p~~~~~ll~~~sgi~~~E~~~-~ky-~~Y~~Y~  245 (246)
                      .++ ++++++.++  ..+++.||+.+ +|| ++|++|+
T Consensus       148 ~~~~~~~~~~~~~--~~ri~~EE~~L~~~fG~~Y~~Y~  183 (194)
T 4a2n_B          148 VLIFGIVAWAILY--FIRVPKEEELLIEEFGDEYIEYM  183 (194)
T ss_dssp             HHHHHHHHHHHHH--HHHHHHHHHHHHHHHTHHHHHHH
T ss_pred             HHHHHHHHHHHHH--HHHHHHHHHHHHHHhCHHHHHHH
Confidence            333 344333332  34589999976 456 6899997




Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00