Citrus Sinensis ID: 025954


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-----
MASPSIKFASSLYLLIAFAFFLQTAFGVDPLFHFCSSSENFTANGPYETNLNKLIGYLDYQAPPTGFGKGALGQRPNKAYGLALCRGDVSSSDCKTCIVDASGEIRKRCPYNKAAIIWYDNCLLKYTNTEFFGQIDNKNKFYMWNVRVVTEPVSFNQRTKELLTQLAEKAYVTPKLYAVGEMELGKSNKLYGLTQCTRDLSSVDCKKCLDGIIRELPSCCDGKEGGRVVSGSCNFRYEIYPFVNA
cccccHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccHHHHHHHHHHHHHHHcccccccEEEEcccccccEEEEEEccccccHHHHHHHHHHHHHHHHHHcccccEEEEEEccEEEEEccccccccccccccEEEEccccccccHHHHHHHHHHHHHHHHHHHccccEEEEEEEEEcccccEEEEEEccccccHHHHHHHHHHHHHHHcccccccccEEEEcccEEEEEcccccccc
cccHHHHHHHHHHHHHHHHHHHHHHccccccHcccccccccccccHHHHHHHHHHHHccccccccccEcccccccccEEEEEEEEcccccHHHHHHHHHHHHHHHHHHccccccEEEEEccEEEEEccccccccccccccEEEEcccccccHHHHHHHHHHHHHHHHHHHHcccccEcccccccccccEEEEEEEccccccHHHHHHHHHHHHHHcHHHcccccccEEEccccEEEEEEEccccc
MASPSIKFASSLYLLIAFAFFLQtafgvdplfhfcsssenftangpyetnLNKLIGyldyqapptgfgkgalgqrpnkaYGLAlcrgdvsssdcktcivdasgeirkrcpynkaAIIWYDncllkytnteffgqidnknkFYMWNVRVVTEPVSFNQRTKELLTQLAEKAYVTPKLYAVGemelgksnklygltqctrdlssvdcKKCLDGIirelpsccdgkeggrvvsgscnfryeiypfvna
MASPSIKFASSLYLLIAFAFFLQTAFGVDPLFHFCSSSENFTANGPYETNLNKLIGYLDYQAPPTGFGKGALGQRPNKAYGLALCRGDVSSSDCKTCIVdasgeirkrcpynKAAIIWYDNCLLKYTNTEFFGQIDNKNKFYMWNVRVVTEPVSFNQRTKELLTQLAEKAYVTPKLYAVGEMELGKSNKLYGLTQCTRDLSSVDCKKCLDGIIRelpsccdgkeggrvvsgscnfryeiypfvna
MASPSIKFASSLYLLIAFAFFLQTAFGVDPLFHFCSSSENFTANGPYETNLNKLIGYLDYQAPPTGFGKGALGQRPNKAYGLALCRGDVSSSDCKTCIVDASGEIRKRCPYNKAAIIWYDNCLLKYTNTEFFGQIDNKNKFYMWNVRVVTEPVSFNQRTKELLTQLAEKAYVTPKLYAVGEMELGKSNKLYGLTQCTRDLSSVDCKKCLDGIIRELPSCCDGKEGGRVVSGSCNFRYEIYPFVNA
******KFASSLYLLIAFAFFLQTAFGVDPLFHFCSSSENFTANGPYETNLNKLIGYLDYQAPPTGFGKGALGQRPNKAYGLALCRGDVSSSDCKTCIVDASGEIRKRCPYNKAAIIWYDNCLLKYTNTEFFGQIDNKNKFYMWNVRVVTEPVSFNQRTKELLTQLAEKAYVTPKLYAVGEMELGKSNKLYGLTQCTRDLSSVDCKKCLDGIIRELPSCCDGKEGGRVVSGSCNFRYEIYPFV**
******K*ASSLYLLIAFAFFLQTAFGVDPLFHFCSSSENFTANGPYETNLNKLIGYLDYQAPPTGFGKGALGQRPNKAYGLALCRGDVSSSDCKTCIVDASGEIRKRCPYNKAAIIWYDNCLLKYTNTEFFGQIDNKNKFYMWNVRVVTEPVSFNQRTKELLTQLAEKAYVTPKLYAVGEMELGKSNKLYGLTQCTRDLSSVDCKKCLDGIIRELPSCCDGKEGGRVVSGSCNFRYEIYPFVNA
MASPSIKFASSLYLLIAFAFFLQTAFGVDPLFHFCSSSENFTANGPYETNLNKLIGYLDYQAPPTGFGKGALGQRPNKAYGLALCRGDVSSSDCKTCIVDASGEIRKRCPYNKAAIIWYDNCLLKYTNTEFFGQIDNKNKFYMWNVRVVTEPVSFNQRTKELLTQLAEKAYVTPKLYAVGEMELGKSNKLYGLTQCTRDLSSVDCKKCLDGIIRELPSCCDGKEGGRVVSGSCNFRYEIYPFVNA
**SPSIKFASSLYLLIAFAFFLQTAFGVDPLFHFCSSSENFTANGPYETNLNKLIGYLDYQAPPTGFGKGALGQRPNKAYGLALCRGDVSSSDCKTCIVDASGEIRKRCPYNKAAIIWYDNCLLKYTNTEFFGQIDNKNKFYMWNVRVVTEPVSFNQRTKELLTQLAEKAYVTPKLYAVGEMELGKSNKLYGLTQCTRDLSSVDCKKCLDGIIRELPSCCDGKEGGRVVSGSCNFRYEIYPFVNA
iiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MASPSIKFASSLYLLIAFAFFLQTAFGVDPLFHFCSSSENFTANGPYETNLNKLIGYLDYQAPPTGFGKGALGQRPNKAYGLALCRGDVSSSDCKTCIVDASGEIRKRCPYNKAAIIWYDNCLLKYTNTEFFGQIDNKNKFYMWNVRVVTEPVSFNQRTKELLTQLAEKAYVTPKLYAVGEMELGKSNKLYGLTQCTRDLSSVDCKKCLDGIIRELPSCCDGKEGGRVVSGSCNFRYEIYPFVNA
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query245 2.2.26 [Sep-21-2011]
Q9LRJ9252 Cysteine-rich repeat secr yes no 0.865 0.841 0.611 5e-74
Q9M2I5258 Putative cysteine-rich re no no 0.975 0.926 0.479 7e-59
Q9LRL8256 Putative cysteine-rich re no no 0.987 0.945 0.407 8e-50
Q9LRL7279 Putative cysteine-rich re no no 0.865 0.759 0.431 6e-46
Q9LRL4262 Putative cysteine-rich re no no 0.865 0.809 0.441 2e-45
Q9LRL2259 Putative cysteine-rich re no no 0.889 0.841 0.412 7e-45
Q9M0X5 675 Cysteine-rich receptor-li no no 0.967 0.351 0.379 1e-43
Q9LRK9257 Putative cysteine-rich re no no 0.857 0.817 0.413 1e-42
Q9SIP6255 Putative cysteine-rich re no no 0.844 0.811 0.438 2e-42
Q9LRK8256 Cysteine-rich repeat secr no no 0.865 0.828 0.414 2e-42
>sp|Q9LRJ9|CRR38_ARATH Cysteine-rich repeat secretory protein 38 OS=Arabidopsis thaliana GN=CRRSP38 PE=2 SV=1 Back     alignment and function desciption
 Score =  277 bits (708), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 132/216 (61%), Positives = 163/216 (75%), Gaps = 4/216 (1%)

Query: 31  LFHFCSSSE-NFTANGPYETNLNKLIGYLDYQAPPTGFGKGALGQRPNKAYGLALCRGDV 89
           LFH CS  E +FT+   YE+NLN L   L Y+ P TGF   + G  PN   GLALCRGD 
Sbjct: 35  LFHKCSDIEGSFTSKSLYESNLNNLFSQLSYKVPSTGFAASSTGNTPNNVNGLALCRGDA 94

Query: 90  SSSDCKTCIVDASGEIRKRCPYNKAAIIWYDNCLLKYTNTEFFGQIDNKNKFYMWNVRVV 149
           SSSDC++C+  A  E+R+RCP NKA I+WYDNCL+KY++T FFG+ID +N+FY++NV+ V
Sbjct: 95  SSSDCRSCLETAIPELRQRCPNNKAGIVWYDNCLVKYSSTNFFGKIDFENRFYLYNVKNV 154

Query: 150 TEPVSFNQRTKELLTQLAEKAYV--TPKLYAVGEMELGKSNKLYGLTQCTRDLSSVDCKK 207
           ++P +FN +TK LLT+L +KA      KL+A GE  +GK NKLYGL QCTRDL S+ CK 
Sbjct: 155 SDPSTFNSQTKALLTELTKKATTRDNQKLFATGEKNIGK-NKLYGLVQCTRDLKSITCKA 213

Query: 208 CLDGIIRELPSCCDGKEGGRVVSGSCNFRYEIYPFV 243
           CL+GII ELP+CCDGKEGGRVV GSCNFRYEIYPFV
Sbjct: 214 CLNGIIGELPNCCDGKEGGRVVGGSCNFRYEIYPFV 249





Arabidopsis thaliana (taxid: 3702)
>sp|Q9M2I5|CRR61_ARATH Putative cysteine-rich repeat secretory protein 61 OS=Arabidopsis thaliana GN=CRRSP61 PE=3 SV=1 Back     alignment and function description
>sp|Q9LRL8|CRR21_ARATH Putative cysteine-rich repeat secretory protein 21 OS=Arabidopsis thaliana GN=CRRSP21 PE=5 SV=2 Back     alignment and function description
>sp|Q9LRL7|CRR22_ARATH Putative cysteine-rich repeat secretory protein 22 OS=Arabidopsis thaliana GN=CRRSP22 PE=5 SV=2 Back     alignment and function description
>sp|Q9LRL4|CRR24_ARATH Putative cysteine-rich repeat secretory protein 24 OS=Arabidopsis thaliana GN=CRRSP24 PE=2 SV=1 Back     alignment and function description
>sp|Q9LRL2|CRR25_ARATH Putative cysteine-rich repeat secretory protein 25 OS=Arabidopsis thaliana GN=CRRSP25 PE=5 SV=2 Back     alignment and function description
>sp|Q9M0X5|CRK25_ARATH Cysteine-rich receptor-like protein kinase 25 OS=Arabidopsis thaliana GN=CRK25 PE=2 SV=1 Back     alignment and function description
>sp|Q9LRK9|CRR28_ARATH Putative cysteine-rich repeat secretory protein 28 OS=Arabidopsis thaliana GN=CRRSP28 PE=5 SV=2 Back     alignment and function description
>sp|Q9SIP6|CRR10_ARATH Putative cysteine-rich repeat secretory protein 10 OS=Arabidopsis thaliana GN=CRRSP10 PE=3 SV=1 Back     alignment and function description
>sp|Q9LRK8|CRR29_ARATH Cysteine-rich repeat secretory protein 29 OS=Arabidopsis thaliana GN=CRRSP29 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query245
224093230242 predicted protein [Populus trichocarpa] 0.979 0.991 0.784 1e-108
224093228242 predicted protein [Populus trichocarpa] 0.979 0.991 0.780 1e-107
255549325240 DUF26 domain-containing protein 2 precur 0.967 0.987 0.773 1e-105
224095758242 predicted protein [Populus trichocarpa] 0.963 0.975 0.766 1e-105
224132594242 predicted protein [Populus trichocarpa] 0.967 0.979 0.756 1e-102
224132974242 predicted protein [Populus trichocarpa] 0.967 0.979 0.743 1e-101
224132966214 predicted protein [Populus trichocarpa] 0.873 1.0 0.775 5e-96
225447358242 PREDICTED: cysteine-rich repeat secretor 0.971 0.983 0.715 1e-94
225447364252 PREDICTED: cysteine-rich repeat secretor 0.902 0.876 0.719 1e-92
297739322266 unnamed protein product [Vitis vinifera] 0.902 0.830 0.719 2e-92
>gi|224093230|ref|XP_002309844.1| predicted protein [Populus trichocarpa] gi|222852747|gb|EEE90294.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  397 bits (1021), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 189/241 (78%), Positives = 207/241 (85%), Gaps = 1/241 (0%)

Query: 5   SIKFASSLYLLIAFAFFLQTAFGVDPLFHFCSSSENFTANGPYETNLNKLIGYLDYQAPP 64
           S  FAS L LL AF+  + T FG DPLFHFCS+ ENFTANGPYE+NLNKL  YL YQAP 
Sbjct: 3   SSNFASFLCLL-AFSLLVHTGFGADPLFHFCSTPENFTANGPYESNLNKLTSYLYYQAPS 61

Query: 65  TGFGKGALGQRPNKAYGLALCRGDVSSSDCKTCIVDASGEIRKRCPYNKAAIIWYDNCLL 124
           TGFG G++GQ P++AYGLALCRGD S+SDCKTC+V+A GEIRKRCPYNKAAIIWYDNCL+
Sbjct: 62  TGFGLGSIGQNPDQAYGLALCRGDASTSDCKTCVVEAGGEIRKRCPYNKAAIIWYDNCLV 121

Query: 125 KYTNTEFFGQIDNKNKFYMWNVRVVTEPVSFNQRTKELLTQLAEKAYVTPKLYAVGEMEL 184
           KY+N  FFGQIDN NKFYMWNV+VV+EPV+FN +TKELLTQLA K   TPKLY  GEMEL
Sbjct: 122 KYSNNGFFGQIDNGNKFYMWNVKVVSEPVTFNGKTKELLTQLANKVEATPKLYETGEMEL 181

Query: 185 GKSNKLYGLTQCTRDLSSVDCKKCLDGIIRELPSCCDGKEGGRVVSGSCNFRYEIYPFVN 244
           G+S KLYGL QCTRDLSS  CKKCLDGII ELPSCCDGKEGGRVVSGSCNFRYEIYPFVN
Sbjct: 182 GESTKLYGLVQCTRDLSSAVCKKCLDGIIGELPSCCDGKEGGRVVSGSCNFRYEIYPFVN 241

Query: 245 A 245
           A
Sbjct: 242 A 242




Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224093228|ref|XP_002309843.1| predicted protein [Populus trichocarpa] gi|222852746|gb|EEE90293.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255549325|ref|XP_002515716.1| DUF26 domain-containing protein 2 precursor, putative [Ricinus communis] gi|223545153|gb|EEF46663.1| DUF26 domain-containing protein 2 precursor, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|224095758|ref|XP_002310467.1| predicted protein [Populus trichocarpa] gi|222853370|gb|EEE90917.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224132594|ref|XP_002327834.1| predicted protein [Populus trichocarpa] gi|222837243|gb|EEE75622.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224132974|ref|XP_002327925.1| predicted protein [Populus trichocarpa] gi|222837334|gb|EEE75713.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224132966|ref|XP_002327923.1| predicted protein [Populus trichocarpa] gi|222837332|gb|EEE75711.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|225447358|ref|XP_002274604.1| PREDICTED: cysteine-rich repeat secretory protein 38-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|225447364|ref|XP_002274745.1| PREDICTED: cysteine-rich repeat secretory protein 38-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|297739322|emb|CBI28973.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query245
TAIR|locus:2095662252 AT3G22060 "AT3G22060" [Arabido 0.865 0.841 0.611 1.8e-71
TAIR|locus:2085470258 AT3G58310 "AT3G58310" [Arabido 0.971 0.922 0.485 1.6e-56
TAIR|locus:2065878255 AT2G31620 "AT2G31620" [Arabido 0.959 0.921 0.406 7.3e-43
TAIR|locus:2115728 675 CRK25 "cysteine-rich RLK (RECE 0.967 0.351 0.379 7.8e-43
TAIR|locus:2095642256 AT3G21990 "AT3G21990" [Arabido 0.865 0.828 0.418 2.5e-42
TAIR|locus:2095582 441 AT3G21960 [Arabidopsis thalian 0.832 0.462 0.425 4.2e-40
TAIR|locus:2095632258 AT3G22050 "AT3G22050" [Arabido 0.853 0.810 0.424 1.1e-37
TAIR|locus:2830202260 AT3G21945 "AT3G21945" [Arabido 0.848 0.8 0.391 5.7e-36
TAIR|locus:2095567263 AT3G22010 "AT3G22010" [Arabido 0.848 0.790 0.405 1.2e-35
TAIR|locus:2121474273 AT4G20680 "AT4G20680" [Arabido 0.865 0.776 0.392 3.1e-35
TAIR|locus:2095662 AT3G22060 "AT3G22060" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 723 (259.6 bits), Expect = 1.8e-71, P = 1.8e-71
 Identities = 132/216 (61%), Positives = 163/216 (75%)

Query:    31 LFHFCSSSE-NFTANGPYETNLNKLIGYLDYQAPPTGFGKGALGQRPNKAYGLALCRGDV 89
             LFH CS  E +FT+   YE+NLN L   L Y+ P TGF   + G  PN   GLALCRGD 
Sbjct:    35 LFHKCSDIEGSFTSKSLYESNLNNLFSQLSYKVPSTGFAASSTGNTPNNVNGLALCRGDA 94

Query:    90 SSSDCKTCIVDASGEIRKRCPYNKAAIIWYDNCLLKYTNTEFFGQIDNKNKFYMWNVRVV 149
             SSSDC++C+  A  E+R+RCP NKA I+WYDNCL+KY++T FFG+ID +N+FY++NV+ V
Sbjct:    95 SSSDCRSCLETAIPELRQRCPNNKAGIVWYDNCLVKYSSTNFFGKIDFENRFYLYNVKNV 154

Query:   150 TEPVSFNQRTKELLTQLAEKAYV--TPKLYAVGEMELGKSNKLYGLTQCTRDLSSVDCKK 207
             ++P +FN +TK LLT+L +KA      KL+A GE  +GK NKLYGL QCTRDL S+ CK 
Sbjct:   155 SDPSTFNSQTKALLTELTKKATTRDNQKLFATGEKNIGK-NKLYGLVQCTRDLKSITCKA 213

Query:   208 CLDGIIRELPSCCDGKEGGRVVSGSCNFRYEIYPFV 243
             CL+GII ELP+CCDGKEGGRVV GSCNFRYEIYPFV
Sbjct:   214 CLNGIIGELPNCCDGKEGGRVVGGSCNFRYEIYPFV 249




GO:0003674 "molecular_function" evidence=ND
GO:0005576 "extracellular region" evidence=ISM
GO:0005773 "vacuole" evidence=IDA
GO:0005618 "cell wall" evidence=IDA
GO:0009737 "response to abscisic acid stimulus" evidence=IEP
GO:0002237 "response to molecule of bacterial origin" evidence=RCA
TAIR|locus:2085470 AT3G58310 "AT3G58310" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2065878 AT2G31620 "AT2G31620" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2115728 CRK25 "cysteine-rich RLK (RECEPTOR-like protein kinase) 25" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2095642 AT3G21990 "AT3G21990" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2095582 AT3G21960 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2095632 AT3G22050 "AT3G22050" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2830202 AT3G21945 "AT3G21945" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2095567 AT3G22010 "AT3G22010" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2121474 AT4G20680 "AT4G20680" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9LRJ9CRR38_ARATHNo assigned EC number0.61110.86530.8412yesno

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query245
pfam01657106 pfam01657, Stress-antifung, Salt stress response/a 9e-28
pfam01657106 pfam01657, Stress-antifung, Salt stress response/a 7e-22
>gnl|CDD|216632 pfam01657, Stress-antifung, Salt stress response/antifungal Back     alignment and domain information
 Score =  101 bits (254), Expect = 9e-28
 Identities = 47/106 (44%), Positives = 63/106 (59%), Gaps = 6/106 (5%)

Query: 32  FHFCSSSEN---FTANGPYETNLNKLIGYLDYQA---PPTGFGKGALGQRPNKAYGLALC 85
           FH CSS+ +    TAN  +E+NLN L+  L   A      GF  G  G  P+  YGLA C
Sbjct: 1   FHLCSSNTSGNYTTANSTFESNLNALLSSLSSNAASSSGKGFAAGTSGAAPDTVYGLAQC 60

Query: 86  RGDVSSSDCKTCIVDASGEIRKRCPYNKAAIIWYDNCLLKYTNTEF 131
           RGD+S+SDC++C+  A  E+R+ CP  K   IWYD+C L+Y +  F
Sbjct: 61  RGDLSASDCRSCLATAVSELRRCCPNKKGGRIWYDSCFLRYESYPF 106


This domain is often found in association with the kinase domains pfam00069 or pfam07714. In many proteins it is duplicated. It contains six conserved cysteines which are involved in disulphide bridges. It has a role in salt stress response and has antifungal activity. Length = 106

>gnl|CDD|216632 pfam01657, Stress-antifung, Salt stress response/antifungal Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 245
PF01657106 Stress-antifung: Salt stress response/antifungal; 99.94
PF01657106 Stress-antifung: Salt stress response/antifungal; 99.93
>PF01657 Stress-antifung: Salt stress response/antifungal; InterPro: IPR002902 This domain is found in plants and has no known function Back     alignment and domain information
Probab=99.94  E-value=4e-27  Score=179.31  Aligned_cols=100  Identities=45%  Similarity=0.980  Sum_probs=77.2

Q ss_pred             cCcCC-C-CCcc-CCCChHHHHHHHHHHHhhhcCCC---CCccccccCCCCCeEEEEEEccCCCCccchhHHHHHHHHHH
Q 025954           32 FHFCS-S-SENF-TANGPYETNLNKLIGYLDYQAPP---TGFGKGALGQRPNKAYGLALCRGDVSSSDCKTCIVDASGEI  105 (245)
Q Consensus        32 ~~~C~-~-~~~~-~~~s~f~~nl~~ll~~L~~~~~~---~~f~~~~~g~~~~~vygl~qCrgD~s~~~C~~C~~~a~~~i  105 (245)
                      |+.|+ + .+++ +++++|++||+.||+.|..+++.   .+|+++..|.++++||||+||++|+++++|+.||+.|..++
T Consensus         1 ~~~Cs~~~~~~~~~~~~~f~~~l~~ll~~l~~~a~~~~~~~f~~~~~~~~~~~vYgl~qC~~Dls~~dC~~Cl~~a~~~~   80 (106)
T PF01657_consen    1 WHFCSSNTNNNYTTDNSTFEQNLNSLLSSLVSNAASSSSKGFATGSAGSGPDTVYGLAQCRGDLSPSDCRACLADAVANI   80 (106)
T ss_dssp             ---E---SSB----TT-THHHHHHHHHHHHHHHGGGTT-TEEEEEE--ST---EEEEEEE-TTS-HHHHHHHHHHHHCCH
T ss_pred             CCcCCCCCCCCcCCCCchHHHHHHHHHHHHHHHHhhccccCcEEeecCCCCCeEEEEEEcCCCCChhhhHHHHHHHHHHH
Confidence            67898 3 3466 57888999999999999999764   48999988889999999999999999999999999999999


Q ss_pred             hhhCCCccceEEEcceeEEEEecccc
Q 025954          106 RKRCPYNKAAIIWYDNCLLKYTNTEF  131 (245)
Q Consensus       106 ~~~C~~~~~a~i~~~~C~lRYs~~~f  131 (245)
                      ++.|+.+++|+||+++|+||||+++|
T Consensus        81 ~~~C~~~~g~~v~~~~C~lRY~~~~F  106 (106)
T PF01657_consen   81 SSCCPGSRGGRVWYDSCFLRYENYPF  106 (106)
T ss_dssp             HHHTTSBSSEEEEESSEEEEEESS--
T ss_pred             HHhCCCCceEEEECCCEEEEEECCCC
Confidence            99999999999999999999999988



The structure of this domain is known and it is thought to be involved in antifungal responses in plants []. Two copies of this domain are also found together in cysteine-rich protein kinases and cysteine-rich repeat secretory proteins. The domain contains four conserved cysteines.; PDB: 3A2E_D.

>PF01657 Stress-antifung: Salt stress response/antifungal; InterPro: IPR002902 This domain is found in plants and has no known function Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query245
3a2e_A108 Crystal Structure Of Ginkbilobin-2, The Novel Antif 9e-05
>pdb|3A2E|A Chain A, Crystal Structure Of Ginkbilobin-2, The Novel Antifungal Protein From Ginkgo Biloba Seeds Length = 108 Back     alignment and structure

Iteration: 1

Score = 43.9 bits (102), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 24/98 (24%), Positives = 39/98 (39%) Query: 145 NVRVVTEPVSFNQRTKELLTQLAEKAYVTPKLYAVGEMELGKSNKLYGLTQCTRDLSSVD 204 N + + FN+ + +L L + + Y G + YG C + +S D Sbjct: 11 NTQKIPSGSPFNRNLRAMLADLRQNTAFSGYDYKTSRAGSGGAPTAYGRATCKQSISQSD 70 Query: 205 CKKCLDGIIRELPSCCDGKEGGRVVSGSCNFRYEIYPF 242 C CL ++ + S C+ G RV C +YE F Sbjct: 71 CTACLSNLVNRIFSICNNAIGARVQLVDCFIQYEQRSF 108

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query245
2e79_A108 Ginkbilobin-2; DUF26 fold, C-X8-C-X2-C motif, lect 2e-28
2e79_A108 Ginkbilobin-2; DUF26 fold, C-X8-C-X2-C motif, lect 3e-26
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 9e-06
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query245
3a2e_A108 Ginkbilobin-2; domain 26 unknown function (DUF26), 99.96
3a2e_A108 Ginkbilobin-2; domain 26 unknown function (DUF26), 99.96
2e79_A108 Ginkbilobin-2; DUF26 fold, C-X8-C-X2-C motif, lect 99.95
2e79_A108 Ginkbilobin-2; DUF26 fold, C-X8-C-X2-C motif, lect 99.95
>3a2e_A Ginkbilobin-2; domain 26 unknown function (DUF26), C-X8-C-X2-C motif, antifungal protein, embryo-abundant protein (EAP), plant protein; 2.38A {Ginkgo biloba} Back     alignment and structure
Probab=99.96  E-value=1.3e-28  Score=187.13  Aligned_cols=105  Identities=23%  Similarity=0.440  Sum_probs=96.2

Q ss_pred             cceEEEeccccccCchhhhHHHHHHHHHHHHHhccCCcceeeeeeecCCCcceEEEEeecCCCChhhhHHHHHHHHhhcc
Q 025954          138 KNKFYMWNVRVVTEPVSFNQRTKELLTQLAEKAYVTPKLYAVGEMELGKSNKLYGLTQCTRDLSSVDCKKCLDGIIRELP  217 (245)
Q Consensus       138 ~~~~~~~n~~n~~~~~~f~~~l~~ll~~l~~~a~~s~~~fa~~~~~~~~~~~vYglaQC~~Dls~~~C~~CL~~a~~~i~  217 (245)
                      .-..+.||.+++++++.|+++|+.||..|+.+++.++.+|+++..+..++++||||+||+||+++++|+.||+.++.+++
T Consensus         4 ~~v~~~Cn~~~~t~~s~f~~nl~~ll~~L~~~a~~s~~~~~t~~~~~~~~~~vygl~qC~~Dls~~~C~~Cl~~a~~~~~   83 (108)
T 3a2e_A            4 AFVSSACNTQKIPSGSPFNRNLRAMLADLRQNTAFSGYDYKTSRAGSGGAPTAYGRATCKQSISQSDCTACLSNLVNRIF   83 (108)
T ss_dssp             CEEEEEECSSBCCTTCTHHHHHHHHHHHHHHHGGGTTSEEEEEECCSTTCCCEEEEEEECTTSCHHHHHHHHHHHHTTHH
T ss_pred             ceeeeecCCCccCCCChHHHHHHHHHHHHHhhCccccCCceEeeccCCCCceEEEEEEEcCCCCHHHHHHHHHHHHHHHH
Confidence            34567899999999999999999999999999887777888877665467899999999999999999999999999999


Q ss_pred             ccCCCCcceEEEcCCeeEEEecCCC
Q 025954          218 SCCDGKEGGRVVSGSCNFRYEIYPF  242 (245)
Q Consensus       218 ~~c~~~~g~~v~~~~C~lRY~~~~F  242 (245)
                      ++||+++||+||+++|+||||+++|
T Consensus        84 ~~C~~~~g~~i~~~~C~lRY~~~~F  108 (108)
T 3a2e_A           84 SICNNAIGARVQLVDCFIQYEQRSF  108 (108)
T ss_dssp             HHTTSBSSEEEEETTEEEEEESSCC
T ss_pred             HHCCCCceEEEECCCEEEEEeCCcC
Confidence            9999999999999999999999998



>3a2e_A Ginkbilobin-2; domain 26 unknown function (DUF26), C-X8-C-X2-C motif, antifungal protein, embryo-abundant protein (EAP), plant protein; 2.38A {Ginkgo biloba} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00