Citrus Sinensis ID: 025959

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-----
Protein Sequence
MAAASASHILLTLAPLVLLLVLPQIQAQAPAPAGPVNLTGILDKNGQFTTFIKLLISTQVANQIQSQINSSSEGMTVFAPTDNAFNNLEKGLLNNLDNQKQVQLVLYHVTSKFYRQSDLLLVSNPVRTLASGQDVWGLNFTGQGNQVNVSSGVVETPINSVLRQNFPLAVYQVDKVLLPEELSAAKSPSAAPAPEGKKPTEGSNKKVPAASEPAPADDKTGAGGRLNAGLGFVVGLALLCMGVLS
Secondary Structure (PSIPRED)
cccHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHccccHHHHHHHHHccHHHHHHHHHccccccEEEEccccHHHHcccHHHHHcccHHHHHHHHHccEEccccccHHHHHcccccccccccccEEEEEEEEEccEEEEccccEEcccccEEEccccEEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHccc
Secondary Structure Prediction (SSPRO)
cccccHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHcccHHHHHHHHHHccHHHHHHHHHccccccEEEEccccHHHHHccccccccccHHHHHHHHHHHccccEccHHHccccccccEEEccccccEEEEEEEcccEEEEEccEEEEEEEEEEEccccEEEEEEccEEccHHHccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHc
Coil and Loop (DISEMBL)
MAAASASHILLTLAPLVLLLVLpqiqaqapapagpvnltgildkngqFTTFIKLLISTQVANQIQSQinsssegmtvfaptdnaFNNLEKGllnnldnqkQVQLVLYHVTSkfyrqsdlllvsnpvrtlasgqdvwglnftgqgnqvnvssgvvetpinsvlrqnfplavyqvdkvllpeelsaakspsaapapegkkptegsnkkvpaasepapaddktgaggrlnaGLGFVVGLALLCMGVLS
Flexible Loop (DISEMBL)
MAAASASHILLTLAPLVLLLVLPQIQAQAPAPAGPVNLTGILDKNGQFTTFIKLLISTQVANQIQSQINSSSEGMTVFAPTDNAFNNLEKGLLNNLDNQKQVQLVLYHVTSKFYRQSDLLLVSNPVRTLASGQDVWGLNFTGQGNQVNVSSGVVETPINSVLRQNFPLAVYQVDKVLLPEELSAakspsaapapegkkptegsnkkvpaasepapaddkTGAGGRLNAGLGFVVGLALLCMGVLS
Low Complexity Region (SEG)
MAAASASHIlltlaplvlllvlpqiqaqapapagpvNLTGILDKNGQFTTFIKLLISTQVAnqiqsqinsssEGMTVFAPTDNAFNNLEKGLLNNLDNQKQVQLVLYHVTSKFYRQSDLLLVSNPVRTLASGQDVWGLNFTGQGNQVNVSSGVVETPINSVLRQNFPLAVYQVDKVLLpeelsaakspsaapapegkkpTEGSNKKVPAASEPAPADDKTGAGGRlnaglgfvvglallCMGVLS
Disordered region (IsUnstruct)
*************************************LTGILDKNGQFTTFIKLLISTQVANQIQ**********TVFAPTDNAFNNLEKGLLNNLDNQKQVQLVLYHVTSKFYRQSDLLLVSNPVRTLASGQDVWGLNFTGQGNQVNVSSGVVETPINSVLRQNFPLAVYQVDKVLL**********************************************RLNAGLGFVVGLALLCMGV**
Disordered Region (DISOPRED)
******S**LLTLAPLVLLLVL*************VNLTGILDKNGQFTTFIKLLISTQVANQIQSQINSSSEGMTVFAPTDNAFNNLEKGLLNNLDNQKQVQLVLYHVTSKFYRQSDLLLVSNPVRT*ASGQDVWGLNFTGQGNQVNVSSGVVETPINSVLRQNFPLAVYQVDKVLLPE************************************************GLGFVVGLALLCMGVLS
Disordered Region (DISEMBL)
MAAASASHILLTLAPLVLLLVLPQIQAQAPAPAGPVNLTGILDKNGQFTTFIKLLISTQVANQIQSQINSSSEGMTVFAPTDNAFNNLEKGLLNNLDNQKQVQLVLYHVTSKFYRQSDLLLVSNPVRTLASGQDVWGLNFTGQGNQVNVSSGVVETPINSVLRQNFPLAVYQVDKVLLPEELS************************************TGAGGRLNAGLGFVVGLALLCMGVLS
Disordered Region (DISPRO)
***ASASHILLTLAPLVLLLVLP**********GPVNLTGILDKNGQFTTFIKLLISTQVANQIQSQINSSSEGMTVFAPTDNAFNNLEKGLLNNLDNQKQVQLVLYHVTSKFYRQSDLLLVSNPVRTLASGQDVWGLNFTGQGNQVNVSSGVVETPINSVLRQNFPLAVYQVDKVLLPEELSAAK***************************************LNAGLGFVVGLALLCMGVLS
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHi
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAAASASHILLTLAPLVLLLVLPQIQAQAPAPAGPVNLTGILDKNGQFTTFIKLLISTQVANQIQSQINSSSEGMTVFAPTDNAFNNLEKGLLNNLDNQKQVQLVLYHVTSKFYRQSDLLLVSNPVRTLASGQDVWGLNFTGQGNQVNVSSGVVETPINSVLRQNFPLAVYQVDKVLLPEELSAAKSPSAAPAPEGKKPTEGSNKKVPAASEPAPADDKTGAGGRLNAGLGFVVGLALLCMGVLS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	245	2.2.26 [Sep-21-2011]
Q9SIL7	247	Fasciclin-like arabinogal	yes	no	0.951	0.943	0.525	1e-60
Q9ZWA8	247	Fasciclin-like arabinogal	no	no	0.824	0.817	0.574	1e-55
Q9FFH6	247	Fasciclin-like arabinogal	no	no	0.848	0.842	0.563	4e-54
Q8LEJ6	246	Fasciclin-like arabinogal	no	no	0.783	0.780	0.489	2e-39
Q8LEE9	249	Fasciclin-like arabinogal	no	no	0.604	0.594	0.473	7e-31
Q9SJ81	254	Fasciclin-like arabinogal	no	no	0.591	0.570	0.402	1e-20
Q9LZX4	422	Fasciclin-like arabinogal	no	no	0.677	0.393	0.354	2e-17
Q9SNC3	420	Fasciclin-like arabinogal	no	no	0.689	0.402	0.325	1e-13
O22126	420	Fasciclin-like arabinogal	no	no	0.612	0.357	0.333	2e-13
Q9SU13	403	Fasciclin-like arabinogal	no	no	0.889	0.540	0.285	2e-11

>sp|Q9SIL7|FLA6_ARATH Fasciclin-like arabinogalactan protein 6 OS=Arabidopsis thaliana GN=FLA6 PE=2 SV=2

 Score =  233 bits (594), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 134/255 (52%), Positives = 169/255 (66%), Gaps = 22/255 (8%)

Query: 1   MAAASASHILLTLAPLVLLLVLPQIQAQAPAPA-----GPVNLTGILDKNGQFTTFIKLL 55
           M+++  S+++L    L+ L  +P IQ+Q  APA      P+NLT IL+   QFTT I+LL
Sbjct: 1   MSSSLFSYVVL----LIFLFTIPYIQSQPTAPAPTTEKSPINLTAILEAGHQFTTLIQLL 56

Query: 56  ISTQVANQIQSQINSSSEGMTVFAPTDNAFNNLEKGLLNNLDNQKQVQLVLYHVTSKFYR 115
            +TQV  Q+  Q+NSS +GMT+FAPTDNAFN L+ G LN+L  Q+Q+QL+LYH+  K+Y 
Sbjct: 57  NTTQVGFQVSVQLNSSDQGMTIFAPTDNAFNKLKPGTLNSLTYQQQIQLMLYHIIPKYYS 116

Query: 116 QSDLLLVSNPVRTLASGQD--VWGLNFTGQG--NQVNVSSGVVETPINSVLRQNFPLAVY 171
            SDLLL SNPVRT A+GQD  V+GLNFTGQ   NQVNVS+GVVET IN+ LRQ FPLAVY
Sbjct: 117 LSDLLLASNPVRTQATGQDGGVFGLNFTGQAQSNQVNVSTGVVETRINNALRQQFPLAVY 176

Query: 172 QVDKVLLPEELSAAK-SPSAAPAPEGKKPTEGSNKKVPAASEPAPADDKTGAGGRL-NAG 229
            VD VLLPEEL   K +P+ APAP+       S+     A  PA  D+   AG  +    
Sbjct: 177 VVDSVLLPEELFGTKTTPTGAPAPK-------SSTSSSDADSPAADDEHKSAGSSVKRTS 229

Query: 230 LGFVVGLALLCMGVL 244
           LG VV  AL C  V+
Sbjct: 230 LGIVVSFALFCCSVI 244

May be a cell surface adhesion protein.
Arabidopsis thaliana (taxid: 3702)

>sp|Q9ZWA8|FLA9_ARATH Fasciclin-like arabinogalactan protein 9 OS=Arabidopsis thaliana GN=FLA9 PE=1 SV=1

 Score =  216 bits (549), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 124/216 (57%), Positives = 150/216 (69%), Gaps = 14/216 (6%)

Query: 36  VNLTGILDKNGQFTTFIKLLISTQVANQIQSQINSSSEGMTVFAPTDNAFNNLEKGLLNN 95
           +NLT IL+K GQFTTFI LL  TQV +Q+  Q+NSSSEGMTVFAPTDNAF NL+ G LN 
Sbjct: 38  INLTAILEKGGQFTTFIHLLNITQVGSQVNIQVNSSSEGMTVFAPTDNAFQNLKPGTLNQ 97

Query: 96  LDNQKQVQLVLYHVTSKFYRQSDLLLVSNPVRTLASGQD--VWGLNFTGQGNQVNVSSGV 153
           L    QV+L+LYHV+ K+Y   DLL VSNPVRT ASG+D  V+GLNFTGQ NQ+NVS+G 
Sbjct: 98  LSPDDQVKLILYHVSPKYYSMDDLLSVSNPVRTQASGRDNGVYGLNFTGQTNQINVSTGY 157

Query: 154 VETPINSVLRQNFPLAVYQVDKVLLPEELSAAKSPS-AAPAPEGKK----PTEGSNKKVP 208
           VET I++ LRQ  PLAVY VD VLLP E+      S  APAP+ K        GS KK  
Sbjct: 158 VETRISNSLRQQRPLAVYVVDMVLLPGEMFGEHKLSPIAPAPKSKSGGVTDDSGSTKK-- 215

Query: 209 AASEPAPADDKTGAGGRLNAGLGFVVGLALLCMGVL 244
            A+ P+   DK+G+G +   GLGF +GL +LC+  L
Sbjct: 216 -AASPS---DKSGSGEK-KVGLGFGLGLIVLCLKFL 246

May be a cell surface adhesion protein.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FFH6|FLA13_ARATH Fasciclin-like arabinogalactan protein 13 OS=Arabidopsis thaliana GN=FLA13 PE=1 SV=1

 Score =  211 bits (536), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 120/213 (56%), Positives = 149/213 (69%), Gaps = 5/213 (2%)

Query: 36  VNLTGILDKNGQFTTFIKLLISTQVANQIQSQINSSSEGMTVFAPTDNAFNNLEKGLLNN 95
           +N+T IL+K GQF T I+LL +TQ+ NQI  QINSSSEGMTV APTDNAF NL+ G LN 
Sbjct: 35  INITAILEKGGQFVTLIRLLNTTQIGNQINIQINSSSEGMTVLAPTDNAFQNLKPGTLNK 94

Query: 96  LDNQKQVQLVLYHVTSKFYRQSDLLLVSNPVRTLASGQD---VWGLNFTGQGNQVNVSSG 152
           L    QV+L+LYHV+ KFY   DLL VSNPVRT ASG+D   V+GLNFTGQGNQVNVS+G
Sbjct: 95  LSPDDQVKLILYHVSPKFYTLEDLLSVSNPVRTQASGRDVGGVYGLNFTGQGNQVNVSTG 154

Query: 153 VVETPINSVLRQNFPLAVYQVDKVLLPEELSAAKSPS-AAPAPEGKKPTEGSNKKVPAAS 211
           VVET +++ LRQ  PLAVY VD VLLPEE+   +  S  AP P+ K P + S+    +  
Sbjct: 155 VVETRLSTSLRQERPLAVYVVDMVLLPEEMFGERKISPMAPPPKSKSP-DVSDDSESSKK 213

Query: 212 EPAPADDKTGAGGRLNAGLGFVVGLALLCMGVL 244
             AP++ +    G +N GLG  +GL +LC+  L
Sbjct: 214 AAAPSESEKSGSGEMNTGLGLGLGLVVLCLKFL 246

May be a cell surface adhesion protein.

Arabidopsis thaliana (taxid: 3702)

>sp|Q8LEJ6|FLA11_ARATH Fasciclin-like arabinogalactan protein 11 OS=Arabidopsis thaliana GN=FLA11 PE=2 SV=2

 Score =  162 bits (410), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 96/196 (48%), Positives = 129/196 (65%), Gaps = 4/196 (2%)

Query: 3   AASASHILLTLAPLVLLLVLPQIQAQAPAPAGPVNLTGILDKNGQFTTFIKLLISTQVAN 62
           A S + I   L    L++     QA AP P+GP N+T IL+K GQFT FI+LL STQ ++
Sbjct: 2   ATSRTFIFSNLFIFFLVIATTYGQAPAPGPSGPTNITAILEKAGQFTLFIRLLKSTQASD 61

Query: 63  QIQSQINSSSE-GMTVFAPTDNAFNNLEKGLLNNLDNQKQVQLVLYHVTSKFYRQSDLLL 121
           QI +Q+NSSS  G+TVFAPTDNAFN+L+ G LN+L +Q++VQLV +HV            
Sbjct: 62  QINTQLNSSSSNGLTVFAPTDNAFNSLKSGTLNSLSDQQKVQLVQFHVLPTLITMPQFQT 121

Query: 122 VSNPVRTLA-SGQD-VWGLNFTGQGNQVNVSSGVVETPINSVLRQNFPLAVYQVDKVLLP 179
           VSNP+RT A  GQ+  + LN T  GNQVN+++GVV   + + +  +  LAVYQVD+VLLP
Sbjct: 122 VSNPLRTQAGDGQNGKFPLNITSSGNQVNITTGVVSATVANSVYSDKQLAVYQVDQVLLP 181

Query: 180 EELSAAKSPSAAPAPE 195
             +  + S + APAPE
Sbjct: 182 LAMFGS-SVAPAPAPE 196

May be a cell surface adhesion protein.

Arabidopsis thaliana (taxid: 3702)

>sp|Q8LEE9|FLA12_ARATH Fasciclin-like arabinogalactan protein 12 OS=Arabidopsis thaliana GN=FLA12 PE=2 SV=2

 Score =  134 bits (337), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 71/150 (47%), Positives = 104/150 (69%), Gaps = 2/150 (1%)

Query: 35  PVNLTGILDKNGQFTTFIKLLISTQVANQIQSQINSSSEGMTVFAPTDNAFNNLEKGLLN 94
           P N+T IL+K GQFT FI+LL ST VANQ+  Q+N+S  G+T+FAP+D++F  L+ G LN
Sbjct: 37  PTNVTKILEKAGQFTVFIRLLKSTGVANQLYGQLNNSDNGITIFAPSDSSFTGLKAGTLN 96

Query: 95  NLDNQKQVQLVLYHVTSKFYRQSDLLLVSNPVRTLA--SGQDVWGLNFTGQGNQVNVSSG 152
           +L +++QV+L+ +HV   +   S+   +SNP+RT A  S    + LN T  GN VN++SG
Sbjct: 97  SLTDEQQVELIQFHVIPSYVSSSNFQTISNPLRTQAGDSADGHFPLNVTTSGNTVNITSG 156

Query: 153 VVETPINSVLRQNFPLAVYQVDKVLLPEEL 182
           V  T ++  +  +  LAVYQVDKVLLP+++
Sbjct: 157 VTNTTVSGNVYSDGQLAVYQVDKVLLPQQV 186

May be a cell surface adhesion protein.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SJ81|FLA7_ARATH Fasciclin-like arabinogalactan protein 7 OS=Arabidopsis thaliana GN=FLA7 PE=1 SV=1

 Score =  100 bits (249), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 60/149 (40%), Positives = 84/149 (56%), Gaps = 4/149 (2%)

Query: 36  VNLTGILDKNGQFTTFIKLLISTQVANQIQSQINSSSEGMTVFAPTDNAFNNLEKGLLNN 95
           VNLT +L   G F TF+  L+ST V    Q+Q N++ EG+T+F P D+AF   +   L+N
Sbjct: 45  VNLTELLSVAGPFHTFLDYLLSTGVIETFQNQANNTEEGITIFVPKDDAFKAQKNPPLSN 104

Query: 96  LDNQKQVQLVLYHVTSKFYRQSDL--LLVSNPVRTLASGQDVWGLNFTGQGNQVNVSSGV 153
           L   +  QLVL+H    +Y  S+   L  S PV T A GQ  + L FT     V + S  
Sbjct: 105 LTKDQLKQLVLFHALPHYYSLSEFKNLSQSGPVSTFAGGQ--YSLKFTDVSGTVRIDSLW 162

Query: 154 VETPINSVLRQNFPLAVYQVDKVLLPEEL 182
             T ++S +    P+AVYQV++VLLPE +
Sbjct: 163 TRTKVSSSVFSTDPVAVYQVNRVLLPEAI 191

May be a cell surface adhesion protein.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LZX4|FLA10_ARATH Fasciclin-like arabinogalactan protein 10 OS=Arabidopsis thaliana GN=FLA10 PE=1 SV=1

 Score = 89.7 bits (221), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 61/172 (35%), Positives = 94/172 (54%), Gaps = 6/172 (3%)

Query: 25  IQAQAPAPAGPVNLTGILDKNGQFTTFIKLLISTQVANQIQSQINSSSEGMTVFAPTDNA 84
           + A AP+ AG  N+TG+L+K G   TF  LL+S+ V    +S +    +G+TVFAP+D A
Sbjct: 178 LTAPAPSSAGVSNITGLLEKAG-CKTFANLLVSSGVIKTFESTVE---KGLTVFAPSDEA 233

Query: 85  FNNLEKGLLNNLDNQKQVQLVLYHVTSKFYRQSDLLLVSNPVRTLAS-GQDVWGLNFTGQ 143
           F       L NL   + V L+ YH  +++  +  L    + + TLA+ G   + L  +  
Sbjct: 234 FKARGVPDLTNLTQAEVVSLLEYHALAEYKPKGSLKTNKDAISTLATNGAGKYDLTTSTS 293

Query: 144 GNQVNVSSGVVETPINSVLRQNFPLAVYQVDKVLLPEELSAAKSPSAAPAPE 195
           G++V + +GV  + +   +    P+ ++ VD VLLP EL   KS S APAPE
Sbjct: 294 GDEVILHTGVGPSRLADTVVDETPVVIFTVDNVLLPAEL-FGKSSSPAPAPE 344

May be a cell surface adhesion protein.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SNC3|FLA4_ARATH Fasciclin-like arabinogalactan protein 4 OS=Arabidopsis thaliana GN=FLA4 PE=1 SV=1

 Score = 76.6 bits (187), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 58/178 (32%), Positives = 96/178 (53%), Gaps = 9/178 (5%)

Query: 23  PQIQAQAPAPAGPVNLTGILDKNGQFTTFIKLLISTQVANQIQSQINSSSEGMTVFAPTD 82
           P   + +P PAG +NLT IL     F   + LL+++ V  + ++  +    G+TVF PTD
Sbjct: 194 PTSTSLSPPPAG-INLTQILINGHNFNVALSLLVASGVITEFEN--DERGAGITVFVPTD 250

Query: 83  NAFNNLEKGL-LNNLDNQKQVQLVLYHVTSKFYRQSDLLLVSNPVR-TLAS---GQDVWG 137
           +AF++L   + L +L  +++  ++ +HV   +Y    L  ++NPV+ TLA+   G   + 
Sbjct: 251 SAFSDLPSNVNLQSLPAEQKAFVLKFHVLHSYYTLGSLESITNPVQPTLATEEMGAGSYT 310

Query: 138 LNFTG-QGNQVNVSSGVVETPINSVLRQNFPLAVYQVDKVLLPEELSAAKSPSAAPAP 194
           LN +   G+ V ++SGVV   +        P++V+ V KVLLP+EL        A AP
Sbjct: 311 LNISRVNGSIVTINSGVVLAVVTQTAFDQNPVSVFGVSKVLLPKELFPKSGQPVATAP 368

May be a cell surface adhesion protein that is required for normal cell expansion.

Arabidopsis thaliana (taxid: 3702)

>sp|O22126|FLA8_ARATH Fasciclin-like arabinogalactan protein 8 OS=Arabidopsis thaliana GN=FLA8 PE=1 SV=1

 Score = 76.3 bits (186), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 52/156 (33%), Positives = 84/156 (53%), Gaps = 6/156 (3%)

Query: 29  APAPAGPV-NLTGILDKNGQFTTFIKLLISTQVANQIQSQINSSSEGMTVFAPTDNAFNN 87
           APAP+  + N+TG+L+K G   TF  LL+S+ V    +S +    +G+TVFAP+D AF  
Sbjct: 180 APAPSASLSNITGLLEKAG-CKTFANLLVSSGVLKTYESAVE---KGLTVFAPSDEAFKA 235

Query: 88  LEKGLLNNLDNQKQVQLVLYHVTSKFYRQSDLLLVSNPVRTLAS-GQDVWGLNFTGQGNQ 146
                L  L   + V L+ YH  +++  +  L    N + TLA+ G   + L  +  G++
Sbjct: 236 EGVPDLTKLTQAEVVSLLEYHALAEYKPKGSLKTNKNNISTLATNGAGKFDLTTSTSGDE 295

Query: 147 VNVSSGVVETPINSVLRQNFPLAVYQVDKVLLPEEL 182
           V + +GV  + +   +    P+ ++ VD VLLP EL
Sbjct: 296 VILHTGVAPSRLADTVLDATPVVIFTVDNVLLPAEL 331

May be a cell surface adhesion protein.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SU13|FLA2_ARATH Fasciclin-like arabinogalactan protein 2 OS=Arabidopsis thaliana GN=FLA2 PE=1 SV=1

 Score = 69.3 bits (168), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 67/235 (28%), Positives = 101/235 (42%), Gaps = 17/235 (7%)

Query: 19  LLVLPQIQAQAPAPAGPVNLTGILDKNGQFTTFIKLLISTQVANQIQSQINSSSEGMTVF 78
           +L  P+ +A   +P+  + LT IL+K G    F  +L ST      Q  ++    G+TVF
Sbjct: 173 VLTSPEAEAPTASPSDLI-LTTILEKQG-CKAFSDILKSTGADKTFQDTVDG---GLTVF 227

Query: 79  APTDNAFNNLEKGLLNNLDNQKQVQLVLYHVTSKFYRQSDLLLVSN-PVRTLAS-GQDVW 136
            P+D+A          +L    +  LVLYH     Y+   +L   N  V TLA+ G + +
Sbjct: 228 CPSDSAVGKFMPKF-KSLSPANKTALVLYH-GMPVYQSLQMLRSGNGAVNTLATEGNNKF 285

Query: 137 GLNFTGQGNQVNVSSGVVETPINSVLRQNFPLAVYQVDKVLLPEELSAA-------KSPS 189
                  G  V + + VV   +   L+   PL VY++DKVLLP E+  A          S
Sbjct: 286 DFTVQNDGEDVTLETDVVTAKVMGTLKDQEPLIVYKIDKVLLPREIYKAVKTSAPAPKSS 345

Query: 190 AAPAPEGKKPTEGSNKKVPAASEPAPADDKTGA-GGRLNAGLGFVVGLALLCMGV 243
                  +   +G +   P+  +   ADDK GA    +      V  +  LC GV
Sbjct: 346 KKKPKNAEADADGPSADAPSDDDVEVADDKNGAVSAMITRTSNVVTAIVGLCFGV 400

May be a cell surface adhesion protein.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	245
150416583	244	fasciclin-like arabinogalactan protein 1	0.979	0.983	0.618	4e-70
255553599	246	conserved hypothetical protein [Ricinus	0.865	0.861	0.660	7e-70
157273642	244	fasciclin-like arabinogalactan protein 4	0.979	0.983	0.610	5e-69
225446471	251	PREDICTED: fasciclin-like arabinogalacta	0.918	0.896	0.597	7e-62
147854336	251	hypothetical protein VITISV_000403 [Viti	0.918	0.896	0.593	1e-60
351724977	250	uncharacterized protein LOC100527846 pre	0.902	0.884	0.561	2e-59
18399381	247	fasciclin-like arabinogalactan protein 6	0.951	0.943	0.525	6e-59
388506782	249	unknown [Medicago truncatula]	0.889	0.875	0.549	1e-58
388502746	249	unknown [Medicago truncatula]	0.889	0.875	0.545	1e-57
24417458	247	unknown [Arabidopsis thaliana]	0.873	0.866	0.574	2e-57

>gi|150416583|gb|ABR68799.1| fasciclin-like arabinogalactan protein 1 [Gossypium hirsutum]

 Score =  270 bits (690), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 154/249 (61%), Positives = 187/249 (75%), Gaps = 9/249 (3%)

Query: 1   MAAASA-SHILLTLAPLVLLLVLPQIQAQAPAPAGPVNLTGILDKNGQFTTFIKLLISTQ 59
           MA++S  S ILL+L  LV +  +    A APAP+GP+N TGILDKNGQ+T F++LL  TQ
Sbjct: 1   MASSSPLSPILLSLF-LVFICGVSAQTAPAPAPSGPLNFTGILDKNGQYTYFLQLLAQTQ 59

Query: 60  VANQIQSQINSSSEGMTVFAPTDNAFNNLEKGLLNNLDNQKQVQLVLYHVTSKFYRQSDL 119
           V +Q+Q+Q+ +++EG TVFAPTDNAFNNL+ G +NNLD Q++VQLVLYHV  K+Y  +DL
Sbjct: 60  VGSQVQTQLKTTTEGFTVFAPTDNAFNNLKPGTVNNLDPQQKVQLVLYHVIPKYYSLNDL 119

Query: 120 LLVSNPVRTLASGQDVWGLNFTGQGNQVNVSSGVVETPINSVLRQNFPLAVYQVDKVLLP 179
             VSNPVRT A GQD +GLN TG  NQVNVSSGVVET IN+ L Q  PLA+YQ DKVLLP
Sbjct: 120 QFVSNPVRTQA-GQD-FGLNVTGLNNQVNVSSGVVETQINNALYQKKPLAIYQADKVLLP 177

Query: 180 EELSAAKSPSAAPAPEGKKPTEG--SNKKVPA-ASEPAPADDKTGAGGRLNAGLGFVVGL 236
           EE   AKSP+AAP+P  KK + G  SN +  A A EPA AD+ +G+ GR N GLGFVVGL
Sbjct: 178 EEFFEAKSPAAAPSPATKKSSTGSKSNSRASATADEPASADN-SGSAGR-NMGLGFVVGL 235

Query: 237 ALLCMGVLS 245
           AL CMG LS
Sbjct: 236 ALACMGFLS 244

Source: Gossypium hirsutum

Species: Gossypium hirsutum

Genus: Gossypium

Family: Malvaceae

Order: Malvales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255553599|ref|XP_002517840.1| conserved hypothetical protein [Ricinus communis] gi|223542822|gb|EEF44358.1| conserved hypothetical protein [Ricinus communis]

 Score =  269 bits (688), Expect = 7e-70,   Method: Compositional matrix adjust.
 Identities = 142/215 (66%), Positives = 172/215 (80%), Gaps = 3/215 (1%)

Query: 33  AGPVNLTGILDKNGQFTTFIKLLISTQVANQIQSQINSSSEGMTVFAPTDNAFNNLEKGL 92
           +GP+N+TGILDKNGQFTTFI+LL STQVA Q+++Q+NS++EG TVFAPTDNAFNNL+ G 
Sbjct: 33  SGPLNVTGILDKNGQFTTFIRLLTSTQVATQLENQLNSTTEGFTVFAPTDNAFNNLKAGT 92

Query: 93  LNNLDNQKQVQLVLYHVTSKFYRQSDLLLVSNPVRTLASGQD--VWGLNFTGQGNQVNVS 150
           LN+L  Q+QVQLVL H+T KFY  S+LLLV NPVRT A+GQD  V+GLNFTGQ NQVNVS
Sbjct: 93  LNDLSTQQQVQLVLAHITPKFYTLSNLLLVPNPVRTQATGQDGGVFGLNFTGQANQVNVS 152

Query: 151 SGVVETPINSVLRQNFPLAVYQVDKVLLPEELSAAKSPSAAPAPEGKKPTEGSNKKVPAA 210
           +G+VET IN+ +RQ FPLA+YQVDKVLLPEEL   K P+A+PAP  K  + GS+K    A
Sbjct: 153 TGIVETQINNAIRQQFPLALYQVDKVLLPEELFGVKPPTASPAPPAKTSSGGSSKNDTVA 212

Query: 211 SEPAPADDKTGAGGRLNAGLGFVVGLALLCMGVLS 245
           SEP+ +D  T  G R N  LGFV+GL L CMGV+S
Sbjct: 213 SEPS-SDKGTSGGVRTNVALGFVIGLGLACMGVIS 246

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|157273642|gb|ABV27475.1| fasciclin-like arabinogalactan protein 4 [Gossypium hirsutum]

 Score =  266 bits (680), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 152/249 (61%), Positives = 187/249 (75%), Gaps = 9/249 (3%)

Query: 1   MAAASA-SHILLTLAPLVLLLVLPQIQAQAPAPAGPVNLTGILDKNGQFTTFIKLLISTQ 59
           MA++S  S ILL+L  LV +  +    A APAP+GP+N TGILDKNGQ+T F++LL  TQ
Sbjct: 1   MASSSPLSPILLSLF-LVFICGVSAQTAPAPAPSGPLNFTGILDKNGQYTYFLQLLAQTQ 59

Query: 60  VANQIQSQINSSSEGMTVFAPTDNAFNNLEKGLLNNLDNQKQVQLVLYHVTSKFYRQSDL 119
           V +Q+Q+Q+ +++EG TVFAPTDNAFNNL+ G +NNLD Q++VQLVLYHV  K+Y  +DL
Sbjct: 60  VGSQVQTQLKTTTEGFTVFAPTDNAFNNLKPGTVNNLDPQQKVQLVLYHVIPKYYSLNDL 119

Query: 120 LLVSNPVRTLASGQDVWGLNFTGQGNQVNVSSGVVETPINSVLRQNFPLAVYQVDKVLLP 179
             VSNPVRT A G+D +GLN TG  NQVNVSSGVVET IN+ L Q  PLA+YQ DKVLLP
Sbjct: 120 QFVSNPVRTQA-GED-FGLNVTGLNNQVNVSSGVVETQINNALYQKKPLAIYQADKVLLP 177

Query: 180 EELSAAKSPSAAPAPEGKKPTEG--SNKKVPA-ASEPAPADDKTGAGGRLNAGLGFVVGL 236
           EE   AKSP+AAP+P  KK + G  SN +  A A EPA AD+ +G+ GR N GLGFVVGL
Sbjct: 178 EEFFEAKSPAAAPSPATKKSSTGSKSNSRASATADEPASADN-SGSTGR-NMGLGFVVGL 235

Query: 237 ALLCMGVLS 245
           AL C+G LS
Sbjct: 236 ALACIGFLS 244

Source: Gossypium hirsutum

Species: Gossypium hirsutum

Genus: Gossypium

Family: Malvaceae

Order: Malvales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225446471|ref|XP_002277788.1| PREDICTED: fasciclin-like arabinogalactan protein 9 isoform 1 [Vitis vinifera] gi|359485235|ref|XP_003633241.1| PREDICTED: fasciclin-like arabinogalactan protein 9 isoform 2 [Vitis vinifera] gi|302143350|emb|CBI21911.3| unnamed protein product [Vitis vinifera]

 Score =  243 bits (619), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 141/236 (59%), Positives = 173/236 (73%), Gaps = 11/236 (4%)

Query: 18  LLLVLPQIQAQAPAPAGP----VNLTGILDKNGQFTTFIKLLISTQVANQIQSQINSSSE 73
           LL + P  QAQ P+   P    +NLTGILDKNGQF TFI+LL +TQ+ +QI++Q+ SS+E
Sbjct: 17  LLALSPYAQAQKPSAPAPSPSHLNLTGILDKNGQFKTFIRLLATTQIGDQIKNQLKSSTE 76

Query: 74  GMTVFAPTDNAFNNLEKGLLNNLDNQKQVQLVLYHVTSKFYRQSDLLLVSNPVRTLASGQ 133
           GMTVFAPTDNAF+NL+ G LN L +Q+QVQL+LYHV SKFY    LL VSNPVRT A+GQ
Sbjct: 77  GMTVFAPTDNAFSNLKPGTLNALSDQEQVQLILYHVLSKFYSLETLLTVSNPVRTQATGQ 136

Query: 134 D--VWGLNFTGQGNQVNVSSGVVETPINSVLRQNFPLAVYQVDKVLLPEELSAAKSPSAA 191
           D  ++GLNFTG+GNQVNVS+G++ET +N+VLR   PLAVYQVDKVLLP EL  AK P+  
Sbjct: 137 DGGIFGLNFTGEGNQVNVSTGIIETQVNNVLRGESPLAVYQVDKVLLPLELFGAKPPALP 196

Query: 192 PAPEGKKPTEGSNKKVPAASEPAPADDK---TGAGGRLNAGLGFVVGLALLCMGVL 244
           P P  K P+  +N  V A    A A +K   +G+GGR N G GF VGL L+CMG L
Sbjct: 197 PPPA-KAPSSATNATVIAEEPSASASEKSDPSGSGGR-NVGYGFAVGLGLMCMGAL 250

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147854336|emb|CAN83422.1| hypothetical protein VITISV_000403 [Vitis vinifera]

 Score =  238 bits (608), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 140/236 (59%), Positives = 171/236 (72%), Gaps = 11/236 (4%)

Query: 18  LLLVLPQIQAQAPAPAGP----VNLTGILDKNGQFTTFIKLLISTQVANQIQSQINSSSE 73
           LL + P  QAQ P+   P    +NLTGILDKNGQF TFI+LL +TQ+ +QI++Q+ SS+E
Sbjct: 17  LLALSPYAQAQKPSAPAPSPSHLNLTGILDKNGQFKTFIRLLATTQIGDQIKNQLKSSTE 76

Query: 74  GMTVFAPTDNAFNNLEKGLLNNLDNQKQVQLVLYHVTSKFYRQSDLLLVSNPVRTLASGQ 133
           GMTVFAPTDNAF+NL+ G LN L +Q+QVQL+LYHV SKFY    LL VSNPVRT A+GQ
Sbjct: 77  GMTVFAPTDNAFSNLKPGTLNALSDQEQVQLILYHVLSKFYSLETLLTVSNPVRTQATGQ 136

Query: 134 D--VWGLNFTGQGNQVNVSSGVVETPINSVLRQNFPLAVYQVDKVLLPEELSAAKSPSAA 191
           D  ++GLNFTG+GNQVNVS+G++ET +N+VLR   PLAVYQVDKVLLP EL  AK P+  
Sbjct: 137 DGGIFGLNFTGEGNQVNVSTGIIETQVNNVLRGESPLAVYQVDKVLLPLELFGAKPPALP 196

Query: 192 PAPEGKKPTEGSNKKVPAASEPAPADDK---TGAGGRLNAGLGFVVGLALLCMGVL 244
           P P  K P+   N  V A    A A +K   +G+GGR N G G  VGL L+CMG L
Sbjct: 197 PPPA-KAPSSAXNATVIAEEPSASASEKSDPSGSGGR-NVGYGXAVGLGLMCMGAL 250

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351724977|ref|NP_001238356.1| uncharacterized protein LOC100527846 precursor [Glycine max] gi|255633364|gb|ACU17039.1| unknown [Glycine max]

 Score =  234 bits (597), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 128/228 (56%), Positives = 160/228 (70%), Gaps = 7/228 (3%)

Query: 24  QIQAQAPAPAGPVNLTGILDKNGQFTTFIKLLISTQVANQIQSQINSSSEGMTVFAPTDN 83
           Q QA APAP+G VNLT IL+K GQ+TT IKLL  TQ   QI+SQ+ S+S+G T+FAPTDN
Sbjct: 22  QAQAPAPAPSGAVNLTAILEKGGQYTTLIKLLKDTQQLTQIESQLKSNSQGFTLFAPTDN 81

Query: 84  AFNNLEKGLLNNLDNQKQVQLVLYHVTSKFYRQSDLLLVSNPVRTLASGQD-VWGLNFTG 142
           AF +L+ G LN+L + K+V+L+L+HVT K+Y  SDLL VSNPVRT A+ ++  WGLNFTG
Sbjct: 82  AFQSLKPGALNDLSDDKKVKLILFHVTPKYYTISDLLTVSNPVRTQATEEEGAWGLNFTG 141

Query: 143 Q-GNQVNVSSGVVETPINSVLRQNFPLAVYQVDKVLLPEEL---SAAKSPSAAPAPEGKK 198
           Q GNQVN+S+GVV+T +N+ LR+ FPLAVYQVDKVLLP EL   +     S AP+P+G K
Sbjct: 142 QGGNQVNISTGVVQTQLNNALREKFPLAVYQVDKVLLPLELFGTTKTTHSSEAPSPKGSK 201

Query: 199 PTEGSNKKVPAASEPAPADDK--TGAGGRLNAGLGFVVGLALLCMGVL 244
            T        A   P+P  DK  T A    N   G VVGLAL+C+  L
Sbjct: 202 STPEIPSVGKAGGAPSPHGDKKDTNAANGRNVAFGLVVGLALICIEAL 249

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18399381|ref|NP_565475.1| fasciclin-like arabinogalactan protein 6 [Arabidopsis thaliana] gi|75206133|sp|Q9SIL7.2|FLA6_ARATH RecName: Full=Fasciclin-like arabinogalactan protein 6; Flags: Precursor gi|13377780|gb|AAK20859.1|AF333972_1 fasciclin-like arabinogalactan-protein 6 [Arabidopsis thaliana] gi|20198085|gb|AAD25652.2| putative surface protein [Arabidopsis thaliana] gi|330251928|gb|AEC07022.1| fasciclin-like arabinogalactan protein 6 [Arabidopsis thaliana]

 Score =  233 bits (594), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 134/255 (52%), Positives = 169/255 (66%), Gaps = 22/255 (8%)

Query: 1   MAAASASHILLTLAPLVLLLVLPQIQAQAPAPA-----GPVNLTGILDKNGQFTTFIKLL 55
           M+++  S+++L    L+ L  +P IQ+Q  APA      P+NLT IL+   QFTT I+LL
Sbjct: 1   MSSSLFSYVVL----LIFLFTIPYIQSQPTAPAPTTEKSPINLTAILEAGHQFTTLIQLL 56

Query: 56  ISTQVANQIQSQINSSSEGMTVFAPTDNAFNNLEKGLLNNLDNQKQVQLVLYHVTSKFYR 115
            +TQV  Q+  Q+NSS +GMT+FAPTDNAFN L+ G LN+L  Q+Q+QL+LYH+  K+Y 
Sbjct: 57  NTTQVGFQVSVQLNSSDQGMTIFAPTDNAFNKLKPGTLNSLTYQQQIQLMLYHIIPKYYS 116

Query: 116 QSDLLLVSNPVRTLASGQD--VWGLNFTGQG--NQVNVSSGVVETPINSVLRQNFPLAVY 171
            SDLLL SNPVRT A+GQD  V+GLNFTGQ   NQVNVS+GVVET IN+ LRQ FPLAVY
Sbjct: 117 LSDLLLASNPVRTQATGQDGGVFGLNFTGQAQSNQVNVSTGVVETRINNALRQQFPLAVY 176

Query: 172 QVDKVLLPEELSAAK-SPSAAPAPEGKKPTEGSNKKVPAASEPAPADDKTGAGGRL-NAG 229
            VD VLLPEEL   K +P+ APAP+       S+     A  PA  D+   AG  +    
Sbjct: 177 VVDSVLLPEELFGTKTTPTGAPAPK-------SSTSSSDADSPAADDEHKSAGSSVKRTS 229

Query: 230 LGFVVGLALLCMGVL 244
           LG VV  AL C  V+
Sbjct: 230 LGIVVSFALFCCSVI 244

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388506782|gb|AFK41457.1| unknown [Medicago truncatula]

 Score =  232 bits (591), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 140/255 (54%), Positives = 171/255 (67%), Gaps = 37/255 (14%)

Query: 9   ILLTLAPLVLLLVLPQIQAQAPAPA--GPVNLTGILDKNGQFTTFIKLLISTQVANQIQS 66
           ILLTL P +     PQIQAQAPAPA  GP+N+T I +K GQ+   I+LL  TQ   QIQ+
Sbjct: 12  ILLTLIPFLT----PQIQAQAPAPAPSGPINITTIFEKAGQYNFLIRLLNETQQLTQIQT 67

Query: 67  QINSSSEGMTVFAPTDNAFNNLEKGLLNNLDNQKQVQLVLYHVTSKFYRQSDLLLVSNPV 126
           Q+NS+SEG T+FAPTDNAF NL  G +N+L +Q++VQL+LYHVT K+Y  SD L VSNPV
Sbjct: 68  QLNSTSEGFTIFAPTDNAFQNLPSGAINDLSDQQKVQLILYHVTPKYYSLSDFLTVSNPV 127

Query: 127 RTLASGQD-VWGLNFTGQGNQVNVSSGVVETPINSVLRQNFPLAVYQVDKVLLPEEL--- 182
           RT ASG++  WGL+FT QGNQVNVS+GVV  PIN+ LRQ FPLAVYQ+DKVLLP EL   
Sbjct: 128 RTQASGKEGNWGLHFTSQGNQVNVSTGVVTVPINNALRQQFPLAVYQLDKVLLPFELFGA 187

Query: 183 -------------SAAKSPSAAPAPEGKKPTEGSNKKVPAASEPAPADDKTGAGGRLNAG 229
                        + +K+PS++   EG  P+  S+KK          DD   A GR N G
Sbjct: 188 KSPSSSPAPKSSKTPSKTPSSSDV-EGDAPSPASSKK----------DDS--AAGR-NVG 233

Query: 230 LGFVVGLALLCMGVL 244
            GFV GL L+CMGV 
Sbjct: 234 FGFVAGLGLICMGVF 248

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388502746|gb|AFK39439.1| unknown [Medicago truncatula]

 Score =  229 bits (583), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 139/255 (54%), Positives = 170/255 (66%), Gaps = 37/255 (14%)

Query: 9   ILLTLAPLVLLLVLPQIQAQAPAPA--GPVNLTGILDKNGQFTTFIKLLISTQVANQIQS 66
           ILLTL P +     PQIQAQAPAPA  GP+N+T I +K GQ+   I+LL  TQ   QIQ+
Sbjct: 12  ILLTLIPFLT----PQIQAQAPAPAPSGPINITTIFEKAGQYNFLIRLLNETQQLTQIQT 67

Query: 67  QINSSSEGMTVFAPTDNAFNNLEKGLLNNLDNQKQVQLVLYHVTSKFYRQSDLLLVSNPV 126
           Q+NS+SEG T+FAPTDNAF NL    +N+L +Q++VQL+LYHVT K+Y  SD L VSNPV
Sbjct: 68  QLNSTSEGFTIFAPTDNAFQNLPSEAINDLSDQQKVQLILYHVTPKYYSLSDFLTVSNPV 127

Query: 127 RTLASGQD-VWGLNFTGQGNQVNVSSGVVETPINSVLRQNFPLAVYQVDKVLLPEEL--- 182
           RT ASG++  WGL+FT QGNQVNVS+GVV  PIN+ LRQ FPLAVYQ+DKVLLP EL   
Sbjct: 128 RTQASGKEGNWGLHFTSQGNQVNVSTGVVTVPINNALRQQFPLAVYQLDKVLLPSELFGA 187

Query: 183 -------------SAAKSPSAAPAPEGKKPTEGSNKKVPAASEPAPADDKTGAGGRLNAG 229
                        + +K+PS++   E   P+  S+KK          DD   A GR N G
Sbjct: 188 KSPSSSPAPKSSKTPSKTPSSSDV-ERDAPSPASSKK----------DDS--AAGR-NVG 233

Query: 230 LGFVVGLALLCMGVL 244
            GFV GL L+CMGVL
Sbjct: 234 FGFVAGLGLICMGVL 248

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|24417458|gb|AAN60339.1| unknown [Arabidopsis thaliana]

 Score =  228 bits (581), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 131/228 (57%), Positives = 157/228 (68%), Gaps = 14/228 (6%)

Query: 24  QIQAQAPAPAGPVNLTGILDKNGQFTTFIKLLISTQVANQIQSQINSSSEGMTVFAPTDN 83
           Q  A  P PAGP+NLT IL+K GQFTTFI LL  TQV +Q+  Q+NSSSEGMTVFAPTDN
Sbjct: 26  QPAAPTPEPAGPINLTAILEKGGQFTTFIHLLNITQVGSQVNIQVNSSSEGMTVFAPTDN 85

Query: 84  AFNNLEKGLLNNLDNQKQVQLVLYHVTSKFYRQSDLLLVSNPVRTLASGQD--VWGLNFT 141
           AF NL+ G LN L    QV+L+LYHV+ K+Y   DLL VSNPVRT ASG+D  V+GLNFT
Sbjct: 86  AFQNLKPGTLNQLSPDDQVKLILYHVSPKYYSMDDLLSVSNPVRTQASGRDNGVYGLNFT 145

Query: 142 GQGNQVNVSSGVVETPINSVLRQNFPLAVYQVDKVLLPEELSAAKSPS-AAPAPEGKK-- 198
           GQ NQ+NVS+G VET I++ LRQ  PLAVY VD VLLP E+      S  APAP+ K   
Sbjct: 146 GQTNQINVSTGYVETRISNSLRQQRPLAVYVVDMVLLPGEMFGEHKLSPIAPAPKSKSGG 205

Query: 199 --PTEGSNKKVPAASEPAPADDKTGAGGRLNAGLGFVVGLALLCMGVL 244
                GS KK   A+ P+   DK+G+G +   GLGF +GL +LC+  L
Sbjct: 206 VTDDSGSTKK---AASPS---DKSGSGEK-KVGLGFGLGLIVLCLKFL 246

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	245
TAIR|locus:2054769	247	FLA6 "FASCICLIN-like arabinoga	0.579	0.574	0.623	1.6e-40
TAIR|locus:2024122	247	FLA9 "FASCICLIN-like arabinoog	0.579	0.574	0.631	3.3e-40
TAIR|locus:2167664	247	FLA13 "AT5G44130" [Arabidopsis	0.763	0.757	0.497	6.8e-40
TAIR|locus:2143443	246	FLA11 "FASCICLIN-like arabinog	0.579	0.577	0.482	3.9e-28
TAIR|locus:2175153	249	FLA12 "FASCICLIN-like arabinog	0.579	0.570	0.444	2.5e-26
TAIR|locus:2049218	254	FLA7 "FASCICLIN-like arabinoog	0.571	0.551	0.375	1.6e-17
TAIR|locus:2075185	420	SOS5 "salt overly sensitive 5"	0.571	0.333	0.317	2.3e-11
TAIR|locus:2101841	422	FLA10 "FASCICLIN-like arabinog	0.563	0.327	0.307	5e-11
TAIR|locus:2050822	420	FLA8 "FASCICLIN-like arabinoga	0.563	0.328	0.307	8.2e-11
TAIR|locus:2135818	403	FLA2 "FASCICLIN-like arabinoga	0.714	0.434	0.273	5.3e-09

TAIR|locus:2054769 FLA6 "FASCICLIN-like arabinogalactan 6" [Arabidopsis thaliana (taxid:3702)]

 Score = 431 (156.8 bits), Expect = 1.6e-40, P = 1.6e-40
 Identities = 91/146 (62%), Positives = 107/146 (73%)

Query:    37 NLTGILDKNGQFTTFIKLLISTQVAXXXXXXXXXXXEGMTVFAPTDNAFNNLEKGLLNNL 96
             NLT IL+   QFTT I+LL +TQV            +GMT+FAPTDNAFN L+ G LN+L
Sbjct:    38 NLTAILEAGHQFTTLIQLLNTTQVGFQVSVQLNSSDQGMTIFAPTDNAFNKLKPGTLNSL 97

Query:    97 DNQKQVQLVLYHVTSKFYRQSDLLLVSNPVRTLASGQD--VWGLNFTGQG--NQVNVSSG 152
               Q+Q+QL+LYH+  K+Y  SDLLL SNPVRT A+GQD  V+GLNFTGQ   NQVNVS+G
Sbjct:    98 TYQQQIQLMLYHIIPKYYSLSDLLLASNPVRTQATGQDGGVFGLNFTGQAQSNQVNVSTG 157

Query:   153 VVETPINSVLRQNFPLAVYQVDKVLL 178
             VVET IN+ LRQ FPLAVY VD VLL
Sbjct:   158 VVETRINNALRQQFPLAVYVVDSVLL 183

GO:0005886 "plasma membrane" evidence=ISM

GO:0031225 "anchored to membrane" evidence=TAS

GO:0010054 "trichoblast differentiation" evidence=RCA

GO:0016132 "brassinosteroid biosynthetic process" evidence=RCA

TAIR|locus:2024122 FLA9 "FASCICLIN-like arabinoogalactan 9" [Arabidopsis thaliana (taxid:3702)]

 Score = 428 (155.7 bits), Expect = 3.3e-40, P = 3.3e-40
 Identities = 91/144 (63%), Positives = 103/144 (71%)

Query:    37 NLTGILDKNGQFTTFIKLLISTQVAXXXXXXXXXXXEGMTVFAPTDNAFNNLEKGLLNNL 96
             NLT IL+K GQFTTFI LL  TQV            EGMTVFAPTDNAF NL+ G LN L
Sbjct:    39 NLTAILEKGGQFTTFIHLLNITQVGSQVNIQVNSSSEGMTVFAPTDNAFQNLKPGTLNQL 98

Query:    97 DNQKQVQLVLYHVTSKFYRQSDLLLVSNPVRTLASGQD--VWGLNFTGQGNQVNVSSGVV 154
                 QV+L+LYHV+ K+Y   DLL VSNPVRT ASG+D  V+GLNFTGQ NQ+NVS+G V
Sbjct:    99 SPDDQVKLILYHVSPKYYSMDDLLSVSNPVRTQASGRDNGVYGLNFTGQTNQINVSTGYV 158

Query:   155 ETPINSVLRQNFPLAVYQVDKVLL 178
             ET I++ LRQ  PLAVY VD VLL
Sbjct:   159 ETRISNSLRQQRPLAVYVVDMVLL 182

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0031225 "anchored to membrane" evidence=TAS

GO:0046658 "anchored to plasma membrane" evidence=IDA

TAIR|locus:2167664 FLA13 "AT5G44130" [Arabidopsis thaliana (taxid:3702)]

 Score = 425 (154.7 bits), Expect = 6.8e-40, P = 6.8e-40
 Identities = 95/191 (49%), Positives = 118/191 (61%)

Query:    37 NLTGILDKNGQFTTFIKLLISTQVAXXXXXXXXXXXEGMTVFAPTDNAFNNLEKGLLNNL 96
             N+T IL+K GQF T I+LL +TQ+            EGMTV APTDNAF NL+ G LN L
Sbjct:    36 NITAILEKGGQFVTLIRLLNTTQIGNQINIQINSSSEGMTVLAPTDNAFQNLKPGTLNKL 95

Query:    97 DNQKQVQLVLYHVTSKFYRQSDLLLVSNPVRTLASGQDV---WGLNFTGQGNQVNVSSGV 153
                 QV+L+LYHV+ KFY   DLL VSNPVRT ASG+DV   +GLNFTGQGNQVNVS+GV
Sbjct:    96 SPDDQVKLILYHVSPKFYTLEDLLSVSNPVRTQASGRDVGGVYGLNFTGQGNQVNVSTGV 155

Query:   154 VETPINSVLRQNFPLAVYQVDKVLLXXXXXXXXXXXXXXXXXXXXXTEGSNKKVPAASEP 213
             VET +++ LRQ  PLAVY VD VLL                      + S+    +    
Sbjct:   156 VETRLSTSLRQERPLAVYVVDMVLLPEEMFGERKISPMAPPPKSKSPDVSDDSESSKKAA 215

Query:   214 APAD-DKTGAG 223
             AP++ +K+G+G
Sbjct:   216 APSESEKSGSG 226

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0031225 "anchored to membrane" evidence=TAS

GO:0046658 "anchored to plasma membrane" evidence=IDA

GO:0009505 "plant-type cell wall" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

TAIR|locus:2143443 FLA11 "FASCICLIN-like arabinogalactan-protein 11" [Arabidopsis thaliana (taxid:3702)]

 Score = 314 (115.6 bits), Expect = 3.9e-28, P = 3.9e-28
 Identities = 70/145 (48%), Positives = 93/145 (64%)

Query:    37 NLTGILDKNGQFTTFIKLLISTQVAXXXXXXX-XXXXEGMTVFAPTDNAFNNLEKGLLNN 95
             N+T IL+K GQFT FI+LL STQ +             G+TVFAPTDNAFN+L+ G LN+
Sbjct:    36 NITAILEKAGQFTLFIRLLKSTQASDQINTQLNSSSSNGLTVFAPTDNAFNSLKSGTLNS 95

Query:    96 LDNQKQVQLVLYHVTSKFYRQSDLLLVSNPVRTLAS-GQD-VWGLNFTGQGNQVNVSSGV 153
             L +Q++VQLV +HV            VSNP+RT A  GQ+  + LN T  GNQVN+++GV
Sbjct:    96 LSDQQKVQLVQFHVLPTLITMPQFQTVSNPLRTQAGDGQNGKFPLNITSSGNQVNITTGV 155

Query:   154 VETPINSVLRQNFPLAVYQVDKVLL 178
             V   + + +  +  LAVYQVD+VLL
Sbjct:   156 VSATVANSVYSDKQLAVYQVDQVLL 180

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0031225 "anchored to membrane" evidence=TAS

GO:0009834 "secondary cell wall biogenesis" evidence=IMP

TAIR|locus:2175153 FLA12 "FASCICLIN-like arabinogalactan-protein 12" [Arabidopsis thaliana (taxid:3702)]

 Score = 297 (109.6 bits), Expect = 2.5e-26, P = 2.5e-26
 Identities = 64/144 (44%), Positives = 91/144 (63%)

Query:    37 NLTGILDKNGQFTTFIKLLISTQVAXXXXXXXXXXXEGMTVFAPTDNAFNNLEKGLLNNL 96
             N+T IL+K GQFT FI+LL ST VA            G+T+FAP+D++F  L+ G LN+L
Sbjct:    39 NVTKILEKAGQFTVFIRLLKSTGVANQLYGQLNNSDNGITIFAPSDSSFTGLKAGTLNSL 98

Query:    97 DNQKQVQLVLYHVTSKFYRQSDLLLVSNPVRTLA--SGQDVWGLNFTGQGNQVNVSSGVV 154
              +++QV+L+ +HV   +   S+   +SNP+RT A  S    + LN T  GN VN++SGV 
Sbjct:    99 TDEQQVELIQFHVIPSYVSSSNFQTISNPLRTQAGDSADGHFPLNVTTSGNTVNITSGVT 158

Query:   155 ETPINSVLRQNFPLAVYQVDKVLL 178
              T ++  +  +  LAVYQVDKVLL
Sbjct:   159 NTTVSGNVYSDGQLAVYQVDKVLL 182

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0031225 "anchored to membrane" evidence=TAS

GO:0009834 "secondary cell wall biogenesis" evidence=IMP

TAIR|locus:2049218 FLA7 "FASCICLIN-like arabinoogalactan 7" [Arabidopsis thaliana (taxid:3702)]

 Score = 214 (80.4 bits), Expect = 1.6e-17, P = 1.6e-17
 Identities = 54/144 (37%), Positives = 74/144 (51%)

Query:    37 NLTGILDKNGQFTTFIKLLISTQVAXXXXXXXXXXXEGMTVFAPTDNAFNNLEKGLLNNL 96
             NLT +L   G F TF+  L+ST V            EG+T+F P D+AF   +   L+NL
Sbjct:    46 NLTELLSVAGPFHTFLDYLLSTGVIETFQNQANNTEEGITIFVPKDDAFKAQKNPPLSNL 105

Query:    97 DNQKQVQLVLYHVTSKFYRQSDL--LLVSNPVRTLASGQDVWGLNFTGQGNQVNVSSGVV 154
                +  QLVL+H    +Y  S+   L  S PV T A GQ  + L FT     V + S   
Sbjct:   106 TKDQLKQLVLFHALPHYYSLSEFKNLSQSGPVSTFAGGQ--YSLKFTDVSGTVRIDSLWT 163

Query:   155 ETPINSVLRQNFPLAVYQVDKVLL 178
              T ++S +    P+AVYQV++VLL
Sbjct:   164 RTKVSSSVFSTDPVAVYQVNRVLL 187

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0031225 "anchored to membrane" evidence=TAS

GO:0046658 "anchored to plasma membrane" evidence=IDA

GO:0016020 "membrane" evidence=IDA

GO:0006084 "acetyl-CoA metabolic process" evidence=RCA

GO:0009664 "plant-type cell wall organization" evidence=RCA

GO:0009832 "plant-type cell wall biogenesis" evidence=RCA

GO:0010075 "regulation of meristem growth" evidence=RCA

GO:0016126 "sterol biosynthetic process" evidence=RCA

GO:0016132 "brassinosteroid biosynthetic process" evidence=RCA

TAIR|locus:2075185 SOS5 "salt overly sensitive 5" [Arabidopsis thaliana (taxid:3702)]

 Score = 163 (62.4 bits), Expect = 2.3e-11, P = 2.3e-11
 Identities = 47/148 (31%), Positives = 77/148 (52%)

Query:    37 NLTGILDKNGQFTTFIKLLISTQVAXXXXXXXXXXXEGMTVFAPTDNAFNNLEKGL-LNN 95
             NLT IL     F   + LL+++ V             G+TVF PTD+AF++L   + L +
Sbjct:   207 NLTQILINGHNFNVALSLLVASGVITEFENDERGA--GITVFVPTDSAFSDLPSNVNLQS 264

Query:    96 LDNQKQVQLVLYHVTSKFYRQSDLLLVSNPVR-TLAS---GQDVWGLNFTG-QGNQVNVS 150
             L  +++  ++ +HV   +Y    L  ++NPV+ TLA+   G   + LN +   G+ V ++
Sbjct:   265 LPAEQKAFVLKFHVLHSYYTLGSLESITNPVQPTLATEEMGAGSYTLNISRVNGSIVTIN 324

Query:   151 SGVVETPINSVLRQNFPLAVYQVDKVLL 178
             SGVV   +        P++V+ V KVLL
Sbjct:   325 SGVVLAVVTQTAFDQNPVSVFGVSKVLL 352

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0031225 "anchored to membrane" evidence=TAS

GO:0007155 "cell adhesion" evidence=ISS

GO:0009651 "response to salt stress" evidence=IMP

GO:0009825 "multidimensional cell growth" evidence=IMP

GO:0009897 "external side of plasma membrane" evidence=IDA

GO:0030247 "polysaccharide binding" evidence=TAS

GO:0046658 "anchored to plasma membrane" evidence=IDA

TAIR|locus:2101841 FLA10 "FASCICLIN-like arabinogalactan-protein 10" [Arabidopsis thaliana (taxid:3702)]

 Score = 160 (61.4 bits), Expect = 5.0e-11, P = 5.0e-11
 Identities = 44/143 (30%), Positives = 73/143 (51%)

Query:    37 NLTGILDKNGQFTTFIKLLISTQVAXXXXXXXXXXXEGMTVFAPTDNAFNNLEKGLLNNL 96
             N+TG+L+K G   TF  LL+S+ V            +G+TVFAP+D AF       L NL
Sbjct:   190 NITGLLEKAG-CKTFANLLVSSGVIKTFESTVE---KGLTVFAPSDEAFKARGVPDLTNL 245

Query:    97 DNQKQVQLVLYHVTSKFYRQSDLLLVSNPVRTLAS-GQDVWGLNFTGQGNQVNVSSGVVE 155
                + V L+ YH  +++  +  L    + + TLA+ G   + L  +  G++V + +GV  
Sbjct:   246 TQAEVVSLLEYHALAEYKPKGSLKTNKDAISTLATNGAGKYDLTTSTSGDEVILHTGVGP 305

Query:   156 TPINSVLRQNFPLAVYQVDKVLL 178
             + +   +    P+ ++ VD VLL
Sbjct:   306 SRLADTVVDETPVVIFTVDNVLL 328

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0031225 "anchored to membrane" evidence=TAS

GO:0046658 "anchored to plasma membrane" evidence=IDA

TAIR|locus:2050822 FLA8 "FASCICLIN-like arabinogalactan protein 8" [Arabidopsis thaliana (taxid:3702)]

 Score = 158 (60.7 bits), Expect = 8.2e-11, P = 8.2e-11
 Identities = 44/143 (30%), Positives = 72/143 (50%)

Query:    37 NLTGILDKNGQFTTFIKLLISTQVAXXXXXXXXXXXEGMTVFAPTDNAFNNLEKGLLNNL 96
             N+TG+L+K G   TF  LL+S+ V            +G+TVFAP+D AF       L  L
Sbjct:   189 NITGLLEKAG-CKTFANLLVSSGVLKTYESAVE---KGLTVFAPSDEAFKAEGVPDLTKL 244

Query:    97 DNQKQVQLVLYHVTSKFYRQSDLLLVSNPVRTLAS-GQDVWGLNFTGQGNQVNVSSGVVE 155
                + V L+ YH  +++  +  L    N + TLA+ G   + L  +  G++V + +GV  
Sbjct:   245 TQAEVVSLLEYHALAEYKPKGSLKTNKNNISTLATNGAGKFDLTTSTSGDEVILHTGVAP 304

Query:   156 TPINSVLRQNFPLAVYQVDKVLL 178
             + +   +    P+ ++ VD VLL
Sbjct:   305 SRLADTVLDATPVVIFTVDNVLL 327

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0031225 "anchored to membrane" evidence=TAS

GO:0046658 "anchored to plasma membrane" evidence=IDA

GO:0009505 "plant-type cell wall" evidence=IDA

GO:0048046 "apoplast" evidence=IDA

GO:0007389 "pattern specification process" evidence=RCA

GO:0008361 "regulation of cell size" evidence=RCA

GO:0009664 "plant-type cell wall organization" evidence=RCA

GO:0009832 "plant-type cell wall biogenesis" evidence=RCA

GO:0009926 "auxin polar transport" evidence=RCA

GO:0010015 "root morphogenesis" evidence=RCA

GO:0040007 "growth" evidence=RCA

TAIR|locus:2135818 FLA2 "FASCICLIN-like arabinogalactan 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 141 (54.7 bits), Expect = 5.3e-09, P = 5.3e-09
 Identities = 50/183 (27%), Positives = 71/183 (38%)

Query:    38 LTGILDKNGQFTTFIKLLISTQVAXXXXXXXXXXXEGMTVFAPTDNAFNNLEKGLLNNLD 97
             LT IL+K G    F  +L ST               G+TVF P+D+A          +L 
Sbjct:   191 LTTILEKQG-CKAFSDILKST---GADKTFQDTVDGGLTVFCPSDSAVGKFMPKF-KSLS 245

Query:    98 NQKQVQLVLYHVTSKFYRQSDLLLVSN-PVRTLAS-GQDVWGLNFTGQGNQVNVSSGVVE 155
                +  LVLYH     Y+   +L   N  V TLA+ G + +       G  V + + VV 
Sbjct:   246 PANKTALVLYH-GMPVYQSLQMLRSGNGAVNTLATEGNNKFDFTVQNDGEDVTLETDVVT 304

Query:   156 TPINSVLRQNFPLAVYQVDKVLLXXXXXXXXXXXXXXXXXXXXXTEGSNKKVPAASEPAP 215
               +   L+   PL VY++DKVLL                      + +       S  AP
Sbjct:   305 AKVMGTLKDQEPLIVYKIDKVLLPREIYKAVKTSAPAPKSSKKKPKNAEADADGPSADAP 364

Query:   216 ADD 218
             +DD
Sbjct:   365 SDD 367

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0031225 "anchored to membrane" evidence=TAS

GO:0046658 "anchored to plasma membrane" evidence=IDA

GO:0005774 "vacuolar membrane" evidence=IDA

GO:0016020 "membrane" evidence=IDA

GO:0006084 "acetyl-CoA metabolic process" evidence=RCA

GO:0006816 "calcium ion transport" evidence=RCA

GO:0007030 "Golgi organization" evidence=RCA

GO:0009651 "response to salt stress" evidence=RCA

GO:0016126 "sterol biosynthetic process" evidence=RCA

GO:0016132 "brassinosteroid biosynthetic process" evidence=RCA

GO:0048767 "root hair elongation" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9SIL7	FLA6_ARATH	No assigned EC number	0.5254	0.9510	0.9433	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	245
pfam02469	123	pfam02469, Fasciclin, Fasciclin domain	3e-20
smart00554	97	smart00554, FAS1, Four repeated domains in the Fas	5e-15
COG2335	187	COG2335, COG2335, Secreted and surface protein con	5e-09

>gnl|CDD|217054 pfam02469, Fasciclin, Fasciclin domain

 Score = 82.7 bits (205), Expect = 3e-20
 Identities = 44/137 (32%), Positives = 62/137 (45%), Gaps = 17/137 (12%)

Query: 46  GQFTTFIKLLISTQVANQIQSQINSSSEGMTVFAPTDNAFNNLEKGLLNNL--DNQKQVQ 103
             F+TF+ LL +  + + +    N S    TVFAPTD AF  L  G LN L  D ++   
Sbjct: 1   PGFSTFVALLKAAGLVDTL----NGSQGPFTVFAPTDEAFAKLPAGTLNFLLKDKEQLKN 56

Query: 104 LVLYHVTSKFYRQSDLLLVSNPVRTLASGQDVWGLNFTGQGNQVNV-SSGVVETPINSVL 162
           L+ YHV       SDL      + TL   +    L     G  V V  + VV++ I +  
Sbjct: 57  LLKYHVVPGRLTSSDLKNGGT-LATLQGSK----LRVNVTGGTVTVNGARVVQSDIEAT- 110

Query: 163 RQNFPLAVYQVDKVLLP 179
                  ++ +DKVLLP
Sbjct: 111 ----NGVIHVIDKVLLP 123

This extracellular domain is found repeated four times in grasshopper fasciclin I as well as in proteins from mammals, sea urchins, plants, yeast and bacteria. Length = 123

>gnl|CDD|214719 smart00554, FAS1, Four repeated domains in the Fasciclin I family of proteins, present in many other contexts

 Score = 68.2 bits (167), Expect = 5e-15
 Identities = 36/105 (34%), Positives = 45/105 (42%), Gaps = 8/105 (7%)

Query: 76  TVFAPTDNAFNNLEKGLLNNLDNQKQVQLVLYHVTSKFYRQSDLLLVSNPVRTLASGQDV 135
           TVFAPTD AF  L    LN+L   K   L+LYHV       +DLL     + TLA  +  
Sbjct: 1   TVFAPTDEAFQKLPPD-LNSLLADKLKNLLLYHVVPGRLSSADLLN-GGTLPTLAGSK-- 56

Query: 136 WGLNFTGQGNQVNVSSGVVETPINSVLRQNFPLAVYQVDKVLLPE 180
             L  T  G    V+       I           V+ +D+VLLP 
Sbjct: 57  --LRITRSGGSGTVTVNGA--RIVEADIAATNGVVHVIDRVLLPP 97

Length = 97

>gnl|CDD|225214 COG2335, COG2335, Secreted and surface protein containing fasciclin-like repeats [Cell envelope biogenesis, outer membrane]

 Score = 53.9 bits (130), Expect = 5e-09
 Identities = 42/169 (24%), Positives = 65/169 (38%), Gaps = 33/169 (19%)

Query: 26  QAQAPAPAGPVNLTG----ILD---KNGQFTTFIKLLISTQVANQIQSQINSSSEGMTVF 78
            A      G   + G    I++    N  FTT +  L   + A  +     + +   TVF
Sbjct: 31  LANGTLETGRAAVKGNRADIVESAANNPSFTTLVAAL---KAAGLVD--TLNETGPFTVF 85

Query: 79  APTDNAFNNLEKG----LLNNLDNQKQVQLVLYHVTSKFYRQSDLLLVSNPVRTLASGQD 134
           APT+ AF  L  G    LL   +     +++ YHV       +DL    + V+T+     
Sbjct: 86  APTNEAFAKLPAGTLDALLKPENKPLLTKILTYHVVEGKITAADLKSSGS-VKTVQGAD- 143

Query: 135 VWGLNFTGQGNQVNVS-SGVVETPI---NSVLRQNFPLAVYQVDKVLLP 179
              L     G  V V+ + V    I   N V        ++ +DKVL+P
Sbjct: 144 ---LKIKVTGGGVYVNDATVTIADINASNGV--------IHVIDKVLIP 181

Length = 187

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	245
COG2335	187	Secreted and surface protein containing fasciclin-	99.92
PF02469	128	Fasciclin: Fasciclin domain; InterPro: IPR000782 T	99.88
smart00554	99	FAS1 Four repeated domains in the Fasciclin I fami	99.8
KOG1437	682	consensus Fasciclin and related adhesion glycoprot	99.12
KOG1437	682	consensus Fasciclin and related adhesion glycoprot	98.98

>COG2335 Secreted and surface protein containing fasciclin-like repeats [Cell envelope biogenesis, outer membrane]

Probab=99.92  E-value=3.6e-25  Score=187.79  Aligned_cols=136  Identities=24%  Similarity=0.339  Sum_probs=113.6

Q ss_pred             CCCCHHHHHhcCCChHHHHHHHHHcCchHHHhhcccCCCCCeEEEecCcHHHHhchhhhhhhcc----HHHHHHhhhhcc
Q 025959           34 GPVNLTGILDKNGQFTTFIKLLISTQVANQIQSQINSSSEGMTVFAPTDNAFNNLEKGLLNNLD----NQKQVQLVLYHV  109 (245)
Q Consensus        34 ~~~nI~~iL~~~g~fS~F~~lL~~tgl~~~L~~~l~~s~~~~TVFAPTD~AF~~l~~~~l~~Ls----~~~l~~LL~yHV  109 (245)
                      ...+|.+...++++|++|..+++.++|.++|+.     .++||||||||+||.+++.++++.|-    +++|..+|.|||
T Consensus        46 ~~~~iV~~a~~~~~f~tl~~a~~aa~Lv~~L~~-----~gp~TVFaPtn~AFa~lp~~T~~~Ll~pen~~~L~~iLtYHV  120 (187)
T COG2335          46 NRADIVESAANNPSFTTLVAALKAAGLVDTLNE-----TGPFTVFAPTNEAFAKLPAGTLDALLKPENKPLLTKILTYHV  120 (187)
T ss_pred             chhHHHHHHccCcchHHHHHHHHhhhhHHHhcC-----CCCeEEecCCHHHHHhCChhHHHHHhCccchhhhheeeEEEE
Confidence            356788888899999999999999999999997     89999999999999999999998873    468999999999


Q ss_pred             cccccchhhhccCCcceeccCCCCceeEEEEEeecceEEEecceeeeeeeeccccCCCeEEEEECccccCCCCC
Q 025959          110 TSKFYRQSDLLLVSNPVRTLASGQDVWGLNFTGQGNQVNVSSGVVETPINSVLRQNFPLAVYQVDKVLLPEELS  183 (245)
Q Consensus       110 ip~~~~~s~l~~~s~~v~T~~g~~~~~~LnVt~~g~~V~v~~gvv~a~V~n~~~~~~ngvIhvID~VLlP~~l~  183 (245)
                      ++|+++.+++... +.++|..|..    ++|...++.++|+.    ++|...++..+||+||+||+||+|+...
T Consensus       121 v~Gk~~~~~l~~~-~~v~t~~G~~----~~i~~~~~~~~Vn~----a~v~~~di~a~NgvIhvID~Vl~Pp~~~  185 (187)
T COG2335         121 VEGKITAADLKSS-GSVKTVQGAD----LKIKVTGGGVYVND----ATVTIADINASNGVIHVIDKVLIPPMDL  185 (187)
T ss_pred             EcCcccHHHhhcc-ccceeecCce----EEEEEcCCcEEEee----eEEEeccEeccCcEEEEEeeeccCCCcc
Confidence            9999999999865 4799998763    44444444588874    4444445667899999999999998753

>PF02469 Fasciclin: Fasciclin domain; InterPro: IPR000782 The FAS1 (fasciclin-like) domain is an extracellular module of about 140 amino acid residues

Probab=99.88  E-value=1.1e-22  Score=161.09  Aligned_cols=125  Identities=25%  Similarity=0.336  Sum_probs=94.3

Q ss_pred             CChHHHHHHHHHcCchHHHhhcccCCCCCeEEEecCcHHHHhchhhhhhhc--cHHHHHHhhhhcccccccchhhhccCC
Q 025959           46 GQFTTFIKLLISTQVANQIQSQINSSSEGMTVFAPTDNAFNNLEKGLLNNL--DNQKQVQLVLYHVTSKFYRQSDLLLVS  123 (245)
Q Consensus        46 g~fS~F~~lL~~tgl~~~L~~~l~~s~~~~TVFAPTD~AF~~l~~~~l~~L--s~~~l~~LL~yHVip~~~~~s~l~~~s  123 (245)
                      ++||+|.++|+++|+.+.|++    +.+.||||||+|+||++++.+..+.+  ..+++.++|+|||+++.++.+++....
T Consensus         1 ~~~s~f~~~l~~~~l~~~l~~----~~~~~TvfaP~d~a~~~~~~~~~~~~~~~~~~l~~~l~~hiv~~~~~~~~l~~~~   76 (128)
T PF02469_consen    1 PDLSTFSRLLEQAGLADLLND----SDGNYTVFAPTDDAFQKLSQETNSSLADSKEQLKSLLKYHIVPGSITSSDLRNGK   76 (128)
T ss_dssp             -TTHHHHHHHHHTTCHHHHGC----SSSSEEEEEE-HHHHHHSHHHHHHHHHTHHHHHHHHHHHTEEES---HCHHHCHH
T ss_pred             CCHHHHHHHHHHcCCHHHHhc----CCCCEEEEEECHHHHHhccccccchhhhhhhhHhhhhhhEEEcCceehhhhcccc
Confidence            479999999999999999953    26899999999999999976656655  567899999999999999999998762


Q ss_pred             cceec-cCCCCceeEEEEEeecceEEEecceeeeeeeeccccCCCeEEEEECccccC
Q 025959          124 NPVRT-LASGQDVWGLNFTGQGNQVNVSSGVVETPINSVLRQNFPLAVYQVDKVLLP  179 (245)
Q Consensus       124 ~~v~T-~~g~~~~~~LnVt~~g~~V~v~~gvv~a~V~n~~~~~~ngvIhvID~VLlP  179 (245)
                      ..++| +.|.  .+.++....++.++|++   +++|....+...||+||+||+||+|
T Consensus        77 ~~~~t~~~g~--~~~v~~~~~~~~~~v~~---~a~i~~~~~~~~nG~ih~id~vL~P  128 (128)
T PF02469_consen   77 QTLETLLNGQ--PLRVSSSPSNGTIYVNG---KARIVKSDIEASNGVIHIIDDVLIP  128 (128)
T ss_dssp             EEEEBSSTTC--EEEEEEEGGTTEEEECC---EEEESEEEEEESSEEEEEESS-TSS
T ss_pred             ccceeccCCC--EEEEEEEecCCceEecC---ceEEEeCCEEeCCEEEEEECceECc
Confidence            36888 5554  25555543367888876   4555545556678999999999998

It has been suggested that the FAS1 domain represents an ancient cell adhesion domain common to plants and animals []; related FAS1 domains are also found in bacteria []. The crystal structure of FAS1 domains 3 and 4 of fasciclin I from Drosophila melanogaster (Fruit fly) has been determined, revealing a novel domain fold consisting of a seven-stranded beta wedge and at least five alpha helices; two well-ordered N-acetylglucosamine groups attached to a conserved asparagine are located in the interface region between the two FAS1 domains []. Fasciclin I is an insect neural cell adhesion molecule involved in axonal guidance that is attached to the membrane by a GPI-anchored protein. FAS1 domains are present in many secreted and membrane-anchored proteins. These proteins are usually GPI anchored and consist of: (i) a single FAS1 domain, (ii) a tandem array of FAS1 domains, or (iii) FAS1 domain(s) interspersed with other domains. Proteins known to contain a FAS1 domain include: Fasciclin I (4 FAS1 domains). Human TGF-beta induced Ig-H3 (BIgH3) protein (4 FAS1 domains), where the FAS1 domains mediate cell adhesion through an interaction with alpha3/beta1 integrin; mutation in the FAS1 domains result in corneal dystrophy []. Volvox major cell adhesion protein (2 FAS1 domains) []. Arabidopsis fasciclin-like arabinogalactan proteins (2 FAS1 domains) []. Mammalian stabilin protein, a family of fasciclin-like hyaluronan receptor homologues (7 FAS1 domains)[]. Human extracellular matrix protein periostin (4 FAS1 domains). Bacterial immunogenic protein MPT70 (1 FAS1 domain) []. The FAS1 domains of both human periostin (Q15063 from SWISSPROT) and BIgH3 (Q15582 from SWISSPROT) proteins were found to contain vitamin K-dependent gamma-carboxyglutamate residues []. Gamma-carboxyglutamate residues are more commonly associated with GLA domains (IPR000294 from INTERPRO), where they occur through post-translational modification catalysed by the vitamin K-dependent enzyme gamma-glutamylcarboxylase.; PDB: 1O70_A 1W7D_A 1W7E_A 1NYO_A 1X3B_A 2VXP_A.

>smart00554 FAS1 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts

Probab=99.80  E-value=1.3e-19  Score=138.09  Aligned_cols=96  Identities=40%  Similarity=0.482  Sum_probs=76.2

Q ss_pred             EEEecCcHHHHhchhhhhhhccHH-HHHHhhhhcccccccchhhhccCCcceeccCCCCceeEEEEEeec--ceEEEecc
Q 025959           76 TVFAPTDNAFNNLEKGLLNNLDNQ-KQVQLVLYHVTSKFYRQSDLLLVSNPVRTLASGQDVWGLNFTGQG--NQVNVSSG  152 (245)
Q Consensus        76 TVFAPTD~AF~~l~~~~l~~Ls~~-~l~~LL~yHVip~~~~~s~l~~~s~~v~T~~g~~~~~~LnVt~~g--~~V~v~~g  152 (245)
                      |||||+|+||+++....++.+..+ .++++|+|||+++.++.++|..+ ..++|+.|.    .|.++.++  +.+.+++ 
T Consensus         1 TvfaP~d~Af~~~~~~~~~~l~~~~~l~~ll~~Hiv~~~~~~~~l~~~-~~~~Tl~g~----~l~v~~~~~~~~i~in~-   74 (99)
T smart00554        1 TVFAPTDEAFQKLPPGTLNSLLADPKLKNLLLYHVVPGRLSSADLLNG-GTLPTLAGS----KLRVTRSGDSGTVTVNG-   74 (99)
T ss_pred             CEeCcCHHHHHhcCHHHHHHHhCCHHHHHHHHhcEeCceEcHHHhccC-CccccCCCC----EEEEEEeCCCCeEEEcc-
Confidence            899999999999987666677544 89999999999999999999875 478999864    24555544  6777765 


Q ss_pred             eeeeeeeeccccCCCeEEEEECccccCC
Q 025959          153 VVETPINSVLRQNFPLAVYQVDKVLLPE  180 (245)
Q Consensus       153 vv~a~V~n~~~~~~ngvIhvID~VLlP~  180 (245)
                         ++|...++..+||+||+||+||+|+
T Consensus        75 ---~~v~~~di~~~nGvih~Id~vL~P~   99 (99)
T smart00554       75 ---ARIVEADIAATNGVVHVIDRVLLPP   99 (99)
T ss_pred             ---eEEEECCEecCCeEEEEECceeCCC
Confidence               3444555566789999999999986

>KOG1437 consensus Fasciclin and related adhesion glycoproteins [Cell wall/membrane/envelope biogenesis; Extracellular structures]

Probab=99.12  E-value=6.2e-11  Score=117.89  Aligned_cols=133  Identities=19%  Similarity=0.221  Sum_probs=99.6

Q ss_pred             CCCCHHHHHhcCCChHHHHHHHHHcCchHHHhhcccCCCCCeEEEecCcHHHHhchhhhhhhccHHHHHHhhhhcccccc
Q 025959           34 GPVNLTGILDKNGQFTTFIKLLISTQVANQIQSQINSSSEGMTVFAPTDNAFNNLEKGLLNNLDNQKQVQLVLYHVTSKF  113 (245)
Q Consensus        34 ~~~nI~~iL~~~g~fS~F~~lL~~tgl~~~L~~~l~~s~~~~TVFAPTD~AF~~l~~~~l~~Ls~~~l~~LL~yHVip~~  113 (245)
                      +..+++++..++ +-+++.+++.+-|+.+.|..     ++.+|+|+|+|++|+.+.+...    +.-++++|+||+|+.+
T Consensus       372 ~~~~l~~La~e~-~~st~~rlv~elgll~~L~~-----n~e~t~~lp~n~~fd~~~~~~~----r~l~~qIL~~HII~~~  441 (682)
T KOG1437|consen  372 SLKNLMSLARED-EISTSMRLVAELGLLTALAP-----NDEATLLLPTNNLFDDLTPLES----RRLAEQILYNHIIPEY  441 (682)
T ss_pred             hHHHHHHHHhcc-cccHHHHHHHhccceEEEcC-----CCceEEeeehhhhccCCChhhh----HHHHHHHHHHhCcchh
Confidence            467788888776 36999999999998887765     5569999999999999765322    2337999999999999


Q ss_pred             cchhhhccCCcceeccCCCCceeEEEEEeec---ceEEEecceeeeeeeeccccCCCeEEEEECccccC
Q 025959          114 YRQSDLLLVSNPVRTLASGQDVWGLNFTGQG---NQVNVSSGVVETPINSVLRQNFPLAVYQVDKVLLP  179 (245)
Q Consensus       114 ~~~s~l~~~s~~v~T~~g~~~~~~LnVt~~g---~~V~v~~gvv~a~V~n~~~~~~ngvIhvID~VLlP  179 (245)
                      .+.+++..+.+.++|..+..  +..-+.+..   +...+..|.. +.|...+....||+||.||+||.|
T Consensus       442 ~~~~~~y~~~~~v~t~g~~~--l~~fv~r~~~s~~~t~i~~~~~-~~Ii~aDi~~~nGvvH~id~vl~p  507 (682)
T KOG1437|consen  442 LTSSSMYNGQTTVRTLGKNK--LLYFVYRHSVSANVTDILIGNE-ACIIEADISVKNGVVHIIDRVLDP  507 (682)
T ss_pred             hhhhhhhcccceeeccCCeE--EEEEEecccccccceeeeccce-eeEEecccceecCceEEeeEEcCc
Confidence            99999998866788886542  332333322   2122222223 666677788889999999999999

>KOG1437 consensus Fasciclin and related adhesion glycoproteins [Cell wall/membrane/envelope biogenesis; Extracellular structures]

Probab=98.98  E-value=1.5e-09  Score=108.15  Aligned_cols=133  Identities=23%  Similarity=0.329  Sum_probs=91.4

Q ss_pred             CCCHHHHHhcCCChHHHHHHHHHcCchHHHhhcccCCCCCeEEEecCcHHHHhchhhhhhhc-cHHHHHHhhhhcccccc
Q 025959           35 PVNLTGILDKNGQFTTFIKLLISTQVANQIQSQINSSSEGMTVFAPTDNAFNNLEKGLLNNL-DNQKQVQLVLYHVTSKF  113 (245)
Q Consensus        35 ~~nI~~iL~~~g~fS~F~~lL~~tgl~~~L~~~l~~s~~~~TVFAPTD~AF~~l~~~~l~~L-s~~~l~~LL~yHVip~~  113 (245)
                      |.++.+.|++++++|.|.++++..++.++|..     .+.||+|+|||+||.+...+... + ....+..+++||++++.
T Consensus       507 p~~l~~~l~~d~r~s~~~~~le~~~l~e~l~~-----~~~~t~fvPt~ka~~~~~~~~~~-~~~~~~l~~~l~yH~v~~~  580 (682)
T KOG1437|consen  507 PVSLMEDLKTDGRISGTVQGLEGVLLPEELTP-----EGNYTLFVPTNKAWQKSTKDEKS-LFHKKALQDFLKYHLVPGQ  580 (682)
T ss_pred             cccHHHHHhhccchhhhHHhhhhcCChhhhcc-----CCceEEEeecccccccCCcchhh-cchHHHHHHHHHhccccce
Confidence            47899999999999999999999999999965     78999999999999988654332 3 34688999999999998


Q ss_pred             cchhhhccCCcceeccCCCCceeEEEEEeecceEEE----ecceee-eeeeeccccCCCeEEEEECccccCCCCC
Q 025959          114 YRQSDLLLVSNPVRTLASGQDVWGLNFTGQGNQVNV----SSGVVE-TPINSVLRQNFPLAVYQVDKVLLPEELS  183 (245)
Q Consensus       114 ~~~s~l~~~s~~v~T~~g~~~~~~LnVt~~g~~V~v----~~gvv~-a~V~n~~~~~~ngvIhvID~VLlP~~l~  183 (245)
                      +.   +.-.+.+. ++.+    +.+++.+  +.+-+    .++.++ .++........||++|+||.||.|+.++
T Consensus       581 ~~---ls~~~~~~-v~~~----~k~s~~~--~~~~~~~~~~~~~vn~e~~~~~~i~~~n~~~h~i~~vl~p~~l~  645 (682)
T KOG1437|consen  581 SR---LSLGSSPY-VMIQ----VKLSLRG--DHLFFSLVNPRGDVNKERLVGIDIMGTNGVVHVIDLVLKPPDLP  645 (682)
T ss_pred             ee---eecccccc-eeee----eeEEEec--ccEEeeeeccccceeeeeeeccceeeecceeEEEEEEcccCcch
Confidence            75   22221111 1111    1122222  21111    123222 2333445556789999999999998543

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	245
2vxp_A	132	Transforming growth factor-beta-induced protein IG	5e-11
1w7d_A	137	Fasciclin-like protein; cell adhesion; NMR {Rhodob	5e-11
1nyo_A	163	Immunogenic protein MPT70; seven-stranded beta-bar	6e-11
1o70_A	324	Fasciclin I, FAS I, FCN; cell adhesion, AXON guida	8e-08
1o70_A	324	Fasciclin I, FAS I, FCN; cell adhesion, AXON guida	2e-07

>2vxp_A Transforming growth factor-beta-induced protein IG-H3; RGD-containing collagen-associated protein, FAS1, BIGH3, vision, amyloid, RGD-CAP, secreted; 2.5A {Homo sapiens} PDB: 1x3b_A Length = 132

 Score = 57.7 bits (140), Expect = 5e-11
 Identities = 25/140 (17%), Positives = 50/140 (35%), Gaps = 23/140 (16%)

Query: 37  NLTGILDKNGQFTTFIKLLISTQVANQIQSQINSSSEGMTVFAPTDNAFNNLEKGLLNNL 96
            +  +L  + +F+  +  + S  +   +  +        TVFAPT+ AF  L     + L
Sbjct: 3   TVMDVLKGDNRFSMLVAAIQSAGLTETLNRE-----GVYTVFAPTNEAFRALPPRERSRL 57

Query: 97  DNQKQ--VQLVLYHVTSKFYRQSDLLLVSNPVRTLASGQDVWGLNFTGQGNQVNVSSGVV 154
               +    ++ YH+  +        + +        G     L  + + N V+V+   V
Sbjct: 58  LGDAKELANILKYHIGDEILVSGG--IGALVRLKSLQGDK---LEVSLKNNVVSVNKEPV 112

Query: 155 ETP-----------INSVLR 163
             P           I +VL+
Sbjct: 113 AEPDIMATNGVVHVITNVLQ 132

>1w7d_A Fasciclin-like protein; cell adhesion; NMR {Rhodobacter sphaeroides} PDB: 1w7e_A Length = 137

 Score = 57.8 bits (140), Expect = 5e-11
 Identities = 33/150 (22%), Positives = 57/150 (38%), Gaps = 25/150 (16%)

Query: 37  NLTGILDKNGQFTTFIKLLISTQVANQIQSQINSSSEGMTVFAPTDNAFNNLEKGLLNNL 96
           ++       G FTT +    +  + + ++          TVFAPTD AF  L +G + +L
Sbjct: 4   DIVETATGAGSFTTLLTAAEAAGLVDTLKGD-----GPFTVFAPTDAAFAALPEGTVEDL 58

Query: 97  ----DNQKQVQLVLYHVTSKFYRQSDLLLVSNPVRTLASGQDVWGLNFTGQGNQVNVSSG 152
               + +K  +++ YHV       SD  L          G     L  T +G        
Sbjct: 59  LKPENKEKLTEILTYHVVPGEVMSSD--LTEGMTAETVEGGA---LTVTLEGGPKVNGVS 113

Query: 153 VVETPI---NSVLRQNFPLAVYQVDKVLLP 179
           + +  +   N V        ++ +D VL+P
Sbjct: 114 ISQPDVDASNGV--------IHVIDGVLMP 135

>1nyo_A Immunogenic protein MPT70; seven-stranded beta-barrel, fasciclin domain, structural genomics, PSI, protein structure initiative; NMR {Mycobacterium tuberculosis} SCOP: b.118.1.1 Length = 163

 Score = 58.2 bits (141), Expect = 6e-11
 Identities = 36/159 (22%), Positives = 60/159 (37%), Gaps = 26/159 (16%)

Query: 29  APAPAGPVNLTGILDKNGQFTTFIKLLISTQVANQIQSQINSSSEG--MTVFAPTDNAFN 86
           +        +      N + TT    L         Q  +  +      TVFAPT+ AF+
Sbjct: 21  SVQGMSQDPVAVAASNNPELTTLTAAL---SGQLNPQVNLVDTLNSGQYTVFAPTNAAFS 77

Query: 87  NLEKGLLNNLDNQKQ--VQLVLYHVTSKFYRQSDLLLVSNPVRTLASGQDVWGLNFTGQG 144
            L    ++ L         ++ YHV +     +++       +TL  G     +  TGQG
Sbjct: 78  KLPASTIDELKTNSSLLTSILTYHVVAGQTSPANV---VGTRQTL-QGAS---VTVTGQG 130

Query: 145 NQVNV-SSGVVETPI---NSVLRQNFPLAVYQVDKVLLP 179
           N + V ++ VV   +   N+         VY +D VL+P
Sbjct: 131 NSLKVGNADVVCGGVSTANAT--------VYMIDSVLMP 161

>1o70_A Fasciclin I, FAS I, FCN; cell adhesion, AXON guidance, extracellular module, genetic disorder, corneal dystrophy; HET: NAG; 2.6A {Drosophila melanogaster} SCOP: b.118.1.1 b.118.1.1 Length = 324

 Score = 51.1 bits (122), Expect = 8e-08
 Identities = 29/156 (18%), Positives = 63/156 (40%), Gaps = 13/156 (8%)

Query: 44  KNGQFTTFIKLLISTQVANQIQSQINSSSEGMTVFAPTDNAFNNLEKGLLNNL--DNQKQ 101
           +NG    F ++++       +   INS +E +T+ AP++ A+       +NN+  D  K 
Sbjct: 20  ENGALRKFYEVIMDN--GGAVLDDINSLTE-VTILAPSNEAW---NSSNINNVLRDRNKM 73

Query: 102 VQLVLYHVTSKFYRQSDLL-LVSNPVRTLASGQDVWGLNFTGQGNQVNVSSGVVETPINS 160
            Q++  H+         +    +N +  + +  +   L F  +G   +    V    +N+
Sbjct: 74  RQILNMHIIKDRLNVDKIRQKNANLIAQVPTVNNNTFLYFNVRGEGSDTVITVEGGGVNA 133

Query: 161 -VLRQNFPLA---VYQVDKVLLPEELSAAKSPSAAP 192
            V++ +       V+ +D VL     +      + P
Sbjct: 134 TVIQADVAQTNGYVHIIDHVLGVPYTTVLGKLESDP 169

>1o70_A Fasciclin I, FAS I, FCN; cell adhesion, AXON guidance, extracellular module, genetic disorder, corneal dystrophy; HET: NAG; 2.6A {Drosophila melanogaster} SCOP: b.118.1.1 b.118.1.1 Length = 324

 Score = 49.6 bits (118), Expect = 2e-07
 Identities = 27/165 (16%), Positives = 50/165 (30%), Gaps = 21/165 (12%)

Query: 41  ILDKNGQFTTFIKLLISTQVANQIQSQINSSSEGMTVFAPTDNAFNNLEKG-------LL 93
            L+ +   +   K+   +        Q+N++    T F P D  +   E         L 
Sbjct: 164 KLESDPMMSDTYKMGKFSHFN----DQLNNTQRRFTYFVPRDKGWQKTELDYPSAHKKLF 219

Query: 94  NNLDNQKQVQLVLYHVTSKFYRQSDLLLVSNPVRTLASGQDVWGLNFTGQGNQVNVSSGV 153
               +     ++  H+       +   LV     +  SG  +          +V   +G 
Sbjct: 220 MADFSYHSKSILERHLAISDKEYTMKDLVK---FSQESGSVILPTFRDSLSIRVEEEAGR 276

Query: 154 VETPINS----VLRQNFPLA---VYQVDKVLLPEELSAAKSPSAA 191
                N     V R +       ++ +D  LL E+       SAA
Sbjct: 277 YVIIWNYKKINVYRPDVECTNGIIHVIDYPLLEEKDVVVAGGSAA 321

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	245
1w7d_A	137	Fasciclin-like protein; cell adhesion; NMR {Rhodob	99.96
2vxp_A	132	Transforming growth factor-beta-induced protein IG	99.95
1nyo_A	163	Immunogenic protein MPT70; seven-stranded beta-bar	99.95
1o70_A	324	Fasciclin I, FAS I, FCN; cell adhesion, AXON guida	99.9
1o70_A	324	Fasciclin I, FAS I, FCN; cell adhesion, AXON guida	99.9

>1w7d_A Fasciclin-like protein; cell adhesion; NMR {Rhodobacter sphaeroides} PDB: 1w7e_A

Probab=99.96  E-value=1e-29  Score=205.41  Aligned_cols=132  Identities=26%  Similarity=0.372  Sum_probs=113.9

Q ss_pred             CCCHHHHHhcCCChHHHHHHHHHcCchHHHhhcccCCCCCeEEEecCcHHHHhchhhhhhhc----cHHHHHHhhhhccc
Q 025959           35 PVNLTGILDKNGQFTTFIKLLISTQVANQIQSQINSSSEGMTVFAPTDNAFNNLEKGLLNNL----DNQKQVQLVLYHVT  110 (245)
Q Consensus        35 ~~nI~~iL~~~g~fS~F~~lL~~tgl~~~L~~~l~~s~~~~TVFAPTD~AF~~l~~~~l~~L----s~~~l~~LL~yHVi  110 (245)
                      +.||.++|++.++|++|.++|+++|+.+.|++     .++||||||+|+||++++.+.++.|    ++++++++|+|||+
T Consensus         2 ~~~i~~~l~~~~~~s~f~~~l~~agl~~~L~~-----~~~~TvFAPtn~Af~~l~~~~~~~l~~~~~~~~l~~lL~yHvv   76 (137)
T 1w7d_A            2 TGDIVETATGAGSFTTLLTAAEAAGLVDTLKG-----DGPFTVFAPTDAAFAALPEGTVEDLLKPENKEKLTEILTYHVV   76 (137)
T ss_dssp             CSTTGGGGGSCSSSTTTTHHHHHTTTHHHHTS-----SSCEEEECCCHHHHTTSTTTHHHHTTSHHHHHHHHHHHHHHEE
T ss_pred             CCCHHHHHHhCCCHHHHHHHHHHcCCHHHHcC-----CCCEEEEEECHHHHHHcCHhHHHHHhCcCCHHHHHHHHHhhEe
Confidence            57999999999999999999999999999987     6899999999999999988888887    45789999999999


Q ss_pred             ccccchhhhccCCcceeccCCCCceeEEEEEeecceEEEecceeeeeeeeccccCCCeEEEEECccccCCC
Q 025959          111 SKFYRQSDLLLVSNPVRTLASGQDVWGLNFTGQGNQVNVSSGVVETPINSVLRQNFPLAVYQVDKVLLPEE  181 (245)
Q Consensus       111 p~~~~~s~l~~~s~~v~T~~g~~~~~~LnVt~~g~~V~v~~gvv~a~V~n~~~~~~ngvIhvID~VLlP~~  181 (245)
                      ++.++.++|..+ ..++|+.|.    .|+|+.+++ ++|++    ++|...++...||+||+||+||+|+.
T Consensus        77 ~~~~~~~~l~~~-~~~~tl~G~----~l~v~~~~g-v~vn~----a~v~~~di~~~NGvIHvID~VL~P~s  137 (137)
T 1w7d_A           77 PGEVMSSDLTEG-MTAETVEGG----ALTVTLEGG-PKVNG----VSISQPDVDASNGVIHVIDGVLMPGA  137 (137)
T ss_dssp             ESCCCTTTSCSS-EEEECTTSC----EEEEECTTS-CEETT----EECSBCCCBCSSSEEEBCSSCCSSCC
T ss_pred             CcEEcHHHhcCC-CeeeccCCc----eEEEEecCC-EEEeC----cEEEECCeecCCeEEEEECeeeCCCC
Confidence            999999999876 468998875    367777777 88875    45555566678999999999999974

>2vxp_A Transforming growth factor-beta-induced protein IG-H3; RGD-containing collagen-associated protein, FAS1, BIGH3, vision, amyloid, RGD-CAP, secreted; 2.5A {Homo sapiens} PDB: 1x3b_A

Probab=99.95  E-value=4.8e-28  Score=194.37  Aligned_cols=129  Identities=19%  Similarity=0.298  Sum_probs=109.0

Q ss_pred             CCHHHHHhcCCChHHHHHHHHHcCchHHHhhcccCCCCCeEEEecCcHHHHhchhhhhhhc--cHHHHHHhhhhcccccc
Q 025959           36 VNLTGILDKNGQFTTFIKLLISTQVANQIQSQINSSSEGMTVFAPTDNAFNNLEKGLLNNL--DNQKQVQLVLYHVTSKF  113 (245)
Q Consensus        36 ~nI~~iL~~~g~fS~F~~lL~~tgl~~~L~~~l~~s~~~~TVFAPTD~AF~~l~~~~l~~L--s~~~l~~LL~yHVip~~  113 (245)
                      .||.++|+++++||+|.++++++|+.+.|++     .++||||||||+||++++.+.++.|  ++++++++|+|||+++.
T Consensus         2 ~ti~~~l~~~~~fs~~~~~l~~agl~~~L~~-----~~~~TvFAPtn~Af~~l~~~~~~~l~~~~~~l~~iL~yHvv~~~   76 (132)
T 2vxp_A            2 GTVMDVLKGDNRFSMLVAAIQSAGLTETLNR-----EGVYTVFAPTNEAFRALPPRERSRLLGDAKELANILKYHIGDEI   76 (132)
T ss_dssp             CCHHHHHTTSTTCHHHHHHHHHHTCHHHHHS-----SCCEEEEEECHHHHHHSCHHHHHHHHTCHHHHHHHHHHSBBSSC
T ss_pred             ccHHHHHHcCCCHHHHHHHHHHcCcHHHHcC-----CCCEEEEeECHHHHHhhCHHHHHHHhcCHHHHHHHHHhcCcCce
Confidence            4899999999999999999999999999987     7899999999999999998877776  56889999999999999


Q ss_pred             cchhhhccCCcceeccCCCCceeEEEEEeecceEEEecceeeeeeeeccccCCCeEEEEECcccc
Q 025959          114 YRQSDLLLVSNPVRTLASGQDVWGLNFTGQGNQVNVSSGVVETPINSVLRQNFPLAVYQVDKVLL  178 (245)
Q Consensus       114 ~~~s~l~~~s~~v~T~~g~~~~~~LnVt~~g~~V~v~~gvv~a~V~n~~~~~~ngvIhvID~VLl  178 (245)
                      ++.+++... ..++|+.|+    .|.|+.+++.++|++    ++|...++...||+||+||+||+
T Consensus        77 ~~~~~l~~~-~~~~tl~G~----~l~v~~~~~~v~vn~----a~v~~~di~a~NGvIHvID~VLl  132 (132)
T 2vxp_A           77 LVSGGIGAL-VRLKSLQGD----KLEVSLKNNVVSVNK----EPVAEPDIMATNGVVHVITNVLQ  132 (132)
T ss_dssp             CCSTTCSSC-EEEEBTTSS----EEEEEEETTEEEESS----CBEEEEEEEETTEEEEEESSCC-
T ss_pred             eehhhccCC-ceEecCCCC----EEEEEEeCCEEEEec----cEEEEcceecCCEEEEEECcEeC
Confidence            998888764 478999875    367777788888875    33434445567899999999985

>1nyo_A Immunogenic protein MPT70; seven-stranded beta-barrel, fasciclin domain, structural genomics, PSI, protein structure initiative; NMR {Mycobacterium tuberculosis} SCOP: b.118.1.1

Probab=99.95  E-value=5.6e-28  Score=201.10  Aligned_cols=131  Identities=24%  Similarity=0.395  Sum_probs=112.9

Q ss_pred             CCCCHHHHHhcCCChHHHHHHHH-----HcCchHHHhhcccCCCCCeEEEecCcHHHHhchhhhhhhcc--HHHHHHhhh
Q 025959           34 GPVNLTGILDKNGQFTTFIKLLI-----STQVANQIQSQINSSSEGMTVFAPTDNAFNNLEKGLLNNLD--NQKQVQLVL  106 (245)
Q Consensus        34 ~~~nI~~iL~~~g~fS~F~~lL~-----~tgl~~~L~~~l~~s~~~~TVFAPTD~AF~~l~~~~l~~Ls--~~~l~~LL~  106 (245)
                      ...+|.++|+++++||+|.++|+     ++|+.+.|+.     .+ ||||||||+||++++.+.++.|.  +++++++|+
T Consensus        26 ~~~~i~~~l~~~~~~s~f~~~l~~~~~~~agl~~~L~~-----~g-~TvFAPtn~AF~~l~~~~~~~L~~~~~~L~~iL~   99 (163)
T 1nyo_A           26 SQDPVAVAASNNPELTTLTAALSGQLNPQVNLVDTLNS-----GQ-YTVFAPTNAAFSKLPASTIDELKTNSSLLTSILT   99 (163)
T ss_dssp             HHSCHHHHHTTSTTTHHHHHHHHSSSCTTCCCHHHHTS-----SS-EEECCBCHHHHHHSCHHHHHHHTTCSSHHHHHHH
T ss_pred             CCcCHHHHHHhCCCHHHHHHHHHhccccccCHHHHhCC-----CC-cEEEEECHHHHHhccHHHHHHHhcCHHHHHHHHH
Confidence            35799999999999999999999     9999999986     56 99999999999999887788874  478999999


Q ss_pred             hcccccccchhhhccCCcceeccCCCCceeEEEEEeecceEEEecceeeeeeeeccccCCCeEEEEECccccCCC
Q 025959          107 YHVTSKFYRQSDLLLVSNPVRTLASGQDVWGLNFTGQGNQVNVSSGVVETPINSVLRQNFPLAVYQVDKVLLPEE  181 (245)
Q Consensus       107 yHVip~~~~~s~l~~~s~~v~T~~g~~~~~~LnVt~~g~~V~v~~gvv~a~V~n~~~~~~ngvIhvID~VLlP~~  181 (245)
                      |||+++.++.++|.   +.++|+.|.    .|+|+.+++.++|++    ++|...++...||+||+||+||+|+.
T Consensus       100 yHvv~g~~~~~~l~---g~~~Tl~G~----~l~v~~~~~~v~vn~----a~V~~~di~a~NGvIHvID~VL~P~~  163 (163)
T 1nyo_A          100 YHVVAGQTSPANVV---GTRQTLQGA----SVTVTGQGNSLKVGN----ADVVCGGVSTANATVYMIDSVLMPPA  163 (163)
T ss_dssp             HTEEESCCCTTTSC---EEEECTTSS----EEEEEECSSCEEETT----EECSSBCCCCSSEEEBCBSSCCCCCC
T ss_pred             hceECCEEcHHHhC---CccccCCCC----EEEEEEECCEEEEec----cEEEECceEcCCEEEEEECcEeCCCC
Confidence            99999999999997   479999864    367777777888875    45555566778999999999999974

>1o70_A Fasciclin I, FAS I, FCN; cell adhesion, AXON guidance, extracellular module, genetic disorder, corneal dystrophy; HET: NAG; 2.6A {Drosophila melanogaster} SCOP: b.118.1.1 b.118.1.1

Probab=99.90  E-value=4.3e-24  Score=194.01  Aligned_cols=144  Identities=13%  Similarity=0.133  Sum_probs=114.3

Q ss_pred             CCCHHHHHhcCCChHHHHHHHHHcCchHHHhhcccCCCCCeEEEecCcHHHHhch----hhhhhhccH---HHHHHhhhh
Q 025959           35 PVNLTGILDKNGQFTTFIKLLISTQVANQIQSQINSSSEGMTVFAPTDNAFNNLE----KGLLNNLDN---QKQVQLVLY  107 (245)
Q Consensus        35 ~~nI~~iL~~~g~fS~F~~lL~~tgl~~~L~~~l~~s~~~~TVFAPTD~AF~~l~----~~~l~~Ls~---~~l~~LL~y  107 (245)
                      +.++.++|+++++|++|.++++.+|+.++|++    ..++||||||||+||++++    .+.++.|..   ++++++|+|
T Consensus       158 ~~ti~~~l~~~~~fs~~~~~l~~~gl~~~L~~----~~~~~TvFAPtd~Af~~l~~~~~~~~~~~l~~~~~~~l~~iL~y  233 (324)
T 1o70_A          158 YTTVLGKLESDPMMSDTYKMGKFSHFNDQLNN----TQRRFTYFVPRDKGWQKTELDYPSAHKKLFMADFSYHSKSILER  233 (324)
T ss_dssp             CSCHHHHHHHCGGGHHHHHHTTTTTTTGGGGC----SSSEEEEEEECHHHHHHHHHHCHHHHHHHTSGGGHHHHHHHHHT
T ss_pred             hhhHHHHhhcCchHHHHHHHHHhhCHHHHhCC----CCCCeEEEEeChHHHHhhhhhchhHHHHHhccCcHHHHHHHHHh
Confidence            46899999999999999999999999888863    3689999999999999985    334555543   489999999


Q ss_pred             ccccc--ccchhhhccCCc-----ceeccCCCCceeEEEEEeecceEEEecceeeeeeeeccccCCCeEEEEECccccCC
Q 025959          108 HVTSK--FYRQSDLLLVSN-----PVRTLASGQDVWGLNFTGQGNQVNVSSGVVETPINSVLRQNFPLAVYQVDKVLLPE  180 (245)
Q Consensus       108 HVip~--~~~~s~l~~~s~-----~v~T~~g~~~~~~LnVt~~g~~V~v~~gvv~a~V~n~~~~~~ngvIhvID~VLlP~  180 (245)
                      ||+++  .|+.++|.++++     .++|++ +  .+.++++.+|+.++|+.+...++|...++...||+||+||+||+|+
T Consensus       234 Hvv~~~~~~~~~~l~~~~~~~~~~~~~Tl~-~--~l~v~~~~~~~~v~v~~~~~~a~v~~~di~~~NGvIHvID~VL~P~  310 (324)
T 1o70_A          234 HLAISDKEYTMKDLVKFSQESGSVILPTFR-D--SLSIRVEEEAGRYVIIWNYKKINVYRPDVECTNGIIHVIDYPLLEE  310 (324)
T ss_dssp             TEEEESSCCCHHHHHHHHHHSSSEEEECSS-S--EEEEEEEEETTEEEEEETTEEEEEEEEEEEETTEEEEEESSCSCCT
T ss_pred             cEeCCcceEcHHHHhhhccCCCeeeeeccC-C--cEEEEEEecCCEEEEEecCceeEEEEcccccCCCeEEEeceeecCC
Confidence            99998  888899976432     388987 4  3777776678888887444456665556666799999999999999


Q ss_pred             CCCCC
Q 025959          181 ELSAA  185 (245)
Q Consensus       181 ~l~~~  185 (245)
                      .....
T Consensus       311 ~~~~~  315 (324)
T 1o70_A          311 KDVVV  315 (324)
T ss_dssp             TTTC-
T ss_pred             ccccc
Confidence            86543

>1o70_A Fasciclin I, FAS I, FCN; cell adhesion, AXON guidance, extracellular module, genetic disorder, corneal dystrophy; HET: NAG; 2.6A {Drosophila melanogaster} SCOP: b.118.1.1 b.118.1.1

Probab=99.90  E-value=9e-24  Score=191.87  Aligned_cols=139  Identities=22%  Similarity=0.310  Sum_probs=106.5

Q ss_pred             CCCCHHHHHh------cCCChHHHHHHHHHcC--chHHHhhcccCCCCCeEEEecCcHHHHhchhhhhhhc--cHHHHHH
Q 025959           34 GPVNLTGILD------KNGQFTTFIKLLISTQ--VANQIQSQINSSSEGMTVFAPTDNAFNNLEKGLLNNL--DNQKQVQ  103 (245)
Q Consensus        34 ~~~nI~~iL~------~~g~fS~F~~lL~~tg--l~~~L~~~l~~s~~~~TVFAPTD~AF~~l~~~~l~~L--s~~~l~~  103 (245)
                      ...||+++|+      +.++||+|.++|+++|  +.+.|++     .++||||||+|+||+++.   ++.|  +++.+++
T Consensus         4 ~~~~i~~~L~~~~~~~~~~~~s~~~~~l~~ag~~l~~~L~~-----~~~~TvFAPtn~Af~~~~---~~~l~~~~~~l~~   75 (324)
T 1o70_A            4 ADTTVTQFLQSFKENAENGALRKFYEVIMDNGGAVLDDINS-----LTEVTILAPSNEAWNSSN---INNVLRDRNKMRQ   75 (324)
T ss_dssp             ---------------CCHHHHHHHHHHHHHTCSHHHHHHHT-----CSSEEEEEECHHHHHHTC---THHHHTCHHHHHH
T ss_pred             ehhhHHHHHHHHHhhhcCCcHHHHHHHHHHHhHHHHHHHcC-----CCCeEEEEEChHhhhccc---HhhhhCCHHHHHH
Confidence            4678999998      6789999999999999  9999987     789999999999998763   3444  5688999


Q ss_pred             hhhhcccccccchhhhccCCc----ceeccCCCCceeEEEEEee--cceEEEecceeeeeeeeccccCCCeEEEEECccc
Q 025959          104 LVLYHVTSKFYRQSDLLLVSN----PVRTLASGQDVWGLNFTGQ--GNQVNVSSGVVETPINSVLRQNFPLAVYQVDKVL  177 (245)
Q Consensus       104 LL~yHVip~~~~~s~l~~~s~----~v~T~~g~~~~~~LnVt~~--g~~V~v~~gvv~a~V~n~~~~~~ngvIhvID~VL  177 (245)
                      +|+|||++++++.++|..+.+    .++|+.|+. .++++++.+  +..+++++|.++++|...++...||+||+||+||
T Consensus        76 iL~yHvv~g~~~~~~l~~~~~~~~~~~~Tl~g~~-~l~~~v~~~~~~~~v~v~~g~~~a~v~~~di~~~NGvIhvID~VL  154 (324)
T 1o70_A           76 ILNMHIIKDRLNVDKIRQKNANLIAQVPTVNNNT-FLYFNVRGEGSDTVITVEGGGVNATVIQADVAQTNGYVHIIDHVL  154 (324)
T ss_dssp             HHHHTEESSCCCHHHHHHHTSSSCCCEEBSSTTC-EEEEEEESCGGGCEEEEEETTEEEEEEEEEEECSSEEEEEESSCT
T ss_pred             HHHhcEeCCeecHHHHhhccCCCceEEEcCCCCc-eEEEEEeecCCceEEEEcCCceeEEEEeccccccCcEEEEEchhh
Confidence            999999999999999986532    689998764 256777653  3468887766677887777788899999999999


Q ss_pred             cCCC
Q 025959          178 LPEE  181 (245)
Q Consensus       178 lP~~  181 (245)
                      .|+.
T Consensus       155 ~pp~  158 (324)
T 1o70_A          155 GVPY  158 (324)
T ss_dssp             TSCC
T ss_pred             hhch
Confidence            9864

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	245
d1o70a1	140	b.118.1.1 (A:328-467) Fasciclin I {Fruit fly (Dros	9e-14
d1o70a2	157	b.118.1.1 (A:468-624) Fasciclin I {Fruit fly (Dros	5e-11
d1nyoa_	163	b.118.1.1 (A:) Immunogenic protein MPT70 {Mycobact	5e-06

>d1o70a1 b.118.1.1 (A:328-467) Fasciclin I {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 140

class: All beta proteins
fold: FAS1 domain
superfamily: FAS1 domain
family: FAS1 domain
domain: Fasciclin I
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 64.4 bits (156), Expect = 9e-14
 Identities = 25/141 (17%), Positives = 50/141 (35%), Gaps = 9/141 (6%)

Query: 44  KNGQFTTFIKLLISTQVANQIQSQINSSSEGMTVFAPTDNAFNNLEKGLLNNLDNQKQVQ 103
           +NG    F ++++       +   INS    +T+ AP++ A+N+     +   D  K  Q
Sbjct: 2   ENGALRKFYEVIMDN--GGAVLDDINSL-TEVTILAPSNEAWNSSNINNVLR-DRNKMRQ 57

Query: 104 LVLYHVTSKFYRQSDLLLVSNPVRTLA---SGQDVWGLNFTGQG--NQVNVSSGVVETPI 158
           ++  H+         +   +  +       +       N  G+G    + V  G V   +
Sbjct: 58  ILNMHIIKDRLNVDKIRQKNANLIAQVPTVNNNTFLYFNVRGEGSDTVITVEGGGVNATV 117

Query: 159 NSVLRQNFPLAVYQVDKVLLP 179
                      V+ +D VL  
Sbjct: 118 IQADVAQTNGYVHIIDHVLGV 138

>d1o70a2 b.118.1.1 (A:468-624) Fasciclin I {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 157

class: All beta proteins
fold: FAS1 domain
superfamily: FAS1 domain
family: FAS1 domain
domain: Fasciclin I
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 57.2 bits (137), Expect = 5e-11
 Identities = 20/156 (12%), Positives = 48/156 (30%), Gaps = 18/156 (11%)

Query: 39  TGILDK---NGQFTTFIKLLISTQVANQIQSQINSSSEGMTVFAPTDNAFNNLEKGLLNN 95
           T +L K   +   +   K+   +   +Q+    N++    T F P D  +   E    + 
Sbjct: 1   TTVLGKLESDPMMSDTYKMGKFSHFNDQL----NNTQRRFTYFVPRDKGWQKTELDYPSA 56

Query: 96  LDN-------QKQVQLVLYHVTSKFYRQSDLLLVS----NPVRTLASGQDVWGLNFTGQG 144
                          ++  H+       +   LV     +    L + +D   +    + 
Sbjct: 57  HKKLFMADFSYHSKSILERHLAISDKEYTMKDLVKFSQESGSVILPTFRDSLSIRVEEEA 116

Query: 145 NQVNVSSGVVETPINSVLRQNFPLAVYQVDKVLLPE 180
            +  +     +  +     +     ++ +D  LL E
Sbjct: 117 GRYVIIWNYKKINVYRPDVECTNGIIHVIDYPLLEE 152

>d1nyoa_ b.118.1.1 (A:) Immunogenic protein MPT70 {Mycobacterium tuberculosis [TaxId: 1773]} Length = 163

class: All beta proteins
fold: FAS1 domain
superfamily: FAS1 domain
family: FAS1 domain
domain: Immunogenic protein MPT70
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 43.2 bits (101), Expect = 5e-06
 Identities = 33/155 (21%), Positives = 60/155 (38%), Gaps = 14/155 (9%)

Query: 27  AQAPAPAGPVNLTGILDKNGQFTTFIKLLISTQVANQIQSQINSSSEGMTVFAPTDNAFN 86
             +        +      N + TT    L S Q+  Q+      +S   TVFAPT+ AF+
Sbjct: 19  PASVQGMSQDPVAVAASNNPELTTLTAAL-SGQLNPQVNLVDTLNSGQYTVFAPTNAAFS 77

Query: 87  NLEKGLLNNL--DNQKQVQLVLYHVTSKFYRQSDLLLVSNPVRTLASGQDVWGLNFTGQG 144
            L    ++ L  ++     ++ YHV +     ++++     ++  +      G +     
Sbjct: 78  KLPASTIDELKTNSSLLTSILTYHVVAGQTSPANVVGTRQTLQGASVTVTGQGNSLK--V 135

Query: 145 NQVNVSSGVVETPINSVLRQNFPLAVYQVDKVLLP 179
              +V  G V T  N+         VY +D VL+P
Sbjct: 136 GNADVVCGGVSTA-NAT--------VYMIDSVLMP 161

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	245
d1nyoa_	163	Immunogenic protein MPT70 {Mycobacterium tuberculo	99.92
d1o70a2	157	Fasciclin I {Fruit fly (Drosophila melanogaster) [	99.89
d1o70a1	140	Fasciclin I {Fruit fly (Drosophila melanogaster) [	99.89

>d1nyoa_ b.118.1.1 (A:) Immunogenic protein MPT70 {Mycobacterium tuberculosis [TaxId: 1773]}

class: All beta proteins
fold: FAS1 domain
superfamily: FAS1 domain
family: FAS1 domain
domain: Immunogenic protein MPT70
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.92  E-value=3.7e-26  Score=188.68  Aligned_cols=130  Identities=25%  Similarity=0.374  Sum_probs=109.1

Q ss_pred             CCCHHHHHhcCCChHHHHHHHH-----HcCchHHHhhcccCCCCCeEEEecCcHHHHhchhhhhhhcc--HHHHHHhhhh
Q 025959           35 PVNLTGILDKNGQFTTFIKLLI-----STQVANQIQSQINSSSEGMTVFAPTDNAFNNLEKGLLNNLD--NQKQVQLVLY  107 (245)
Q Consensus        35 ~~nI~~iL~~~g~fS~F~~lL~-----~tgl~~~L~~~l~~s~~~~TVFAPTD~AF~~l~~~~l~~Ls--~~~l~~LL~y  107 (245)
                      ..+|.+.++++++||+|..+++     ++||.+.|+      .++||||||||+||++++.+.++.|.  +++|+++|+|
T Consensus        27 ~~~v~~~a~~~p~lstl~~Al~a~~~~~a~L~~~L~------~gpfTvFAPtn~AF~~l~~~~~~~l~~~~~~L~~iL~y  100 (163)
T d1nyoa_          27 QDPVAVAASNNPELTTLTAALSGQLNPQVNLVDTLN------SGQYTVFAPTNAAFSKLPASTIDELKTNSSLLTSILTY  100 (163)
T ss_dssp             HSCHHHHHTTSTTTHHHHHHHHSSSCTTCCCHHHHT------SSSEEECCBCHHHHHHSCHHHHHHHTTCSSHHHHHHHH
T ss_pred             cchHHHHHhcCCchHHHHHHHhhccccccchhHhhc------CCCeEEEEECcHHHHhcCHHHHHhhhhhHHHHHHhhhh
Confidence            3579999999999999999998     479999986      37899999999999999988888774  4689999999


Q ss_pred             cccccccchhhhccCCcceeccCCCCceeEEEEEeecceEEEecceeeeeeeeccccCCCeEEEEECccccCCC
Q 025959          108 HVTSKFYRQSDLLLVSNPVRTLASGQDVWGLNFTGQGNQVNVSSGVVETPINSVLRQNFPLAVYQVDKVLLPEE  181 (245)
Q Consensus       108 HVip~~~~~s~l~~~s~~v~T~~g~~~~~~LnVt~~g~~V~v~~gvv~a~V~n~~~~~~ngvIhvID~VLlP~~  181 (245)
                      ||++++++.+++..   .++|+.|+    .|.|+.+++.++|++    ++|...++...||+||+||+||+||.
T Consensus       101 HVv~g~~~~~~l~~---~~~Tl~G~----~l~v~~~~~~i~v~~----a~Vv~~di~a~NGvIHvID~VLlPPa  163 (163)
T d1nyoa_         101 HVVAGQTSPANVVG---TRQTLQGA----SVTVTGQGNSLKVGN----ADVVCGGVSTANATVYMIDSVLMPPA  163 (163)
T ss_dssp             TEEESCCCTTTSCE---EEECTTSS----EEEEEECSSCEEETT----EECSSBCCCCSSEEEBCBSSCCCCCC
T ss_pred             hhhhhhhhhhhhhh---hhhhccCc----ceeEEecCCEEEEec----eEEEECCeecCCcEEEEECccccCCC
Confidence            99999999999853   58898865    367777778888865    44555566778999999999999984

>d1o70a2 b.118.1.1 (A:468-624) Fasciclin I {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: All beta proteins
fold: FAS1 domain
superfamily: FAS1 domain
family: FAS1 domain
domain: Fasciclin I
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.89  E-value=1.1e-23  Score=170.30  Aligned_cols=139  Identities=12%  Similarity=0.101  Sum_probs=102.2

Q ss_pred             CCHHHHHhcCCChHHHHHHHHHcCchHHHhhcccCCCCCeEEEecCcHHHHhchhhhh----hhc---cHHHHHHhhhhc
Q 025959           36 VNLTGILDKNGQFTTFIKLLISTQVANQIQSQINSSSEGMTVFAPTDNAFNNLEKGLL----NNL---DNQKQVQLVLYH  108 (245)
Q Consensus        36 ~nI~~iL~~~g~fS~F~~lL~~tgl~~~L~~~l~~s~~~~TVFAPTD~AF~~l~~~~l----~~L---s~~~l~~LL~yH  108 (245)
                      .+|.++|+.+++|+.|+++++.+|+.++|++    ..++||||||+|+||+++.....    +.+   .++.++++|+||
T Consensus         1 ~Ti~~~l~~~p~ls~~~~~~~~s~l~~~L~~----~~~~~TvFaPtn~Af~~l~~~~~~~~~~~~~~~~~~~l~~il~~H   76 (157)
T d1o70a2           1 TTVLGKLESDPMMSDTYKMGKFSHFNDQLNN----TQRRFTYFVPRDKGWQKTELDYPSAHKKLFMADFSYHSKSILERH   76 (157)
T ss_dssp             SCHHHHHHHCGGGHHHHHHTTTTTTTGGGGC----SSSEEEEEEECHHHHHHHHHHCHHHHHHHTSGGGHHHHHHHHHTT
T ss_pred             CcHHHHHHhCccHHHHHHHHHhCCHHHHHhC----CCCceEEEecCHHHHHHhhhhccchhhhhcCcccHHHHHHHheeE
Confidence            3789999999999999999999999998876    36789999999999999864322    222   256789999999


Q ss_pred             ccccccchhh--hc-----cCCcceeccCCCCceeEEEEEeecceEEEecceeeeeeeeccccCCCeEEEEECccccCCC
Q 025959          109 VTSKFYRQSD--LL-----LVSNPVRTLASGQDVWGLNFTGQGNQVNVSSGVVETPINSVLRQNFPLAVYQVDKVLLPEE  181 (245)
Q Consensus       109 Vip~~~~~s~--l~-----~~s~~v~T~~g~~~~~~LnVt~~g~~V~v~~gvv~a~V~n~~~~~~ngvIhvID~VLlP~~  181 (245)
                      |+++.....+  +.     ......+|+. +.  +.+++...++.+.+......++|...++...||+||+||+||+|+.
T Consensus        77 iv~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~a~V~~~Di~a~NGviHvID~VLlp~~  153 (157)
T d1o70a2          77 LAISDKEYTMKDLVKFSQESGSVILPTFR-DS--LSIRVEEEAGRYVIIWNYKKINVYRPDVECTNGIIHVIDYPLLEEK  153 (157)
T ss_dssp             EEEESSCCCHHHHHHHHHHSSSEEEECSS-SE--EEEEEEEETTEEEEEETTEEEEEEEEEEEETTEEEEEESSCSCCTT
T ss_pred             EecccccchhhhhhhhhccCCceeEEecC-Cc--EEEEEEcCCcEEEEecCCccceEEECCEecCCeEEEEECceecCCC
Confidence            9998543332  21     1112244543 32  5667666666666554444677777777788999999999999964

>d1o70a1 b.118.1.1 (A:328-467) Fasciclin I {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: All beta proteins
fold: FAS1 domain
superfamily: FAS1 domain
family: FAS1 domain
domain: Fasciclin I
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.89  E-value=1.2e-23  Score=166.70  Aligned_cols=130  Identities=21%  Similarity=0.267  Sum_probs=99.3

Q ss_pred             cCCChHHHHHHHHHcC--chHHHhhcccCCCCCeEEEecCcHHHHhchhhhhhhccHHHHHHhhhhcccccccchhhhcc
Q 025959           44 KNGQFTTFIKLLISTQ--VANQIQSQINSSSEGMTVFAPTDNAFNNLEKGLLNNLDNQKQVQLVLYHVTSKFYRQSDLLL  121 (245)
Q Consensus        44 ~~g~fS~F~~lL~~tg--l~~~L~~~l~~s~~~~TVFAPTD~AF~~l~~~~l~~Ls~~~l~~LL~yHVip~~~~~s~l~~  121 (245)
                      ++++|++|+++|+++|  +.++|++     .++||||||||+||+++....+. .++++++++|+|||+++.++.++|..
T Consensus         2 ~~~~~~~f~~~i~~~g~~~~~~l~~-----~~~~TvFAPtn~Af~~~~~~~~~-~~~~~l~~~l~yHiv~~~~~~~~l~~   75 (140)
T d1o70a1           2 ENGALRKFYEVIMDNGGAVLDDINS-----LTEVTILAPSNEAWNSSNINNVL-RDRNKMRQILNMHIIKDRLNVDKIRQ   75 (140)
T ss_dssp             CHHHHHHHHHHHHHTCSHHHHHHHT-----CSSEEEEEECHHHHHHTCTHHHH-TCHHHHHHHHHHTEESSCCCHHHHHH
T ss_pred             CCccHHHHHHHHHHHHHHHHHHhcC-----CCCEEEEEECHHHHhcCChhhhc-CCHHHHHHHHHhhccCCeEEHHHHhc
Confidence            4668999999999987  5677776     68899999999999987654331 25678999999999999999999975


Q ss_pred             CC----cceeccCCCCceeEEEEEeec--ceEEEecceeeeeeeeccccCCCeEEEEECccccCC
Q 025959          122 VS----NPVRTLASGQDVWGLNFTGQG--NQVNVSSGVVETPINSVLRQNFPLAVYQVDKVLLPE  180 (245)
Q Consensus       122 ~s----~~v~T~~g~~~~~~LnVt~~g--~~V~v~~gvv~a~V~n~~~~~~ngvIhvID~VLlP~  180 (245)
                      ..    ..++|+.++.. +.++++.++  ..+.+..+...++|...++...|||||+||+||.||
T Consensus        76 ~~~~~~~~~~t~~g~~~-~~~~~~~~~~~~~~~~~~~~~~a~V~~~Di~~~NGvIH~ID~VL~~P  139 (140)
T d1o70a1          76 KNANLIAQVPTVNNNTF-LYFNVRGEGSDTVITVEGGGVNATVIQADVAQTNGYVHIIDHVLGVP  139 (140)
T ss_dssp             HTSSSCCCEEBSSTTCE-EEEEEESCGGGCEEEEEETTEEEEEEEEEEECSSEEEEEESSCTTSC
T ss_pred             CcccCceEeeecCCCce-EEEEEeccceeEEEEecCCcceEEEEeCCEecCCeEEEEECCccCCc
Confidence            42    24778877642 444554433  234444455667777777888899999999999997