Citrus Sinensis ID: 026298

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240
Protein Sequence
MFRITKSKPLEYLSHQFLQKCSASGTPKGKAKMKAGQQLKRSKITTKKGSSPAKGAKAHAPDEKQRLYDQCLNAPTPVRFLTPKDKKREIEREKLGLISKDRQREIDILKKGGKQAMGISDEPMIMGTPGMDLISLGLVDADKIPKYELTAEDGKRLAKECSRVLMRRHRARQAAESTLLRLKKEAIEALPEDLKKAALVPDLTPFPVNRFMATLTPPIEGYMEKVREATRRSSGNEKMR
Secondary Structure (PSIPRED)
ccccccccccccHHHHHHHHHcccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHccccccccccccHHHHHHHHHHHcccHHHHHHHHHHHHHcccccccccccccccccccccHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHcccccccccccccccccccccccHHHHHHHHHHHHHcccccc
Secondary Structure Prediction (SSPRO)
ccEEccccccccccHHHHEEccccccccccHHHcccccccccEEEEEcccccccccccccHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHccccHHHHHHHHHHHccccHHcccccccEEEccccccEEEEccccHccccccEEEccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHcccccccccccccHccccccccHHHHHHHHHHHHHccHHHcc
Coil and Loop (DISEMBL)
mfritkskpleyLSHQFLQkcsasgtpkgkakMKAGQQLKRskittkkgsspakgakahapdekQRLYDqclnaptpvrfltpkdkkrEIEREKLGLISKDRQREIDILKKGgkqamgisdepmimgtpgmdlislglvdadkipkyeltAEDGKRLAKECSRVLMRRHRARQAAESTLLRLKKEAIEALPEDLkkaalvpdltpfpvnrfmatltppiegYMEKVREATrrssgnekmr
Flexible Loop (DISEMBL)
mfritkskpleylsHQFLQKCSasgtpkgkakmkagqqlkrskittkkgsspakgakahapdeKQRLYDQclnaptpvrfltpkdkkreiereklgliskdrqreidilkkggkqamgisDEPMIMGTPGMDLISLGLVDADKIPKyeltaedgkrLAKECSRVLMRRHRARQAAESTLLRLKKEAIEALPEDLKKAalvpdltpfpvnrFMATltppiegymekvreatrrssgnekmr
Low Complexity Region (SEG)
MFRITKSKPLEYLSHQFLQKCSASGTPKGKAKMKAGQQLKRSKITTkkgsspakgakahapDEKQRLYDQCLNAPTPVRFLTPKDKKREIEREKLGLISKDRQREIDILKKGGKQAMGISDEPMIMGTPGMDLISLGLVDADKIPKYELTAEDGKRLAKECSRVLMRRHRARQAAESTLLRLKKEAIEALPEDLKKAALVPDLTPFPVNRFMATLTPPIEGYMEKVREATRRSSGNEKMR
Disordered region (IsUnstruct)
**********************************************************************CL****************************************************IMGTPGMDLISLGLVDADKIPKYELTAE****LA*ECSRVL*************LLRLKKEAIEALPEDLKKAALVPDLTPFPVNRFMATLTPPIEG*******************
Disordered Region (DISOPRED)
**********************************************************************CLNAPTP***************************************************PGMDLISLGLVDADKIP**********RLAKECSR**M*******AAESTLLRLKKEAIEALPEDLKKAALVPDLTPFPVNRFMATLTPPIEGYME****************
Disordered Region (DISEMBL)
MFRITKSKPLEYLSHQFLQKCSA****************************************KQRLYDQCLNAPTPVRFLTPKDKKREIEREKLGLISKDRQREIDILKKGGKQAMGISDEPMIMGTPGMDLISLGLVDADKIPKYELTAEDGKRLAKECSRVLMRRHRARQAAESTLLRLKKEAIEALPEDLKKAALVPDLTPFPVNRFMATLTPPIEGYMEKVR*************
Disordered Region (DISPRO)
MFRITKSKPLEYLSHQFLQKCSASG************QLKRSKITTKKGS***********DEKQRLYDQCLNAPTPVRFLTPKDKKREIEREKLGLISKDRQREIDILKKGGKQAMGISDEPMIMGTPGMDLISLGLVDADKIPKYELTAEDGKRLAKECSRVLMRRHRARQAAESTLLRLKKEAIEALPEDLKKAALVPDLTPFPVNRFMATLTPPIEGYMEKVREATRRS*******
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
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Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MFRITKSKPLEYLSHQFLQKCSASGTPKGKAKMKAGQQLKRSKITTKKGSSPAKGAKAHAPDEKQRLYDQCLNAPTPVRFLTPKDKKREIEREKLGLISKDRQREIDILKKGGKQAMGISDEPMIMGTPGMDLISLGLVDADKIPKYELTAEDGKRLAKECSRVLMRRHRARQAAESTLLRLKKEAIEALPEDLKKAALVPDLTPFPVNRFMATLTPPIEGYMEKVREATRRSSGNEKMR
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	240
224116714	243	predicted protein [Populus trichocarpa]	0.991	0.979	0.661	7e-86
255564403	244	conserved hypothetical protein [Ricinus	0.995	0.979	0.689	9e-86
297809741	252	hypothetical protein ARALYDRAFT_490185 [	1.0	0.952	0.630	3e-83
15235571	250	copper ion binding protein [Arabidopsis	1.0	0.96	0.628	1e-82
449432078	247	PREDICTED: uncharacterized protein LOC10	0.995	0.967	0.649	2e-81
225454424	244	PREDICTED: uncharacterized protein LOC10	0.995	0.979	0.665	9e-81
307136356	247	hypothetical protein [Cucumis melo subsp	0.995	0.967	0.669	3e-80
356520332	239	PREDICTED: uncharacterized protein LOC10	0.991	0.995	0.663	8e-80
358346296	243	hypothetical protein MTR_077s0016 [Medic	0.987	0.975	0.662	3e-79
358347548	367	hypothetical protein MTR_103s0045 [Medic	0.983	0.643	0.648	4e-79

>gi|224116714|ref|XP_002317373.1| predicted protein [Populus trichocarpa] gi|222860438|gb|EEE97985.1| predicted protein [Populus trichocarpa]

 Score =  322 bits (826), Expect = 7e-86,   Method: Compositional matrix adjust.
 Identities = 162/245 (66%), Positives = 195/245 (79%), Gaps = 7/245 (2%)

Query: 1   MFRITKSK-PLEYLSHQFLQKCSASGTPKGKAKMKAGQQLKRSKITTKK----GSSPAKG 55
           M RIT+++ PL+ L+HQFLQ+CS SGT KGK K   G   KRSK+TT K    GS     
Sbjct: 1   MLRITRTQQPLQSLTHQFLQRCSVSGTSKGKGK--DGVAKKRSKVTTNKNKKSGSQDPSR 58

Query: 56  AKAHAPDEKQRLYDQCLNAPTPVRFLTPKDKKREIEREKLGLISKDRQREIDILKKGGKQ 115
           + +    E+ RLYDQC+NAP PVR+L PKD+ RE EREK+GL+SKDR RE +ILKKGG+Q
Sbjct: 59  SFSRQDSERNRLYDQCINAPAPVRYLKPKDRAREAEREKMGLLSKDRIREKEILKKGGRQ 118

Query: 116 AMGISDEPMIMGTPGMDLISLGLVDADKIPKYELTAEDGKRLAKECSRVLMRRHRARQAA 175
           AMG+ DEPMI+GTPG+DLISLGLVD DKIPKYELT EDG +LAKE SRVLMR+HRARQAA
Sbjct: 119 AMGVPDEPMIIGTPGLDLISLGLVDVDKIPKYELTEEDGMKLAKEYSRVLMRKHRARQAA 178

Query: 176 ESTLLRLKKEAIEALPEDLKKAALVPDLTPFPVNRFMATLTPPIEGYMEKVREATRRSSG 235
            +  L+ K EAIEALPE+LKKAAL+PDLTPFP + FMATLTPPIEGY EK+ EA ++S+G
Sbjct: 179 LTNCLKCKNEAIEALPENLKKAALIPDLTPFPASSFMATLTPPIEGYSEKINEAAKKSAG 238

Query: 236 NEKMR 240
            +K+R
Sbjct: 239 MQKIR 243

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255564403|ref|XP_002523198.1| conserved hypothetical protein [Ricinus communis] gi|223537605|gb|EEF39229.1| conserved hypothetical protein [Ricinus communis]

 Score =  322 bits (825), Expect = 9e-86,   Method: Compositional matrix adjust.
 Identities = 169/245 (68%), Positives = 205/245 (83%), Gaps = 6/245 (2%)

Query: 1   MFRITK--SKPLEYLSHQFLQKCSASGTPKGKAKMKAGQQLKRSKITTK---KGSSPAKG 55
           M+RI +  +  L+ +++QF Q+CS SGT KGK+K K GQ  K++K+TTK   KG  P+  
Sbjct: 1   MYRIPRPATSLLKSVTYQFGQRCSVSGTAKGKSKTKDGQPKKKNKVTTKKGPKGQDPSAQ 60

Query: 56  AKAHAPDEKQRLYDQCLNAPTPVRFLTPKDKKREIEREKLGLISKDRQREIDILKKGGKQ 115
           + +H    K  L++QCLNAPTPVRFL PK++ RE ER+KLGL SK+RQRE +I+KKGG+Q
Sbjct: 61  SPSHQ-SAKNNLFEQCLNAPTPVRFLKPKEQAREAERQKLGLESKERQREKEIIKKGGRQ 119

Query: 116 AMGISDEPMIMGTPGMDLISLGLVDADKIPKYELTAEDGKRLAKECSRVLMRRHRARQAA 175
           AMG+ DEP++MGTPG DLI+LGLVDA+KIPKYEL  EDGKRLAKE SRVLMR+HRARQAA
Sbjct: 120 AMGVPDEPLMMGTPGFDLIALGLVDAEKIPKYELNEEDGKRLAKEYSRVLMRKHRARQAA 179

Query: 176 ESTLLRLKKEAIEALPEDLKKAALVPDLTPFPVNRFMATLTPPIEGYMEKVREATRRSSG 235
           ESTLLRLKKEAI+ALP+ LK+AALVPDLTPFPVNRFMATLTPPIEGY+EKV+EA RRSSG
Sbjct: 180 ESTLLRLKKEAIDALPDKLKEAALVPDLTPFPVNRFMATLTPPIEGYIEKVKEAARRSSG 239

Query: 236 NEKMR 240
            EK+R
Sbjct: 240 KEKIR 244

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297809741|ref|XP_002872754.1| hypothetical protein ARALYDRAFT_490185 [Arabidopsis lyrata subsp. lyrata] gi|297318591|gb|EFH49013.1| hypothetical protein ARALYDRAFT_490185 [Arabidopsis lyrata subsp. lyrata]

 Score =  313 bits (803), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 159/252 (63%), Positives = 199/252 (78%), Gaps = 12/252 (4%)

Query: 1   MFRITKSKPL-EYLSHQFLQKCSASGTPKGKAKMKAGQQLKRSKITTKKGS--------- 50
           M R+T+ KP+ E LS+  LQ+CSASGTPKGKAK+K GQ LKR+K++TKKG          
Sbjct: 1   MIRVTRPKPIIESLSYHLLQRCSASGTPKGKAKLKTGQPLKRNKVSTKKGGGGGGGGAVG 60

Query: 51  --SPAKGAKAHAPDEKQRLYDQCLNAPTPVRFLTPKDKKREIEREKLGLISKDRQREIDI 108
               A   K    DEKQ+LY+QCLNAP PVR+LTP + +RE +REKLGLISK++QR+++I
Sbjct: 61  DGEEAVKGKGRISDEKQKLYEQCLNAPCPVRYLTPNEIEREAQREKLGLISKEKQRDMEI 120

Query: 109 LKKGGKQAMGISDEPMIMGTPGMDLISLGLVDADKIPKYELTAEDGKRLAKECSRVLMRR 168
            KKGG  +MGI+DEPM +GTPG+D ISLG+ +A+++PKY+LT EDG+RLAKE S+VLMR 
Sbjct: 121 QKKGGAASMGITDEPMRIGTPGLDYISLGIFEAEELPKYKLTEEDGERLAKEYSKVLMRE 180

Query: 169 HRARQAAESTLLRLKKEAIEALPEDLKKAALVPDLTPFPVNRFMATLTPPIEGYMEKVRE 228
           HR R+AAE+ LL LKK AIEALPE+LKKAAL PDLTPFP NR MATLTPPIEGY+EKV +
Sbjct: 181 HRERRAAETALLNLKKAAIEALPENLKKAALEPDLTPFPANRGMATLTPPIEGYLEKVMD 240

Query: 229 ATRRSSGNEKMR 240
           A ++SS  EK+R
Sbjct: 241 AAKKSSSKEKLR 252

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15235571|ref|NP_192449.1| copper ion binding protein [Arabidopsis thaliana] gi|79325003|ref|NP_001031586.1| copper ion binding protein [Arabidopsis thaliana] gi|7267300|emb|CAB81082.1| putative protein [Arabidopsis thaliana] gi|34146822|gb|AAQ62419.1| At4g05400 [Arabidopsis thaliana] gi|51969282|dbj|BAD43333.1| putative protein [Arabidopsis thaliana] gi|332657114|gb|AEE82514.1| copper ion binding protein [Arabidopsis thaliana] gi|332657115|gb|AEE82515.1| copper ion binding protein [Arabidopsis thaliana]

 Score =  311 bits (797), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 157/250 (62%), Positives = 201/250 (80%), Gaps = 10/250 (4%)

Query: 1   MFRITKSKPL-EYLSHQFLQKCSASGTPKGKAKMKAGQQLKRSKITTKKGS----SPAKG 55
           M R+TK K + E LS+  +Q+CSASGTPKGKAK+K GQ LKR+K++ KKG     +P +G
Sbjct: 1   MIRVTKPKAIIESLSYHLIQRCSASGTPKGKAKLKTGQPLKRNKLSIKKGGGGGGAPVEG 60

Query: 56  -----AKAHAPDEKQRLYDQCLNAPTPVRFLTPKDKKREIEREKLGLISKDRQREIDILK 110
                 K    DEKQ+LY+QCLNAP PVR+LTP++ +RE +REKLGLISK++QR+++I K
Sbjct: 61  EEAVKGKGRISDEKQKLYEQCLNAPCPVRYLTPQEIEREAQREKLGLISKEKQRDMEIQK 120

Query: 111 KGGKQAMGISDEPMIMGTPGMDLISLGLVDADKIPKYELTAEDGKRLAKECSRVLMRRHR 170
           KGG  +MG++DEPM +GTPG+D ISLG+ +A+++PKY+LT EDG+RLAKE S+VLMR HR
Sbjct: 121 KGGAASMGVTDEPMRIGTPGLDYISLGIFEAEELPKYKLTEEDGERLAKEYSKVLMREHR 180

Query: 171 ARQAAESTLLRLKKEAIEALPEDLKKAALVPDLTPFPVNRFMATLTPPIEGYMEKVREAT 230
            R+AAE+ LL LKK AIEALPE+LKKAAL PDLTPFP NR MATLTPPIEGY+EKV +A 
Sbjct: 181 ERRAAETALLNLKKSAIEALPENLKKAALEPDLTPFPANRGMATLTPPIEGYLEKVMDAA 240

Query: 231 RRSSGNEKMR 240
           ++SS  EK+R
Sbjct: 241 KKSSSKEKLR 250

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449432078|ref|XP_004133827.1| PREDICTED: uncharacterized protein LOC101213243 [Cucumis sativus]

 Score =  307 bits (787), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 161/248 (64%), Positives = 198/248 (79%), Gaps = 9/248 (3%)

Query: 1   MFRITKSKPLEYLS----HQFLQKCSASGTPKGKAKMKAGQQLKRSKITTKKGSSPAKGA 56
           M R TK K L   +    HQ LQ+C  S T KGK+K+KAGQ LKRSKIT KKG + +KG 
Sbjct: 1   MIRFTKFKSLSLSADSGAHQLLQRCWVSRTAKGKSKIKAGQPLKRSKITVKKGGAASKGG 60

Query: 57  KAHA----PDEKQRLYDQCLNAPTPVRFLTPKDKKREIEREKLGLISKDRQREIDILKKG 112
                   P ++++LYDQCLNAPTP+RFL  K+++RE +REKLGLISK+RQREID++K  
Sbjct: 61  DGGGGKKIPPDQEKLYDQCLNAPTPLRFLKAKEREREAKREKLGLISKERQREIDMMKMD 120

Query: 113 GKQAMGISDEPMIMGTPGMDLISLGLVDADKIPKYELTAEDGKRLAKECSRVLMRRHRAR 172
            K  +GISD P I+GTPG+DLISLGLVDADKIPKYELT EDG+RLAKE SRVLM++HRAR
Sbjct: 121 -KSKLGISDSPSIIGTPGLDLISLGLVDADKIPKYELTVEDGQRLAKEYSRVLMKQHRAR 179

Query: 173 QAAESTLLRLKKEAIEALPEDLKKAALVPDLTPFPVNRFMATLTPPIEGYMEKVREATRR 232
           +AAE+ LL++K EAIEALP+ LK AALVPD+TPFP +RFMATLTPPIEGY+EK+ EA ++
Sbjct: 180 RAAETMLLKMKSEAIEALPDHLKAAALVPDMTPFPADRFMATLTPPIEGYVEKIDEAAKK 239

Query: 233 SSGNEKMR 240
           S+G EK+R
Sbjct: 240 STGKEKLR 247

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225454424|ref|XP_002280136.1| PREDICTED: uncharacterized protein LOC100258561 [Vitis vinifera]

 Score =  305 bits (782), Expect = 9e-81,   Method: Compositional matrix adjust.
 Identities = 163/245 (66%), Positives = 190/245 (77%), Gaps = 6/245 (2%)

Query: 1   MFRITK-SKPLEYLSHQFLQKCSASGTPKGKAKMKAGQQLKRSKITTKKGSSPA----KG 55
           M RI+  +K    LSHQF+QKC  S T KGK KMK GQ LKRSKIT KKG   A    +G
Sbjct: 1   MIRISGIAKSKSCLSHQFIQKCFVSRTAKGKGKMKDGQPLKRSKITKKKGPVDAAAADRG 60

Query: 56  AKAHAPDEKQRLYDQCLNAPTPVRFLTPKDKKREIEREKLGLISKDRQREIDILKKGGKQ 115
            +  A  + ++L + CL APTP+R+LTPK KKRE EREK+GL S  R+ E+++LKK   +
Sbjct: 61  PRNEAKVKMEQLENACLTAPTPIRYLTPKQKKREEEREKMGLTSNARRVELEMLKKNKSK 120

Query: 116 AMGISDEPMIMGTPGMDLISLGLVDADKIPKYELTAEDGKRLAKECSRVLMRRHRARQAA 175
              + D PMI+GTPG+DLISLGLVDA+ IPKYELT EDG+RLAKE SRVLMRRHRARQAA
Sbjct: 121 KSEL-DSPMIIGTPGLDLISLGLVDAESIPKYELTVEDGRRLAKEYSRVLMRRHRARQAA 179

Query: 176 ESTLLRLKKEAIEALPEDLKKAALVPDLTPFPVNRFMATLTPPIEGYMEKVREATRRSSG 235
           EST+LRLKKEAIEALPE+LK AALVPDLTPFP NRFMATLTPPIEGY+EKV EA +RS  
Sbjct: 180 ESTILRLKKEAIEALPENLKAAALVPDLTPFPANRFMATLTPPIEGYIEKVMEAAKRSIT 239

Query: 236 NEKMR 240
            EK+R
Sbjct: 240 KEKLR 244

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|307136356|gb|ADN34170.1| hypothetical protein [Cucumis melo subsp. melo]

 Score =  303 bits (777), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 166/248 (66%), Positives = 200/248 (80%), Gaps = 9/248 (3%)

Query: 1   MFRITKSKPLEYLS----HQFLQKCSASGTPKGKAKMKAGQQLKRSKITTKKGSSPAKGA 56
           M R TK K L   +    HQ LQ+C  SGT KGK+K+KAGQ LKRSKIT KKG + +KG 
Sbjct: 1   MIRFTKFKSLSLYADSSAHQLLQRCWVSGTAKGKSKIKAGQPLKRSKITVKKGGAASKGG 60

Query: 57  KAHAPD----EKQRLYDQCLNAPTPVRFLTPKDKKREIEREKLGLISKDRQREIDILKKG 112
            +        E+++LYDQCLNAPTP+RFL  K+++RE EREKLGL+SK+RQREI+++K  
Sbjct: 61  DSGGGKKISPEEEKLYDQCLNAPTPLRFLKAKEREREAEREKLGLMSKERQREIEMMKMD 120

Query: 113 GKQAMGISDEPMIMGTPGMDLISLGLVDADKIPKYELTAEDGKRLAKECSRVLMRRHRAR 172
            K  +GISD P I+GTPG+DLISLG+VDADKIPKYELT EDG+RLAKE SRVLMR+HRAR
Sbjct: 121 -KSKLGISDSPSIIGTPGLDLISLGVVDADKIPKYELTVEDGRRLAKEYSRVLMRQHRAR 179

Query: 173 QAAESTLLRLKKEAIEALPEDLKKAALVPDLTPFPVNRFMATLTPPIEGYMEKVREATRR 232
           +AAESTLL++KKEAIEALP+ LK AALVPD+TPFP +RFMATLTPPIEGYMEK+ EA +R
Sbjct: 180 RAAESTLLKMKKEAIEALPDHLKAAALVPDMTPFPADRFMATLTPPIEGYMEKIDEAAKR 239

Query: 233 SSGNEKMR 240
           SS  EK+R
Sbjct: 240 SSAKEKLR 247

Source: Cucumis melo subsp. melo

Species: Cucumis melo

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356520332|ref|XP_003528817.1| PREDICTED: uncharacterized protein LOC100776061 [Glycine max]

 Score =  302 bits (773), Expect = 8e-80,   Method: Compositional matrix adjust.
 Identities = 160/241 (66%), Positives = 196/241 (81%), Gaps = 3/241 (1%)

Query: 1   MFRITKSKPLEYLSHQFLQKCSASGTPKGKAKMKAGQQLKRSKITTKK-GSSPAKGAKAH 59
           M R+ K +P     H  +Q+C+ SGT KGKAK+KAGQ LKRS+ITTKK GS+ A    + 
Sbjct: 1   MLRLLKPQPFPS-GHHLIQRCAVSGTAKGKAKIKAGQALKRSRITTKKPGSATAGPPMSR 59

Query: 60  APDEKQRLYDQCLNAPTPVRFLTPKDKKREIEREKLGLISKDRQREIDILKKGGKQAMGI 119
              E++RLY+QCL APTP+R LT K+++RE EREKLGLISKDRQREID++K+   +   +
Sbjct: 60  ERQERERLYEQCLQAPTPLRHLTQKEREREAEREKLGLISKDRQREIDMMKRKDDK-FKV 118

Query: 120 SDEPMIMGTPGMDLISLGLVDADKIPKYELTAEDGKRLAKECSRVLMRRHRARQAAESTL 179
           S++P I+GTPG+D +SLGLVD DK+PKY+LT EDG+RLAKE SRVLMR+HRARQAAES L
Sbjct: 119 SEKPTIIGTPGLDYVSLGLVDVDKLPKYDLTVEDGRRLAKEYSRVLMRKHRARQAAESNL 178

Query: 180 LRLKKEAIEALPEDLKKAALVPDLTPFPVNRFMATLTPPIEGYMEKVREATRRSSGNEKM 239
           LR+KKEAIEALPE L++AALVPDL PFPVNRFMATLTPPIEGY+E+VREA  R SG EK+
Sbjct: 179 LRMKKEAIEALPEGLREAALVPDLAPFPVNRFMATLTPPIEGYIEQVREAANRISGKEKI 238

Query: 240 R 240
           R
Sbjct: 239 R 239

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|358346296|ref|XP_003637205.1| hypothetical protein MTR_077s0016 [Medicago truncatula] gi|355503140|gb|AES84343.1| hypothetical protein MTR_077s0016 [Medicago truncatula]

 Score =  300 bits (768), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 163/246 (66%), Positives = 194/246 (78%), Gaps = 9/246 (3%)

Query: 1   MFRITKSKPLEYLS---HQFLQKCSASGTPKGKAKMKAGQQLKRSKITTKK-GSSPAKGA 56
           M R+TK KP    S   HQFLQ+CS S T KGK K  AGQ LKRSKIT KK G+ P  GA
Sbjct: 1   MLRLTKLKPPSPPSSSPHQFLQRCSVSRTAKGKGK--AGQILKRSKITVKKTGAEPTPGA 58

Query: 57  KAHAPD--EKQRLYDQCLNAPTPVRFLTPKDKKREIEREKLGLISKDRQREIDILKKGGK 114
              + +  E++RLY+QCLNAPTP+RFL PK + RE ER KLGLISKDRQ E+D++KK   
Sbjct: 59  PTGSREKQERERLYEQCLNAPTPLRFLKPKQRAREAERGKLGLISKDRQIELDMMKKKNA 118

Query: 115 QAMGISDEPMIMGTPGMDLISLGLVDADKIPKYELTAEDGKRLAKECSRVLMRRHRARQA 174
           +   +S++P IMGTPG+D I+LGLVDA+K+PKYELT EDG +LAKE SRVLMR+HRARQA
Sbjct: 119 K-FRVSEKPTIMGTPGLDYITLGLVDAEKLPKYELTKEDGMKLAKEYSRVLMRKHRARQA 177

Query: 175 AESTLLRLKKEAIEALPEDLKKAALVPDLTPFPVNRFMATLTPPIEGYMEKVREATRRSS 234
           AE+ LL +KKEAIEALP  LK+AALVPDLTPFPVNRFMATLTPPI+GY+EK++EA  R S
Sbjct: 178 AETNLLMMKKEAIEALPGGLKEAALVPDLTPFPVNRFMATLTPPIDGYIEKIKEAADRIS 237

Query: 235 GNEKMR 240
           G EK+R
Sbjct: 238 GKEKIR 243

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|358347548|ref|XP_003637818.1| hypothetical protein MTR_103s0045 [Medicago truncatula] gi|355503753|gb|AES84956.1| hypothetical protein MTR_103s0045 [Medicago truncatula]

 Score =  300 bits (768), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 157/242 (64%), Positives = 189/242 (78%), Gaps = 6/242 (2%)

Query: 1   MFRITKSKPLEYLSHQFLQKCSASGTPKGKAKMKAGQQLKRSKITTKK-GSSPAKGAKAH 59
           M R+TK KP     HQ LQ+CS S T KGK K  AGQ LKRSKIT KK G  P  GA   
Sbjct: 57  MLRLTKLKPPSSSPHQLLQRCSVSRTAKGKGK--AGQILKRSKITVKKSGPEPTPGAPTG 114

Query: 60  APD--EKQRLYDQCLNAPTPVRFLTPKDKKREIEREKLGLISKDRQREIDILKKGGKQAM 117
           + +  E++RLYDQCLNAPTP+RFL PK + RE EREKLGLISKDRQ E+D++KK   +  
Sbjct: 115 SREKQERERLYDQCLNAPTPLRFLKPKQRAREAEREKLGLISKDRQIELDMMKKKNAK-F 173

Query: 118 GISDEPMIMGTPGMDLISLGLVDADKIPKYELTAEDGKRLAKECSRVLMRRHRARQAAES 177
            + ++P IMGTPG+D I+LGLVDA+K+PKYELT EDG +LAKE SRVLMR+HRARQAAE+
Sbjct: 174 RVFEKPTIMGTPGLDYITLGLVDAEKLPKYELTKEDGMKLAKEYSRVLMRKHRARQAAET 233

Query: 178 TLLRLKKEAIEALPEDLKKAALVPDLTPFPVNRFMATLTPPIEGYMEKVREATRRSSGNE 237
            LLR+KK+AIEALP  LK+ ALVPDLTPFP+N FMATLTPPI+GY+E+++EA  R SG E
Sbjct: 234 NLLRMKKKAIEALPGGLKETALVPDLTPFPMNMFMATLTPPIDGYIEEIKEAADRISGKE 293

Query: 238 KM 239
           K+
Sbjct: 294 KI 295

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	240
TAIR|locus:2115974	250	AT4G05400 "AT4G05400" [Arabido	1.0	0.96	0.604	5e-76
TAIR|locus:2127418	243	AT4G21140 "AT4G21140" [Arabido	1.0	0.987	0.576	8.9e-70

TAIR|locus:2115974 AT4G05400 "AT4G05400" [Arabidopsis thaliana (taxid:3702)]

 Score = 766 (274.7 bits), Expect = 5.0e-76, P = 5.0e-76
 Identities = 151/250 (60%), Positives = 193/250 (77%)

Query:     1 MFRITKSKPL-EYLSHQFLQKCSASGTPKGKAKMKAGQQLKRSKITTXXXXXXXXX---- 55
             M R+TK K + E LS+  +Q+CSASGTPKGKAK+K GQ LKR+K++              
Sbjct:     1 MIRVTKPKAIIESLSYHLIQRCSASGTPKGKAKLKTGQPLKRNKLSIKKGGGGGGAPVEG 60

Query:    56 -----XXXXXXDEKQRLYDQCLNAPTPVRFLTPKDKKREIEREKLGLISKDRQREIDILK 110
                        DEKQ+LY+QCLNAP PVR+LTP++ +RE +REKLGLISK++QR+++I K
Sbjct:    61 EEAVKGKGRISDEKQKLYEQCLNAPCPVRYLTPQEIEREAQREKLGLISKEKQRDMEIQK 120

Query:   111 KGGKQAMGISDEPMIMGTPGMDLISLGLVDADKIPKYELTAEDGKRLAKECSRVLMRRHR 170
             KGG  +MG++DEPM +GTPG+D ISLG+ +A+++PKY+LT EDG+RLAKE S+VLMR HR
Sbjct:   121 KGGAASMGVTDEPMRIGTPGLDYISLGIFEAEELPKYKLTEEDGERLAKEYSKVLMREHR 180

Query:   171 ARQAAESTLLRLKKEAIEALPEDLKKAALVPDLTPFPVNRFMATLTPPIEGYMEKVREAT 230
              R+AAE+ LL LKK AIEALPE+LKKAAL PDLTPFP NR MATLTPPIEGY+EKV +A 
Sbjct:   181 ERRAAETALLNLKKSAIEALPENLKKAALEPDLTPFPANRGMATLTPPIEGYLEKVMDAA 240

Query:   231 RRSSGNEKMR 240
             ++SS  EK+R
Sbjct:   241 KKSSSKEKLR 250

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0005507 "copper ion binding" evidence=IDA

GO:0009640 "photomorphogenesis" evidence=RCA

GO:0010388 "cullin deneddylation" evidence=RCA

GO:0016567 "protein ubiquitination" evidence=RCA

GO:0016571 "histone methylation" evidence=RCA

GO:0016579 "protein deubiquitination" evidence=RCA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=RCA

GO:0005739 "mitochondrion" evidence=IDA

TAIR|locus:2127418 AT4G21140 "AT4G21140" [Arabidopsis thaliana (taxid:3702)]

 Score = 707 (253.9 bits), Expect = 8.9e-70, P = 8.9e-70
 Identities = 140/243 (57%), Positives = 180/243 (74%)

Query:     1 MFRITKSKPL-EYLSHQFLQKCSASGTPKGKAKMKAGQQLKRSKITTXXXXXXXXXXXXX 59
             M R  + KP+ + +S+  LQKC ASGTPKGK+K+K GQ LKR+K+T              
Sbjct:     1 MIRFARPKPIIDSVSYNLLQKCYASGTPKGKSKLKTGQSLKRNKLTIKKGGGNGGGRGGD 60

Query:    60 XXDE-KQRLYDQCLNAPTPVRFLTPKDKKREIEREKLGLISKDRQREIDILKKGGKQAMG 118
               D+ K R+ DQC+NAP PVR+L PK+++RE  REKLGLISK RQ+EID  KKGG   MG
Sbjct:    61 EVDKGKGRISDQCINAPCPVRYLRPKEREREARREKLGLISKARQKEIDFQKKGGSFTMG 120

Query:   119 ISDEPMIMGTPGMDLISLGLVDADKIPKYELTAEDGKRLAKECSRVLMRRHRARQAAEST 178
             ++  PM +GTPG+D ISLG+   D++PKY++T EDG RLAKE SRVLMR HRAR+ AE +
Sbjct:   121 VTTAPMRIGTPGLDYISLGIFTEDELPKYKVTVEDGIRLAKEYSRVLMREHRARRVAEIS 180

Query:   179 LLRLKKEAIEALPEDLKKAALVPDLTPFPVNRFMATLTPPIEGYMEKVREAT-RRSSGNE 237
             L++++  A+EALPE+LKKAALV DLTPFPV+R  ATLTPPIEGY+E++  A  R+SSG E
Sbjct:   181 LMKMRNAAVEALPENLKKAALVRDLTPFPVSRGTATLTPPIEGYLERIMNAAARKSSGKE 240

Query:   238 KMR 240
             K+R
Sbjct:   241 KLR 243


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.316   0.133   0.369    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      240       225   0.00077  113 3  11 22  0.42    33
                                                     32  0.41    36


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  545 (58 KB)
  Total size of DFA:  142 KB (2089 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  22.18u 0.09s 22.27t   Elapsed:  00:00:02
  Total cpu time:  22.18u 0.09s 22.27t   Elapsed:  00:00:02
  Start:  Fri May 10 06:25:58 2013   End:  Fri May 10 06:26:00 2013

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: fgenesh4_pm.C_LG_XI000194 hypothetical protein (243 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	240
PF09812	157	MRP-L28: Mitochondrial ribosomal protein L28; Inte	99.93
KOG4778	186	consensus Mitochondrial ribosomal protein L28 [Tra	99.73

>PF09812 MRP-L28: Mitochondrial ribosomal protein L28; InterPro: IPR019192 Ribosomes are the particles that catalyse mRNA-directed protein synthesis in all organisms

Probab=99.93  E-value=2.2e-26  Score=193.06  Aligned_cols=97  Identities=28%  Similarity=0.363  Sum_probs=92.4

Q ss_pred             CCCCccc-cccCCcc---cCCCCCCCCHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---CHHHHHH
Q 026298          128 TPGMDLI-SLGLVDA---DKIPKYELTAEDGKR---LAKECSRVLMRRHRARQAAESTLLRLKKEAIEAL---PEDLKKA  197 (240)
Q Consensus       128 ~p~lDfi-plkllDe---R~Rp~~eLs~EE~er---L~KEWSRyKmrEH~a~~~aI~~~l~aQqeAL~eL---sEeLy~A  197 (240)
                      .|.-||+ |..++++   |+++.++||+||.++   |.|+|++|++++|+++.++|++++++|++||++|   |++||++
T Consensus        39 ~Pi~e~~v~~~~~~~~~~R~r~~~~ls~Ee~erh~~i~kaW~~yk~~~~~~~~~~l~~~~~sq~~AleeLr~~S~eLY~a  118 (157)
T PF09812_consen   39 KPIEEFEVPQKSVDSASRRQRPLLKLSREELERHATIQKAWSLYKQQQREAREQQLRRQYESQQKALEELRLESPELYQA  118 (157)
T ss_pred             CCchhhhhhHHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHH
Confidence            5777888 9999888   899999999999995   9999999999999999999999999999999999   9999999


Q ss_pred             hhCCCCCCCCcccCCCccCCCCCChHH
Q 026298          198 ALVPDLTPFPVNRFMATLTPPIEGYME  224 (240)
Q Consensus       198 Ai~pD~~lfP~~R~gPt~TPPIegY~e  224 (240)
                      |+++|.++|||+..|||+||||+||+.
T Consensus       119 A~~~d~~~fP~e~~~Pt~TPPi~~Y~~  145 (157)
T PF09812_consen  119 AIQPDPGLFPLEMRGPTDTPPIKNYEA  145 (157)
T ss_pred             HhccCCCCCCeeecCCCCCCCCCCCCC
Confidence            999999999999999999999999973

The codons of the mRNA are exposed on the ribosome to allow tRNA binding. This leads to the incorporation of amino acids into the growing polypeptide chain in accordance with the genetic information. Incoming amino acid monomers enter the ribosomal A site in the form of aminoacyl-tRNAs complexed with elongation factor Tu (EF-Tu) and GTP. The growing polypeptide chain, situated in the P site as peptidyl-tRNA, is then transferred to aminoacyl-tRNA and the new peptidyl-tRNA, extended by one residue, is translocated to the P site with the aid the elongation factor G (EF-G) and GTP as the deacylated tRNA is released from the ribosome through one or more exit sites [, ]. About 2/3 of the mass of the ribosome consists of RNA and 1/3 of protein. The proteins are named in accordance with the subunit of the ribosome which they belong to - the small (S1 to S31) and the large (L1 to L44). Usually they decorate the rRNA cores of the subunits. Many ribosomal proteins, particularly those of the large subunit, are composed of a globular, surfaced-exposed domain with long finger-like projections that extend into the rRNA core to stabilise its structure. Most of the proteins interact with multiple RNA elements, often from different domains. In the large subunit, about 1/3 of the 23S rRNA nucleotides are at least in van der Waal's contact with protein, and L22 interacts with all six domains of the 23S rRNA. Proteins S4 and S7, which initiate assembly of the 16S rRNA, are located at junctions of five and four RNA helices, respectively. In this way proteins serve to organise and stabilise the rRNA tertiary structure. While the crucial activities of decoding and peptide transfer are RNA based, proteins play an active role in functions that may have evolved to streamline the process of protein synthesis. In addition to their function in the ribosome, many ribosomal proteins have some function 'outside' the ribosome [, ]. Members of this family are components of the mitochondrial large ribosomal subunit. Mature mitochondrial ribosomes consist of a small (37S) and a large (54S) subunit. The 37S subunit contains at least 33 different proteins and 1 molecule of RNA (15S). The 54S subunit contains at least 45 different proteins and 1 molecule of RNA (21S) [, ].

>KOG4778 consensus Mitochondrial ribosomal protein L28 [Translation, ribosomal structure and biogenesis]

Probab=99.73  E-value=1.8e-17  Score=143.67  Aligned_cols=95  Identities=25%  Similarity=0.283  Sum_probs=89.4

Q ss_pred             CCCccc-cccCCcc---cCCCCCCCCHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---CHHHHHHh
Q 026298          129 PGMDLI-SLGLVDA---DKIPKYELTAEDGKR---LAKECSRVLMRRHRARQAAESTLLRLKKEAIEAL---PEDLKKAA  198 (240)
Q Consensus       129 p~lDfi-plkllDe---R~Rp~~eLs~EE~er---L~KEWSRyKmrEH~a~~~aI~~~l~aQqeAL~eL---sEeLy~AA  198 (240)
                      |=-|++ |+++.|+   |++|..+|+.|+.+.   +.|.|+.|++++..++...|+.++++|+.|+++|   |++||+||
T Consensus        66 pvd~l~~p~~~~~~~~~rqrp~~klt~e~~e~rav~~k~W~~y~~~~rq~~d~~Ir~~~kaq~~al~eLk~es~~Ly~aA  145 (186)
T KOG4778|consen   66 PVDDLMVPLESEKKDYKRQRPLLKLTDEQLEKRAVILKTWSIYKQQQRQLEDVGIRPQSKAQFKALNELKSESEELYEAA  145 (186)
T ss_pred             chHHhhhHHHhcCccccccCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHH
Confidence            445777 9999988   999999999999993   9999999999999999999999999999999999   99999999


Q ss_pred             hCCCC-CCCCcccCCCccCCCCCChH
Q 026298          199 LVPDL-TPFPVNRFMATLTPPIEGYM  223 (240)
Q Consensus       199 i~pD~-~lfP~~R~gPt~TPPIegY~  223 (240)
                      +.+|. ..||+..+||++||||.+|.
T Consensus       146 ~~~s~gk~lPve~~gP~~tPPi~~y~  171 (186)
T KOG4778|consen  146 IEFSPGKRLPVEVKGPTDTPPIKNYK  171 (186)
T ss_pred             hccccccccceeecCCCCCCCccccc
Confidence            99999 89999999999999999985

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	240
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	8e-04

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 39.5 bits (91), Expect = 8e-04
 Identities = 49/310 (15%), Positives = 87/310 (28%), Gaps = 102/310 (32%)

Query: 5   TKSKPLEYLSHQFLQKCSASGTPK-------------GKAKMKAG-------QQLKRSKI 44
           T  +    L  ++L  C     P+                 ++ G       + +   K+
Sbjct: 299 TPDEVKSLLL-KYL-DCRPQDLPREVLTTNPRRLSIIA-ESIRDGLATWDNWKHVNCDKL 355

Query: 45  TTKKGSSPAKGAKAHAPDEKQRLYDQCL----NAPTPVRFLT---PKDKKREIER----- 92
           TT   SS         P E ++++D+      +A  P   L+       K ++       
Sbjct: 356 TTIIESS----LNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKL 411

Query: 93  EKLGLISKDRQREIDILKKGGKQAMGISDEPMIMGTPGMDLISL--GLVDADKIPK---- 146
            K  L+ K  +             + I    + +     +  +L   +VD   IPK    
Sbjct: 412 HKYSLVEKQPKEST----------ISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDS 461

Query: 147 -----------------YELTAEDGKRLAKECSRVLM--R------RH-----RARQAAE 176
                            + L   +          V +  R      RH      A  +  
Sbjct: 462 DDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSIL 521

Query: 177 STLLRLK--KEAIEALPEDLKKAALVPDLTPFPVN--------RFM----ATLTPPIEG- 221
           +TL +LK  K  I     D K   LV  +  F           ++       L    E  
Sbjct: 522 NTLQQLKFYKPYI--CDNDPKYERLVNAILDFLPKIEENLICSKYTDLLRIALMAEDEAI 579

Query: 222 YMEKVREATR 231
           + E  ++  R
Sbjct: 580 FEEAHKQVQR 589

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00