Citrus Sinensis ID: 026344

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240
Protein Sequence
MEILDLFEVALMPILKVLLVTALGLVLAIDRIDLLGHSVTHSLNNLVFYVFNPALIGSNLAETITYQSLISLWFMPVNILLSFLIGSALAWILIKITRTPPHLQGLVIGCCSAGNMGNLLLIIVPAVCEESNSPFGDTSVCSSYGKAYASLSMAVGAIYIWTYVYYVMSLYLNKSVSDAGTNKDSRIHIISSGESSTNIFLESSRKPLLHSSDRRSPDDSQIQAETRSTKSRVTKKDFPS
Secondary Structure (PSIPRED)
ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccEEEEEccccccHHHHHHHHHHHHHcccccccccHHHHcHHHHHHHHHHHHHHHHEEcHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHEEHEHcHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccEEEEEEEEcccccccEEEEEHHEcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccHHcccccccccccccccccccccccccccccccccccccEEccccccccEEEcccccc
Coil and Loop (DISEMBL)
MEILDLFEVALMPILKVLLVTALGLVLAIDRIDLLGHSVTHSLNNLVFYvfnpaligsnlAETITYQSLISLWFMPVNILLSFLIGSALAWILIKItrtpphlqglvigccsagnmGNLLLIIVPAvceesnspfgdtsvcsSYGKAYASLSMAVGAIYIWTYVYYVMSLYLNksvsdagtnkdsrihiissgesstniflessrkpllhssdrrspddsqiqaetrstksrvtkkdfps
Flexible Loop (DISEMBL)
MEILDLFEVALMPILKVLLVTALGLVLAIDRIDLLGHSVTHSLNNLVFYVFNPALIGSNLAETITYQSLISLWFMPVNILLSFLIGSALAWILIKITRTPPHLQGLVIGCCSAGNMGNLLLIIVPAVCEESNSPFGDTSVCSSYGKAYASLSMAVGAIYIWTYVYYVMSLYLNKSVSDAGTNKDSRIHIIssgesstniflessrkpllhssdrrspddsqiqaetrstksrvtkkdfps
Low Complexity Region (SEG)
MEILDLFEVALMPIlkvllvtalglvlAIDRIDLLGHSVTHSLNNLVFYVFNPALIGSNLAETITYQSLISLWFMPVNILLSFLIGSALAWILIKITRTPPHLQGLVIGCCSAGNMGNLLLIIVPAVCEESNSPFGDTSVCSSYGKAYASLSMAVGAIYIWTYVYYVMSLYLNKSVSDAGTNKDSRIHIISSGESSTNIFLESSRKPLLHSSDRRSPDDSQIQAETRSTKSRVTKKDFPS
Disordered region (IsUnstruct)
**ILDLFEVALMPILKVLLVTALGLVLAIDRIDLLGHSVTHSLNNLVFYVFNPALIGSNLAETITYQSLISLWFMPVNILLSFLIGSALAWILIKITRTPPHLQGLVIGCCSAGNMGNLLLIIVPAVCEESNSPFGDTSVCSSYGKAYASLSMAVGAIYIWTYVYYVMSLYLNKSV****************************************************************
Disordered Region (DISOPRED)
*EILDLFEVALMPILKVLLVTALGLVLAIDRIDLLGHSVTHSLNNLVFYVFNPALIGSNLAETITYQSLISLWFMPVNILLSFLIGSALAWILIKITRTPPHLQGLVIGCCSAGNMGNLLLIIVPAVCEESNSPFGDTSVCSSYGKAYASLSMAVGAIYIWTYVYYVMSL**********************************************************************
Disordered Region (DISEMBL)
MEILDLFEVALMPILKVLLVTALGLVLAIDRIDLLGHSVTHSLNNLVFYVFNPALIGSNLAETITYQSLISLWFMPVNILLSFLIGSALAWILIKITRTPPHLQGLVIGCCSAGNMGNLLLIIVPAVCEESNSPFGDTSVCSSYGKAYASLSMAVGAIYIWTYVYYVMSLYLNKSVSDAGTNKDSRIHIISSGESSTNIFLESSRKP*********************************
Disordered Region (DISPRO)
*EILDLFEVALMPILKVLLVTALGLVLAIDRIDLLGHSVTHSLNNLVFYVFNPALIGSNLAETITYQSLISLWFMPVNILLSFLIGSALAWILIKITRTPPHLQGLVIGCCSAGNMGNLLLIIVPAVCEESNSPFGDTSVCSSYGKAYASLSMAVGAIYIWTYVYYVMSLYLN******************************************************STKSRVTK*****
Transmembrane Helix (TMHMM)
oooooooooHHHHHHHHHHHHHHHHHHHHiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
ooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
oooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MEILDLFEVALMPILKVLLVTALGLVLAIDRIDLLGHSVTHSLNNLVFYVFNPALIGSNLAETITYQSLISLWFMPVNILLSFLIGSALAWILIKITRTPPHLQGLVIGCCSAGNMGNLLLIIVPAVCEESNSPFGDTSVCSSYGKAYASLSMAVGAIYIWTYVYYVMSLYLNKSVSDAGTNKDSRIHIISSGESSTNIFLESSRKPLLHSSDRRSPDDSQIQAETRSTKSRVTKKDFPS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	240
118481907	405	unknown [Populus trichocarpa]	0.958	0.567	0.616	4e-75
224115416	388	predicted protein [Populus trichocarpa]	0.829	0.512	0.694	4e-75
224061559	374	predicted protein [Populus trichocarpa]	0.787	0.505	0.713	1e-73
255575247	390	auxin:hydrogen symporter, putative [Rici	0.837	0.515	0.609	4e-71
296088501	418	unnamed protein product [Vitis vinifera]	0.958	0.550	0.573	1e-69
359476971	365	PREDICTED: uncharacterized protein LOC10	0.933	0.613	0.542	4e-66
363807244	415	uncharacterized protein LOC100791609 [Gl	0.812	0.469	0.574	4e-62
356496519	415	PREDICTED: uncharacterized protein LOC10	0.783	0.453	0.590	1e-61
356559202	417	PREDICTED: uncharacterized protein LOC10	0.837	0.482	0.541	4e-61
255635354	274	unknown [Glycine max]	0.783	0.686	0.579	8e-61

>gi|118481907|gb|ABK92888.1| unknown [Populus trichocarpa]

 Score =  286 bits (733), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 148/240 (61%), Positives = 175/240 (72%), Gaps = 10/240 (4%)

Query: 1   MEILDLFEVALMPILKVLLVTALGLVLAIDRIDLLGHSVTHSLNNLVFYVFNPALIGSNL 60
           M  LDLF   LMP+LKVLL+T LGL LA+DRIDLLG +  H +NNLVFY+F PAL+ S L
Sbjct: 1   MGFLDLFVAPLMPVLKVLLITGLGLFLALDRIDLLGANARHYMNNLVFYLFGPALVVSQL 60

Query: 61  AETITYQSLISLWFMPVNILLSFLIGSALAWILIKITRTPPHLQGLVIGCCSAGNMGNLL 120
            ETIT+QSL +LWFMPVNILL+F+IGS LAWILIKIT+TPPHLQGLVIGCCSAGN+GNLL
Sbjct: 61  GETITFQSLNTLWFMPVNILLTFMIGSILAWILIKITKTPPHLQGLVIGCCSAGNLGNLL 120

Query: 121 LIIVPAVCEESNSPFGDTSVCSSYGKAYASLSMAVGAIYIWTYVYYVMSLYLNKSVSDAG 180
           LIIVPAVC ESNSPFGD+++CS+ G  YASLSMAVGAIYIWTYVY +M +Y +KS  D  
Sbjct: 121 LIIVPAVCMESNSPFGDSTICSTNGTTYASLSMAVGAIYIWTYVYIIMRIYSDKSAEDTD 180

Query: 181 TNKDSRIHIISSGESSTNIFLESSRKPLLHSSDRRSPDDSQIQAETRSTKSRVTKKDFPS 240
           TN+      IS  ES   + L  SRK   +S       + ++       K  V +K F S
Sbjct: 181 TNQP-----ISDSESYKALLL--SRK---NSGSSGCSKEDELPLTISGEKLTVMEKIFQS 230

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224115416|ref|XP_002317029.1| predicted protein [Populus trichocarpa] gi|222860094|gb|EEE97641.1| predicted protein [Populus trichocarpa]

 Score =  286 bits (733), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 143/206 (69%), Positives = 165/206 (80%), Gaps = 7/206 (3%)

Query: 1   MEILDLFEVALMPILKVLLVTALGLVLAIDRIDLLGHSVTHSLNNLVFYVFNPALIGSNL 60
           M  LDLF  ALMP+LKVLL+T LGL LA+DRIDLLG +  H +NNLVFY+F PAL+ S L
Sbjct: 1   MGFLDLFVAALMPVLKVLLITGLGLFLALDRIDLLGANARHYMNNLVFYLFGPALVVSQL 60

Query: 61  AETITYQSLISLWFMPVNILLSFLIGSALAWILIKITRTPPHLQGLVIGCCSAGNMGNLL 120
            ETIT+QSL +LWFMPVNILL+F+IGS LAWILIKIT+TPPHLQGLVIGCCSAGN+GNLL
Sbjct: 61  GETITFQSLNTLWFMPVNILLTFMIGSILAWILIKITKTPPHLQGLVIGCCSAGNLGNLL 120

Query: 121 LIIVPAVCEESNSPFGDTSVCSSYGKAYASLSMAVGAIYIWTYVYYVMSLYLNKSVSDAG 180
           LIIVPAVC ESNSPFGD+++CS+ G  YASLSMAVGAIYIWTYVY +M +Y +KS  D  
Sbjct: 121 LIIVPAVCMESNSPFGDSTICSTNGTTYASLSMAVGAIYIWTYVYIIMRIYSDKSAEDTD 180

Query: 181 TNKDSRIHIISSGESSTNIFLESSRK 206
           TN+      IS  ES   + L  SRK
Sbjct: 181 TNQP-----ISDSESYKALLL--SRK 199

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224061559|ref|XP_002300540.1| predicted protein [Populus trichocarpa] gi|222847798|gb|EEE85345.1| predicted protein [Populus trichocarpa]

 Score =  281 bits (720), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 137/192 (71%), Positives = 158/192 (82%), Gaps = 3/192 (1%)

Query: 1   MEILDLFEVALMPILKVLLVTALGLVLAIDRIDLLGHSVTHSLNNLVFYVFNPALIGSNL 60
           M  LDLF VA++P+LKVLL+T +GL LA+DRIDLLG +    LNNL+FYVF+PAL+ S L
Sbjct: 1   MGFLDLFVVAMVPVLKVLLITLVGLFLALDRIDLLGSTARPYLNNLIFYVFSPALVSSQL 60

Query: 61  AETITYQSLISLWFMPVNILLSFLIGSALAWILIKITRTPPHLQGLVIGCCSAGNMGNLL 120
           A TIT QSL SLWFMPVNILL+F+IGS LAWILIKITRTPPHLQGLVIGCCSAGN+GNLL
Sbjct: 61  AGTITLQSLASLWFMPVNILLTFIIGSVLAWILIKITRTPPHLQGLVIGCCSAGNLGNLL 120

Query: 121 LIIVPAVCEESNSPFGDTSVCSSYGKAYASLSMAVGAIYIWTYVYYVMSLYLNKSVS--- 177
           LIIVPAVC ESNSPFGD++VCSSYG AYASLSMAVGAIYIWTYVY +M +Y + S     
Sbjct: 121 LIIVPAVCNESNSPFGDSTVCSSYGMAYASLSMAVGAIYIWTYVYIIMRIYADNSAENTK 180

Query: 178 DAGTNKDSRIHI 189
           +       R+H+
Sbjct: 181 NVSIADSERVHL 192

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255575247|ref|XP_002528527.1| auxin:hydrogen symporter, putative [Ricinus communis] gi|223532029|gb|EEF33839.1| auxin:hydrogen symporter, putative [Ricinus communis]

 Score =  273 bits (699), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 134/220 (60%), Positives = 165/220 (75%), Gaps = 19/220 (8%)

Query: 19  LVTALGLVLAIDRIDLLGHSVTHSLNNLVFYVFNPALIGSNLAETITYQSLISLWFMPVN 78
           +VT +GL LA+DRIDLLG +  H+LNNLVFYVF+PAL+ S L ETIT+ SL+SLWFMPVN
Sbjct: 19  IVTGIGLSLALDRIDLLGPNARHNLNNLVFYVFSPALVVSQLGETITFSSLVSLWFMPVN 78

Query: 79  ILLSFLIGSALAWILIKITRTPPHLQGLVIGCCSAGNMGNLLLIIVPAVCEESNSPFGDT 138
           ILL+F+IGSALAW+LIKIT+TPPHLQGLVIGCCSAGN+GNLLLIIVPAVCEESNSPFGD+
Sbjct: 79  ILLTFIIGSALAWVLIKITKTPPHLQGLVIGCCSAGNLGNLLLIIVPAVCEESNSPFGDS 138

Query: 139 SVCSSYGKAYASLSMAVGAIYIWTYVYYVMSLYLNKSVSDAGTNKDSRIHIISSGESSTN 198
           + CS+YG+AYASLSMAVGA+YIWTYVY++M +Y +KS     TN                
Sbjct: 139 TTCSTYGEAYASLSMAVGAVYIWTYVYFIMRIYADKSNEAVDTN---------------- 182

Query: 199 IFLESSRKPLLHSSDRRSPDDSQIQAETRSTKSRVTKKDF 238
              ES R+ LL S D  +   + + A+    ++    K+F
Sbjct: 183 ---ESFRESLLPSRDIPASSSNSLHAQLLRKRTFQRIKNF 219

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296088501|emb|CBI37492.3| unnamed protein product [Vitis vinifera]

 Score =  268 bits (685), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 136/237 (57%), Positives = 177/237 (74%), Gaps = 7/237 (2%)

Query: 1   MEILDLFEVALMPILKVLLVTALGLVLAIDRIDLLGHSVTHSLNNLVFYVFNPALIGSNL 60
           M  L LF VAL+PILKVLLVT +GL++A++RIDLLG +   +LN +VFYVFNPAL+ SNL
Sbjct: 1   MGFLSLFVVALVPILKVLLVTGVGLLIALERIDLLGANARRNLNAIVFYVFNPALVSSNL 60

Query: 61  AETITYQSLISLWFMPVNILLSFLIGSALAWILIKITRTPPHLQGLVIGCCSAGNMGNLL 120
           A+TIT+ SL+++WFMPVNILL+F+IGSAL W+LIKITRTP HLQGLV+GCCSAGN+GNLL
Sbjct: 61  AKTITFSSLVTMWFMPVNILLTFVIGSALGWVLIKITRTPQHLQGLVLGCCSAGNLGNLL 120

Query: 121 LIIVPAVCEESNSPFGDTSVCSSYGKAYASLSMAVGAIYIWTYVYYVMSLYLNKSVSDAG 180
           LII+PA+CEE ++PFGD+  CS+ G+AYASLS+A+GAI IW+YVY +M +  NK   +  
Sbjct: 121 LIIIPAICEEEDNPFGDSD-CSTNGEAYASLSLAIGAIGIWSYVYTIMRISANKCKKEIN 179

Query: 181 TNKDSRIHIISSGESSTNIFLESSRKPLLHSSD----RRSPDDSQIQAETRSTKSRV 233
            + DS I I +SGE +  I  E   + LL S D    R   D+ ++       K +V
Sbjct: 180 LD-DSTISIRTSGE-TLEILSEGCTEALLPSKDCPSSRECSDEVELAHAGSEGKQKV 234

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359476971|ref|XP_002263557.2| PREDICTED: uncharacterized protein LOC100249991 [Vitis vinifera]

 Score =  256 bits (655), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 134/247 (54%), Positives = 173/247 (70%), Gaps = 23/247 (9%)

Query: 1   MEILDLFEVALMPILKVLLVTALGLVLAIDRIDLLGHSVTHSLNNLVFYVFNPALIGSNL 60
           M  L LF VAL+PILKVLLVT +GL++A++RIDLLG +   +LN +VFYVFNPAL+ SNL
Sbjct: 1   MGFLSLFVVALVPILKVLLVTGVGLLIALERIDLLGANARRNLNAIVFYVFNPALVSSNL 60

Query: 61  AETITYQSLISLWFMPVNILLSFLIGSALAWILIKITRTPPHLQGLVIGCCSAGNMGNLL 120
           A+TIT+ SL+++WFMPVNILL+F+IGSAL W+LIKITRTP HLQGLV+GCCSAGN+GNLL
Sbjct: 61  AKTITFSSLVTMWFMPVNILLTFVIGSALGWVLIKITRTPQHLQGLVLGCCSAGNLGNLL 120

Query: 121 LIIVPAVCEESNSPFGDTSVCSSYGKAYASLSMAVGAIYIWTYVYYVMSLYLNKSVSDAG 180
           LII+PA+CEE ++PFGD+  CS+ G+AYASLS+A+GAI IW+YVY +M +  NK   +  
Sbjct: 121 LIIIPAICEEEDNPFGDSD-CSTNGEAYASLSLAIGAIGIWSYVYTIMRISANKCKKE-- 177

Query: 181 TNKDSRIHIISSGESSTNIFLESSRKPLLHSSDRRSPDDSQI-------QAETRSTKSRV 233
                    I+  +S+    L S   P    S R   D+ Q+       Q E    K  +
Sbjct: 178 ---------INLDDSTIKALLPSKDCP----SSRECSDEVQVLRKKIKQQVEILMEKIDL 224

Query: 234 TKKDFPS 240
            K   PS
Sbjct: 225 KKVFAPS 231

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|363807244|ref|NP_001242102.1| uncharacterized protein LOC100791609 [Glycine max] gi|255635062|gb|ACU17889.1| unknown [Glycine max]

 Score =  243 bits (621), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 116/202 (57%), Positives = 158/202 (78%), Gaps = 7/202 (3%)

Query: 1   MEILDLFEVALMPILKVLLVTALGLVLAIDRIDLLGHSVTHSLNNLVFYVFNPALIGSNL 60
           M +++LF VA MP++KVL++TA+GL+LA+D ++LLG      +N+LV YVFNPAL+G NL
Sbjct: 1   MGLVELFGVASMPVIKVLIITAIGLLLALDNVNLLGKDARIQVNHLVHYVFNPALVGGNL 60

Query: 61  AETITYQSLISLWFMPVNILLSFLIGSALAWILIKITRTPPHLQGLVIGCCSAGNMGNLL 120
           A+TIT+++++ LWFMPVNILL+F+IGSAL WILIK+TR P HL+GL++G CSAGN+GNL 
Sbjct: 61  ADTITFENVVLLWFMPVNILLTFIIGSALGWILIKLTRAPKHLEGLILGVCSAGNLGNLP 120

Query: 121 LIIVPAVCEESNSPFGDTSVCSSYGKAYASLSMAVGAIYIWTYVYYVMSLYLNKSVSDAG 180
           +II+PA+C++  SPFGD++VC  YG AYASLSMAVGA+YIWTYVY +M   ++ SV    
Sbjct: 121 IIIIPAICKDKGSPFGDSNVCYQYGMAYASLSMAVGAVYIWTYVYNIMR--VSASVVPKD 178

Query: 181 TNKDSRIHIISSGESSTNIFLE 202
             + S   + +SGE     FLE
Sbjct: 179 DYRTSSFRLEASGE-----FLE 195

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356496519|ref|XP_003517114.1| PREDICTED: uncharacterized protein LOC100785182 isoform 1 [Glycine max] gi|356496521|ref|XP_003517115.1| PREDICTED: uncharacterized protein LOC100785182 isoform 2 [Glycine max]

 Score =  242 bits (617), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 111/188 (59%), Positives = 150/188 (79%)

Query: 1   MEILDLFEVALMPILKVLLVTALGLVLAIDRIDLLGHSVTHSLNNLVFYVFNPALIGSNL 60
           M +++LF VA MP++KVLL+TA+GL+LA+D ++LLG      +N+LV YVFNPAL+G NL
Sbjct: 1   MGLVELFGVASMPVIKVLLITAVGLLLALDNVNLLGKDARIQVNHLVHYVFNPALVGGNL 60

Query: 61  AETITYQSLISLWFMPVNILLSFLIGSALAWILIKITRTPPHLQGLVIGCCSAGNMGNLL 120
           A+TIT+++++ LWFMPVNILL+F+IGSAL WILIK+TR P HL+GL++G CSAGN+GNL 
Sbjct: 61  ADTITFENVVLLWFMPVNILLTFIIGSALGWILIKLTRAPKHLEGLIMGVCSAGNLGNLP 120

Query: 121 LIIVPAVCEESNSPFGDTSVCSSYGKAYASLSMAVGAIYIWTYVYYVMSLYLNKSVSDAG 180
           +II+PA+C++  SPFGD++VC  YG AYASLSMAVGA+YIWTYVY +M +  +    DA 
Sbjct: 121 IIIIPAICKDKGSPFGDSNVCYQYGMAYASLSMAVGAVYIWTYVYNIMRVSASVVPKDAY 180

Query: 181 TNKDSRIH 188
                R+ 
Sbjct: 181 RTSSFRLE 188

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356559202|ref|XP_003547889.1| PREDICTED: uncharacterized protein LOC100817605 [Glycine max]

 Score =  240 bits (612), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 112/207 (54%), Positives = 157/207 (75%), Gaps = 6/207 (2%)

Query: 1   MEILDLFEVALMPILKVLLVTALGLVLAIDRIDLLGHSVTHSLNNLVFYVFNPALIGSNL 60
           M  + L  VA  P++KVLLVTA+GL LA+D I +LG      +N LVFYVFNP+L+GSNL
Sbjct: 1   MGFIQLLSVASFPVIKVLLVTAIGLFLALDDISILGEDSRKKVNQLVFYVFNPSLVGSNL 60

Query: 61  AETITYQSLISLWFMPVNILLSFLIGSALAWILIKITRTPPHLQGLVIGCCSAGNMGNLL 120
           A+TIT++S++ LWFMP+NIL +F++GSAL WILIK+TR P H++GL++GCCSAGN+GNLL
Sbjct: 61  AKTITFESIVQLWFMPLNILCTFILGSALGWILIKMTRPPKHMEGLILGCCSAGNLGNLL 120

Query: 121 LIIVPAVCEESNSPFGDTSVCSSYGKAYASLSMAVGAIYIWTYVYYVMSLYLNKSVSDAG 180
           ++I+PA+C+ES +PFGD+ VC  YG AYA+LSMA+GA++IW+YVY +M   ++ S     
Sbjct: 121 IVIIPAICKESGNPFGDSDVCYQYGMAYAALSMAIGAVFIWSYVYNIMR--ISSSRIQKE 178

Query: 181 TNKDSRIHII----SSGESSTNIFLES 203
            N  + I+I+     + ES T+ F E+
Sbjct: 179 DNTGNGINILKASAEASESRTDNFSET 205

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255635354|gb|ACU18030.1| unknown [Glycine max]

 Score =  239 bits (610), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 109/188 (57%), Positives = 150/188 (79%)

Query: 1   MEILDLFEVALMPILKVLLVTALGLVLAIDRIDLLGHSVTHSLNNLVFYVFNPALIGSNL 60
           M +++LF +A MP++KVLL+TA+GL+LA+D ++LLG      +N+LV YVFNPAL+G NL
Sbjct: 1   MGLVELFGMASMPVIKVLLITAVGLLLALDNVNLLGKDARIQVNHLVHYVFNPALVGGNL 60

Query: 61  AETITYQSLISLWFMPVNILLSFLIGSALAWILIKITRTPPHLQGLVIGCCSAGNMGNLL 120
           A+TIT+++++ LWFMPVNILL+F+IGSAL WILIK+TR P HL+GL++G CSAGN+GNL 
Sbjct: 61  ADTITFENVVLLWFMPVNILLTFIIGSALGWILIKLTRAPKHLEGLIMGVCSAGNLGNLP 120

Query: 121 LIIVPAVCEESNSPFGDTSVCSSYGKAYASLSMAVGAIYIWTYVYYVMSLYLNKSVSDAG 180
           +II+PA+C++  SPFGD++VC  YG AYASLSMAVGA+YIWTYVY ++ +  +    DA 
Sbjct: 121 IIIIPAICKDKGSPFGDSNVCYQYGMAYASLSMAVGAVYIWTYVYNIVRVSASVVPKDAY 180

Query: 181 TNKDSRIH 188
                R+ 
Sbjct: 181 RTSSFRLE 188

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	240
TAIR|locus:2011731	390	AT1G76520 "AT1G76520" [Arabido	0.825	0.507	0.495	6.3e-53
TAIR|locus:2011746	415	AT1G76530 "AT1G76530" [Arabido	0.945	0.546	0.384	5e-44
TAIR|locus:2156847	395	AT5G65980 "AT5G65980" [Arabido	0.7	0.425	0.488	2.5e-42
TAIR|locus:2053908	396	AT2G17500 [Arabidopsis thalian	0.687	0.416	0.490	1.4e-41
TAIR|locus:2185123	431	AT5G01990 "AT5G01990" [Arabido	0.691	0.385	0.351	8.2e-25
TAIR|locus:2026366	457	AT1G71090 "AT1G71090" [Arabido	0.679	0.356	0.337	1.1e-22

TAIR|locus:2011731 AT1G76520 "AT1G76520" [Arabidopsis thaliana (taxid:3702)]

 Score = 548 (198.0 bits), Expect = 6.3e-53, P = 6.3e-53
 Identities = 100/202 (49%), Positives = 140/202 (69%)

Query:     1 MEILDLFEVALMPIXXXXXXXXXXXXXAIDRIDLLGHSVTHSLNNLVFYVFNPALIGSNL 60
             +++L+LF  +  P+             A+D ++LLGH     LNN+VFYVF+P+LIGS L
Sbjct:     2 VKLLELFITSSKPVVEILLITSVGFYMALDGVNLLGHDARKYLNNIVFYVFSPSLIGSRL 61

Query:    61 AETITYQSLISLWFMPVNILLSFLIGSALAWILIKITRTPPHLQGLVIGCCSAGNMGNLL 120
             A+++TY+SL+ +WFMPVN+LL+F+IGS L WI+I IT+ P HL+GL++GCC+AGN+GN+ 
Sbjct:    62 ADSVTYESLVKMWFMPVNVLLTFIIGSLLGWIVIVITKPPSHLRGLILGCCAAGNLGNMP 121

Query:   121 LIIVPAVCEESNSPFGDTSVCSSYGKAYASLSMAVGAIYIWTYVYYVMSLYLNKSVS--- 177
             LII+PAVC+E   PFGD   C  YG  Y +LSMA+G+IYIWTYVY +M +  N  V    
Sbjct:   122 LIIIPAVCKEKGGPFGDPESCQKYGMGYVALSMAMGSIYIWTYVYNLMRVLSNSPVETPP 181

Query:   178 DAGTNKDS-RIHIISSGESSTN 198
                +N DS ++ +ISS E   N
Sbjct:   182 SVESNYDSYKVPLISSKEEENN 203

GO:0009672 "auxin:hydrogen symporter activity" evidence=ISS

GO:0009926 "auxin polar transport" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

GO:0015824 "proline transport" evidence=RCA

GO:0019344 "cysteine biosynthetic process" evidence=RCA

TAIR|locus:2011746 AT1G76530 "AT1G76530" [Arabidopsis thaliana (taxid:3702)]

 Score = 464 (168.4 bits), Expect = 5.0e-44, P = 5.0e-44
 Identities = 93/242 (38%), Positives = 142/242 (58%)

Query:     1 MEILDLFEVALMPIXXXXXXXXXXXXXAIDRIDLLGHSVTHSLNNLVFYVFNPALIGSNL 60
             M++L+LF  +  P+             A+D ++LLGH     LNN+VFYVF+P+LIGS L
Sbjct:     1 MKLLELFIASSKPVVETLLITSVGFYLALDTVNLLGHDARKHLNNIVFYVFSPSLIGSRL 60

Query:    61 AETITYQSLISLWFMPVNILLSFLIGSALAWILIKITRTPPHLQGLVIGCCSAGNMGNLL 120
             A+++TY+SL+ +WFMPVN+LL+F+IGS L WI+I IT+ P  L+GL+I CC++GN+G + 
Sbjct:    61 ADSVTYESLVKMWFMPVNVLLTFMIGSLLGWIVIVITKPPSQLRGLIISCCASGNLGTMP 120

Query:   121 LIIVPAVCEESNSPFGDTSVCSSYGKAYASLSMAVGAIYIWTYV--YYV-------MSLY 171
             LII+PA+C+E   PFGD+  C  YG  Y +LSM    I ++ +   +YV       M LY
Sbjct:   121 LIIIPAICKEKGGPFGDSESCEKYGMGYVTLSMTAFFISVYKHDTNWYVSGGNGLLMDLY 180

Query:   172 LNKSVSDAGTNKDSRIHIISSGESSTNIFLESSRKPLLHSSDRRSPDDSQIQAETRSTKS 231
             +N     + +  ++  H I S       + +S +  L+ S +    +D+         K 
Sbjct:   181 INLMRVLSNSPVETHTHSIESN------YDDSCKVQLISSKEEEKEEDNHQVGRWEEVKQ 234

Query:   232 RV 233
             RV
Sbjct:   235 RV 236

GO:0009672 "auxin:hydrogen symporter activity" evidence=ISS

GO:0009926 "auxin polar transport" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

GO:0006863 "purine nucleobase transport" evidence=RCA

TAIR|locus:2156847 AT5G65980 "AT5G65980" [Arabidopsis thaliana (taxid:3702)]

 Score = 448 (162.8 bits), Expect = 2.5e-42, P = 2.5e-42
 Identities = 82/168 (48%), Positives = 110/168 (65%)

Query:     1 MEILDLFEVALMPIXXXXXXXXXXXXXAIDRIDLLGHSVTHSLNNLVFYVFNPALIGSNL 60
             M  L+L EVA MPI             A D   LL      S+N LVF VF P ++ +NL
Sbjct:     1 MGFLELLEVASMPIVQVLLISVLGAFLATDYCSLLSADTRRSVNKLVFVVFTPCIMFANL 60

Query:    61 AETITYQSLISLWFMPVNILLSFLIGSALAWILIKITRTPPHLQGLVIGCCSAGNMGNLL 120
             AET+T Q +IS WFMP+N+ ++FL+G  L W+++K+    P L GL+I  C++GNMGNL+
Sbjct:    61 AETVTLQDIISWWFMPINVGITFLVGGILGWLVVKLLNPKPQLHGLIIATCASGNMGNLM 120

Query:   121 LIIVPAVCEESNSPFGDTSVCSSYGKAYASLSMAVGAIYIWTYVYYVM 168
             LI+VPA+C+E  SPFG+ SVC S G +YAS SMA+G  YIWTY Y ++
Sbjct:   121 LILVPAICDEEGSPFGNRSVCRSIGLSYASFSMALGGFYIWTYSYQLV 168

GO:0009672 "auxin:hydrogen symporter activity" evidence=ISS

GO:0009926 "auxin polar transport" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

TAIR|locus:2053908 AT2G17500 [Arabidopsis thaliana (taxid:3702)]

 Score = 441 (160.3 bits), Expect = 1.4e-41, P = 1.4e-41
 Identities = 81/165 (49%), Positives = 111/165 (67%)

Query:     1 MEILDLFEVALMPIXXXXXXXXXXXXXAIDRIDLLGHSVTHSLNNLVFYVFNPALIGSNL 60
             M    L EVA MP+             A DR  L      +S+N +VF +F PAL+ +NL
Sbjct:     1 MGFWSLLEVASMPVIQVLFMSLVGAFMASDRCKLFPVEARNSMNKVVFVLFAPALMFANL 60

Query:    61 AETITYQSLISLWFMPVNILLSFLIGSALAWILIKITRTPPHLQGLVIGCCSAGNMGNLL 120
             A+T+T + +IS WFMPVN+ L+FLIG  L W+++KI + PP+L+GL++  CSAGNMGNL 
Sbjct:    61 AQTVTLEDIISWWFMPVNMGLTFLIGGLLGWLVVKILKPPPYLEGLIVATCSAGNMGNLP 120

Query:   121 LIIVPAVCEESNSPFGDTSVCSSYGKAYASLSMAVGAIYIWTYVY 165
             +I+VPA+C+E  SPFG+ SVC + G +YAS SMA+G  YIWTY +
Sbjct:   121 IILVPAICDEDKSPFGNRSVCRTVGLSYASFSMALGGFYIWTYTF 165

GO:0009507 "chloroplast" evidence=ISM

GO:0009672 "auxin:hydrogen symporter activity" evidence=ISS

GO:0009926 "auxin polar transport" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

GO:0046482 "para-aminobenzoic acid metabolic process" evidence=RCA

TAIR|locus:2185123 AT5G01990 "AT5G01990" [Arabidopsis thaliana (taxid:3702)]

 Score = 284 (105.0 bits), Expect = 8.2e-25, P = 8.2e-25
 Identities = 59/168 (35%), Positives = 96/168 (57%)

Query:     3 ILDLFEVALMPIXXXXXXXXXXXXXAIDRIDLLGHSVTHSLNNLVFYVFNPALIGSNLAE 62
             +L   ++A+MPI             A   +++L  S    LN LVF +  P LI S L +
Sbjct:    24 VLGTIKIAVMPIAKVFTMCFLGLLMASKYVNILPPSGRKLLNGLVFSLLLPCLIFSQLGQ 83

Query:    63 TITYQSLISLWFMPVNILLSFLIGSALAWILIKITRTP-PHLQGLVIGCCSAGNMGNLLL 121
              +T Q ++  WF+PVN++L  + GS + +I+  I R P P+ +  +I     GN+GN+ L
Sbjct:    84 AVTLQKMLQWWFIPVNVVLGTISGSIIGFIVASIVRPPYPYFKFTIIQI-GVGNIGNVPL 142

Query:   122 IIVPAVCEESNSPFGDTSVCSSYGKAYASLSMAVGAIYIWTYVYYVMS 169
             +++ A+C ++++PFGD+  CS  G AY S    VGAI ++TYVY + +
Sbjct:   143 VLLAALCRDTSNPFGDSEKCSIDGTAYISFGQWVGAIILYTYVYQMFA 190

GO:0009672 "auxin:hydrogen symporter activity" evidence=ISS

GO:0009926 "auxin polar transport" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

TAIR|locus:2026366 AT1G71090 "AT1G71090" [Arabidopsis thaliana (taxid:3702)]

 Score = 267 (99.0 bits), Expect = 1.1e-22, P = 1.1e-22
 Identities = 56/166 (33%), Positives = 91/166 (54%)

Query:     3 ILDLFEVALMPIXXXXXXXXXXXXXAIDRIDLLGHSVTHSLNNLVFYVFNPALIGSNLAE 62
             ++D+    ++P+             A  +  L+  +    L+ LVF +F P LI + L E
Sbjct:    13 VVDILS-GVVPLLKLICLTVIGLLLAHPKTQLVPRATFRLLSKLVFALFLPCLIFTELGE 71

Query:    63 TITYQSLISLWFMPVNILLSFLIGSALAWILIKITRTPPHLQGLVIGCCSAGNMGNLLLI 122
             +IT  +++  WF+PVN+LLS ++GS + ++++ I R PP      I   + GN GNLLL 
Sbjct:    72 SITLDNIVQWWFIPVNVLLSAVVGSLIGYLVVLICRPPPEFNRFTIVMTAFGNTGNLLLA 131

Query:   123 IVPAVCEESNSPFGDTSVCSSYGKAYASLSMAVGAIYIWTYVYYVM 168
             IV +VC    +PFG    C+S G +Y S +  V  I ++T VY++M
Sbjct:   132 IVSSVCHTKTNPFGPN--CNSRGVSYVSFAQWVAVILVYTVVYHMM 175


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.320   0.134   0.393    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      240       227   0.00079  113 3  11 22  0.38    33
                                                     32  0.41    36


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  6
  No. of states in DFA:  587 (62 KB)
  Total size of DFA:  169 KB (2100 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  18.66u 0.12s 18.78t   Elapsed:  00:00:01
  Total cpu time:  18.67u 0.12s 18.79t   Elapsed:  00:00:01
  Start:  Fri May 10 08:48:29 2013   End:  Fri May 10 08:48:30 2013

GO:0009672 "auxin:hydrogen symporter activity" evidence=ISS

GO:0009926 "auxin polar transport" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: estExt_Genewise1_v1.C_LG_XI0721 hypothetical protein (389 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	240
pfam03547	321	pfam03547, Mem_trans, Membrane transport protein	1e-28
COG0679	311	COG0679, COG0679, Predicted permeases [General fun	8e-11

>gnl|CDD|217608 pfam03547, Mem_trans, Membrane transport protein

 Score =  109 bits (275), Expect = 1e-28
 Identities = 42/160 (26%), Positives = 76/160 (47%), Gaps = 15/160 (9%)

Query: 9   VALMPILKVLLVTALGLVLAIDRIDLLGHSVTHSLNNLVFYVFNPALIGSNLAETITYQS 68
             +  +L V L+  LG +     I  L       +N LV Y   P LI S+++  +T + 
Sbjct: 1   TVVEAVLPVFLIMLLGYLAGKSGI--LPPDQASGINKLVVYFALPLLIFSSISTNVTLEM 58

Query: 69  LISLWFMPVNILLSFLIGSALAWILIKITRTPPHLQGLVIGCCSAGNMGNLLLIIVPAVC 128
           ++  W +PV ++L   I   + +++ KI + P   +G++I   +  N G L L ++ A+ 
Sbjct: 59  IVDFWLIPVLVVLIVAISLIIGFLVSKIFKLPLEWRGVLILTSAFPNTGFLGLPLLLALY 118

Query: 129 EESNSPFGDTSVCSSYGKAYASLSMAVGAIYIWTYVYYVM 168
            E              G +YA +S+ +G I IWT  Y+++
Sbjct: 119 GE-------------EGLSYAIISVVLGVIIIWTLGYFLI 145

This family includes auxin efflux carrier proteins and other transporter proteins from all domains of life. Length = 321

>gnl|CDD|223751 COG0679, COG0679, Predicted permeases [General function prediction only]

 Score = 60.4 bits (147), Expect = 8e-11
 Identities = 33/170 (19%), Positives = 69/170 (40%), Gaps = 16/170 (9%)

Query: 6   LFEVALMPILKVLLVTALGLVLAIDRIDLLGHSVTHSLNNLVFYVFNPALIGSNLAETIT 65
           +  +    +L + L+  LG +L   R  +L       L+ LV YV  PAL+ +++A    
Sbjct: 1   MMMIVFEVVLPIFLIILLGYLLK--RFGILDEEAARGLSRLVVYVALPALLFNSIATADL 58

Query: 66  YQSLISLWFMPVNILLSFLIGSALAWILIKITRTPPHLQGLVIGCCSAGNMGNLLLIIVP 125
              L  L  +  +++ + L    LA I   + +       +     +  N+G L L +  
Sbjct: 59  -SGLADLGLIVASLVATLLAFFLLALIGRFLFKLDKRETVIFALASAFPNIGFLGLPVAL 117

Query: 126 AVCEESNSPFGDTSVCSSYGKAYASLSMAVGAIYIWTYVYYVMSLYLNKS 175
           ++       FG+  +      AYA + + +G   ++T    +++     +
Sbjct: 118 SL-------FGEKGL------AYAVIFLIIGLFLMFTLGVILLARSGGGT 154

Length = 311

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	240
KOG2722	408	consensus Predicted membrane protein [Function unk	100.0
PF03547	385	Mem_trans: Membrane transport protein; InterPro: I	99.96
COG0679	311	Predicted permeases [General function prediction o	99.84
TIGR00946	321	2a69 he Auxin Efflux Carrier (AEC) Family.	99.83
PRK09903	314	putative transporter YfdV; Provisional	99.81
TIGR00841	286	bass bile acid transporter. Functionally character	97.14
COG0385	319	Predicted Na+-dependent transporter [General funct	94.99
PF05684	378	DUF819: Protein of unknown function (DUF819); Inte	94.91
PF13593	313	DUF4137: SBF-like CPA transporter family (DUF4137)	93.6
TIGR00832	328	acr3 arsenical-resistance protein. The first prote	92.62
PF12794	340	MscS_TM: Mechanosensitive ion channel inner membra	91.07
COG5505	384	Predicted integral membrane protein [Function unkn	89.46
TIGR00783	347	ccs citrate carrier protein, CCS family. These pro	88.39
PF05684	378	DUF819: Protein of unknown function (DUF819); Inte	87.96
TIGR00807	125	malonate_madL malonate transporter, MadL subunit.	83.62
KOG1650	769	consensus Predicted K+/H+-antiporter [Inorganic io	80.57

>KOG2722 consensus Predicted membrane protein [Function unknown]

Probab=100.00  E-value=2.2e-42  Score=316.13  Aligned_cols=173  Identities=48%  Similarity=0.922  Sum_probs=168.2

Q ss_pred             CchHHHHHHHH--HHHHHHHHHHHHHHHHhhhccCCCChhHHHHHHHHHHHHHhhHHHHHHhcccCChhHHhhhhhHHHH
Q 026344            1 MEILDLFEVAL--MPILKVLLVTALGLVLAIDRIDLLGHSVTHSLNNLVFYVFNPALIGSNLAETITYQSLISLWFMPVN   78 (240)
Q Consensus         1 m~~l~~f~~al--~~Vl~V~lii~vGy~la~~r~gil~~~~~~~LsklVf~V~lPaLiF~~la~~it~~~l~~~~~i~v~   78 (240)
                      |++++.+-.|.  +|+++++++..+||++|+++.|++++++||.+|++||++|+|||+|+++++++|.+++.+||++|++
T Consensus         2 mgf~s~~~vas~v~pvlqvl~i~~~G~~lA~~~~~lLp~dark~ln~Lvf~lFtPcLiFs~La~svtl~~ii~~wfiPVn   81 (408)
T KOG2722|consen    2 MGFLSLLEVASGVMPVLQVLLITLVGFLLASDYVNLLPRDARKLLNKLVFYLFTPCLIFSKLAQSVTLEKIIQWWFIPVN   81 (408)
T ss_pred             chHHHHHHHhcccccHHHHHHHHHHHHHHhccccCcCCHHHHHHhhheeeeeecHHHHHHHHhhhccHHHHHHHHhhHHH
Confidence            78999988888  9999999999999999988889999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCCccceeeeeccCCchhhHHHHHHhhhhcCCCCCCCcchhhchhhHHHHHHHHHhhH
Q 026344           79 ILLSFLIGSALAWILIKITRTPPHLQGLVIGCCSAGNMGNLLLIIVPAVCEESNSPFGDTSVCSSYGKAYASLSMAVGAI  158 (240)
Q Consensus        79 ~ll~~llg~~lg~ll~ri~r~p~~~rg~~i~a~~f~N~~~Lpl~ii~aL~~~~~~~FG~~~~~~~~g~aYi~l~~~~~~i  158 (240)
                      .++++++|.++||+++|++|+|++.|+++++||+|+|+|+||+.+++|+|++++.|||++|.|..+|+.|+++++.++.+
T Consensus        82 v~Lt~~ig~liG~lv~~I~rppp~~~~fiia~~a~GN~gnlpL~Lv~alc~~~~~Pfg~~~~c~s~Gi~Y~sf~~~lg~i  161 (408)
T KOG2722|consen   82 VGLTFIIGSLIGWLVVKILRPPPQLRGFIIACCAFGNSGNLPLILVPALCDEDGIPFGNREKCASRGISYVSFSQQLGQI  161 (408)
T ss_pred             HHHHHHHHHHHHHHHhheecCChhhcCeEEEEeecCCcCCcHHHHhHHHhcccCCCCCChhhhhhcchhHHHHHHHhhhh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhhccc
Q 026344          159 YIWTYVYYVMSLYLN  173 (240)
Q Consensus       159 ~~WT~G~~ll~~~~~  173 (240)
                      ++||++|+++.+++.
T Consensus       162 l~wty~Y~~~~~p~~  176 (408)
T KOG2722|consen  162 LRWTYVYRMLLPPNL  176 (408)
T ss_pred             EEEEEEeeeecCCch
Confidence            999999998877753

>PF03547 Mem_trans: Membrane transport protein; InterPro: IPR004776 This entry represents a mostly uncharacterised family of membrane transport proteins found in eukaryotes, bacteria and archaea

Probab=99.96  E-value=5.8e-28  Score=223.43  Aligned_cols=153  Identities=36%  Similarity=0.626  Sum_probs=144.6

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhccCCCChhHHHHHHHHHHHHHhhHHHHHHhcccCChhHHhhhhhHHHHHHHHHHHHHHH
Q 026344           10 ALMPILKVLLVTALGLVLAIDRIDLLGHSVTHSLNNLVFYVFNPALIGSNLAETITYQSLISLWFMPVNILLSFLIGSAL   89 (240)
Q Consensus        10 al~~Vl~V~lii~vGy~la~~r~gil~~~~~~~LsklVf~V~lPaLiF~~la~~it~~~l~~~~~i~v~~ll~~llg~~l   89 (240)
                      ++++++++++++++||+++  |+|+++++..+.+|++|+++++|||+|.+++++.+.+++.++|++++..++.+++++++
T Consensus         2 v~~~i~~i~~ii~~G~~~~--~~~~l~~~~~~~ls~lv~~~~lP~liF~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (385)
T PF03547_consen    2 VFSAILPIFLIILLGYLLG--RFGILDPEASKGLSKLVFNVFLPALIFSSIANTDTLEDLLSLWFIPVFAFIIFILGLLL   79 (385)
T ss_pred             cHHHHHHHHHHHHHHHHHH--HhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhhhhhHHHHHHHHHHHHHHHHH
Confidence            6789999999999999999  99999999999999999999999999999999988999999999999999999999999


Q ss_pred             HHHHHHHhcCCCCCccceeeeeccCCchhhHHHHHHhhhhcCCCCCCCcchhhchhhHHHHHHHHHhhHHHHHHHHHHHh
Q 026344           90 AWILIKITRTPPHLQGLVIGCCSAGNMGNLLLIIVPAVCEESNSPFGDTSVCSSYGKAYASLSMAVGAIYIWTYVYYVMS  169 (240)
Q Consensus        90 g~ll~ri~r~p~~~rg~~i~a~~f~N~~~Lpl~ii~aL~~~~~~~FG~~~~~~~~g~aYi~l~~~~~~i~~WT~G~~ll~  169 (240)
                      ++++.|++|.++++++.+..+++++|++++|+|+++++       ||+      +|++|+++|.++++++.|++|+.+++
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~N~~~lglpi~~~l-------~g~------~~~~~~~~~~~~~~i~~~~~~~~l~~  146 (385)
T PF03547_consen   80 GFLLSRLFRLPKEWRGVFVLAASFGNTGFLGLPILQAL-------FGE------RGVAYAIIFDVVNNIILWSLGYFLLE  146 (385)
T ss_pred             HHHHHHhcCCCcccceEEEecccCCcchhhHHHHHHHH-------hcc------hhhhhehHHHHhhHHHHHHHHHHhhc
Confidence            99999999999999999999999999999999999996       666      99999999999999999999999998


Q ss_pred             hccccccc
Q 026344          170 LYLNKSVS  177 (240)
Q Consensus       170 ~~~~~~~~  177 (240)
                      .++++.++
T Consensus       147 ~~~~~~~~  154 (385)
T PF03547_consen  147 SRSEKEDK  154 (385)
T ss_pred             cccccccc
Confidence            77665444

Most characterised members of this family are the PIN components of auxin efflux systems from plants. These carriers are saturable, auxin-specific, and localized to the basal ends of auxin transport-competent cells [, ]. Plants typically posses several of these proteins, each displaying a unique tissue-specific expression pattern. They are expressed in almost all plant tissues including vascular tissues and roots, and influence many processes including the establishment of embryonic polarity, plant growth, apical hook formation in seedlings and the photo- and gravitrophic responses. These plant proteins are typically 600-700 amino acyl residues long and exhibit 8-12 transmembrane segments.; GO: 0055085 transmembrane transport, 0016021 integral to membrane

>COG0679 Predicted permeases [General function prediction only]

Probab=99.84  E-value=2.1e-20  Score=170.61  Aligned_cols=153  Identities=22%  Similarity=0.306  Sum_probs=127.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhccCCCChhHHHHHHHHHHHHHhhHHHHHHhcccCChhHHhhhhhHHHHHHHHHHHH
Q 026344            7 FEVALMPILKVLLVTALGLVLAIDRIDLLGHSVTHSLNNLVFYVFNPALIGSNLAETITYQSLISLWFMPVNILLSFLIG   86 (240)
Q Consensus         7 f~~al~~Vl~V~lii~vGy~la~~r~gil~~~~~~~LsklVf~V~lPaLiF~~la~~it~~~l~~~~~i~v~~ll~~llg   86 (240)
                      +...+.+++|+++++++||+++  |.+.++++..+.+|++|+|+++|||+|.+++++ +.+...++..+.+..+.+.+.+
T Consensus         2 ~~~~~~~vlpi~lii~lGy~~~--r~~~~~~~~~~~ls~lv~~~~lP~LlF~~i~~~-~~~~~~~~~~~~~~~~~~~~~~   78 (311)
T COG0679           2 MMIVFEVVLPIFLIILLGYLLK--RFGILDEEAARGLSRLVVYVALPALLFNSIATA-DLSGLADLGLIVASLVATLLAF   78 (311)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHH--HhcccCHHHHHHHHHHHHHHHhHHHHHHHHHhC-CcchhhhHHHHHHHHHHHHHHH
Confidence            4567889999999999999999  999999999999999999999999999999998 5555555555555445554555


Q ss_pred             HHHHHHHHHHhcCCCCCccceeeeeccCCchhhHHHHHHhhhhcCCCCCCCcchhhchhhHHHHHHHHHhhHHHHHHHHH
Q 026344           87 SALAWILIKITRTPPHLQGLVIGCCSAGNMGNLLLIIVPAVCEESNSPFGDTSVCSSYGKAYASLSMAVGAIYIWTYVYY  166 (240)
Q Consensus        87 ~~lg~ll~ri~r~p~~~rg~~i~a~~f~N~~~Lpl~ii~aL~~~~~~~FG~~~~~~~~g~aYi~l~~~~~~i~~WT~G~~  166 (240)
                      ++..++..|..+.+++.++.+..++.|+|++++|+|+..+       .||+      +|++|+++|+..+++..|++|+.
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~g~lg~pi~~~-------~~G~------~gl~~~~i~~~~~~~~~~~~g~~  145 (311)
T COG0679          79 FLLALIGRFLFKLDKRETVIFALASAFPNIGFLGLPVALS-------LFGE------KGLAYAVIFLIIGLFLMFTLGVI  145 (311)
T ss_pred             HHHHHHHHHHhccchhhHHHHHHHHHhcccchhhHHHHHH-------HcCc------chHHHHHHHHHHHHHHHHHHHHH
Confidence            4444455556667777677888899999999999999877       5999      99999999999999999999999


Q ss_pred             HHhhccccc
Q 026344          167 VMSLYLNKS  175 (240)
Q Consensus       167 ll~~~~~~~  175 (240)
                      .+.+.+...
T Consensus       146 ~l~~~~~~~  154 (311)
T COG0679         146 LLARSGGGT  154 (311)
T ss_pred             HHHHhcCCc
Confidence            987765544

>TIGR00946 2a69 he Auxin Efflux Carrier (AEC) Family

Probab=99.83  E-value=2.9e-20  Score=169.56  Aligned_cols=149  Identities=18%  Similarity=0.184  Sum_probs=127.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHH-hhhccCCCChhHHHHHHHHHHHHHhhHHHHHHhcccCChh-HHhhhhhHHHHHHHHH
Q 026344            6 LFEVALMPILKVLLVTALGLVL-AIDRIDLLGHSVTHSLNNLVFYVFNPALIGSNLAETITYQ-SLISLWFMPVNILLSF   83 (240)
Q Consensus         6 ~f~~al~~Vl~V~lii~vGy~l-a~~r~gil~~~~~~~LsklVf~V~lPaLiF~~la~~it~~-~l~~~~~i~v~~ll~~   83 (240)
                      .++..++.++|+++++++||++ +  |+|+++++..+.+|++++|+++||++|+++++. +.+ .....+...+.....+
T Consensus         2 ~~~~~~~~ilpv~~ii~lG~~~~~--r~~~~~~~~~~~l~~~v~~i~lP~lif~~~~~~-~~~~~~~~~~~~~~~~~~~~   78 (321)
T TIGR00946         2 ITYVILETVLPILVVILLGYILGK--RFGILDEEHASGINRFVINFALPLTIFHSISTT-LADILQKSQSPVVLFLWGAF   78 (321)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHH--HhCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHH
Confidence            4678899999999999999999 8  999999999999999999999999999999986 443 3333344444555666


Q ss_pred             HHHHHHHHHHHH-HhcCCCCCccceeeeeccCCchhhHHHHHHhhhhcCCCCCCCcchhhchh---hHHHHHHHHHhhHH
Q 026344           84 LIGSALAWILIK-ITRTPPHLQGLVIGCCSAGNMGNLLLIIVPAVCEESNSPFGDTSVCSSYG---KAYASLSMAVGAIY  159 (240)
Q Consensus        84 llg~~lg~ll~r-i~r~p~~~rg~~i~a~~f~N~~~Lpl~ii~aL~~~~~~~FG~~~~~~~~g---~aYi~l~~~~~~i~  159 (240)
                      ++.++++|++.| .+|.+++.++.+..+++++|++++|+|+++++       ||+      +|   +.|+..+.+.+++.
T Consensus        79 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~GlPl~~~~-------~G~------~~~~~~~~~~~~~~~~~~~  145 (321)
T TIGR00946        79 SGSYALIWLITKPLFKADYGKLSGFLLVSALPNTAFIGYPLLLSL-------FGE------EGAKILIAALFIDTGAVLM  145 (321)
T ss_pred             HHHHHHHHHHHHHHHhcccchhhHHHHHhhhccceeehHHHHHHH-------hcc------cchhhhHHHHHHHhccchh
Confidence            778888999888 77888888999999999999999999999996       777      55   78999999999999


Q ss_pred             HHHHHHHHHhh
Q 026344          160 IWTYVYYVMSL  170 (240)
Q Consensus       160 ~WT~G~~ll~~  170 (240)
                      .|++|+.+...
T Consensus       146 ~~~~~~~~~~~  156 (321)
T TIGR00946       146 TIALGLFLVSE  156 (321)
T ss_pred             HHHHHHHHhcc
Confidence            99999877654

>PRK09903 putative transporter YfdV; Provisional

Probab=99.81  E-value=6.8e-19  Score=160.42  Aligned_cols=147  Identities=14%  Similarity=0.197  Sum_probs=117.9

Q ss_pred             HHHHHHHHHHHHHHHHHhhhccCCCChhHHHHHHHHHHHHHhhHHHHHHhcccCChhHHhhhhhHHHHHHHHHHHHHHHH
Q 026344           11 LMPILKVLLVTALGLVLAIDRIDLLGHSVTHSLNNLVFYVFNPALIGSNLAETITYQSLISLWFMPVNILLSFLIGSALA   90 (240)
Q Consensus        11 l~~Vl~V~lii~vGy~la~~r~gil~~~~~~~LsklVf~V~lPaLiF~~la~~it~~~l~~~~~i~v~~ll~~llg~~lg   90 (240)
                      ++.++|+++++++||+++  |+|+++++..+.+|++++|+++||++|.++.+. +.+++..-+...+...+.++++++++
T Consensus         6 ~~~ilpif~ii~lG~~~~--r~~~~~~~~~~~ls~lv~~v~lPalif~s~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (314)
T PRK09903          6 IGDLLPIIVIMLLGYFSG--RRETFSEDQARAFNKLVLNYALPAALFVSITRA-NREMIFADTRLTLVSLVVIVGCFFFS   82 (314)
T ss_pred             HHHHHHHHHHHHHHHHHH--HhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHHHHHhhhhHHHHHHHHHHHHHHHH
Confidence            456799999999999999  999999999999999999999999999999986 77766533445566777777888888


Q ss_pred             HHHHH-HhcCCCCCccceeeeeccCCchhhHHHHHHhhhhcCCCCCCCcchhhchhhHHHHHHHHHhhHHHHHHHHHHHh
Q 026344           91 WILIK-ITRTPPHLQGLVIGCCSAGNMGNLLLIIVPAVCEESNSPFGDTSVCSSYGKAYASLSMAVGAIYIWTYVYYVMS  169 (240)
Q Consensus        91 ~ll~r-i~r~p~~~rg~~i~a~~f~N~~~Lpl~ii~aL~~~~~~~FG~~~~~~~~g~aYi~l~~~~~~i~~WT~G~~ll~  169 (240)
                      |++.| ..|.+++.++....+++++|++++|+|+++++       ||+  +.. .|+.|+.++. ..+++.|++|..++.
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~N~gf~G~Pl~~~~-------~G~--~~~-~~~~~a~~~~-~~~~~~~~~g~~~~~  151 (314)
T PRK09903         83 WFGCYKFFKRTHAEAAVCALIAGSPTIGFLGFAVLDPI-------YGD--SVS-TGLVVAIISI-IVNAITIPIGLYLLN  151 (314)
T ss_pred             HHHHHHHhcCCcchhhHhhhhhcCCCcccccHHHHHHH-------cCc--hhh-hhhHHHHHHH-HHHHHHHHHHHHHHc
Confidence            88775 55666566666677889999999999999995       777  111 1565665544 578899999999887


Q ss_pred             hc
Q 026344          170 LY  171 (240)
Q Consensus       170 ~~  171 (240)
                      .+
T Consensus       152 ~~  153 (314)
T PRK09903        152 PS  153 (314)
T ss_pred             cc
Confidence            53

>TIGR00841 bass bile acid transporter

Probab=97.14  E-value=0.016  Score=52.57  Aligned_cols=131  Identities=12%  Similarity=0.103  Sum_probs=77.6

Q ss_pred             HHHHHHHHHHHHHHhhhccCCCChhHHHHHHH---HHHHHHhhHHHHHHhcccCChhHHhh-hhhHHHHHHHHHHHHHHH
Q 026344           14 ILKVLLVTALGLVLAIDRIDLLGHSVTHSLNN---LVFYVFNPALIGSNLAETITYQSLIS-LWFMPVNILLSFLIGSAL   89 (240)
Q Consensus        14 Vl~V~lii~vGy~la~~r~gil~~~~~~~Lsk---lVf~V~lPaLiF~~la~~it~~~l~~-~~~i~v~~ll~~llg~~l   89 (240)
                      ...+++=.++|..++  |..   ++..+.+.+   +.. +.+=++++..++.+  .+.+.. .+.+.+..++..++++++
T Consensus       140 ~~~v~vPl~lG~~~r--~~~---p~~~~~~~~~~~~s~-~~l~liv~~~~~~~--~~~i~~~~~~~~~~~~ll~~~~~~~  211 (286)
T TIGR00841       140 LVAVLIPVSIGMLVK--HKL---PQIAKIILKVGLISV-FLLSVIIAVVGGIN--VENLATIGPLLLLVGILLPLAGFLL  211 (286)
T ss_pred             HHHHHHHHHHHHHHH--HHh---HHHHHHHHhCchHHH-HHHHHHHHHHHHhh--HHHHHHhhHHHHHHHHHHHHHHHHH
Confidence            456667777888887  332   222222222   222 12223333333332  233332 334444556777899999


Q ss_pred             HHHHHHHhcCCCCCccceeeeeccCCchhhHHHHHHhhhhcCCCCCCCcchhhchhhHHHHHHHHHhhHHHHH
Q 026344           90 AWILIKITRTPPHLQGLVIGCCSAGNMGNLLLIIVPAVCEESNSPFGDTSVCSSYGKAYASLSMAVGAIYIWT  162 (240)
Q Consensus        90 g~ll~ri~r~p~~~rg~~i~a~~f~N~~~Lpl~ii~aL~~~~~~~FG~~~~~~~~g~aYi~l~~~~~~i~~WT  162 (240)
                      ||+++|.+|.+++.+......++..|++ +++++..+       -|++  +...-+..|...+++.+.++.+-
T Consensus       212 g~~~a~~~~l~~~~~~t~~~~~g~qN~~-lal~la~~-------~f~~--~~a~~~~~~~v~~~~~~~~~a~~  274 (286)
T TIGR00841       212 GYLLAKLAGLPWARCRTISIEVGMQNSQ-LCSTIAQL-------SFSP--EVAVPSAIFPLIYALFQLAFALL  274 (286)
T ss_pred             HHHHHHHhCCCHhhheeeeeeeecccHH-HHHHHHHH-------hcCh--HHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999887777777788999998 88887666       3653  22233445666666666665543

Functionally characterized members of the BASS family catalyze Na+:bile acid symport. These systems have been identified in intestinal, liver and kidney tissues of animals. These symporters exhibit broad specificity, taking up a variety of non bile organic compounds as well as taurocholate and other bile salts. Functionally uncharacterised homologues are found in plants, yeast, archaea and bacteria.

>COG0385 Predicted Na+-dependent transporter [General function prediction only]

Probab=94.99  E-value=0.97  Score=42.02  Aligned_cols=72  Identities=13%  Similarity=0.056  Sum_probs=48.1

Q ss_pred             HHhhHHHHHHhcccCChhHHhhhh-hHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccceeeeeccCCch-hhHHHH
Q 026344           50 VFNPALIGSNLAETITYQSLISLW-FMPVNILLSFLIGSALAWILIKITRTPPHLQGLVIGCCSAGNMG-NLLLII  123 (240)
Q Consensus        50 V~lPaLiF~~la~~it~~~l~~~~-~i~v~~ll~~llg~~lg~ll~ri~r~p~~~rg~~i~a~~f~N~~-~Lpl~i  123 (240)
                      ..+=+.++...+.+  ..++.... .+.+..++..++++.+||..+|.++.++..+..+..|.+-.|.+ ..|++.
T Consensus       201 ~~illIv~~~~s~~--~~~~~~~~~~v~~~v~~~n~lg~~~gy~~ar~~g~~~a~~iti~ie~g~qn~~lg~alA~  274 (319)
T COG0385         201 LSILLIVYAAFSAA--VENGIWSGLLIFVAVILHNLLGLLLGYFGARLLGFDKADEITIAIEGGMQNLGLGAALAA  274 (319)
T ss_pred             HHHHHHHHHHHHHH--HHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhheeeEEEeeccccHHHHHHHHH
Confidence            34444444444443  33333322 34445577788999999999999999999998888888888875 444443

>PF05684 DUF819: Protein of unknown function (DUF819); InterPro: IPR008537 This family contains proteins of unknown function from archaeal, bacterial and plant species

Probab=94.91  E-value=0.51  Score=44.74  Aligned_cols=89  Identities=17%  Similarity=0.231  Sum_probs=63.5

Q ss_pred             HHHHHHHHHHHHHHHhhhccCCCChhHHHHHHHHHHHHHhhHHHHHHhcccCChhHHhhhhhHHHH----HHHHHHHHHH
Q 026344           13 PILKVLLVTALGLVLAIDRIDLLGHSVTHSLNNLVFYVFNPALIGSNLAETITYQSLISLWFMPVN----ILLSFLIGSA   88 (240)
Q Consensus        13 ~Vl~V~lii~vGy~la~~r~gil~~~~~~~LsklVf~V~lPaLiF~~la~~it~~~l~~~~~i~v~----~ll~~llg~~   88 (240)
                      -+-++++++.+|.+++  ..|+++.+....+-..+....+|..++--+.+. |+.++.....=++.    +.+.+++|..
T Consensus        24 ~l~~~vl~~~~~~~ls--nlgli~~p~~s~~y~~v~~~~vPlai~LlLl~~-Dlr~i~~~g~~~l~~F~~~~~g~viG~~  100 (378)
T PF05684_consen   24 YLPGAVLCYLLGMLLS--NLGLIDSPASSPVYDFVWTYLVPLAIPLLLLSA-DLRRILRLGGRLLLAFLIGAVGTVIGAV  100 (378)
T ss_pred             hcCHHHHHHHHHHHHH--HCCCcCCCCcchHHHHHHHHHHHHHHHHHHHHc-cHHHHHHhhHHHHHHHHHHHHHHHHHHH
Confidence            4456778888999999  999996666677889999999999999988887 88888876443333    3455566666


Q ss_pred             HHHHHHHHhcCCCCCc
Q 026344           89 LAWILIKITRTPPHLQ  104 (240)
Q Consensus        89 lg~ll~ri~r~p~~~r  104 (240)
                      +++.+.+..-.|..++
T Consensus       101 va~~l~~~~l~~~~wk  116 (378)
T PF05684_consen  101 VAFLLFGGFLGPEGWK  116 (378)
T ss_pred             HHHHHHhhcccchHHH
Confidence            6665555432343333

>PF13593 DUF4137: SBF-like CPA transporter family (DUF4137)

Probab=93.60  E-value=1.2  Score=41.00  Aligned_cols=108  Identities=19%  Similarity=0.193  Sum_probs=65.4

Q ss_pred             HHHHHHHHHHHHHhhhccCCCChhH--HHHHHHHHHHHHhhHHHHHHhcccCChh---HH--hhhhhHHHHHHHHHHHHH
Q 026344           15 LKVLLVTALGLVLAIDRIDLLGHSV--THSLNNLVFYVFNPALIGSNLAETITYQ---SL--ISLWFMPVNILLSFLIGS   87 (240)
Q Consensus        15 l~V~lii~vGy~la~~r~gil~~~~--~~~LsklVf~V~lPaLiF~~la~~it~~---~l--~~~~~i~v~~ll~~llg~   87 (240)
                      +.+++=..+|.+++  |.  +++-.  .+..-+.+-...+-.+++.+...++..+   ++  ..+..+....+....+++
T Consensus       165 ~~vllP~~~Gq~~r--~~--~~~~~~~~~~~~~~~~~~~ll~iv~~~fs~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l  240 (313)
T PF13593_consen  165 LTVLLPLVLGQLLR--RW--VPKWVARHKKPLSLLSQLALLLIVYSAFSSAFAQGAWHSVSAAALALIVAVSLLLLLVVL  240 (313)
T ss_pred             HHHHHHHHHHHHHH--HH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhhCCHHHHHHHHHHHHHHHHHHH
Confidence            45555566677766  22  22221  1334444566666777777766653222   11  122223333455566777


Q ss_pred             HHHHHHHHHhcCCCCCccceeeeeccCCchhhHHHHHHhh
Q 026344           88 ALAWILIKITRTPPHLQGLVIGCCSAGNMGNLLLIIVPAV  127 (240)
Q Consensus        88 ~lg~ll~ri~r~p~~~rg~~i~a~~f~N~~~Lpl~ii~aL  127 (240)
                      .++|..+|.++.+++.+-.+.. |+-..+..+|+|++..+
T Consensus       241 ~~~~~~~r~~~~~~~d~iA~~F-~gs~Ksl~~gvpl~~~l  279 (313)
T PF13593_consen  241 VLGWLAARLLGFSRPDRIAVLF-CGSQKSLALGVPLASIL  279 (313)
T ss_pred             HHHHHHHhhcCCChhhEEEEEE-EcCcCcchhHHHHHHHH
Confidence            8889999999988887766554 55588888899988775

>TIGR00832 acr3 arsenical-resistance protein

Probab=92.62  E-value=0.65  Score=43.07  Aligned_cols=106  Identities=13%  Similarity=0.102  Sum_probs=60.3

Q ss_pred             HHHHHHHHHHHHHhhhcc-----CCCChhHHHHHHHHHHHHHhhHHHHHHhcccCChhHHhhh----hhHHHHHHHHHHH
Q 026344           15 LKVLLVTALGLVLAIDRI-----DLLGHSVTHSLNNLVFYVFNPALIGSNLAETITYQSLISL----WFMPVNILLSFLI   85 (240)
Q Consensus        15 l~V~lii~vGy~la~~r~-----gil~~~~~~~LsklVf~V~lPaLiF~~la~~it~~~l~~~----~~i~v~~ll~~ll   85 (240)
                      .-+++=..+|.+++....     ++..+...+.++++.. +++=..++...+.+  .+.+.+.    +.+....++..++
T Consensus       182 ~~v~lPlvlG~~lr~~~~~~~~~~~~~~~~~~~~~~~~~-l~l~~iv~~~~~~~--~~~i~~~~~~i~~~~~~v~l~~~~  258 (328)
T TIGR00832       182 IYLGIPLIAGILTRYWLLKRKGREWYEKVFLPKISPWSL-IALLFTIVLLFAFQ--GETIIELPLDIALIAIPLLIYFYI  258 (328)
T ss_pred             HHHHHHHHHHHHHHHHHHHccchHHHHHHHHhhcchHHH-HHHHHHHHHHHHHH--HHHHHhChHHHHHHHHHHHHHHHH
Confidence            334445566776663111     1222223333444333 33334444554444  3334333    2222234577889


Q ss_pred             HHHHHHHHHHHhcCCCCCccceeeeeccCCch-hhHHHH
Q 026344           86 GSALAWILIKITRTPPHLQGLVIGCCSAGNMG-NLLLII  123 (240)
Q Consensus        86 g~~lg~ll~ri~r~p~~~rg~~i~a~~f~N~~-~Lpl~i  123 (240)
                      ++.+|++++|.+|.+++.+..+..+++-.|.+ .++++.
T Consensus       259 ~~~lg~~~~r~~~l~~~~~~a~~~e~g~qN~~lai~lA~  297 (328)
T TIGR00832       259 MFFLTFALAKKLGLPYSITAPAAFTGASNNFELAIAVAI  297 (328)
T ss_pred             HHHHHHHHHHHhCcChhhhhhheehhhhhhHHHHHHHHH
Confidence            99999999999999999888888788878864 444444

The first protein of the ACR3 family functionally characterized was the ACR3 protein of Saccharomyces cerevisiae. It is present in the yeast plasma membrane and pumps arsenite out of the cell in response to the pmf. Similar proteins are found in bacteria, often as part of a four gene operon with an regulatory protein ArsR, a protein of unknown function ArsH, and an arsenate reductase that converts arsenate to arsenite to facilitate transport.

>PF12794 MscS_TM: Mechanosensitive ion channel inner membrane domain 1

Probab=91.07  E-value=9.2  Score=35.63  Aligned_cols=90  Identities=19%  Similarity=0.136  Sum_probs=49.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHH-HHHhhhccCCCChh------HH---HHHHHHHHHHHhhHHHHHHhcccCChhHHhhhhh
Q 026344            5 DLFEVALMPILKVLLVTALG-LVLAIDRIDLLGHS------VT---HSLNNLVFYVFNPALIGSNLAETITYQSLISLWF   74 (240)
Q Consensus         5 ~~f~~al~~Vl~V~lii~vG-y~la~~r~gil~~~------~~---~~LsklVf~V~lPaLiF~~la~~it~~~l~~~~~   74 (240)
                      ..+..++..+.....+...- .+++  +.|+...+      ..   +.--+-...+..|.++...++...+.+...+.  
T Consensus        82 ~~l~~~l~~~a~~~~~~~~~~~l~r--p~Gl~~~HF~w~~~~~~~~r~~l~~~~~~~~pl~~~~~~~~~~~~~~~~d~--  157 (340)
T PF12794_consen   82 VALGAALLAMALFWLVFEFFRRLLR--PNGLAERHFGWPKERVQRLRRQLRWLIWVLVPLLFISIFAENLPDGLARDV--  157 (340)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHC--CCCeEeccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCchhhhhhh--
Confidence            34555555554444444333 3333  44544332      22   22334455688999999999987566555542  


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCC
Q 026344           75 MPVNILLSFLIGSALAWILIKITRTP  100 (240)
Q Consensus        75 i~v~~ll~~llg~~lg~ll~ri~r~p  100 (240)
                        +.-++.++....++++..++++..
T Consensus       158 --LGrl~~ii~~~~l~~~~~~l~~~~  181 (340)
T PF12794_consen  158 --LGRLAFIILLLLLAVFLWRLLRPG  181 (340)
T ss_pred             --HHHHHHHHHHHHHHHHHHHHHccc
Confidence              222344455566677777777654

>COG5505 Predicted integral membrane protein [Function unknown]

Probab=89.46  E-value=2.9  Score=39.00  Aligned_cols=80  Identities=18%  Similarity=0.229  Sum_probs=55.4

Q ss_pred             HHHHHHHHHH-HHHhhhccCCCChhHHHHHHHHHHHHHhhHHHHHHhcccCChhHHhhhhhH----HHHHHHHHHHHHHH
Q 026344           15 LKVLLVTALG-LVLAIDRIDLLGHSVTHSLNNLVFYVFNPALIGSNLAETITYQSLISLWFM----PVNILLSFLIGSAL   89 (240)
Q Consensus        15 l~V~lii~vG-y~la~~r~gil~~~~~~~LsklVf~V~lPaLiF~~la~~it~~~l~~~~~i----~v~~ll~~llg~~l   89 (240)
                      +|-.+++-+| .+..  ..|+++  .......-|-|-.+|++++.-+.+- +..++.....=    .+......++|+++
T Consensus        32 Vpa~v~iy~gamff~--t~Glfs--~~S~~y~~v~n~llpamI~lmLlqc-d~Rki~Klg~rll~ifli~sv~~vlGfIl  106 (384)
T COG5505          32 VPAAVIIYAGAMFFT--TVGLFS--VESPVYDTVWNYLLPAMIPLMLLQC-DVRKIFKLGRRLLFIFLISSVGTVLGFIL  106 (384)
T ss_pred             hhHHHHHHHHHHHHh--hccccc--ccCcHHHHHHHHHHHHHHHHHHHHc-cHHHHHhhcchhhHHHHHHHHHHHHHHHH
Confidence            3444455555 3445  889995  6677888899999999999999886 88888876433    33345566677777


Q ss_pred             HHHHHHHhcC
Q 026344           90 AWILIKITRT   99 (240)
Q Consensus        90 g~ll~ri~r~   99 (240)
                      ++.+.+-+..
T Consensus       107 ~yp~~ksf~g  116 (384)
T COG5505         107 AYPLLKSFIG  116 (384)
T ss_pred             HHHHHhhhcc
Confidence            7766665443

>TIGR00783 ccs citrate carrier protein, CCS family

Probab=88.39  E-value=2.8  Score=39.42  Aligned_cols=89  Identities=11%  Similarity=0.075  Sum_probs=56.9

Q ss_pred             HHHHHHHHHHHhhhccCCCChhHHH---HHHHHHHHHHhhHHHH-HHhcccCChhHHhhhh--hHHHHHHHHHHHHHHHH
Q 026344           17 VLLVTALGLVLAIDRIDLLGHSVTH---SLNNLVFYVFNPALIG-SNLAETITYQSLISLW--FMPVNILLSFLIGSALA   90 (240)
Q Consensus        17 V~lii~vGy~la~~r~gil~~~~~~---~LsklVf~V~lPaLiF-~~la~~it~~~l~~~~--~i~v~~ll~~llg~~lg   90 (240)
                      ...++.+|.++.  ..|+++++...   ...|++.+.+++.+++ ..++.. +++++.+..  ...+..++..+-..+.+
T Consensus       207 ~v~mII~~vi~k--~~gllp~~i~~~a~~~~~F~~~~lt~~ll~giGla~t-~l~~L~~a~t~~~vviiv~~Vlg~ii~s  283 (347)
T TIGR00783       207 YAFMILIAAALK--AFGLVPKEIEEGAKMLSQFISKNLTWPLMVGVGVSYI-DLDDLVAALSWQFVVICLSVVVAMILGG  283 (347)
T ss_pred             HHHHHHHHHHHH--HhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHcccccC-CHHHHHHHhchhHhhhHHHHHHHHHHHH
Confidence            446677788888  99999998765   4555666667777666 456555 899998854  22223333334445556


Q ss_pred             HHHHHHhcCCCCCccceee
Q 026344           91 WILIKITRTPPHLQGLVIG  109 (240)
Q Consensus        91 ~ll~ri~r~p~~~rg~~i~  109 (240)
                      +++.|+++.-+- ...+++
T Consensus       284 ~lvGKllG~YPi-E~aIta  301 (347)
T TIGR00783       284 AFLGKLMGMYPV-ESAITA  301 (347)
T ss_pred             HHHHHHhCCChH-HHHHHH
Confidence            788888876333 344443

These proteins are members of the Citrate:Cation Symporter (CCS) Family (TC 2.A.24). These proteins have 12 GES predicted transmembrane regions. Most members of the CCS family catalyze citrate uptake with either Na+ or H+ as the cotransported cation. However, one member is specific for L-malate and probably functions by a proton symport mechanism.

>PF05684 DUF819: Protein of unknown function (DUF819); InterPro: IPR008537 This family contains proteins of unknown function from archaeal, bacterial and plant species

Probab=87.96  E-value=13  Score=35.22  Aligned_cols=134  Identities=18%  Similarity=0.147  Sum_probs=88.0

Q ss_pred             HHHHHHHHHHHHHhhhccCCCCh-hHHHHHHHHHHHHHhhHHHHHHhcccCChhHHhhhhhHHHHHHHHHHHHHHHHHHH
Q 026344           15 LKVLLVTALGLVLAIDRIDLLGH-SVTHSLNNLVFYVFNPALIGSNLAETITYQSLISLWFMPVNILLSFLIGSALAWIL   93 (240)
Q Consensus        15 l~V~lii~vGy~la~~r~gil~~-~~~~~LsklVf~V~lPaLiF~~la~~it~~~l~~~~~i~v~~ll~~llg~~lg~ll   93 (240)
                      ..++.+..+|...+  ..++... .....+..+..|+|     |..+....+..++.+-..+.++.++.+.+-.++-+++
T Consensus       241 ~~il~~tt~~l~~~--~~~~~~~l~g~~~lg~~lly~f-----fa~IGa~a~i~~l~~ap~~~l~~~i~l~iH~~l~l~~  313 (378)
T PF05684_consen  241 WLILTVTTLGLATS--FPPFRKLLRGASELGTFLLYLF-----FAVIGASADISELLDAPSLFLFGFIILAIHLLLMLIL  313 (378)
T ss_pred             HHHHHHHHHHHHHh--ccchhhcCCchHHHHHHHHHHH-----HHHHccccCHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Confidence            45666677777766  3333333 45567777777654     6677777789999884444555666677777777888


Q ss_pred             HHHhcCCCCCccceeeeeccCCchhhHHHHHHhhhhcCCCCCCCcchhhchhhHHHHHHHHHhhHHHHHHHHHH
Q 026344           94 IKITRTPPHLQGLVIGCCSAGNMGNLLLIIVPAVCEESNSPFGDTSVCSSYGKAYASLSMAVGAIYIWTYVYYV  167 (240)
Q Consensus        94 ~ri~r~p~~~rg~~i~a~~f~N~~~Lpl~ii~aL~~~~~~~FG~~~~~~~~g~aYi~l~~~~~~i~~WT~G~~l  167 (240)
                      .|++|.|..    .+..++..|.+.-.-+-+  ++..    +|+  .-..-|+....+.++++|.+-+.+|+.+
T Consensus       314 ~kl~k~~l~----~~~vAS~AnIGGpaTA~a--~A~a----~~~--~Lv~pgvL~gvlGyaiGty~G~~va~~l  375 (378)
T PF05684_consen  314 GKLFKIDLF----ELLVASNANIGGPATAPA--VAAA----KGP--SLVPPGVLMGVLGYAIGTYLGLAVAQLL  375 (378)
T ss_pred             HHHHCCCHH----HHHHHhhcccCCcchHHH--HHHh----cCC--ccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999998743    223467777776665543  3332    332  3344677778888888888888777654

>TIGR00807 malonate_madL malonate transporter, MadL subunit

Probab=83.62  E-value=15  Score=29.51  Aligned_cols=81  Identities=9%  Similarity=0.111  Sum_probs=53.5

Q ss_pred             HHHHHHHHHHHHHhhhccCCCChhHHHHHHHHHHHHHhhHHHHHHhcccCChhHHhhhhhHHHHHHHHHHHHHHHHHHHH
Q 026344           15 LKVLLVTALGLVLAIDRIDLLGHSVTHSLNNLVFYVFNPALIGSNLAETITYQSLISLWFMPVNILLSFLIGSALAWILI   94 (240)
Q Consensus        15 l~V~lii~vGy~la~~r~gil~~~~~~~LsklVf~V~lPaLiF~~la~~it~~~l~~~~~i~v~~ll~~llg~~lg~ll~   94 (240)
                      +-+++++.+..++.  |+|++++++.+.+.--. ..-.|-.+-..=.++ -...+..-+...+..+.+.++++++--++.
T Consensus        38 iAMlLLi~~~~~l~--k~G~l~~~te~Gi~FW~-aMYIPIVVAMAA~QN-Vv~Al~gG~~Allagi~av~~~~~~i~~l~  113 (125)
T TIGR00807        38 IAMILLIISKELLA--KRGHLPQVTQFGVGFWS-AMYIPIVVAMAAGQN-VVAALSGGMLALLASVAALIVTVLVIRWIS  113 (125)
T ss_pred             HHHHHHHHHHHHHH--HcCCCChhHHhHHHHHH-ccHhHHHHHHhhhch-hHHHhcCCchHHHHHHHHHHHHHHHHHHHH
Confidence            45678888899999  99999999998875322 244565554444444 244455555555566677777777666777


Q ss_pred             HHhcC
Q 026344           95 KITRT   99 (240)
Q Consensus        95 ri~r~   99 (240)
                      |+-+.
T Consensus       114 r~g~~  118 (125)
T TIGR00807       114 KSSYG  118 (125)
T ss_pred             HhCCC
Confidence            66543

The MSS family includes the monobasic malonate:Na+ symporter of Malonomonas rubra. It consists of two integral membrane proteins, MadL and MadM. The transporter is believed to catalyze the electroneutral reversible uptake of H+-malonate with one Na+, and both subunits have been shown to be essential for activity.

>KOG1650 consensus Predicted K+/H+-antiporter [Inorganic ion transport and metabolism]

Probab=80.57  E-value=11  Score=39.00  Aligned_cols=91  Identities=14%  Similarity=0.038  Sum_probs=64.3

Q ss_pred             ccCCCChhHHHHHHHHHHHHHhhHHHHHHhcccCChhHHhhhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccceeee
Q 026344           31 RIDLLGHSVTHSLNNLVFYVFNPALIGSNLAETITYQSLISLWFMPVNILLSFLIGSALAWILIKITRTPPHLQGLVIGC  110 (240)
Q Consensus        31 r~gil~~~~~~~LsklVf~V~lPaLiF~~la~~it~~~l~~~~~i~v~~ll~~llg~~lg~ll~ri~r~p~~~rg~~i~a  110 (240)
                      |.+-++..-...+..+++.+++|+.+...-.+. +...+..++.......+..+.-++.....+..+|+|.  |..+..+
T Consensus       295 ~~~p~g~~L~ekle~~~~~~llPl~~~~~G~k~-di~~i~~~~~~~~~i~~~~~~K~l~t~~~sl~~k~p~--~~~l~l~  371 (769)
T KOG1650|consen  295 HGPPLGSALIEKLEDLVSGLLLPLYFAISGLKT-DISRINKWGALIRTILIFGAVKLLSTLGTSLYCKLPL--RDSLALG  371 (769)
T ss_pred             CCCchhHHHHHHHHHHHHHHHHHHHHHhhccce-eHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCch--hHHHHHH
Confidence            555566688889999999999999998888777 7887777555555556666666666667777888874  4555545


Q ss_pred             eccCCchhhHHHHH
Q 026344          111 CSAGNMGNLLLIIV  124 (240)
Q Consensus       111 ~~f~N~~~Lpl~ii  124 (240)
                      ...++-|.+-+.+.
T Consensus       372 ~lm~~kgl~el~~~  385 (769)
T KOG1650|consen  372 LLMSTKGLVELIVL  385 (769)
T ss_pred             HHHHhhhHHHHHHH
Confidence            55555565555554

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	240
3zux_A	332	Transporter, ASBTNM; transport protein, membrane p	96.18

>3zux_A Transporter, ASBTNM; transport protein, membrane protein; HET: TCH LDA PTY; 2.20A {Neisseria meningitidis} PDB: 3zuy_A*

Probab=96.18  E-value=0.043  Score=49.47  Aligned_cols=49  Identities=22%  Similarity=0.131  Sum_probs=38.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCCCccceeeeeccCCchhhHHHHHHhh
Q 026344           78 NILLSFLIGSALAWILIKITRTPPHLQGLVIGCCSAGNMGNLLLIIVPAV  127 (240)
Q Consensus        78 ~~ll~~llg~~lg~ll~ri~r~p~~~rg~~i~a~~f~N~~~Lpl~ii~aL  127 (240)
                      ..++..++++++||.++|.++.+++.+..+...|+..|+ .+++++..+.
T Consensus       233 ~~~l~~~~~~~lg~~~~r~~~~~~~~~~ti~~e~G~qNs-~lai~lA~~~  281 (332)
T 3zux_A          233 VVVLHNGIGYLLGFFAAKWTGLPYDAQKALTIEVGMQNS-GLAAALAAAH  281 (332)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHCCCH-HHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCCHhHhhhhhhhhhhccH-HHHHHHHHHH
Confidence            445667889999999999999988877666666788898 5888887664

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00