Citrus Sinensis ID: 026374

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------24
Protein Sequence
METIFFFLLLTTSCFSFLVESSDNNHMYSPCGDTKVERSDGFTFAIAFASRSSFFLNNSQQLSPCDRRLSLSSSTSQIAVFRPKVDEISLLTINTSSFSPDNYGGYMVAFAGRKYAARSLPAFVANSTYTVTSFTLALEFKKGRLQNLYWKRDGCSKCSGNSNFVCLNNQDCAIRSTSCKNHGGSVDCSLGIQLAFSGTDKHLSVLNSWYEVENLRQYSLYGLYSNLRDSLTGQYNKIF
Secondary Structure (PSIPRED)
cccHHHHHHHHHHHHHcEEccccccccccccccccEEEcccEEEEEEEcccccEEEccccccccccccccccccccEEEEEEEEccEEEEEEEccccccccccccEEEEEEEcccccccccEEEEcccEEEEEEEEEEEEEccEEEEEEEcccccccccccccEEEEccccEEEEccccccccccccccccEEEEEEEcccccccccHHHHHHcccccHHHHHHHHHHHHHHccccccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHHHHHHHHHcccccccccccccccEEccccEEEEEEEEcccccEccccccccccccHHcccccccEEEEEEccccEEEEEEEccccccccccccEEEEEEcccEEcccccEEEEcccEEEEEEEEEEEEccccEEEEEEEccccccccccccEEEEccccccccccHcccccccccccEEEEEEEcccccccHHHccHHHHHHHHHHHHHHHHHHHHHHHHcHHHccc
Coil and Loop (DISEMBL)
METIFFFLLLTTSCFSFLVessdnnhmyspcgdtkversdgfTFAIAFASRssfflnnsqqlspcdrrlslssstsqiavfrpkvdeislltintssfspdnyggyMVAFAGRKYaarslpafvanstytVTSFTLALEFKKgrlqnlywkrdgcskcsgnsnfvclnnqdcairstscknhggsvdcslgIQLAFSGTDKHLSVLNSWYEVENLRQYSLYGLYSNLRDSLTGQYNKIF
Flexible Loop (DISEMBL)
METIFFFLLLTTSCFSFLVESSDNNHMYSPCGDTKVERSDGFTFAIAFASRSSFFLNNSQQLSPCDRRLSLSSSTSqiavfrpkvdeislltintssfspdnYGGYMVAFAGRKYAARSLPAFVANSTYTVTSFTLALEFKKGRLQNLYWKRDGCSKCSGNSNFVCLNNQDCAIRSTSCKNHGGSVDCSLGIQLAFSGTDKHLSVLNSWYEVENLRQYSLYGLysnlrdsltgqynkif
Low Complexity Region (SEG)
METIffflllttscfsflVESSDNNHMYSPCGDTKVERSDGftfaiafasrssffLNNSQQLSPCDRRLSLSSSTSQIAVFRPKVDEISLLTINTSSFSPDNYGGYMVAFAGRKYAARSLPAFVANSTYTVTSFTLALEFKKGRLQNLYWKRDGCSKCSGNSNFVCLNNQDCAIRSTSCKNHGGSVDCSLGIQLAFSGTDKHLSVLNSWYEVENLRQYSLYGLYSNLRDSLTGQYNKIF
Disordered region (IsUnstruct)
**TIFFFLLLTTSCFSFLVESSDNNHMYSPCGDTKVERSDGFTFAIAFASRSSFFLN*******************QIAVFRPKVDEISLLTINTSSFSPDNYGGYMVAFAGRKYAARSLPAFVANSTYTVTSFTLALEFKKGRLQNLYWKRDGCSKCSGNSNFVCLNNQDCAIRSTSCKNHGGSVDCSLGIQLAFSGTDKHLSVLNSWYEVENLRQYSLYGLYSNLRDSL********
Disordered Region (DISOPRED)
*ETIFFFLLLTTSCFSFLVESSDNNHMYSPCGDTKVERSDGFTFAIAFASRSSFFLNNSQQLSPCDRRLSLSSSTSQIAVFRPKVDEISLLTINTS*****NYGGYMVAFAGRKYAARSLPAFVANSTYTVTSFTLALEFKKGRLQNLYWKRDGCSKCSGNSNFVCLNNQDCAIRSTSCKNHGGSVDCSLGIQLAFSGTDKHLSVLNSWYEVENLRQYSLYGLYSNLRDSLTGQYNKIF
Disordered Region (DISEMBL)
METIFFFLLLTTSCFSFLVESSDNNHMYSPCGDTKVERSDGFTFAIAFASRSSFFLNNSQQLSPCDRRLSLSSSTSQIAVFRPKVDEISLLTINTSSFSPDNYGGYMVAFAGRKYAARSLPAFVANSTYTVTSFTLALEFKKGRLQNLYWKRDGCSKCSGNSNFVCLNNQDCAIRSTSCKNHGGSVDCSLGIQLAFSGTDKHLSVLNSWYEVENLRQYSLYGLYSNLRDSLTGQYNKIF
Disordered Region (DISPRO)
METIFFFLLLTTSCFSFLVESSDNNHMYSPCGDTKVERSDGFTFAIAFASRSSFFLNNSQQLSPCDRRLSLSSSTSQIAVFRPKVDEISLLTINTSSFSPDNYGGYMVAFAGRKYAARSLPAFVANSTYTVTSFTLALEFKKGRLQNLYWKRDGCSKCSGNSNFVCLNNQDCAIRSTSCKNHGGSVDCSLGIQLAFSGTDKHLSVLNSWYEVENLRQYSLYGLYSNLRDSLTGQY*KIF
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
METIFFFLLLTTSCFSFLVESSDNNHMYSPCGDTKVERSDGFTFAIAFASRSSFFLNNSQQLSPCDRRLSLSSSTSQIAVFRPKVDEISLLTINTSSFSPDNYGGYMVAFAGRKYAARSLPAFVANSTYTVTSFTLALEFKKGRLQNLYWKRDGCSKCSGNSNFVCLNNQDCAIRSTSCKNHGGSVDCSLGIQLAFSGTDKHLSVLNSWYEVENLRQYSLYGLYSNLRDSLTGQYNKIF
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	239
255566179	243	conserved hypothetical protein [Ricinus	0.991	0.975	0.841	1e-110
224138274	244	predicted protein [Populus trichocarpa]	0.995	0.975	0.786	1e-107
224091463	246	predicted protein [Populus trichocarpa]	1.0	0.971	0.782	1e-107
88683134	243	expp1 protein precursor [Solanum tuberos	0.949	0.934	0.811	1e-104
297815522	252	predicted protein [Arabidopsis lyrata su	0.907	0.861	0.769	2e-99
449444821	262	PREDICTED: uncharacterized protein LOC10	0.920	0.839	0.770	2e-99
22331580	246	uncharacterized protein [Arabidopsis tha	0.916	0.890	0.762	5e-99
356539197	240	PREDICTED: uncharacterized protein LOC10	0.912	0.908	0.786	1e-98
359806074	242	uncharacterized protein LOC100818051 pre	0.912	0.900	0.786	3e-98
225439362	242	PREDICTED: uncharacterized protein LOC10	0.924	0.913	0.791	4e-96

>gi|255566179|ref|XP_002524077.1| conserved hypothetical protein [Ricinus communis] gi|223536645|gb|EEF38287.1| conserved hypothetical protein [Ricinus communis]

 Score =  402 bits (1032), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 201/239 (84%), Positives = 220/239 (92%), Gaps = 2/239 (0%)

Query: 3   TIFFFLLLTTSCFSFLVESSDNNHMYSPCGDTKVERSDGFTFAIAFASRSSFFLNN--SQ 60
           T    +++  +    +VES DNNH+YSPCGDTKV+R DGFTFAIAFA+R++FF NN  S 
Sbjct: 5   TAIILVVVALASSVLIVESGDNNHVYSPCGDTKVQREDGFTFAIAFAARNAFFYNNNNSL 64

Query: 61  QLSPCDRRLSLSSSTSQIAVFRPKVDEISLLTINTSSFSPDNYGGYMVAFAGRKYAARSL 120
           QLSPCD RLSLSS +SQI+VFRPKVDEISLLTINTSSFSPDNYGGYMVAFAGRKYAARSL
Sbjct: 65  QLSPCDSRLSLSSQSSQISVFRPKVDEISLLTINTSSFSPDNYGGYMVAFAGRKYAARSL 124

Query: 121 PAFVANSTYTVTSFTLALEFKKGRLQNLYWKRDGCSKCSGNSNFVCLNNQDCAIRSTSCK 180
           PAFVAN+TYTVTSFTL LEFKKGRLQNLYWKRDGCSKCSG++NFVCLNNQDCAIR++SCK
Sbjct: 125 PAFVANTTYTVTSFTLVLEFKKGRLQNLYWKRDGCSKCSGSNNFVCLNNQDCAIRTSSCK 184

Query: 181 NHGGSVDCSLGIQLAFSGTDKHLSVLNSWYEVENLRQYSLYGLYSNLRDSLTGQYNKIF 239
           NHGG+VDCSLGIQLAFSGTDKHLSVLNSWYEVENLRQYSLYGLYSNLRDSLTGQY+KIF
Sbjct: 185 NHGGTVDCSLGIQLAFSGTDKHLSVLNSWYEVENLRQYSLYGLYSNLRDSLTGQYSKIF 243

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224138274|ref|XP_002322773.1| predicted protein [Populus trichocarpa] gi|222867403|gb|EEF04534.1| predicted protein [Populus trichocarpa]

 Score =  392 bits (1008), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 188/239 (78%), Positives = 212/239 (88%), Gaps = 1/239 (0%)

Query: 1   METIFFFLLLTTSCFSFLVESSDNNHMYSPCGDTKVERSDGFTFAIAFASRSSFFLNNSQ 60
           ++ +  FL+       FLV+S D N ++SPC DT V+ SDGFTFAIAF+SR+SFF N+S 
Sbjct: 7   LKALLVFLVAIAPA-PFLVKSEDTNKVFSPCLDTTVQVSDGFTFAIAFSSRTSFFFNSSL 65

Query: 61  QLSPCDRRLSLSSSTSQIAVFRPKVDEISLLTINTSSFSPDNYGGYMVAFAGRKYAARSL 120
           QLSPCDRRL+L+   SQI+VFRPKVDEISLLTINTSSF P+NYGGYMVAFAGRKYAARSL
Sbjct: 66  QLSPCDRRLALTGQNSQISVFRPKVDEISLLTINTSSFYPENYGGYMVAFAGRKYAARSL 125

Query: 121 PAFVANSTYTVTSFTLALEFKKGRLQNLYWKRDGCSKCSGNSNFVCLNNQDCAIRSTSCK 180
           PAFVAN+TY+VTSFTL LEFKKGRLQNLYWKRDGC+KCSGNSNFVCLNNQDCAIR++ CK
Sbjct: 126 PAFVANNTYSVTSFTLVLEFKKGRLQNLYWKRDGCAKCSGNSNFVCLNNQDCAIRTSLCK 185

Query: 181 NHGGSVDCSLGIQLAFSGTDKHLSVLNSWYEVENLRQYSLYGLYSNLRDSLTGQYNKIF 239
           ++GGSVDCSLGIQLAFSGTDKH S LNSWYEVENLRQYSLYGLYSNLR+SLT QY+KIF
Sbjct: 186 SNGGSVDCSLGIQLAFSGTDKHFSALNSWYEVENLRQYSLYGLYSNLRNSLTSQYSKIF 244

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224091463|ref|XP_002309260.1| predicted protein [Populus trichocarpa] gi|222855236|gb|EEE92783.1| predicted protein [Populus trichocarpa]

 Score =  392 bits (1006), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 187/239 (78%), Positives = 208/239 (87%)

Query: 1   METIFFFLLLTTSCFSFLVESSDNNHMYSPCGDTKVERSDGFTFAIAFASRSSFFLNNSQ 60
           ++ +  FL+  TS     V+S + NH+YSPC DT V+ SDGFTF+IAF+S  +FF N++ 
Sbjct: 8   LKPLLLFLVTITSSTLLPVQSDNTNHVYSPCADTTVQVSDGFTFSIAFSSSKAFFFNSTL 67

Query: 61  QLSPCDRRLSLSSSTSQIAVFRPKVDEISLLTINTSSFSPDNYGGYMVAFAGRKYAARSL 120
           QLSPCD RLSL+S  SQI+VFRPKVDEISLLTINTSSFSP ++GGYMVAFAGRKYAARSL
Sbjct: 68  QLSPCDSRLSLTSQNSQISVFRPKVDEISLLTINTSSFSPGDFGGYMVAFAGRKYAARSL 127

Query: 121 PAFVANSTYTVTSFTLALEFKKGRLQNLYWKRDGCSKCSGNSNFVCLNNQDCAIRSTSCK 180
           PAFVANSTYTVTSFTL LEFKKGRLQNLYWKRDGC+KCSGNS FVCLNNQDCAIR++SC 
Sbjct: 128 PAFVANSTYTVTSFTLVLEFKKGRLQNLYWKRDGCAKCSGNSKFVCLNNQDCAIRTSSCI 187

Query: 181 NHGGSVDCSLGIQLAFSGTDKHLSVLNSWYEVENLRQYSLYGLYSNLRDSLTGQYNKIF 239
            +GGSVDCSLGIQLAFSGTDKH S LNSWYEVENLRQYSLYGLYSNLRDSLT QYN IF
Sbjct: 188 KNGGSVDCSLGIQLAFSGTDKHFSALNSWYEVENLRQYSLYGLYSNLRDSLTSQYNNIF 246

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|88683134|emb|CAJ77501.1| expp1 protein precursor [Solanum tuberosum]

 Score =  384 bits (985), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 185/228 (81%), Positives = 203/228 (89%), Gaps = 1/228 (0%)

Query: 13  SCFSFLVES-SDNNHMYSPCGDTKVERSDGFTFAIAFASRSSFFLNNSQQLSPCDRRLSL 71
           S  + L +S SD NH+YSPC D KV+RSDGF+F IAFASR+SFF+N+S QLSPCD+RLSL
Sbjct: 16  SSLTLLAQSRSDTNHVYSPCADAKVQRSDGFSFGIAFASRTSFFVNSSVQLSPCDKRLSL 75

Query: 72  SSSTSQIAVFRPKVDEISLLTINTSSFSPDNYGGYMVAFAGRKYAARSLPAFVANSTYTV 131
           SS+ SQIAVFRPKVDEISLLTINTSSF PD+YGGYMVAFAGRKYAARSLPAFVAN T+TV
Sbjct: 76  SSANSQIAVFRPKVDEISLLTINTSSFFPDSYGGYMVAFAGRKYAARSLPAFVANGTFTV 135

Query: 132 TSFTLALEFKKGRLQNLYWKRDGCSKCSGNSNFVCLNNQDCAIRSTSCKNHGGSVDCSLG 191
           TSFTL  EFKKGRL+NLYWKRDGCS CSGNSNFVCLN QDCAIR+ +CKN GG+VDCSLG
Sbjct: 136 TSFTLVHEFKKGRLENLYWKRDGCSSCSGNSNFVCLNGQDCAIRTNNCKNRGGNVDCSLG 195

Query: 192 IQLAFSGTDKHLSVLNSWYEVENLRQYSLYGLYSNLRDSLTGQYNKIF 239
           IQL FSGTDKH SV NSW+EV+NLRQYSLYGLYSNLR SLT QYNK F
Sbjct: 196 IQLTFSGTDKHASVFNSWFEVKNLRQYSLYGLYSNLRGSLTDQYNKFF 243

Source: Solanum tuberosum

Species: Solanum tuberosum

Genus: Solanum

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297815522|ref|XP_002875644.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297321482|gb|EFH51903.1| predicted protein [Arabidopsis lyrata subsp. lyrata]

 Score =  367 bits (942), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 167/217 (76%), Positives = 193/217 (88%)

Query: 23  DNNHMYSPCGDTKVERSDGFTFAIAFASRSSFFLNNSQQLSPCDRRLSLSSSTSQIAVFR 82
           + N++YSPC DT+++RSDGFTF IAF+SR SFFLN +  LSPCDRRLSL++  SQ ++FR
Sbjct: 36  NTNNIYSPCSDTRIQRSDGFTFGIAFSSRPSFFLNQTVLLSPCDRRLSLAAMNSQFSLFR 95

Query: 83  PKVDEISLLTINTSSFSPDNYGGYMVAFAGRKYAARSLPAFVANSTYTVTSFTLALEFKK 142
           PK+DEISLL+INTS+F PDNYGGYMVAFAGRKYAARS+PAF+ANST+ VTSFTL +EF+K
Sbjct: 96  PKIDEISLLSINTSAFFPDNYGGYMVAFAGRKYAARSIPAFIANSTFIVTSFTLVMEFQK 155

Query: 143 GRLQNLYWKRDGCSKCSGNSNFVCLNNQDCAIRSTSCKNHGGSVDCSLGIQLAFSGTDKH 202
           GRLQNLYWKRDGC+ C GN NFVCLN QDCAIR+ SCK  GGSVDCSLGIQLAFSGTDKH
Sbjct: 156 GRLQNLYWKRDGCASCKGNQNFVCLNKQDCAIRTPSCKGRGGSVDCSLGIQLAFSGTDKH 215

Query: 203 LSVLNSWYEVENLRQYSLYGLYSNLRDSLTGQYNKIF 239
           L+VLNSWYEVENL+QYSLYGLYSNL+ SLT Q+N  F
Sbjct: 216 LAVLNSWYEVENLKQYSLYGLYSNLKSSLTNQFNNFF 252

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449444821|ref|XP_004140172.1| PREDICTED: uncharacterized protein LOC101221211 [Cucumis sativus] gi|449523305|ref|XP_004168664.1| PREDICTED: uncharacterized LOC101221211 [Cucumis sativus]

 Score =  367 bits (942), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 171/222 (77%), Positives = 197/222 (88%), Gaps = 2/222 (0%)

Query: 20  ESSDNNHMYSPCGDTKVERSDGFTFAIAFASRSSFFLNNSQQLSPCDRRLSLSSSTSQIA 79
           E+++ N++Y PC DTK++RSDGFTF IAF+SR SFF N S QLSPCDRRLSL+S  SQ+A
Sbjct: 41  EAANTNNVYQPCADTKIQRSDGFTFGIAFSSRDSFFANQSHQLSPCDRRLSLASLNSQLA 100

Query: 80  VFRPKVDEISLLTINTSSFSPDNYGGYMVAFAGRKYAARSLPAFVANSTYTVTSFTLALE 139
           VFRP+VD+ISLL+INTS F PD +GGYMVAFAGRKYAARS PAFVANST+ VTSFTL LE
Sbjct: 101 VFRPRVDQISLLSINTSDFFPDAFGGYMVAFAGRKYAARSQPAFVANSTFIVTSFTLVLE 160

Query: 140 FKKGRLQNLYWKRDGCSKCSGN--SNFVCLNNQDCAIRSTSCKNHGGSVDCSLGIQLAFS 197
           F+KGRLQNLYWKRDGC+ CSG   S++VCLNNQDCAIR++SC+N GG+VDCSLGIQL FS
Sbjct: 161 FQKGRLQNLYWKRDGCASCSGKSRSSYVCLNNQDCAIRTSSCRNRGGNVDCSLGIQLTFS 220

Query: 198 GTDKHLSVLNSWYEVENLRQYSLYGLYSNLRDSLTGQYNKIF 239
           GTDKHLS LNSWYEV+NLRQYSLY +YSNLRDSLTGQYN+ F
Sbjct: 221 GTDKHLSALNSWYEVKNLRQYSLYNVYSNLRDSLTGQYNRFF 262

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|22331580|ref|NP_190001.2| uncharacterized protein [Arabidopsis thaliana] gi|17529172|gb|AAL38812.1| unknown protein [Arabidopsis thaliana] gi|23297558|gb|AAN12895.1| unknown protein [Arabidopsis thaliana] gi|332644348|gb|AEE77869.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  366 bits (939), Expect = 5e-99,   Method: Compositional matrix adjust.
 Identities = 167/219 (76%), Positives = 193/219 (88%)

Query: 21  SSDNNHMYSPCGDTKVERSDGFTFAIAFASRSSFFLNNSQQLSPCDRRLSLSSSTSQIAV 80
           S + N +YSPC DT+++RSDGFTF IAF+SR SFF+N +  LSPCDRRLSL++  SQ +V
Sbjct: 28  SGNTNTIYSPCSDTRIQRSDGFTFGIAFSSRPSFFINQTVLLSPCDRRLSLAAMNSQFSV 87

Query: 81  FRPKVDEISLLTINTSSFSPDNYGGYMVAFAGRKYAARSLPAFVANSTYTVTSFTLALEF 140
           FRPK+DEISLL+INTS+F PDNYGGYMVAFAGRKYAARS+PAF+ANST+ VTSFTL +EF
Sbjct: 88  FRPKIDEISLLSINTSAFFPDNYGGYMVAFAGRKYAARSIPAFIANSTFIVTSFTLVMEF 147

Query: 141 KKGRLQNLYWKRDGCSKCSGNSNFVCLNNQDCAIRSTSCKNHGGSVDCSLGIQLAFSGTD 200
           +KGRLQNLYWKRDGC+ C GN NFVCLN QDCAIR+ SCK  GG+VDCSLGIQLAFSGTD
Sbjct: 148 QKGRLQNLYWKRDGCASCKGNQNFVCLNKQDCAIRTPSCKGRGGAVDCSLGIQLAFSGTD 207

Query: 201 KHLSVLNSWYEVENLRQYSLYGLYSNLRDSLTGQYNKIF 239
           KHL+VLNSWYEVENL+QYSLYGLYSNL+ SLT Q+N  F
Sbjct: 208 KHLAVLNSWYEVENLKQYSLYGLYSNLKSSLTNQFNNFF 246

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356539197|ref|XP_003538086.1| PREDICTED: uncharacterized protein LOC100814491 [Glycine max]

 Score =  365 bits (936), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 173/220 (78%), Positives = 194/220 (88%), Gaps = 2/220 (0%)

Query: 22  SDNNHMYSPCGDTKVERSDGFTFAIAFASRSSFFLNNSQ--QLSPCDRRLSLSSSTSQIA 79
           ++ N++Y PC D +++RSDGFTF IAF+SR SFF N +Q  QLSPCDRRLSLS S SQ+A
Sbjct: 21  TNTNNVYQPCADARIQRSDGFTFGIAFSSRDSFFYNQNQSLQLSPCDRRLSLSFSNSQLA 80

Query: 80  VFRPKVDEISLLTINTSSFSPDNYGGYMVAFAGRKYAARSLPAFVANSTYTVTSFTLALE 139
           +FRP+VDEISLLTINTSSF PD+YGGYMVAFAGRKYAARS  AFVANSTYTVTSFTL LE
Sbjct: 81  LFRPRVDEISLLTINTSSFFPDSYGGYMVAFAGRKYAARSPLAFVANSTYTVTSFTLVLE 140

Query: 140 FKKGRLQNLYWKRDGCSKCSGNSNFVCLNNQDCAIRSTSCKNHGGSVDCSLGIQLAFSGT 199
           F++GRLQN YWKRDGCS C   SNF+CLN QDCAIR++SCK  GG+VDCSLGIQLAFSGT
Sbjct: 141 FQRGRLQNFYWKRDGCSSCKEKSNFICLNKQDCAIRTSSCKGRGGAVDCSLGIQLAFSGT 200

Query: 200 DKHLSVLNSWYEVENLRQYSLYGLYSNLRDSLTGQYNKIF 239
           D+HL VLNSW+EVENLRQYSLYGLYSNLRDSLTGQYNK F
Sbjct: 201 DRHLRVLNSWFEVENLRQYSLYGLYSNLRDSLTGQYNKFF 240

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359806074|ref|NP_001240927.1| uncharacterized protein LOC100818051 precursor [Glycine max] gi|255644951|gb|ACU22975.1| unknown [Glycine max]

 Score =  363 bits (933), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 173/220 (78%), Positives = 193/220 (87%), Gaps = 2/220 (0%)

Query: 22  SDNNHMYSPCGDTKVERSDGFTFAIAFASRSSFFLNNSQ--QLSPCDRRLSLSSSTSQIA 79
           ++ N +Y PC D +++RSDGFTF IAF+SR SFF N +Q  QLSPCDRRLSLSSS +Q+A
Sbjct: 23  TNTNSVYHPCSDARIQRSDGFTFGIAFSSRDSFFYNQNQSLQLSPCDRRLSLSSSNAQLA 82

Query: 80  VFRPKVDEISLLTINTSSFSPDNYGGYMVAFAGRKYAARSLPAFVANSTYTVTSFTLALE 139
           +FRP+VDEISLLTINTSSF PDNYGGYMVAFAG+KYAARS  AFVANSTYTVTSFTL LE
Sbjct: 83  LFRPRVDEISLLTINTSSFFPDNYGGYMVAFAGKKYAARSPLAFVANSTYTVTSFTLVLE 142

Query: 140 FKKGRLQNLYWKRDGCSKCSGNSNFVCLNNQDCAIRSTSCKNHGGSVDCSLGIQLAFSGT 199
           F++GRL NLYWKRDGCS C G SN VCLN QDCAIR++SCK  GG+VDCSLGIQLAFSGT
Sbjct: 143 FQRGRLHNLYWKRDGCSSCKGKSNLVCLNKQDCAIRTSSCKGRGGAVDCSLGIQLAFSGT 202

Query: 200 DKHLSVLNSWYEVENLRQYSLYGLYSNLRDSLTGQYNKIF 239
           D+HL VLNSW+EVENLRQYSLYGLYSNLRDSLT QYNK F
Sbjct: 203 DRHLRVLNSWFEVENLRQYSLYGLYSNLRDSLTSQYNKFF 242

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225439362|ref|XP_002271183.1| PREDICTED: uncharacterized protein LOC100249592 [Vitis vinifera] gi|296089351|emb|CBI39123.3| unnamed protein product [Vitis vinifera]

 Score =  356 bits (914), Expect = 4e-96,   Method: Compositional matrix adjust.
 Identities = 178/225 (79%), Positives = 192/225 (85%), Gaps = 4/225 (1%)

Query: 18  LVESSDNNHMYSPCGDTKVERSDGFTFAIAFASRSSFFLNNSQQLSPCDRRLSLSSSTSQ 77
             ES DNN ++SPC DT V++SDGFTF IAFASR  F  NN+  LSPCDRRL+LSS  SQ
Sbjct: 19  FAESGDNNRVFSPCADTTVQKSDGFTFGIAFASRDKFSYNNTL-LSPCDRRLALSSQNSQ 77

Query: 78  IAVFRPKVDEISLLTINT-SSFSPDNYGGYMVAFAGRKYAARSLPAFVANSTYTVTSFTL 136
           IA FRPKVDEISLL+INT SSF P NYGGYMVAFAGRKYAARS  AFV+NSTYTVTSFTL
Sbjct: 78  IAAFRPKVDEISLLSINTTSSFFPANYGGYMVAFAGRKYAARSSLAFVSNSTYTVTSFTL 137

Query: 137 ALEFKKGRLQNLYWKRDGCSKCSGNSNFVCLNNQDCAIRSTSCK--NHGGSVDCSLGIQL 194
            LEFKKGRLQNLYWKRDGCS CSG++ FVCLNNQDCAI++T CK    G SVDCSLGIQL
Sbjct: 138 VLEFKKGRLQNLYWKRDGCSACSGDNKFVCLNNQDCAIKTTDCKGQGQGASVDCSLGIQL 197

Query: 195 AFSGTDKHLSVLNSWYEVENLRQYSLYGLYSNLRDSLTGQYNKIF 239
           AFSGTDKH SVLNSWYEV+NLRQYSLYGLY+NL DSLT QYNKIF
Sbjct: 198 AFSGTDKHYSVLNSWYEVKNLRQYSLYGLYANLADSLTSQYNKIF 242

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	239
TAIR|locus:2081413	246	AT3G44150 "AT3G44150" [Arabido	0.916	0.890	0.712	2e-86
TAIR|locus:2081571	246	AT3G11800 "AT3G11800" [Arabido	0.916	0.890	0.638	3.6e-73
TAIR|locus:2044606	367	AT2G15910 "AT2G15910" [Arabido	0.895	0.583	0.526	4.5e-59
TAIR|locus:2114500	128	AT3G48630 "AT3G48630" [Arabido	0.217	0.406	0.596	3.9e-12

TAIR|locus:2081413 AT3G44150 "AT3G44150" [Arabidopsis thaliana (taxid:3702)]

 Score = 864 (309.2 bits), Expect = 2.0e-86, P = 2.0e-86
 Identities = 156/219 (71%), Positives = 181/219 (82%)

Query:    21 SSDNNHMYSPCGDTKVERSDGXXXXXXXXXXXXXXLNNSQQLSPCDRRLSLSSSTSQIAV 80
             S + N +YSPC DT+++RSDG              +N +  LSPCDRRLSL++  SQ +V
Sbjct:    28 SGNTNTIYSPCSDTRIQRSDGFTFGIAFSSRPSFFINQTVLLSPCDRRLSLAAMNSQFSV 87

Query:    81 FRPKVDEISLLTINTSSFSPDNYGGYMVAFAGRKYAARSLPAFVANSTYTVTSFTLALEF 140
             FRPK+DEISLL+INTS+F PDNYGGYMVAFAGRKYAARS+PAF+ANST+ VTSFTL +EF
Sbjct:    88 FRPKIDEISLLSINTSAFFPDNYGGYMVAFAGRKYAARSIPAFIANSTFIVTSFTLVMEF 147

Query:   141 KKGRLQNLYWKRDGCSKCSGNSNFVCLNNQDCAIRSTSCKNHGGSVDCSLGIQLAFSGTD 200
             +KGRLQNLYWKRDGC+ C GN NFVCLN QDCAIR+ SCK  GG+VDCSLGIQLAFSGTD
Sbjct:   148 QKGRLQNLYWKRDGCASCKGNQNFVCLNKQDCAIRTPSCKGRGGAVDCSLGIQLAFSGTD 207

Query:   201 KHLSVLNSWYEVENLRQYSLYGLYSNLRDSLTGQYNKIF 239
             KHL+VLNSWYEVENL+QYSLYGLYSNL+ SLT Q+N  F
Sbjct:   208 KHLAVLNSWYEVENLKQYSLYGLYSNLKSSLTNQFNNFF 246

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:2081571 AT3G11800 "AT3G11800" [Arabidopsis thaliana (taxid:3702)]

 Score = 739 (265.2 bits), Expect = 3.6e-73, P = 3.6e-73
 Identities = 145/227 (63%), Positives = 169/227 (74%)

Query:    20 ESSDNNHMYSPCGDTKVERSDGXXXXXXXXXXXXXXLNN---SQQLSPCDRR-LSLSSST 75
             E+ DNN +YSPC D+ V   DG                N   S Q SPCD R LSL+ + 
Sbjct:    21 EAGDNNQVYSPCSDSTVAIGDGFTFGIAFAAKDSFFSTNRSKSVQYSPCDHRHLSLNGN- 79

Query:    76 SQIAVFRPKVDEISLLTINTSS---FSPDNYGGYMVAFAGRKYAARSLPAFVANSTYTVT 132
             S++AVFRPKVDEI+LLTINTSS   F PD   GYMVAFAG KYAARSLP  VA+S + VT
Sbjct:    80 SEVAVFRPKVDEITLLTINTSSSSSFRPDASKGYMVAFAGAKYAARSLPIMVADSNHIVT 139

Query:   133 SFTLALEFKKGRLQNLYWKRDGCSKCSGNSNFVCLNNQDCAIRSTSCKNHGGSVDCSLGI 192
             SFTL LEF+KGRL+N++WK+DGCSKCSG+S FVCLN ++CAI+  +CKN GG VDCSLGI
Sbjct:   140 SFTLVLEFQKGRLENMFWKKDGCSKCSGDSKFVCLNKEECAIKPQNCKNQGGQVDCSLGI 199

Query:   193 QLAFSGTDKHLSVLNSWYEVENLRQYSLYGLYSNLRDSLTGQYNKIF 239
             QLAFSGTDKH + LNSWYEV NL+QYSLYGLYSNL+DSLT  +  IF
Sbjct:   200 QLAFSGTDKHYTALNSWYEVANLKQYSLYGLYSNLKDSLTNPFKNIF 246

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2044606 AT2G15910 "AT2G15910" [Arabidopsis thaliana (taxid:3702)]

 Score = 606 (218.4 bits), Expect = 4.5e-59, P = 4.5e-59
 Identities = 119/226 (52%), Positives = 157/226 (69%)

Query:    19 VESSDNNHMYSPCGDTKVERSDGXXXXXXXXXXXXXXLNNSQQLSPCDRRLSLSSSTSQI 78
             V ++DNN +YSPC DT++ + DG              L+  Q LSPCD RL L++  +Q+
Sbjct:   140 VGAADNNPVYSPCSDTQISKGDGFTIGIAISSKEAFFLDQVQ-LSPCDTRLGLAAKMAQL 198

Query:    79 AVFRPKVDEISLLTINTSSFSPDNYGGYMVAFAGRKYAARSLPAFVANSTYTVTSFTLA- 137
             A+FRPKVDEISLL+I+TS F+P   GG+MV FAG KYAARS P  VA+ + T+T+FTL  
Sbjct:   199 ALFRPKVDEISLLSIDTSKFNPSEAGGFMVGFAGSKYAARSYPVKVADGSNTITAFTLVM 258

Query:   138 --------LEFKKGRLQNLYWKRDGCSKC--SGNSNFVCLNNQDCAIRSTSCKNHGGSVD 187
                     LEF+KG LQNL+WK  GC  C  +G+S+ VCLN  DCA+ ++ CK +GG  +
Sbjct:   259 KLTLSPLVLEFQKGVLQNLFWKSFGCDLCKGTGSSSSVCLNGTDCAVPTSKCKANGGQAN 318

Query:   188 CSLGIQLAFSGTDKHLSVLNSWYEVENLRQYSLYGLYSNLRDSLTG 233
             C++GIQ+AFSGTD++L  LN+WYEV NLRQYSL  LY+N  DSL+G
Sbjct:   319 CNIGIQVAFSGTDRNLESLNTWYEVNNLRQYSLTDLYANAVDSLSG 364

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0005737 "cytoplasm" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2114500 AT3G48630 "AT3G48630" [Arabidopsis thaliana (taxid:3702)]

 Score = 163 (62.4 bits), Expect = 3.9e-12, P = 3.9e-12
 Identities = 31/52 (59%), Positives = 38/52 (73%)

Query:   106 YMVAFAGRKYAARSLPAFVANSTYTVTSFTLALEFKKGRLQNLYWKRDGCSK 157
             Y V   G +  +   PAF+ANST+ VTSFT  +EF+KGRLQNLYWKRD C+K
Sbjct:     2 YNVGTRGSEIRSEVDPAFIANSTFIVTSFTWVMEFQKGRLQNLYWKRDVCAK 53


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.316   0.130   0.388    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      239       211   0.00081  112 3  11 22  0.38    33
                                                     31  0.48    35


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  4
  No. of states in DFA:  607 (65 KB)
  Total size of DFA:  182 KB (2105 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  16.42u 0.11s 16.53t   Elapsed:  00:00:00
  Total cpu time:  16.42u 0.11s 16.53t   Elapsed:  00:00:00
  Start:  Fri May 10 10:07:26 2013   End:  Fri May 10 10:07:26 2013

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

No hit with probability above 80.00

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00