Citrus Sinensis ID: 026475

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------24
Protein Sequence
MLKERLQKMGILGCITCIVGSVVIVIHAPQEHTPNSVQEIWALATQPDFLIYVAATVSVVLALVLHFEPRCGQTNILVYLGICSLMGSLTVVSIKAIGIAIKLTLDGISQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHATREHEQTTAPVGTVTWYVSGDSLKGAEEEHLITIHNSDYYVQ
Secondary Structure (PSIPRED)
cccccccccccEEEEEEEEcEEEEEEEcccccccccHHHHHHHHccccEEEHHHHHHHHHHHHHHEEccccccEEEEEEEEEEccccccHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEccEEEEHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHEEEEEccccccccccccccccEEEccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHccEEEEEEEEccEEEEEEcccccccccHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHccccccccEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccEEEcccccHEcc
Coil and Loop (DISEMBL)
MLKERLQKMGILGCITCIVGSVVIVIhapqehtpnSVQEIWALATQPDFLIYVAATVSVVLALVLHfeprcgqtnILVYLGICSLMGSLTVVSIKAIGIAIKLTLDgisqiaypqTWFFLTVAAVCVVTQLNYLNKALDTfnaaivspVYYVMFTTLTIIASAIMfkdwsgqdvsgiASEICGFITVLSGTIILHAtreheqttapvgtvtwyvsgdslkgaeeehlitihnsdyyvq
Flexible Loop (DISEMBL)
mlkerlqkMGILGCITCIVGSVVIVIHAPQEHTPNSVQEIWALATQPDFLIYVAATVSVVLALVLHFEPRCGQTNILVYLGICSLMGSLTVVSIKAIGIAIKLTLDGISQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHATreheqttapvgtvTWYVSGDSLkgaeeehlitihnsdyyvq
Low Complexity Region (SEG)
MLKERLQKMGILGCITCIVGSVVIVIHAPQEHTPNSVQEIWALATQPDFLIYvaatvsvvlalvlHFEPRCGQTNILVYLGICSLMGSLTVVSIKAIGIAIKLTLDGISQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHATREHEQTTAPVGTVTWYVSGDSLKGAEEEHLITIHNSDYYVQ
Disordered region (IsUnstruct)
*******KMGILGCITCIVGSVVIVIHAPQEHTPNSVQEIWALATQPDFLIYVAATVSVVLALVLHFEPRCGQTNILVYLGICSLMGSLTVVSIKAIGIAIKLTLDGISQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHATREHEQTTAPVGTVTWYVSGDSLKGAEEEHLITIHNSDY***
Disordered Region (DISOPRED)
MLKERLQKMGILGCITCIVGSVVIVIHAPQEHTPNSVQEIWALATQPDFLIYVAATVSVVLALVLHFEPRCGQTNILVYLGICSLMGSLTVVSIKAIGIAIKLTLDGISQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIIL********************************************
Disordered Region (DISEMBL)
MLKERLQKMGILGCITCIVGSVVIVIHAPQEHTPNSVQEIWALATQPDFLIYVAATVSVVLALVLHFEPRCGQTNILVYLGICSLMGSLTVVSIKAIGIAIKLTLDGISQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHATREHEQTTAPVGTVTWYVSGDSLKGAEEEHLITIHNSDYYVQ
Disordered Region (DISPRO)
MLKERLQKMGILGCITCIVGSVVIVIHAPQEHTPNSVQEIWALATQPDFLIYVAATVSVVLALVLHFEPRCGQTNILVYLGICSLMGSLTVVSIKAIGIAIKLTLDGISQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHATREHEQTTAPVGTVTWYVS**SLKGA*EEHLITIHNSDYYVQ
Transmembrane Helix (TMHMM)
iiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MLKERLQKMGILGCITCIVGSVVIVIHAPQEHTPNSVQEIWALATQPDFLIYVAATVSVVLALVLHFEPRCGQTNILVYLGICSLMGSLTVVSIKAIGIAIKLTLDGISQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHATREHEQTTAPVGTVTWYVSGDSLKGAEEEHLITIHNSDYYVQ
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	238	2.2.26 [Sep-21-2011]
Q8BMW7	416	Magnesium transporter NIP	yes	no	0.949	0.543	0.400	6e-44
Q3SWX0	360	Magnesium transporter NIP	yes	no	0.836	0.552	0.442	3e-43
Q5R7Q3	360	Magnesium transporter NIP	yes	no	0.827	0.547	0.442	3e-43
Q8N8Q9	360	Magnesium transporter NIP	no	no	0.827	0.547	0.442	3e-43
Q9JJC8	359	Magnesium transporter NIP	no	no	0.836	0.554	0.432	4e-43
Q5RDB8	410	Magnesium transporter NIP	no	no	0.852	0.495	0.428	6e-40
Q6NVV3	410	Magnesium transporter NIP	no	no	0.852	0.495	0.423	1e-39
Q0D2K0	466	Magnesium transporter NIP	no	no	0.861	0.439	0.365	4e-38
Q8BZF2	406	Magnesium transporter NIP	no	no	0.840	0.492	0.355	2e-37
Q7RTP0	329	Magnesium transporter NIP	no	no	0.844	0.610	0.374	1e-30

>sp|Q8BMW7|NIPA3_MOUSE Magnesium transporter NIPA3 OS=Mus musculus GN=Nipal1 PE=1 SV=2

 Score =  177 bits (449), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 95/237 (40%), Positives = 139/237 (58%), Gaps = 11/237 (4%)

Query: 1   MLKERLQKMGILGCITCIVGSVVIVIHAPQEHTPNSVQEIWALATQPDFLIYVAATVSVV 60
            L ERL   G +GCI  ++GS V+VIHAPQE    S+ E+      P F+ +      + 
Sbjct: 161 FLNERLNIHGKIGCILSVLGSTVMVIHAPQEGEVTSLHEMEMKLRDPGFVSFAVIISVIS 220

Query: 61  LALVLHFEPRCGQTNILVYLGICSLMGSLTVVSIKAIGIAIKLTLDGISQIAYPQTWFFL 120
           L L+L   P+ GQTNILVY+ ICSL+G+ +V S+K +GIAIK  L+       P  +  L
Sbjct: 221 LVLILIVAPKKGQTNILVYIAICSLIGAFSVSSVKGLGIAIKELLERKPVYKDPLFFILL 280

Query: 121 TVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASE 180
           T+ A+ V TQ+NYLNKALDTFN ++V+P+YYV FT++ +  SAI+F++W G     I   
Sbjct: 281 TMLALSVTTQINYLNKALDTFNTSLVTPIYYVFFTSMVVTCSAILFQEWYGMKAGDIIGT 340

Query: 181 ICGFITVLSGTIILHATREHEQTTAPVGTVTWYVSGDSLKGAEEEHLITIHNSDYYV 237
           + GF T+++G  +LHA +           +TW    + +  A++E L    N + YV
Sbjct: 341 LSGFFTIINGIFLLHAFKNTN--------ITW---SELMSTAKKEALSPNGNQNSYV 386

Acts as a Mg(2+) transporter. Can also transport other divalent cations such as Fe(2+), Sr(2+), Ba(2+), Mn(2+), Cu(2+) and Co(2+) but to a much less extent than Mg(2+).
Mus musculus (taxid: 10090)

>sp|Q3SWX0|NIPA2_BOVIN Magnesium transporter NIPA2 OS=Bos taurus GN=NIPA2 PE=2 SV=1

 Score =  175 bits (443), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 88/199 (44%), Positives = 123/199 (61%)

Query: 1   MLKERLQKMGILGCITCIVGSVVIVIHAPQEHTPNSVQEIWALATQPDFLIYVAATVSVV 60
            L ERL   G +GC+  I+GS V+VIHAP+E    ++ E+      P F+++    V V 
Sbjct: 103 FLNERLNLHGKIGCLLSILGSTVMVIHAPKEEEIETLNEMSHKLGDPGFVVFATLVVIVS 162

Query: 61  LALVLHFEPRCGQTNILVYLGICSLMGSLTVVSIKAIGIAIKLTLDGISQIAYPQTWFFL 120
           L L+    PR GQTNILVY+ ICS++G+++V   K +GIAIK    G   + +P TW  L
Sbjct: 163 LILIFVVGPRHGQTNILVYITICSVIGAVSVSCAKGLGIAIKELFAGKPVLQHPLTWILL 222

Query: 121 TVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASE 180
               VCV TQ+NYLN+ALD FN +IV+P+YYV FTT  I  SAI+FK+W    V  +   
Sbjct: 223 LSLIVCVSTQINYLNRALDIFNTSIVTPIYYVFFTTSVITCSAILFKEWQDMPVDDVIGT 282

Query: 181 ICGFITVLSGTIILHATRE 199
           + GF T++ G  +LHA ++
Sbjct: 283 LSGFFTIIVGIFLLHAFKD 301

Acts as a selective Mg(2+) transporter.

Bos taurus (taxid: 9913)

>sp|Q5R7Q3|NIPA2_PONAB Magnesium transporter NIPA2 OS=Pongo abelii GN=NIPA2 PE=2 SV=1

 Score =  174 bits (442), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 89/201 (44%), Positives = 128/201 (63%), Gaps = 4/201 (1%)

Query: 1   MLKERLQKMGILGCITCIVGSVVIVIHAPQEHTPNSVQEIWALATQPDFLIYVAATVSVV 60
            L ERL   G +GC+  I+GS V+VIHAP+E    ++ E+      P F+++  AT+ V+
Sbjct: 103 FLNERLNLHGKIGCLLSILGSTVMVIHAPKEEEIETLNEMSHKLGDPGFVVF--ATLVVI 160

Query: 61  LALVLHF--EPRCGQTNILVYLGICSLMGSLTVVSIKAIGIAIKLTLDGISQIAYPQTWF 118
           +AL+L F   PR GQTNILVY+ ICS++G+ +V  +K +GIAIK    G   + +P  W 
Sbjct: 161 VALILIFVVGPRHGQTNILVYITICSVIGAFSVSCVKGLGIAIKELFAGKPVLRHPLAWI 220

Query: 119 FLTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIA 178
            L    VCV TQ+NYLN+ALD FN +IV+P+YYV FTT  +  SAI+FK+W    V  + 
Sbjct: 221 LLLSLIVCVSTQINYLNRALDIFNTSIVTPIYYVFFTTSVLTCSAILFKEWQDMPVDDVI 280

Query: 179 SEICGFITVLSGTIILHATRE 199
             + GF T++ G  +LHA ++
Sbjct: 281 GTLSGFFTIIVGIFLLHAFKD 301

Acts as a selective Mg(2+) transporter.

Pongo abelii (taxid: 9601)

>sp|Q8N8Q9|NIPA2_HUMAN Magnesium transporter NIPA2 OS=Homo sapiens GN=NIPA2 PE=2 SV=1

 Score =  174 bits (442), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 89/201 (44%), Positives = 128/201 (63%), Gaps = 4/201 (1%)

Query: 1   MLKERLQKMGILGCITCIVGSVVIVIHAPQEHTPNSVQEIWALATQPDFLIYVAATVSVV 60
            L ERL   G +GC+  I+GS V+VIHAP+E    ++ E+      P F+++  AT+ V+
Sbjct: 103 FLNERLNLHGKIGCLLSILGSTVMVIHAPKEEEIETLNEMSHKLGDPGFVVF--ATLVVI 160

Query: 61  LALVLHF--EPRCGQTNILVYLGICSLMGSLTVVSIKAIGIAIKLTLDGISQIAYPQTWF 118
           +AL+L F   PR GQTNILVY+ ICS++G+ +V  +K +GIAIK    G   + +P  W 
Sbjct: 161 VALILIFVVGPRHGQTNILVYITICSVIGAFSVSCVKGLGIAIKELFAGKPVLRHPLAWI 220

Query: 119 FLTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIA 178
            L    VCV TQ+NYLN+ALD FN +IV+P+YYV FTT  +  SAI+FK+W    V  + 
Sbjct: 221 LLLSLIVCVSTQINYLNRALDIFNTSIVTPIYYVFFTTSVLTCSAILFKEWQDMPVDDVI 280

Query: 179 SEICGFITVLSGTIILHATRE 199
             + GF T++ G  +LHA ++
Sbjct: 281 GTLSGFFTIIVGIFLLHAFKD 301

Acts as a selective Mg(2+) transporter.

Homo sapiens (taxid: 9606)

>sp|Q9JJC8|NIPA2_MOUSE Magnesium transporter NIPA2 OS=Mus musculus GN=Nipa2 PE=1 SV=1

 Score =  174 bits (442), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 86/199 (43%), Positives = 122/199 (61%)

Query: 1   MLKERLQKMGILGCITCIVGSVVIVIHAPQEHTPNSVQEIWALATQPDFLIYVAATVSVV 60
            L ERL   G +GC+  I+GS V+VIHAP+E    ++ E+      P F+++    V V 
Sbjct: 103 FLNERLNLHGKIGCLLSILGSTVMVIHAPKEEEIETLNEMSHKLGDPGFVVFATFVVIVA 162

Query: 61  LALVLHFEPRCGQTNILVYLGICSLMGSLTVVSIKAIGIAIKLTLDGISQIAYPQTWFFL 120
           L  +    PR GQTNILVY+ ICS++G+ +V  +K +GIAIK  L G   + +P  W  L
Sbjct: 163 LIFIFVVGPRHGQTNILVYITICSVIGAFSVSCVKGLGIAIKELLAGKPVLQHPLAWILL 222

Query: 121 TVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASE 180
               VCV TQ+NYLN+ALD FN +IV+P+YYV FTT  +  SAI+FK+W    V  +   
Sbjct: 223 FSLVVCVSTQINYLNRALDIFNTSIVTPIYYVFFTTSVLTCSAILFKEWQDMPVDDVIGT 282

Query: 181 ICGFITVLSGTIILHATRE 199
           + GF T++ G  +LHA ++
Sbjct: 283 LSGFFTIIVGIFLLHAFKD 301

Acts as a selective Mg(2+) transporter.

Mus musculus (taxid: 10090)

>sp|Q5RDB8|NIPA3_PONAB Magnesium transporter NIPA3 OS=Pongo abelii GN=NIPAL1 PE=2 SV=1

 Score =  164 bits (414), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 87/203 (42%), Positives = 124/203 (61%)

Query: 1   MLKERLQKMGILGCITCIVGSVVIVIHAPQEHTPNSVQEIWALATQPDFLIYVAATVSVV 60
            L E L   G +GCI  I+GS V+VIHAPQE    S+ E+      P F+ +      + 
Sbjct: 161 FLNEHLNIHGKIGCILSILGSTVMVIHAPQEEEVTSLHEMEMKLRDPGFISFAVIVTVIS 220

Query: 61  LALVLHFEPRCGQTNILVYLGICSLMGSLTVVSIKAIGIAIKLTLDGISQIAYPQTWFFL 120
           L L+L   P+ GQTNILVY+ ICSL+G+ +V S+K +GIAIK  ++      +P  +  L
Sbjct: 221 LVLILIVAPKKGQTNILVYISICSLIGAFSVSSVKGLGIAIKELIEWKPVYKHPLVFVLL 280

Query: 121 TVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASE 180
            V  + V TQ+NYLNKALDTFN +IV+P+YYV FT++ +  SAI+F++W G     I   
Sbjct: 281 AVLVLSVTTQINYLNKALDTFNTSIVTPIYYVFFTSMVVTCSAILFQEWYGMTAGDIIGT 340

Query: 181 ICGFITVLSGTIILHATREHEQT 203
           + GF T++ G  +LHA +  + T
Sbjct: 341 LSGFFTIIIGIFLLHAFKNTDIT 363

Acts as a Mg(2+) transporter. Can also transport other divalent cations such as Fe(2+), Sr(2+), Ba(2+), Mn(2+), Cu(2+) and Co(2+) but to a much less extent than Mg(2+).

Pongo abelii (taxid: 9601)

>sp|Q6NVV3|NIPA3_HUMAN Magnesium transporter NIPA3 OS=Homo sapiens GN=NIPAL1 PE=2 SV=1

 Score =  162 bits (411), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 86/203 (42%), Positives = 124/203 (61%)

Query: 1   MLKERLQKMGILGCITCIVGSVVIVIHAPQEHTPNSVQEIWALATQPDFLIYVAATVSVV 60
            L E L   G +GCI  I+GS V+VIHAPQE    S+ E+      P F+ +      + 
Sbjct: 161 FLNEHLNIHGKIGCILSILGSTVMVIHAPQEEEVTSLHEMEMKLRDPGFISFAVIITVIS 220

Query: 61  LALVLHFEPRCGQTNILVYLGICSLMGSLTVVSIKAIGIAIKLTLDGISQIAYPQTWFFL 120
           L L+L   P+ GQTNILVY+ ICSL+G+ +V S+K +GIAIK  ++      +P  +  L
Sbjct: 221 LVLILIVAPKKGQTNILVYISICSLIGAFSVSSVKGLGIAIKELIEWKPVYKHPLVFVLL 280

Query: 121 TVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASE 180
            V  + V TQ+NYLNKALDTFN ++V+P+YYV FT++ +  SAI+F++W G     I   
Sbjct: 281 AVLVLSVTTQINYLNKALDTFNTSLVTPIYYVFFTSMVVTCSAILFQEWYGMTAGDIIGT 340

Query: 181 ICGFITVLSGTIILHATREHEQT 203
           + GF T++ G  +LHA +  + T
Sbjct: 341 LSGFFTIIIGIFLLHAFKNTDIT 363

Acts as a Mg(2+) transporter. Can also transport other divalent cations such as Fe(2+), Sr(2+), Ba(2+), Mn(2+), Cu(2+) and Co(2+) but to a much less extent than Mg(2+).

Homo sapiens (taxid: 9606)

>sp|Q0D2K0|NIPA4_HUMAN Magnesium transporter NIPA4 OS=Homo sapiens GN=NIPAL4 PE=1 SV=3

 Score =  157 bits (398), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 75/205 (36%), Positives = 126/205 (61%)

Query: 1   MLKERLQKMGILGCITCIVGSVVIVIHAPQEHTPNSVQEIWALATQPDFLIYVAATVSVV 60
            L+E L  +G LGC+ C+ GS V+VIHAP+E    ++ E+ +      F+++    +   
Sbjct: 211 FLRESLNLLGKLGCVICVAGSTVMVIHAPEEEKVTTIMEMASKMKDTGFIVFAVLLLVSC 270

Query: 61  LALVLHFEPRCGQTNILVYLGICSLMGSLTVVSIKAIGIAIKLTLDGISQIAYPQTWFFL 120
           L L+    PR GQ NIL+Y+ ICS++G+ +V ++K +GI IK    G+  + +P  +   
Sbjct: 271 LILIFVIAPRYGQRNILIYIIICSVIGAFSVAAVKGLGITIKNFFQGLPVVRHPLPYILS 330

Query: 121 TVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASE 180
            + A+ + TQ+N+LN+ALD FN ++V P+YYV FTT+ + +S I+FK+W       IA  
Sbjct: 331 LILALSLSTQVNFLNRALDIFNTSLVFPIYYVFFTTVVVTSSIILFKEWYSMSAVDIAGT 390

Query: 181 ICGFITVLSGTIILHATREHEQTTA 205
           + GF+T++ G  +LHA ++ + + A
Sbjct: 391 LSGFVTIILGVFMLHAFKDLDISCA 415

Acts as a Mg(2+) transporter. Can also transport other divalent cations such as Ba(2+), Mn(2+), Sr(2+) and Co(2+) but to a much less extent than Mg(2+) (By similarity). May be a receptor for ligands (trioxilins A3 and B3) from the hepoxilin pathway.

Homo sapiens (taxid: 9606)

>sp|Q8BZF2|NIPA4_MOUSE Magnesium transporter NIPA4 OS=Mus musculus GN=Nipal4 PE=1 SV=1

 Score =  155 bits (393), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 71/200 (35%), Positives = 121/200 (60%)

Query: 2   LKERLQKMGILGCITCIVGSVVIVIHAPQEHTPNSVQEIWALATQPDFLIYVAATVSVVL 61
           L E L  +G LGC+ C+ GS V+VIHAP+E    +V E+ +      F+++    V   L
Sbjct: 152 LGESLNLLGKLGCVICMAGSTVMVIHAPKEEKVTTVAEMASKMKDTGFIVFAVLLVVSCL 211

Query: 62  ALVLHFEPRCGQTNILVYLGICSLMGSLTVVSIKAIGIAIKLTLDGISQIAYPQTWFFLT 121
            L+    PR GQ NIL+Y+ ICS++GS +V ++K +G+ I+    G+  + +P  +    
Sbjct: 212 ILIFIVAPRYGQRNILIYIIICSVIGSFSVTAVKGLGVTIRNFFQGLPVVRHPLPYILSL 271

Query: 122 VAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEI 181
           +  + ++ Q+N+LN+ALD FN ++V P+YYV FTT+ + +S ++FK+W       I   +
Sbjct: 272 ILGLSIIIQVNFLNRALDIFNTSLVFPIYYVFFTTVVVASSIVLFKEWYTMSAVDIVGTL 331

Query: 182 CGFITVLSGTIILHATREHE 201
            GF+T++ G  +LHA ++ +
Sbjct: 332 SGFVTIILGVFMLHAFKDLD 351

Acts as a Mg(2+) transporter. Can also transport other divalent cations such as Ba(2+), Mn(2+), Sr(2+) and Co(2+) but to a much less extent than Mg(2+). May be a receptor for ligands (trioxilins A3 and B3) from the hepoxilin pathway.

Mus musculus (taxid: 10090)

>sp|Q7RTP0|NIPA1_HUMAN Magnesium transporter NIPA1 OS=Homo sapiens GN=NIPA1 PE=1 SV=1

 Score =  133 bits (334), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 76/203 (37%), Positives = 119/203 (58%), Gaps = 2/203 (0%)

Query: 1   MLKERLQKMGILGCITCIVGSVVIVIHAPQEHTPNSVQEIWALATQPDFLIYVAATVSVV 60
           +LKE+L  +G LGC+    GSVV++IH+P+  +  +  E+    T P F+ Y+   + ++
Sbjct: 113 LLKEKLNILGKLGCLLSCAGSVVLIIHSPKSESVTTQAELEEKLTNPVFVGYLCIVLLML 172

Query: 61  LALVLHFEPRCGQTNILVYLGICSLMGSLTVVSIKAIGIAIKLTL--DGISQIAYPQTWF 118
           L L+    P  G TNI+VY+ ICSL+GS TV S K IG+A +  L  +  SQ A      
Sbjct: 173 LLLIFWIAPAHGPTNIMVYISICSLLGSFTVPSTKGIGLAAQDILHNNPSSQRALCLCLV 232

Query: 119 FLTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIA 178
            L V    ++ Q  Y+NKAL+ F++++   +YYV+FTTL ++ASAI+F++WS   +    
Sbjct: 233 LLAVLGCSIIVQFRYINKALECFDSSVFGAIYYVVFTTLVLLASAILFREWSNVGLVDFL 292

Query: 179 SEICGFITVLSGTIILHATREHE 201
              CGF TV  G +++   +E  
Sbjct: 293 GMACGFTTVSVGIVLIQVFKEFN 315

Acts as a Mg(2+) transporter. Can also transport other divalent cations such as Fe(2+), Sr(2+), Ba(2+), Mn(2+) and Co(2+) but to a much less extent than Mg(2+).

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	238
225427938	334	PREDICTED: magnesium transporter NIPA2 [	0.995	0.709	0.861	1e-117
356544720	337	PREDICTED: magnesium transporter NIPA2-l	0.983	0.694	0.812	1e-108
388504420	334	unknown [Medicago truncatula]	0.978	0.697	0.794	1e-106
449454187	333	PREDICTED: magnesium transporter NIPA2-l	0.978	0.699	0.774	1e-104
297824951	328	hypothetical protein ARALYDRAFT_480961 [	0.974	0.707	0.748	1e-101
4803931	323	unknown protein [Arabidopsis thaliana]	0.974	0.718	0.744	1e-101
30681265	328	uncharacterized protein [Arabidopsis tha	0.974	0.707	0.744	1e-100
255574704	320	Non-imprinted in Prader-Willi/Angelman s	0.844	0.628	0.840	1e-97
297801948	326	hypothetical protein ARALYDRAFT_490637 [	0.966	0.705	0.710	2e-93
42567518	326	uncharacterized protein [Arabidopsis tha	0.966	0.705	0.702	4e-92

>gi|225427938|ref|XP_002277315.1| PREDICTED: magnesium transporter NIPA2 [Vitis vinifera] gi|297744652|emb|CBI37914.3| unnamed protein product [Vitis vinifera]

 Score =  428 bits (1100), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 205/238 (86%), Positives = 224/238 (94%), Gaps = 1/238 (0%)

Query: 1   MLKERLQKMGILGCITCIVGSVVIVIHAPQEHTPNSVQEIWALATQPDFLIYVAATVSVV 60
           MLKERLQKMG+LGC++CIVGSVVIVIHAPQEHTPNSVQEIWALATQP FLIYVAAT+S V
Sbjct: 98  MLKERLQKMGVLGCVSCIVGSVVIVIHAPQEHTPNSVQEIWALATQPAFLIYVAATLSAV 157

Query: 61  LALVLHFEPRCGQTNILVYLGICSLMGSLTVVSIKAIGIAIKLTLDGISQIAYPQTWFFL 120
           LAL+L+FEPR GQTNILVYLGICSLMGSLTVVSIKAIGIAIKLTL+GISQ+AYPQTWFFL
Sbjct: 158 LALILYFEPRYGQTNILVYLGICSLMGSLTVVSIKAIGIAIKLTLEGISQVAYPQTWFFL 217

Query: 121 TVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASE 180
           TVAAVCV+TQLNYLNKALDTFNAAIVSP+YYVMFTTLTI ASAIMFKDWSGQ+ S IASE
Sbjct: 218 TVAAVCVITQLNYLNKALDTFNAAIVSPIYYVMFTTLTISASAIMFKDWSGQNASSIASE 277

Query: 181 ICGFITVLSGTIILHATREHEQTTAPVGTVTWYVSGDSLKGAEEEHLITIHNSDYYVQ 238
           ICGFITVLSGTIILHATRE E  TA  GT+TWY+SGD++KG E+EH IT+H+SDY+ Q
Sbjct: 278 ICGFITVLSGTIILHATREQEPATAS-GTITWYLSGDAMKGVEDEHFITLHHSDYFEQ 334

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356544720|ref|XP_003540795.1| PREDICTED: magnesium transporter NIPA2-like [Glycine max]

 Score =  397 bits (1020), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 191/235 (81%), Positives = 211/235 (89%), Gaps = 1/235 (0%)

Query: 1   MLKERLQKMGILGCITCIVGSVVIVIHAPQEHTPNSVQEIWALATQPDFLIYVAATVSVV 60
           +LKERL KMG+LGC++CIVGS+VIVIHAPQE TP+SVQEIW LATQP FL YV ATVSVV
Sbjct: 101 LLKERLPKMGVLGCVSCIVGSIVIVIHAPQEQTPSSVQEIWDLATQPAFLFYVMATVSVV 160

Query: 61  LALVLHFEPRCGQTNILVYLGICSLMGSLTVVSIKAIGIAIKLTLDGISQIAYPQTWFFL 120
           LAL++HFEPR GQTN+LVYLGICSL+GSLTVVSIKAIGIAIKLTLDGISQIAYPQTWFFL
Sbjct: 161 LALIVHFEPRYGQTNMLVYLGICSLVGSLTVVSIKAIGIAIKLTLDGISQIAYPQTWFFL 220

Query: 121 TVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASE 180
           TVA +CV+TQLNYLN+ALDTFNA IVSPVYYVMFTTLTIIASAIMFKDWSGQDVS IASE
Sbjct: 221 TVATICVITQLNYLNRALDTFNATIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSSIASE 280

Query: 181 ICGFITVLSGTIILHATREHEQTTAPVGTVTWYVSGDSLKGAEEEHLITIHNSDY 235
           ICGFITVL+GTIILH TRE E++     T TW++  D +KG E EHLI IH+SDY
Sbjct: 281 ICGFITVLTGTIILHMTREQEESNMQ-KTSTWFIGEDLMKGVENEHLIRIHDSDY 334

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388504420|gb|AFK40276.1| unknown [Medicago truncatula]

 Score =  391 bits (1005), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 186/234 (79%), Positives = 214/234 (91%), Gaps = 1/234 (0%)

Query: 1   MLKERLQKMGILGCITCIVGSVVIVIHAPQEHTPNSVQEIWALATQPDFLIYVAATVSVV 60
           +LKERLQKMG+LGC++CIVGS+VIVIHAPQEHTPNSVQEIW LATQP+F+IY AATVSVV
Sbjct: 98  LLKERLQKMGVLGCLSCIVGSIVIVIHAPQEHTPNSVQEIWELATQPEFMIYAAATVSVV 157

Query: 61  LALVLHFEPRCGQTNILVYLGICSLMGSLTVVSIKAIGIAIKLTLDGISQIAYPQTWFFL 120
           LAL+L+FEPR GQ N+LVYLGICSLMGSLTV+SIKAIGIAIKLTLDGI+QIAYPQTWFF+
Sbjct: 158 LALILNFEPRYGQKNMLVYLGICSLMGSLTVMSIKAIGIAIKLTLDGINQIAYPQTWFFV 217

Query: 121 TVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASE 180
            VA++CVVTQLNYLNKALDTF+A IV+PVYYVMFTTLTI+ASAIMFKDWSGQDVS +ASE
Sbjct: 218 IVASICVVTQLNYLNKALDTFDATIVTPVYYVMFTTLTIVASAIMFKDWSGQDVSSVASE 277

Query: 181 ICGFITVLSGTIILHATREHEQTTAPVGTVTWYVSGDSLKGAEEEHLITIHNSD 234
           ICGFITVL+GTIILH T+E E+ T   GT++W++S DS K  E+EHLI I+  D
Sbjct: 278 ICGFITVLTGTIILHGTKEQEEFTRK-GTMSWFMSEDSTKCVEDEHLIVINGPD 330

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449454187|ref|XP_004144837.1| PREDICTED: magnesium transporter NIPA2-like [Cucumis sativus] gi|449510408|ref|XP_004163655.1| PREDICTED: magnesium transporter NIPA2-like [Cucumis sativus]

 Score =  382 bits (981), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 182/235 (77%), Positives = 212/235 (90%), Gaps = 2/235 (0%)

Query: 1   MLKERLQKMGILGCITCIVGSVVIVIHAPQEHTPNSVQEIWALATQPDFLIYVAATVSVV 60
           +LKERLQKMG++GC++CIVGSV+IVIHAPQEHTP+SV+EIW LATQP FL+Y+AA  S+V
Sbjct: 98  LLKERLQKMGVVGCLSCIVGSVIIVIHAPQEHTPDSVEEIWDLATQPAFLVYIAAIASLV 157

Query: 61  LALVLHFEPRCGQTNILVYLGICSLMGSLTVVSIKAIGIAIKLTLDGISQIAYPQTWFFL 120
           LAL+L+FEPR G  NILVYLGICSLMGSLTV+SIKAIGIAI+LTL+GISQ+AYPQTW F+
Sbjct: 158 LALMLYFEPRYGHVNILVYLGICSLMGSLTVMSIKAIGIAIRLTLEGISQVAYPQTWLFV 217

Query: 121 TVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASE 180
           TVA VCV+TQLNYLNKALDTFNAA+VSPVYY MFTTLTIIASAIMFKDWSGQ+ S I SE
Sbjct: 218 TVAVVCVITQLNYLNKALDTFNAALVSPVYYAMFTTLTIIASAIMFKDWSGQNASTIVSE 277

Query: 181 ICGFITVLSGTIILHATREHEQTTAPVGTVTWYVSGDSLKGAEEEHLITIHNSDY 235
           +CGF+TVLSGTIILH+TRE +Q  +  G+V WY+SGDS+K + EEHLITI NS Y
Sbjct: 278 LCGFVTVLSGTIILHSTRE-QQPVSSQGSVAWYISGDSMK-SFEEHLITISNSHY 330

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297824951|ref|XP_002880358.1| hypothetical protein ARALYDRAFT_480961 [Arabidopsis lyrata subsp. lyrata] gi|297326197|gb|EFH56617.1| hypothetical protein ARALYDRAFT_480961 [Arabidopsis lyrata subsp. lyrata]

 Score =  373 bits (957), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 176/235 (74%), Positives = 205/235 (87%), Gaps = 3/235 (1%)

Query: 1   MLKERLQKMGILGCITCIVGSVVIVIHAPQEHTPNSVQEIWALATQPDFLIYVAATVSVV 60
           +LKE+L+KMG+LGC++CIVGSVVIVIHAP+E TPNSV+EIW LATQP FLIYVA T+S+V
Sbjct: 97  LLKEKLKKMGVLGCVSCIVGSVVIVIHAPKEQTPNSVEEIWNLATQPAFLIYVAITMSIV 156

Query: 61  LALVLHFEPRCGQTNILVYLGICSLMGSLTVVSIKAIGIAIKLTLDGISQIAYPQTWFFL 120
           LAL+LHFEP CGQTNILVY+GICSLMG+LTV+SIKAIGIAIKLT++G+SQI YPQTW F+
Sbjct: 157 LALILHFEPLCGQTNILVYIGICSLMGALTVMSIKAIGIAIKLTMEGVSQIGYPQTWLFV 216

Query: 121 TVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASE 180
            VA  CVVTQL YLNKALDTFNAAIVSPVYYVMFTTLTI+ASAIMFKDWSGQD + +ASE
Sbjct: 217 MVAVTCVVTQLIYLNKALDTFNAAIVSPVYYVMFTTLTIVASAIMFKDWSGQDAASVASE 276

Query: 181 ICGFITVLSGTIILHATREHEQTTAPVGTVTWYVSGDSLKGAEEEHLITIHNSDY 235
           +CGFITVL+GT+ILH TRE EQ  A    V WY   DS K   EEHLI++++ +Y
Sbjct: 277 LCGFITVLTGTMILHGTREEEQQQASSEQVRWY---DSRKSMNEEHLISLYSPEY 328

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|4803931|gb|AAD29804.1| unknown protein [Arabidopsis thaliana]

 Score =  372 bits (955), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 175/235 (74%), Positives = 205/235 (87%), Gaps = 3/235 (1%)

Query: 1   MLKERLQKMGILGCITCIVGSVVIVIHAPQEHTPNSVQEIWALATQPDFLIYVAATVSVV 60
           +LKE+L+KMG+LGC++CIVGSVVIVIHAP+E TPNSV+EIW LATQP FLIYVA T+S+V
Sbjct: 92  LLKEKLKKMGVLGCVSCIVGSVVIVIHAPKEQTPNSVEEIWNLATQPAFLIYVAITMSIV 151

Query: 61  LALVLHFEPRCGQTNILVYLGICSLMGSLTVVSIKAIGIAIKLTLDGISQIAYPQTWFFL 120
           LAL+LHFEP CGQTNILVY+GICSLMG+LTV+SIKAIGIAIKLT++G+SQI YPQTW F+
Sbjct: 152 LALILHFEPLCGQTNILVYIGICSLMGALTVMSIKAIGIAIKLTMEGVSQIGYPQTWLFV 211

Query: 121 TVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASE 180
            VA  CVVTQL YLNKALDTFNAAIVSPVYYVMFTTLTI+ASAIMFKDWSGQD + +ASE
Sbjct: 212 MVAVTCVVTQLIYLNKALDTFNAAIVSPVYYVMFTTLTIVASAIMFKDWSGQDAASVASE 271

Query: 181 ICGFITVLSGTIILHATREHEQTTAPVGTVTWYVSGDSLKGAEEEHLITIHNSDY 235
           +CGFITVL+GT+ILH TRE EQ  A    V WY   DS K   EEHL+++++ +Y
Sbjct: 272 LCGFITVLTGTMILHGTREEEQQQASSEHVRWY---DSRKSMNEEHLVSLYSPEY 323

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|30681265|ref|NP_179708.2| uncharacterized protein [Arabidopsis thaliana] gi|26452186|dbj|BAC43181.1| unknown protein [Arabidopsis thaliana] gi|109946593|gb|ABG48475.1| At2g21120 [Arabidopsis thaliana] gi|330252031|gb|AEC07125.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  371 bits (953), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 175/235 (74%), Positives = 205/235 (87%), Gaps = 3/235 (1%)

Query: 1   MLKERLQKMGILGCITCIVGSVVIVIHAPQEHTPNSVQEIWALATQPDFLIYVAATVSVV 60
           +LKE+L+KMG+LGC++CIVGSVVIVIHAP+E TPNSV+EIW LATQP FLIYVA T+S+V
Sbjct: 97  LLKEKLKKMGVLGCVSCIVGSVVIVIHAPKEQTPNSVEEIWNLATQPAFLIYVAITMSIV 156

Query: 61  LALVLHFEPRCGQTNILVYLGICSLMGSLTVVSIKAIGIAIKLTLDGISQIAYPQTWFFL 120
           LAL+LHFEP CGQTNILVY+GICSLMG+LTV+SIKAIGIAIKLT++G+SQI YPQTW F+
Sbjct: 157 LALILHFEPLCGQTNILVYIGICSLMGALTVMSIKAIGIAIKLTMEGVSQIGYPQTWLFV 216

Query: 121 TVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASE 180
            VA  CVVTQL YLNKALDTFNAAIVSPVYYVMFTTLTI+ASAIMFKDWSGQD + +ASE
Sbjct: 217 MVAVTCVVTQLIYLNKALDTFNAAIVSPVYYVMFTTLTIVASAIMFKDWSGQDAASVASE 276

Query: 181 ICGFITVLSGTIILHATREHEQTTAPVGTVTWYVSGDSLKGAEEEHLITIHNSDY 235
           +CGFITVL+GT+ILH TRE EQ  A    V WY   DS K   EEHL+++++ +Y
Sbjct: 277 LCGFITVLTGTMILHGTREEEQQQASSEHVRWY---DSRKSMNEEHLVSLYSPEY 328

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255574704|ref|XP_002528260.1| Non-imprinted in Prader-Willi/Angelman syndrome region protein, putative [Ricinus communis] gi|223532297|gb|EEF34098.1| Non-imprinted in Prader-Willi/Angelman syndrome region protein, putative [Ricinus communis]

 Score =  361 bits (927), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 169/201 (84%), Positives = 190/201 (94%)

Query: 1   MLKERLQKMGILGCITCIVGSVVIVIHAPQEHTPNSVQEIWALATQPDFLIYVAATVSVV 60
           ML+ERLQKMG++GC++CIVGSVVIVIHAP+EHTP+SVQE+W LATQP FLIYVAA++S+V
Sbjct: 98  MLRERLQKMGVVGCVSCIVGSVVIVIHAPEEHTPSSVQEVWTLATQPAFLIYVAASLSMV 157

Query: 61  LALVLHFEPRCGQTNILVYLGICSLMGSLTVVSIKAIGIAIKLTLDGISQIAYPQTWFFL 120
           L L+LHFEPRCGQTN+LVYLGICSL+GS+TVVSIKAIGIAIKLTL+G SQIAYPQTWFFL
Sbjct: 158 LVLILHFEPRCGQTNMLVYLGICSLIGSITVVSIKAIGIAIKLTLEGTSQIAYPQTWFFL 217

Query: 121 TVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASE 180
           TVA +CV+TQLNYLN+ALDTFNA IVSPVYYVMFTTLTI+ASAIMFKDWSGQ+ S I SE
Sbjct: 218 TVAVICVITQLNYLNRALDTFNATIVSPVYYVMFTTLTIVASAIMFKDWSGQNASSITSE 277

Query: 181 ICGFITVLSGTIILHATREHE 201
           ICGFITVLSGTIILHATR  E
Sbjct: 278 ICGFITVLSGTIILHATRGQE 298

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297801948|ref|XP_002868858.1| hypothetical protein ARALYDRAFT_490637 [Arabidopsis lyrata subsp. lyrata] gi|297314694|gb|EFH45117.1| hypothetical protein ARALYDRAFT_490637 [Arabidopsis lyrata subsp. lyrata]

 Score =  347 bits (890), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 167/235 (71%), Positives = 200/235 (85%), Gaps = 5/235 (2%)

Query: 1   MLKERLQKMGILGCITCIVGSVVIVIHAPQEHTPNSVQEIWALATQPDFLIYVAATVSVV 60
           +L E+L+KMG+ GC+ CIVGSV+IVIHAPQE TPNSV+EIW LA QP FLIYVA ++S+V
Sbjct: 97  LLDEKLRKMGVWGCVCCIVGSVMIVIHAPQEQTPNSVEEIWKLAMQPAFLIYVAISMSIV 156

Query: 61  LALVLHFEPRCGQTNILVYLGICSLMGSLTVVSIKAIGIAIKLTLDGISQIAYPQTWFFL 120
           LAL+L+ EP CGQTNILVY+GICSLMGSLTV+SIKA+GIAIKLT +GI+QI YP+TWFF 
Sbjct: 157 LALILYCEPLCGQTNILVYIGICSLMGSLTVMSIKAVGIAIKLTFEGINQIWYPETWFFA 216

Query: 121 TVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASE 180
            VAA+CVV Q+ YLNKALDTFNAAIVSP+YYVMFTTLTI+ASAIMFKDW+GQ+   IASE
Sbjct: 217 IVAAICVVMQMIYLNKALDTFNAAIVSPIYYVMFTTLTIVASAIMFKDWNGQNTDSIASE 276

Query: 181 ICGFITVLSGTIILHATREHEQTTAPVGTVTWYVSGDSLKGAEEEHLITIHNSDY 235
           ICGFITVL+GT+ILHATRE EQ  A  G + W  SG S    +EEHL ++++ +Y
Sbjct: 277 ICGFITVLTGTVILHATREEEQ--ASPGRMRWQDSGKSF---DEEHLTSLYSPEY 326

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|42567518|ref|NP_195584.2| uncharacterized protein [Arabidopsis thaliana] gi|26449939|dbj|BAC42090.1| unknown protein [Arabidopsis thaliana] gi|28827654|gb|AAO50671.1| unknown protein [Arabidopsis thaliana] gi|332661569|gb|AEE86969.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  343 bits (880), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 165/235 (70%), Positives = 199/235 (84%), Gaps = 5/235 (2%)

Query: 1   MLKERLQKMGILGCITCIVGSVVIVIHAPQEHTPNSVQEIWALATQPDFLIYVAATVSVV 60
           +L E+L+KMG+ GC+ CIVGSV+IVIHAPQE TPNSV+EIW LA QP FLIYVA ++S+V
Sbjct: 97  LLDEKLRKMGVWGCVCCIVGSVMIVIHAPQEQTPNSVEEIWKLAMQPAFLIYVAISMSIV 156

Query: 61  LALVLHFEPRCGQTNILVYLGICSLMGSLTVVSIKAIGIAIKLTLDGISQIAYPQTWFFL 120
           LAL+L+ EP CGQTNILVY+GICSLMGSLTV+SIKA+GIAIKLT +GI+QI YP+TWFF 
Sbjct: 157 LALILYCEPLCGQTNILVYIGICSLMGSLTVMSIKAVGIAIKLTFEGINQIWYPETWFFA 216

Query: 121 TVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASE 180
            VAA+CVV Q+ YLNKALDTFNAAIVSP+YYVMFTTLTI+ASAIMFKDW+GQ+   IASE
Sbjct: 217 MVAAICVVMQMIYLNKALDTFNAAIVSPIYYVMFTTLTIVASAIMFKDWNGQNTDSIASE 276

Query: 181 ICGFITVLSGTIILHATREHEQTTAPVGTVTWYVSGDSLKGAEEEHLITIHNSDY 235
           ICGFITVL+GT+ILH+TRE EQ  A    + W  SG S    +EEHL ++++ +Y
Sbjct: 277 ICGFITVLTGTVILHSTREEEQ--ASPRRMRWQDSGKSF---DEEHLTSLYSPEY 326

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	238
TAIR|locus:2047112	328	AT2G21120 [Arabidopsis thalian	0.974	0.707	0.706	8.6e-88
TAIR|locus:2141742	326	AT4G38730 "AT4G38730" [Arabido	0.966	0.705	0.668	5.2e-81
TAIR|locus:2009343	368	AT1G34470 "AT1G34470" [Arabido	0.882	0.570	0.528	1.2e-63
TAIR|locus:2016084	343	AT1G71900 "AT1G71900" [Arabido	0.836	0.580	0.592	1.2e-63
TAIR|locus:2076186	335	AT3G23870 "AT3G23870" [Arabido	0.886	0.629	0.549	1.1e-62
TAIR|locus:2136912	386	AT4G09640 "AT4G09640" [Arabido	0.836	0.515	0.567	1e-61
TAIR|locus:2119540	336	AT4G13800 [Arabidopsis thalian	0.886	0.627	0.526	5.5e-61
CGD|CAL0004327	368	orf19.5352 [Candida albicans (	0.827	0.535	0.456	9.1e-45
UNIPROTKB|Q5A5P7	368	CaO19.12812 "Putative uncharac	0.827	0.535	0.456	9.1e-45
UNIPROTKB|F1NMK8	352	NIPAL4 "Uncharacterized protei	0.836	0.565	0.417	5.2e-42

TAIR|locus:2047112 AT2G21120 [Arabidopsis thaliana (taxid:3702)]

 Score = 877 (313.8 bits), Expect = 8.6e-88, P = 8.6e-88
 Identities = 166/235 (70%), Positives = 193/235 (82%)

Query:     1 MLKERLQKMGILGCITCIVGSVVIVIHAPQEHTPNSVQEIWALATQPDFLIYXXXXXXXX 60
             +LKE+L+KMG+LGC++CIVGSVVIVIHAP+E TPNSV+EIW LATQP FLIY        
Sbjct:    97 LLKEKLKKMGVLGCVSCIVGSVVIVIHAPKEQTPNSVEEIWNLATQPAFLIYVAITMSIV 156

Query:    61 XXXXXHFEPRCGQTNILVYLGICSLMGSLTVVSIKAIGIAIKLTLDGISQIAYPQTWFFL 120
                  HFEP CGQTNILVY+GICSLMG+LTV+SIKAIGIAIKLT++G+SQI YPQTW F+
Sbjct:   157 LALILHFEPLCGQTNILVYIGICSLMGALTVMSIKAIGIAIKLTMEGVSQIGYPQTWLFV 216

Query:   121 TVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASE 180
              VA  CVVTQL YLNKALDTFNAAIVSPVYYVMFTTLTI+ASAIMFKDWSGQD + +ASE
Sbjct:   217 MVAVTCVVTQLIYLNKALDTFNAAIVSPVYYVMFTTLTIVASAIMFKDWSGQDAASVASE 276

Query:   181 ICGFITVLSGTIILHATREHEQTTAPVGTVTWYVSGDSLKGAEEEHLITIHNSDY 235
             +CGFITVL+GT+ILH TRE EQ  A    V WY   DS K   EEHL+++++ +Y
Sbjct:   277 LCGFITVLTGTMILHGTREEEQQQASSEHVRWY---DSRKSMNEEHLVSLYSPEY 328

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0009625 "response to insect" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

TAIR|locus:2141742 AT4G38730 "AT4G38730" [Arabidopsis thaliana (taxid:3702)]

 Score = 813 (291.2 bits), Expect = 5.2e-81, P = 5.2e-81
 Identities = 157/235 (66%), Positives = 188/235 (80%)

Query:     1 MLKERLQKMGILGCITCIVGSVVIVIHAPQEHTPNSVQEIWALATQPDFLIYXXXXXXXX 60
             +L E+L+KMG+ GC+ CIVGSV+IVIHAPQE TPNSV+EIW LA QP FLIY        
Sbjct:    97 LLDEKLRKMGVWGCVCCIVGSVMIVIHAPQEQTPNSVEEIWKLAMQPAFLIYVAISMSIV 156

Query:    61 XXXXXHFEPRCGQTNILVYLGICSLMGSLTVVSIKAIGIAIKLTLDGISQIAYPQTWFFL 120
                  + EP CGQTNILVY+GICSLMGSLTV+SIKA+GIAIKLT +GI+QI YP+TWFF 
Sbjct:   157 LALILYCEPLCGQTNILVYIGICSLMGSLTVMSIKAVGIAIKLTFEGINQIWYPETWFFA 216

Query:   121 TVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASE 180
              VAA+CVV Q+ YLNKALDTFNAAIVSP+YYVMFTTLTI+ASAIMFKDW+GQ+   IASE
Sbjct:   217 MVAAICVVMQMIYLNKALDTFNAAIVSPIYYVMFTTLTIVASAIMFKDWNGQNTDSIASE 276

Query:   181 ICGFITVLSGTIILHATREHEQTTAPVGTVTWYVSGDSLKGAEEEHLITIHNSDY 235
             ICGFITVL+GT+ILH+TRE EQ + P   + W  SG S    +EEHL ++++ +Y
Sbjct:   277 ICGFITVLTGTVILHSTREEEQAS-P-RRMRWQDSGKSF---DEEHLTSLYSPEY 326

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

TAIR|locus:2009343 AT1G34470 "AT1G34470" [Arabidopsis thaliana (taxid:3702)]

 Score = 649 (233.5 bits), Expect = 1.2e-63, P = 1.2e-63
 Identities = 111/210 (52%), Positives = 158/210 (75%)

Query:     1 MLKERLQKMGILGCITCIVGSVVIVIHAPQEHTPNSVQEIWALATQPDFLIYXXXXXXXX 60
             +L E+L   G+LGC+ C+VGS+ IV+HAPQE   +SV ++W LAT+P FL+Y        
Sbjct:   111 ILHEKLHTFGLLGCVLCVVGSITIVLHAPQEQEIDSVLQVWNLATEPAFLLYAAAVVGAA 170

Query:    61 XXXXXHFEPRCGQTNILVYLGICSLMGSLTVVSIKAIGIAIKLTLDGISQIAYPQTWFFL 120
                   F P+ GQ++++VY+G+CSL+GSL+V+S+KA+GIA+KLT  G++Q+ YPQTW F 
Sbjct:   171 IILIVQFVPQYGQSHVMVYIGVCSLVGSLSVMSVKALGIALKLTFSGMNQLIYPQTWVFT 230

Query:   121 TVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASE 180
              +   CV+TQ+NYLNKALDTFN A+VSP+YYVMFT+LTI+AS IMFKDW  QD + I +E
Sbjct:   231 LIVLTCVITQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQDGTQIVTE 290

Query:   181 ICGFITVLSGTIILHATREHEQTTAPVGTV 210
             +CGF+T+LSGT +LH T++    ++ +G +
Sbjct:   291 LCGFVTILSGTFLLHKTKDMVDGSSSLGNL 320

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2016084 AT1G71900 "AT1G71900" [Arabidopsis thaliana (taxid:3702)]

 Score = 649 (233.5 bits), Expect = 1.2e-63, P = 1.2e-63
 Identities = 118/199 (59%), Positives = 150/199 (75%)

Query:     1 MLKERLQKMGILGCITCIVGSVVIVIHAPQEHTPNSVQEIWALATQPDFLIYXXXXXXXX 60
             +L+E+L   GILGC  C+VGS  IV+HAPQE   +SV E+W LAT+P F+ Y        
Sbjct:   111 ILREKLHIFGILGCALCVVGSTTIVLHAPQEREIDSVIEVWNLATEPAFMFYASLVIGAA 170

Query:    61 XXXXXHFEPRCGQTNILVYLGICSLMGSLTVVSIKAIGIAIKLTLDGISQIAYPQTWFFL 120
                   F P+ GQTN++VY+GICSL+GSL+V+S+KA+GIA+KLT  G +Q+ YPQTW F 
Sbjct:   171 VFLIIRFVPQYGQTNVMVYIGICSLVGSLSVMSVKALGIALKLTFSGTNQLFYPQTWIFT 230

Query:   121 TVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASE 180
              V   CVVTQLNYLNKALDTFN AIVSP+YYVMFT+LTI+AS IMFKDW  Q+ + I +E
Sbjct:   231 LVVLTCVVTQLNYLNKALDTFNTAIVSPIYYVMFTSLTILASVIMFKDWDRQNGTQIVTE 290

Query:   181 ICGFITVLSGTIILHATRE 199
             ICGF+T+LSGT +LH T++
Sbjct:   291 ICGFVTILSGTFLLHRTKD 309

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2076186 AT3G23870 "AT3G23870" [Arabidopsis thaliana (taxid:3702)]

 Score = 640 (230.4 bits), Expect = 1.1e-62, P = 1.1e-62
 Identities = 116/211 (54%), Positives = 153/211 (72%)

Query:     1 MLKERLQKMGILGCITCIVGSVVIVIHAPQEHTPNSVQEIWALATQPDFLIYXXXXXXXX 60
             +LKE+L   GILGCI C+VGS  IV+HAP E    SV++IW LA +P FL+Y        
Sbjct:   100 ILKEKLHMFGILGCILCVVGSTTIVLHAPHEQKIESVKQIWQLAIEPGFLVYSAVIVIVV 159

Query:    61 XXXXXHFEPRCGQTNILVYLGICSLMGSLTVVSIKAIGIAIKLTLDGISQIAYPQTWFFL 120
                  ++EPR G+T+++VY+GICSLMGSLTV+S+KA+ IAIKLT  G +Q  Y  TW F+
Sbjct:   160 AILIFYYEPRYGKTHMIVYVGICSLMGSLTVMSVKAVAIAIKLTFSGTNQFKYFNTWIFI 219

Query:   121 TVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASE 180
              V A C + Q+NYLNKALDTFN A++SPVYYVMFTT TIIAS IMFKDW+ Q    IA+E
Sbjct:   220 LVVATCCILQINYLNKALDTFNTAVISPVYYVMFTTFTIIASMIMFKDWASQSGLKIATE 279

Query:   181 ICGFITVLSGTIILHATREHEQTTAPVGTVT 211
             +CGF+T+LSGT +LH T++   + +  G+++
Sbjct:   280 LCGFVTILSGTFLLHKTKDMGNSASGRGSIS 310

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0016036 "cellular response to phosphate starvation" evidence=RCA

GO:0019375 "galactolipid biosynthetic process" evidence=RCA

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=RCA

TAIR|locus:2136912 AT4G09640 "AT4G09640" [Arabidopsis thaliana (taxid:3702)]

 Score = 631 (227.2 bits), Expect = 1.0e-61, P = 1.0e-61
 Identities = 113/199 (56%), Positives = 147/199 (73%)

Query:     1 MLKERLQKMGILGCITCIVGSVVIVIHAPQEHTPNSVQEIWALATQPDFLIYXXXXXXXX 60
             +L+E+L   GILGC  CIVGSV IV+HAPQE    SV E+W LAT+P FL Y        
Sbjct:   111 ILQEKLHTFGILGCALCIVGSVTIVLHAPQEQDIVSVLEVWNLATEPAFLFYAAAVVGAA 170

Query:    61 XXXXXHFEPRCGQTNILVYLGICSLMGSLTVVSIKAIGIAIKLTLDGISQIAYPQTWFFL 120
                   F P  GQ++++VY+G+CSL+GSL+V+S+KA+GIA+KLT  G +Q+ YPQTW F 
Sbjct:   171 IVLIVQFIPLYGQSHVMVYIGVCSLIGSLSVMSVKALGIALKLTFSGTNQLGYPQTWVFT 230

Query:   121 TVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASE 180
              +   CV+TQ+NYLNKALDTFN A+VSP+YYVMFT+LTI+AS IMFKDW  Q  + I +E
Sbjct:   231 VIVLFCVITQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQSGTQIMTE 290

Query:   181 ICGFITVLSGTIILHATRE 199
             +CGF+T+LSGT +LH T +
Sbjct:   291 LCGFVTILSGTFLLHTTTD 309

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2119540 AT4G13800 [Arabidopsis thaliana (taxid:3702)]

 Score = 624 (224.7 bits), Expect = 5.5e-61, P = 5.5e-61
 Identities = 111/211 (52%), Positives = 152/211 (72%)

Query:     1 MLKERLQKMGILGCITCIVGSVVIVIHAPQEHTPNSVQEIWALATQPDFLIYXXXXXXXX 60
             +L+E+L   GILGC+ C+VGS  IV+HAP E    SV+++W LAT+P FL Y        
Sbjct:   100 ILEEKLHMFGILGCVLCVVGSTTIVLHAPHEQGIESVKQVWHLATEPGFLAYSAVVLVVV 159

Query:    61 XXXXXHFEPRCGQTNILVYLGICSLMGSLTVVSIKAIGIAIKLTLDGISQIAYPQTWFFL 120
                  ++EPR G+T+++VY+GICSLMGSLTV+S+KA+ IAIKLT  G++Q  Y   W F+
Sbjct:   160 LALIFYYEPRYGKTHMIVYVGICSLMGSLTVMSVKAVAIAIKLTFSGMNQFKYFHAWIFI 219

Query:   121 TVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASE 180
              V  +C + Q+NYLNKALD FN A++SPVYYVMFTT TI+AS IMFKDW+ Q    IA+E
Sbjct:   220 IVVTICCILQINYLNKALDNFNTAVISPVYYVMFTTFTILASMIMFKDWASQSGLQIATE 279

Query:   181 ICGFITVLSGTIILHATREHEQTTAPVGTVT 211
             +CGF+T+LSGT +LH T++   +T+  G+ +
Sbjct:   280 LCGFVTILSGTFLLHKTKDMGNSTSLRGSTS 310

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0008150 "biological_process" evidence=ND

CGD|CAL0004327 orf19.5352 [Candida albicans (taxid:5476)]

 Score = 471 (170.9 bits), Expect = 9.1e-45, P = 9.1e-45
 Identities = 90/197 (45%), Positives = 128/197 (64%)

Query:     2 LKERLQKMGILGCITCIVGSVVIVIHAPQEHTPNSVQEIWALATQPDFLIYXXXXXXXXX 61
             LKERL  +G +GC  C++GSV+I++HAP +    +V EI   ATQP F+ Y         
Sbjct:    98 LKERLGTLGKMGCAICLMGSVIIILHAPPDKEVQTVDEILGYATQPGFMFYCTVVTLYSL 157

Query:    62 XXXXHFEPRCGQTNILVYLGICSLMGSLTVVSIKAIGIAIKLTLDGISQIAYPQTWFFLT 121
                    P+ G TN ++YL ICS +GS++V+SIKA GIA+KLTL G +Q  +  T+ FL 
Sbjct:   158 FMIYKIVPKYGNTNPMIYLSICSSVGSISVMSIKAFGIALKLTLGGNNQFTHVSTYLFLI 217

Query:   122 VAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEI 181
             V A+C+VTQ+NY NKALD F+ +IV+P+YYV FTT T+ AS I+FK ++      I S +
Sbjct:   218 VVALCIVTQMNYFNKALDQFDTSIVNPLYYVTFTTFTLAASFILFKGFNTSSAVDIISLL 277

Query:   182 CGFITVLSGTIILHATR 198
              GF+ + SG  +L+ +R
Sbjct:   278 IGFLIIFSGVYLLNISR 294

GO:0005575 "cellular_component" evidence=ND

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|Q5A5P7 CaO19.12812 "Putative uncharacterized protein" [Candida albicans SC5314 (taxid:237561)]

 Score = 471 (170.9 bits), Expect = 9.1e-45, P = 9.1e-45
 Identities = 90/197 (45%), Positives = 128/197 (64%)

Query:     2 LKERLQKMGILGCITCIVGSVVIVIHAPQEHTPNSVQEIWALATQPDFLIYXXXXXXXXX 61
             LKERL  +G +GC  C++GSV+I++HAP +    +V EI   ATQP F+ Y         
Sbjct:    98 LKERLGTLGKMGCAICLMGSVIIILHAPPDKEVQTVDEILGYATQPGFMFYCTVVTLYSL 157

Query:    62 XXXXHFEPRCGQTNILVYLGICSLMGSLTVVSIKAIGIAIKLTLDGISQIAYPQTWFFLT 121
                    P+ G TN ++YL ICS +GS++V+SIKA GIA+KLTL G +Q  +  T+ FL 
Sbjct:   158 FMIYKIVPKYGNTNPMIYLSICSSVGSISVMSIKAFGIALKLTLGGNNQFTHVSTYLFLI 217

Query:   122 VAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEI 181
             V A+C+VTQ+NY NKALD F+ +IV+P+YYV FTT T+ AS I+FK ++      I S +
Sbjct:   218 VVALCIVTQMNYFNKALDQFDTSIVNPLYYVTFTTFTLAASFILFKGFNTSSAVDIISLL 277

Query:   182 CGFITVLSGTIILHATR 198
              GF+ + SG  +L+ +R
Sbjct:   278 IGFLIIFSGVYLLNISR 294

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|F1NMK8 NIPAL4 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 445 (161.7 bits), Expect = 5.2e-42, P = 5.2e-42
 Identities = 83/199 (41%), Positives = 122/199 (61%)

Query:     1 MLKERLQKMGILGCITCIVGSVVIVIHAPQEHTPNSVQEIWALATQPDFLIYXXXXXXXX 60
             +L ERL  +G LGC+  +VGS V+VIHAP+E    ++ E+     +P FL Y        
Sbjct:   105 LLGERLNLLGKLGCMLSLVGSTVMVIHAPEEEEVTTLDEMLFKLKEPGFLAYAVVLLAIC 164

Query:    61 XXXXXHFEPRCGQTNILVYLGICSLMGSLTVVSIKAIGIAIKLTLDGISQIAYPQTWFFL 120
                  +  PR G++NIL+YL ICS++G+ +V S+K +GIAIK    G   + +P TW  +
Sbjct:   165 FLLILYLAPRYGRSNILIYLTICSVIGAFSVSSVKGLGIAIKGFFAGQPVLQHPLTWILV 224

Query:   121 TVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASE 180
                   + TQ+NYLNKALD FN ++V P+YYV+FTT+ I  S I+FK+W    V  I   
Sbjct:   225 ITLVASITTQINYLNKALDIFNTSLVFPIYYVLFTTIVITTSIILFKEWVAMTVVDIIGT 284

Query:   181 ICGFITVLSGTIILHATRE 199
             +CGF+T++ G  +LHA ++
Sbjct:   285 VCGFLTIILGVFLLHAFKD 303

GO:0015095 "magnesium ion transmembrane transporter activity" evidence=IEA

GO:0016020 "membrane" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: fgenesh2_kg.4__21__AT2G21120.1 annotation not avaliable (328 aa) (Arabidopsis lyrata)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	238
pfam05653	300	pfam05653, Mg_trans_NIPA, Magnesium transporter NI	3e-97

>gnl|CDD|114381 pfam05653, Mg_trans_NIPA, Magnesium transporter NIPA

 Score =  285 bits (732), Expect = 3e-97
 Identities = 127/203 (62%), Positives = 151/203 (74%)

Query: 2   LKERLQKMGILGCITCIVGSVVIVIHAPQEHTPNSVQEIWALATQPDFLIYVAATVSVVL 61
           L E+L   G LGC+ CIVGS VIVIHAP+E    SV+E+W LAT P FL+YV   V VVL
Sbjct: 98  LNEKLNLFGKLGCVLCIVGSTVIVIHAPKEQEIESVREVWNLATDPGFLVYVILVVGVVL 157

Query: 62  ALVLHFEPRCGQTNILVYLGICSLMGSLTVVSIKAIGIAIKLTLDGISQIAYPQTWFFLT 121
            L+   EPR GQTNILVY+ ICSL+GSLTV+S+KA+GIAIKLT  G +Q+ YPQ W FL 
Sbjct: 158 ILIFFVEPRHGQTNILVYITICSLIGSLTVMSVKALGIAIKLTFSGKNQLGYPQFWIFLV 217

Query: 122 VAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEI 181
           V   CVVTQ+NYLNKALD FN +IV+PVYYV FTT  I ASAI+FK+W GQ    IA E+
Sbjct: 218 VVVTCVVTQINYLNKALDIFNTSIVTPVYYVFFTTSVIAASAILFKEWLGQSFDDIAGEL 277

Query: 182 CGFITVLSGTIILHATREHEQTT 204
           CGF T+L GT +LHATR+ E + 
Sbjct: 278 CGFFTILLGTFLLHATRDIEFSQ 300

NIPA (nonimprinted in Prader-Willi/Angelman syndrome) is a family of integral membrane proteins which function as magnesium transporters. Length = 300

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	238
KOG2922	335	consensus Uncharacterized conserved protein [Funct	100.0
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	100.0
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	96.4
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	96.37
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	96.34
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	96.32
PRK11689	295	aromatic amino acid exporter; Provisional	95.92
PLN00411	358	nodulin MtN21 family protein; Provisional	95.53
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	95.21
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	94.32
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	94.25
COG2510	140	Predicted membrane protein [Function unknown]	93.88
PRK09541	110	emrE multidrug efflux protein; Reviewed	93.38
PRK11272	292	putative DMT superfamily transporter inner membran	93.24
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	92.6
PRK11431	105	multidrug efflux system protein; Provisional	92.49
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	92.26
PRK15430	296	putative chloramphenical resistance permease RarD;	92.25
COG0697	292	RhaT Permeases of the drug/metabolite transporter	91.82
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	91.62
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	91.27
PRK10650	109	multidrug efflux system protein MdtI; Provisional	91.27
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	90.99
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	89.38
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	89.15
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	87.89
KOG4510	346	consensus Permease of the drug/metabolite transpor	86.68
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	84.3
PF13536	113	EmrE: Multidrug resistance efflux transporter	81.36

>KOG2922 consensus Uncharacterized conserved protein [Function unknown]

Probab=100.00  E-value=2.6e-59  Score=420.51  Aligned_cols=206  Identities=61%  Similarity=1.087  Sum_probs=202.4

Q ss_pred             CCCccccccceeeeEeeeeceeEEEEecCCCCCCCCHHHHHHHhcChhhHHHHHHHHHHHHHHhhhhccccCccceeEEE
Q 026475            1 MLKERLQKMGILGCITCIVGSVVIVIHAPQEHTPNSVQEIWALATQPDFLIYVAATVSVVLALVLHFEPRCGQTNILVYL   80 (238)
Q Consensus         1 ~L~E~l~~~~~vG~~lii~G~~liV~~a~~~~~~~t~~eL~~~~~~~~Fl~Y~~~~~~~~~~Li~~~~p~~g~~~~~vy~   80 (238)
                      +||||++..|++||++|++|++++|+|+||+++..|++|+++++++|+|++|+.+++++++++++++.||+|++|+++|+
T Consensus       111 ~L~Ekl~~~g~lGc~l~v~Gst~iV~haP~e~~i~t~~el~~~~~~~~Fliy~~~iil~~~il~~~~~p~~g~tnilvyi  190 (335)
T KOG2922|consen  111 FLKEKLNLLGILGCVLCVVGSTTIVIHAPKEQEIESVEEVWELATEPGFLVYVIIIILIVLILIFFYAPRYGQTNILVYI  190 (335)
T ss_pred             HHHHHHHHhhhhheeEEecccEEEEEecCcccccccHHHHHHHhcCccHHHHHHHHHHHHHHHheeecccccccceeehh
Confidence            58999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEeccccccchhhhHHHHHHHHHHhcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhccccceeecchhhhhHHHHHHh
Q 026475           81 GICSLMGSLTVVSIKAIGIAIKLTLDGISQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTII  160 (238)
Q Consensus        81 ~i~~l~gs~tvl~aK~l~~~l~~t~~g~~qf~~~~ty~~l~~lv~tai~Ql~~LNkAL~~fda~~VvPv~~v~ft~~~ii  160 (238)
                      ++|+++||+||+++|+++.+++++++|+||+.+|.||+++++++.|+++|++|||||||+|||++|.|+||++||+.+|+
T Consensus       191 ~i~s~iGS~tV~svKalg~aiklt~~g~~ql~~~~ty~~~l~~~~~~~~Q~~yLNkAL~~fntslV~PiyyV~fTtl~I~  270 (335)
T KOG2922|consen  191 GICSLIGSLTVMSVKALGIAIKLTFSGNNQLFYPLTWIFLLVVATCVSTQMNYLNKALDLFNTSIVSPIYYVMFTTLVIL  270 (335)
T ss_pred             hHhhhhcceeeeeHHHHHHHHHHHhcCCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhhhcccCCCChhhHHHHHHHHHHHhheeeeeccccCCCCCCCC
Q 026475          161 ASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHATREHEQTTAP  206 (238)
Q Consensus       161 ~g~I~f~e~~~~~~~~~~~f~~G~~ii~~GV~lLs~~~~~~~~~~~  206 (238)
                      +|+|+||||++++..|+.+++|||++++.|+++|+++||.+....+
T Consensus       271 as~I~Fkew~~~~~~~i~~~~~Gf~ti~~G~flL~~~kd~~~~~~s  316 (335)
T KOG2922|consen  271 ASAILFKEWSGQDALDIAGELCGFVTIFLGIFLLHRTKDMEISLAS  316 (335)
T ss_pred             HHHHHHHHhcCCcHHHHHHHHHhHHHhhheeeEeeeeccccccccc
Confidence            9999999999999999999999999999999999999999976654

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=100.00  E-value=2.3e-53  Score=385.39  Aligned_cols=203  Identities=44%  Similarity=0.793  Sum_probs=198.7

Q ss_pred             CCCccccccceeeeEeeeeceeEEEEecCCCCCCCCHHHHHHHhcChhhHHHHHHHHHHHHHHhhhhccccCccceeEEE
Q 026475            1 MLKERLQKMGILGCITCIVGSVVIVIHAPQEHTPNSVQEIWALATQPDFLIYVAATVSVVLALVLHFEPRCGQTNILVYL   80 (238)
Q Consensus         1 ~L~E~l~~~~~vG~~lii~G~~liV~~a~~~~~~~t~~eL~~~~~~~~Fl~Y~~~~~~~~~~Li~~~~p~~g~~~~~vy~   80 (238)
                      +||||++++|++||++|++|++++++|+|++++.+|++|+.+++++|+|+.|+++..+..+.++++..||+|++|+++|.
T Consensus        97 ~l~e~~~~~~~~G~~l~i~G~~liv~~~~~~~~~~t~~~l~~~~~~~~fl~y~~~~~~~~~~L~~~~~~r~g~~~i~vyi  176 (300)
T PF05653_consen   97 FLGEKLTRRDIVGCALIILGSVLIVIFAPKEEPIHTLDELIALLSQPGFLVYFILVLVLILILIFFIKPRYGRRNILVYI  176 (300)
T ss_pred             HhcccchHhHHhhHHHHHhhheeeEEeCCCCCCcCCHHHHHHHhcCcceehhHHHHHHHHHHHHHhhcchhcccceEEEE
Confidence            58999999999999999999999999999999999999999999999999999999998888888999999999999999


Q ss_pred             EEeccccccchhhhHHHHHHHHHHhcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhccccceeecchhhhhHHHHHHh
Q 026475           81 GICSLMGSLTVVSIKAIGIAIKLTLDGISQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTII  160 (238)
Q Consensus        81 ~i~~l~gs~tvl~aK~l~~~l~~t~~g~~qf~~~~ty~~l~~lv~tai~Ql~~LNkAL~~fda~~VvPv~~v~ft~~~ii  160 (238)
                      ++||++||+||+++|+++++++++++|+|||.+|.+|++++++++|+++|++||||||++||+++|+|+||++||+++++
T Consensus       177 ~i~sl~Gs~tvl~~K~i~~~i~~~~~g~~~f~~~~~y~l~~~~v~~~~~Q~~~LN~aL~~fd~~~V~P~~~v~~t~~~i~  256 (300)
T PF05653_consen  177 SICSLIGSFTVLSAKAISILIKLTFSGDNQFTYPLTYLLLLVLVVTAVLQLYYLNKALKRFDTSLVVPVYYVFFTLSSII  256 (300)
T ss_pred             EEeccccchhhhHHHHHHHHHHHHhcCchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhccceEEEeehhHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhhhcccCCCChhhHHHHHHHHHHHhheeeeeccccCCCCC
Q 026475          161 ASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHATREHEQT  203 (238)
Q Consensus       161 ~g~I~f~e~~~~~~~~~~~f~~G~~ii~~GV~lLs~~~~~~~~  203 (238)
                      +|+|+||||++++++|++++++|++++++||++|+.+||+++.
T Consensus       257 ~g~i~f~e~~~~~~~~~~~~~~G~~~ii~GV~lL~~~~~~~~~  299 (300)
T PF05653_consen  257 GGAIFFQEFSRMTAWQIIGFLCGFLIIIIGVFLLSSSKDKEIS  299 (300)
T ss_pred             HHHHHhcccccccHHHHHHHHHHHHHHHHhhheeeccCchhcc
Confidence            9999999999999999999999999999999999999998864

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=96.40  E-value=0.00097  Score=60.07  Aligned_cols=72  Identities=13%  Similarity=0.213  Sum_probs=50.7

Q ss_pred             HHHHHHHHHHHHHHHHHhhccccceeecchhhhhHHHHHHhhhhhhhcccCCCChhhHHHHHHHHHHHhheeeeecccc
Q 026475          120 LTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHATR  198 (238)
Q Consensus       120 l~~lv~tai~Ql~~LNkAL~~fda~~VvPv~~v~ft~~~ii~g~I~f~e~~~~~~~~~~~f~~G~~ii~~GV~lLs~~~  198 (238)
                      +...+.+.+.+....|+++++.++..+.++.+ +-=..+++-|.++++|-  .++.+    ..|..+++.|+++....+
T Consensus       218 ~~l~i~~t~~~~~l~~~~l~~~~a~~~s~~~~-l~Pv~a~~~~~l~lgE~--~~~~~----~iG~~lI~~gv~l~~~~~  289 (299)
T PRK11453        218 MYLAFVATIVGYGIWGTLLGRYETWRVAPLSL-LVPVVGLASAALLLDER--LTGLQ----FLGAVLIMAGLYINVFGL  289 (299)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHH-HHHHHHHHHHHHHhCCC--ccHHH----HHHHHHHHHHHHHHhcch
Confidence            33335556666777899999999988887655 44567778888888883  44544    567778888988765433

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=96.37  E-value=0.004  Score=54.05  Aligned_cols=71  Identities=8%  Similarity=0.189  Sum_probs=46.6

Q ss_pred             hhHHH--HHHHHHHHHHHHHHHHHHHhhccccceeecchhhhhHHHHHHhhhhhhhcccCCCChhhHHHHHHHHHHHhhe
Q 026475          113 YPQTW--FFLTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSG  190 (238)
Q Consensus       113 ~~~ty--~~l~~lv~tai~Ql~~LNkAL~~fda~~VvPv~~v~ft~~~ii~g~I~f~e~~~~~~~~~~~f~~G~~ii~~G  190 (238)
                      .+..|  ++....+.+.+.+.-| ++|+++-+++.+.++.+ .-...+.+-+.++++|  ..++.++.    |..+++.|
T Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~-~~a~~~~~~~~~s~~~~-~~pv~~~ll~~~~~~E--~~~~~~~~----G~~li~~g  258 (260)
T TIGR00950       187 LSLQWGALLYLGLIGTALAYFLW-NKGLTLVDPSAASILAL-AEPLVALLLGLLILGE--TLSLPQLI----GGALIIAA  258 (260)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHH-HHHHhcCCchHHHHHHH-HHHHHHHHHHHHHhCC--CCCHHHHH----HHHHHHHh
Confidence            45555  3344444455665554 99999999999998888 4555666677788887  45565544    55555555


Q ss_pred             e
Q 026475          191 T  191 (238)
Q Consensus       191 V  191 (238)
                      +
T Consensus       259 ~  259 (260)
T TIGR00950       259 V  259 (260)
T ss_pred             c
Confidence            4

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=96.34  E-value=0.0057  Score=54.49  Aligned_cols=66  Identities=9%  Similarity=0.145  Sum_probs=46.7

Q ss_pred             HHHHHHHHHHHHHHHHhhccccceeecchhhhhHHHHHHhhhhhhhcccCCCChhhHHHHHHHHHHHhheeeee
Q 026475          121 TVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIIL  194 (238)
Q Consensus       121 ~~lv~tai~Ql~~LNkAL~~fda~~VvPv~~v~ft~~~ii~g~I~f~e~~~~~~~~~~~f~~G~~ii~~GV~lL  194 (238)
                      ...+.+++ -....|+|+++.+++.+.|..|.. -..+++-|.++++|-  .++.    -..|..+++.|++++
T Consensus       216 ~~~~~s~l-~~~l~~~al~~~~a~~~~~~~~l~-pv~a~l~g~~~lgE~--~~~~----~~iG~~lil~Gv~l~  281 (281)
T TIGR03340       216 LGGLMIGG-AYALVLWAMTRLPVATVVALRNTS-IVFAVVLGIWFLNER--WYLT----RLMGVCIIVAGLVVL  281 (281)
T ss_pred             HHHHHHHH-HHHHHHHHHhhCCceEEEeecccH-HHHHHHHHHHHhCCC--ccHH----HHHHHHHHHHhHHhC
Confidence            33333444 444678999999999999999875 566777788889984  3343    345666788887764

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=96.32  E-value=0.01  Score=53.56  Aligned_cols=173  Identities=10%  Similarity=0.065  Sum_probs=97.6

Q ss_pred             CCCccccccc----eeeeEeeeeceeEEEEecCCCCCCCCHHHHHHHhcChhhHHHHHHHHHHHHHHhhhhccccCccce
Q 026475            1 MLKERLQKMG----ILGCITCIVGSVVIVIHAPQEHTPNSVQEIWALATQPDFLIYVAATVSVVLALVLHFEPRCGQTNI   76 (238)
Q Consensus         1 ~L~E~l~~~~----~vG~~lii~G~~liV~~a~~~~~~~t~~eL~~~~~~~~Fl~Y~~~~~~~~~~Li~~~~p~~g~~~~   76 (238)
                      ++||+.++++    .+|.+++++|+.++..+.+++.+   .++..   ..+.=+.+..+..  +.+-.+...+|+-+   
T Consensus       107 ~f~e~~t~~~~~~~~~g~~l~l~G~~l~~~~~~~~~~---~~~~~---~~~~Gi~~~l~sg--~~y~~~~~~~~~~~---  175 (290)
T TIGR00776       107 VFGEWSTSIQTLLGLLALILIIIGVYLTSRSKDKSAG---IKSEF---NFKKGILLLLMST--IGYLVYVVVAKAFG---  175 (290)
T ss_pred             HhhhccchHHHHHHHHHHHHHHHhHheEEeccccccc---ccccc---chhhHHHHHHHHH--HHHHHHHHHHHHcC---
Confidence            3689999999    99999999998888666433221   11100   1111122222221  11211222333211   


Q ss_pred             eEEEEEeccccccchhhhHHHH----HHHHHHhcCC-CCcchhHHHHHHHHHHHHHHHHHHHHHHhhc-cccceeecchh
Q 026475           77 LVYLGICSLMGSLTVVSIKAIG----IAIKLTLDGI-SQIAYPQTWFFLTVAAVCVVTQLNYLNKALD-TFNAAIVSPVY  150 (238)
Q Consensus        77 ~vy~~i~~l~gs~tvl~aK~l~----~~l~~t~~g~-~qf~~~~ty~~l~~lv~tai~Ql~~LNkAL~-~fda~~VvPv~  150 (238)
                               .++.+..+..+.+    .++-....-+ +++.....|..++.-+.+ ..+......+++ +=+++.-.++-
T Consensus       176 ---------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~-~ia~~~y~~~~~~~~~~~~~~~ls  245 (290)
T TIGR00776       176 ---------VDGLSVLLPQAIGMVIGGIIFNLGHILAKPLKKYAILLNILPGLMW-GIGNFFYLFSAQPKVGVATSFSLS  245 (290)
T ss_pred             ---------CCcceehhHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHH-HHHHHHHHHHcccccchhhHHHHH
Confidence                     2233333333331    1111111100 222333334333322334 666666778888 56666666666


Q ss_pred             hhhHHHHHHhhhhhhhcccCCCChhhHHHHHHHHHHHhheeeeeccc
Q 026475          151 YVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHAT  197 (238)
Q Consensus       151 ~v~ft~~~ii~g~I~f~e~~~~~~~~~~~f~~G~~ii~~GV~lLs~~  197 (238)
                      +.- -..+.+.|..+++|-.  ++.|+....+|+.+++.|+.++...
T Consensus       246 ~~~-pvia~~~~v~~l~E~~--~~~~~~~~~iG~~lIi~~~~l~~~~  289 (290)
T TIGR00776       246 QLG-VIISTLGGILILGEKK--TKREMIAISVGIILIIIAANILGIG  289 (290)
T ss_pred             HHH-HHHHHHHHHHHhccCC--CcceeehhHHHHHHHHHHHHHHhcc
Confidence            666 8889999999999965  7899999999999999999987654

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>PRK11689 aromatic amino acid exporter; Provisional

Probab=95.92  E-value=0.027  Score=50.63  Aligned_cols=172  Identities=14%  Similarity=0.114  Sum_probs=86.1

Q ss_pred             CCCccccccceeeeEeeeeceeEEEEecCCCCCCCCHHHHHHHhcChhhHHHHHHHHHHHHHHhh-hhccccCccc-eeE
Q 026475            1 MLKERLQKMGILGCITCIVGSVVIVIHAPQEHTPNSVQEIWALATQPDFLIYVAATVSVVLALVL-HFEPRCGQTN-ILV   78 (238)
Q Consensus         1 ~L~E~l~~~~~vG~~lii~G~~liV~~a~~~~~~~t~~eL~~~~~~~~Fl~Y~~~~~~~~~~Li~-~~~p~~g~~~-~~v   78 (238)
                      ++|||++++..+|++++..|..++...++    ..+.+++.....+ ....+........+.-.+ ...+|+.++. +..
T Consensus       112 ~~~e~~~~~~~~g~~l~~~Gv~li~~~~~----~~~~~~~~~~~~~-~~~G~~~~l~aa~~~A~~~v~~k~~~~~~~~~~  186 (295)
T PRK11689        112 FNGQKANWLLIPGLLLALAGVAWVLGGDN----GLSLAELINNIAS-NPLSYGLAFIGAFIWAAYCNVTRKYARGKNGIT  186 (295)
T ss_pred             HhcCCccHHHHHHHHHHHHhHhheecCCc----cchhhhhhhcccc-ChHHHHHHHHHHHHHHHHHHHHhhccCCCCchh
Confidence            47999999999999999999988764321    1122221111111 111222222222222111 2233433221 211


Q ss_pred             EEEEeccccccchhhhHHHHHHHHHHhcCCCC-cchhHHHHHHHH-HHHHHHHHHHHHHHhhccccceeecchhhhhHHH
Q 026475           79 YLGICSLMGSLTVVSIKAIGIAIKLTLDGISQ-IAYPQTWFFLTV-AAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTT  156 (238)
Q Consensus        79 y~~i~~l~gs~tvl~aK~l~~~l~~t~~g~~q-f~~~~ty~~l~~-lv~tai~Ql~~LNkAL~~fda~~VvPv~~v~ft~  156 (238)
                      +   ....+        +....+-..+.+... -..+..|..++. .+.+++.+.-| |+|+++-+++.+.+..|. --.
T Consensus       187 ~---~~~~~--------~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~t~~~~~l~-~~al~~~~a~~~s~~~~l-~Pv  253 (295)
T PRK11689        187 L---FFILT--------ALALWIKYFLSPQPAMVFSLPAIIKLLLAAAAMGFGYAAW-NVGILHGNMTLLATASYF-TPV  253 (295)
T ss_pred             H---HHHHH--------HHHHHHHHHHhcCccccCCHHHHHHHHHHHHHHHHHHHHH-HHHHHccCHHHHHHHHHh-HHH
Confidence            1   00001        111111112222221 123334432222 23455555555 999999999977776664 345


Q ss_pred             HHHhhhhhhhcccCCCChhhHHHHHHHHHHHhheeeeecc
Q 026475          157 LTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHA  196 (238)
Q Consensus       157 ~~ii~g~I~f~e~~~~~~~~~~~f~~G~~ii~~GV~lLs~  196 (238)
                      .+++-|.++++|-  .++.    ...|+.+++.|+++...
T Consensus       254 ~a~i~~~~~lgE~--~~~~----~~iG~~lI~~gv~~~~~  287 (295)
T PRK11689        254 LSAALAALLLSTP--LSFS----FWQGVAMVTAGSLLCWL  287 (295)
T ss_pred             HHHHHHHHHhCCC--CcHH----HHHHHHHHHHhHHHHhh
Confidence            5677778888873  3443    45677788888876543

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=95.53  E-value=0.0057  Score=57.24  Aligned_cols=62  Identities=11%  Similarity=0.102  Sum_probs=44.4

Q ss_pred             HHHHhhccccceeecchhhhhHHHHHHhhhhhhhcccCCCChhhHHHHHHHHHHHhheeeeeccccCCC
Q 026475          133 YLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHATREHE  201 (238)
Q Consensus       133 ~LNkAL~~fda~~VvPv~~v~ft~~~ii~g~I~f~e~~~~~~~~~~~f~~G~~ii~~GV~lLs~~~~~~  201 (238)
                      .-|+++++-+++...+..+.. -+.+.+.|.++++|  .+++.+    ++|.++++.|+++.++.+.++
T Consensus       272 lw~~~v~~~ga~~as~~~~L~-PV~a~llg~l~LgE--~lt~~~----~iG~~LIl~Gv~l~~~~~~~~  333 (358)
T PLN00411        272 IHSWTVRHKGPLYLAIFKPLS-ILIAVVMGAIFLND--SLYLGC----LIGGILITLGFYAVMWGKANE  333 (358)
T ss_pred             HHHHHHhccCchHHHHHHhHH-HHHHHHHHHHHhCC--CCcHHH----HHHHHHHHHHHHHHHhhhhhh
Confidence            589999999999876665543 44566677788887  345544    478889999999987544333

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=95.21  E-value=0.02  Score=53.30  Aligned_cols=62  Identities=13%  Similarity=0.122  Sum_probs=41.2

Q ss_pred             HHHHhhccccceeecchhhhhHHHHHHhhhhhhhcccCCCChhhHHHHHHHHHHHhheeeeeccccCCC
Q 026475          133 YLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHATREHE  201 (238)
Q Consensus       133 ~LNkAL~~fda~~VvPv~~v~ft~~~ii~g~I~f~e~~~~~~~~~~~f~~G~~ii~~GV~lLs~~~~~~  201 (238)
                      ..+-.+++=+|+.+.. --..=..-+++.+..+|++-  .++    .++.|+++++.|+++.+..+++.
T Consensus       249 l~p~~l~~ssAt~~nL-sLLTsd~~ali~~i~~f~~~--~~~----ly~~af~lIiiG~vvy~~~~~~~  310 (334)
T PF06027_consen  249 LVPIVLRMSSATFFNL-SLLTSDFYALIIDIFFFGYK--FSW----LYILAFALIIIGFVVYNLAESPE  310 (334)
T ss_pred             HHHHHHHhCccceeeh-HHHHhhHHHHHHHHHhcCcc--ccH----HHHHHHHHHHHHhheEEccCCcc
Confidence            3455677777764443 33334455778888888873  233    57788899999999988655544

Some of the sequences in this family are annotated as putative membrane proteins.

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=94.32  E-value=0.1  Score=40.74  Aligned_cols=80  Identities=15%  Similarity=0.230  Sum_probs=58.1

Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHHhhccccceeecchhhhhHHHHHHhhhhhhhcccCCCChhhHHHHHHHHHHHhhe
Q 026475          111 IAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSG  190 (238)
Q Consensus       111 f~~~~ty~~l~~lv~tai~Ql~~LNkAL~~fda~~VvPv~~v~ft~~~ii~g~I~f~e~~~~~~~~~~~f~~G~~ii~~G  190 (238)
                      +.+|.......+.+.+...-...+-+++++-|.+..+|+-+ .=...+.+.|..+|+|  +.++.+++    |..+++.|
T Consensus        31 ~~~~~~l~~~~~~~~~~~l~~~~~~~al~~iplg~Ay~~~~-l~~v~~~~~~~l~f~E--~ls~~~~~----Gi~lii~G  103 (111)
T PRK15051         31 KRRKHIVLWLGLALACLGLAMVLWLLVLQNVPVGIAYPMLS-LNFVWVTLAAVKLWHE--PVSPRHWC----GVAFIIGG  103 (111)
T ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHH-HHHHHHHHHHHHHhCC--CCCHHHHH----HHHHHHHH
Confidence            34444334444555666678889999999999999999999 5555667788889998  56676654    66677788


Q ss_pred             eeeeccc
Q 026475          191 TIILHAT  197 (238)
Q Consensus       191 V~lLs~~  197 (238)
                      |.+++.+
T Consensus       104 v~~i~~~  110 (111)
T PRK15051        104 IVILGST  110 (111)
T ss_pred             HHHHhcc
Confidence            8777643

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=94.25  E-value=0.12  Score=41.61  Aligned_cols=72  Identities=11%  Similarity=0.153  Sum_probs=54.9

Q ss_pred             HHHHHHHHHHHHHHHhhccccceeecchhhhhHHHHHHhhhh-hhhcccCCCChhhHHHHHHHHHHHhheeeeeccccC
Q 026475          122 VAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASA-IMFKDWSGQDVSGIASEICGFITVLSGTIILHATRE  199 (238)
Q Consensus       122 ~lv~tai~Ql~~LNkAL~~fda~~VvPv~~v~ft~~~ii~g~-I~f~e~~~~~~~~~~~f~~G~~ii~~GV~lLs~~~~  199 (238)
                      .-+++-+.-....+.+|++.|.+..+|+....+....+.+-. ++|+|  .+++.+    ..|..+++.||++++..++
T Consensus        53 lgl~~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E--~ls~~~----~iGi~lIi~GV~lv~~~~~  125 (129)
T PRK02971         53 LGLAGYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNE--TFSLKK----TLGVACIMLGVWLINLPTT  125 (129)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCC--CCCHHH----HHHHHHHHHHHHHhccCCC
Confidence            345566667788899999999999999998888666666654 48998  345544    5688899999999986544

>COG2510 Predicted membrane protein [Function unknown]

Probab=93.88  E-value=0.12  Score=41.98  Aligned_cols=85  Identities=21%  Similarity=0.361  Sum_probs=56.7

Q ss_pred             HhcCCCCcc---hhHHHHHHHHH-HHHHHHHHHHHHHhhccccceeecchhhhhHHHHHHhhhhhhhcccCCCChhhHHH
Q 026475          104 TLDGISQIA---YPQTWFFLTVA-AVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIAS  179 (238)
Q Consensus       104 t~~g~~qf~---~~~ty~~l~~l-v~tai~Ql~~LNkAL~~fda~~VvPv~~v~ft~~~ii~g~I~f~e~~~~~~~~~~~  179 (238)
                      ...|+-|-.   .+..|.+++.- +.++..++.| =+||+.-+++.|+|+--. .-..+++=|.++.+|  +++..++  
T Consensus        51 ~~~g~~~~~~~~~~k~~lflilSGla~glswl~Y-f~ALk~G~as~VvPldk~-svvl~~lls~lfL~E--~ls~~~~--  124 (140)
T COG2510          51 LVTGNWQAGGEIGPKSWLFLILSGLAGGLSWLLY-FRALKKGKASRVVPLDKT-SVVLAVLLSILFLGE--RLSLPTW--  124 (140)
T ss_pred             HhcCceecccccCcceehhhhHHHHHHHHHHHHH-HHHHhcCCcceEEEcccc-cHHHHHHHHHHHhcC--CCCHHHH--
Confidence            345665544   56666554443 3344444443 589999999999998643 233455567888887  4555544  


Q ss_pred             HHHHHHHHhheeeeecc
Q 026475          180 EICGFITVLSGTIILHA  196 (238)
Q Consensus       180 f~~G~~ii~~GV~lLs~  196 (238)
                        .|+..+.+|+.+++.
T Consensus       125 --iG~~LI~~Gailvs~  139 (140)
T COG2510         125 --IGIVLIVIGAILVSL  139 (140)
T ss_pred             --HHHHHHHhCeeeEec
Confidence              688899999999975

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=93.38  E-value=0.27  Score=38.61  Aligned_cols=81  Identities=14%  Similarity=0.194  Sum_probs=60.3

Q ss_pred             CCcchhHHHHHHHHHHHHHHHHHHHHHHhhccccceeecchhhhhHHHHHHhhhhhhhcccCCCChhhHHHHHHHHHHHh
Q 026475          109 SQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVL  188 (238)
Q Consensus       109 ~qf~~~~ty~~l~~lv~tai~Ql~~LNkAL~~fda~~VvPv~~v~ft~~~ii~g~I~f~e~~~~~~~~~~~f~~G~~ii~  188 (238)
                      +.|++|.++..   .+++...-..+|.+|+++.|-+..+|+--..=+..+.+-|.++|+|  .+++.++    .|..+++
T Consensus        25 ~gf~~~~~~i~---~~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e--~~~~~~~----~gi~lIi   95 (110)
T PRK09541         25 EGFTRLWPSVG---TIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQ--RLDLPAI----IGMMLIC   95 (110)
T ss_pred             cCCCchhHHHH---HHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCC--CCCHHHH----HHHHHHH
Confidence            34777777663   4566667788999999999988877776655566777889999998  3455544    5778899


Q ss_pred             heeeeecccc
Q 026475          189 SGTIILHATR  198 (238)
Q Consensus       189 ~GV~lLs~~~  198 (238)
                      .||.++...+
T Consensus        96 ~GVi~l~l~~  105 (110)
T PRK09541         96 AGVLVINLLS  105 (110)
T ss_pred             HHHHHHhcCC
Confidence            9999986543

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=93.24  E-value=0.089  Score=47.15  Aligned_cols=66  Identities=6%  Similarity=0.040  Sum_probs=46.3

Q ss_pred             HHHHHHHHHHhhccccceeecchhhhhHHHHHHhhhhhhhcccCCCChhhHHHHHHHHHHHhheeeeeccccC
Q 026475          127 VVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHATRE  199 (238)
Q Consensus       127 ai~Ql~~LNkAL~~fda~~VvPv~~v~ft~~~ii~g~I~f~e~~~~~~~~~~~f~~G~~ii~~GV~lLs~~~~  199 (238)
                      .+.-....|+++++.+++.+.++.|.-= ..+.+-|.++++|-  +++.+    ..|+.+++.|+++++.++.
T Consensus       223 s~~~~~l~~~~~~~~~~~~~s~~~~l~P-i~a~i~~~~~l~E~--~t~~~----iiG~~lIi~gv~~~~~~~~  288 (292)
T PRK11272        223 SIIAISAYMYLLRNVRPALATSYAYVNP-VVAVLLGTGLGGET--LSPIE----WLALGVIVFAVVLVTLGKY  288 (292)
T ss_pred             HHHHHHHHHHHHhhcCHHHHHHHHHHHH-HHHHHHHHHHcCCC--CcHHH----HHHHHHHHHHHHHHHHHHh
Confidence            3444567799999999988888766544 44555567777773  45544    5688889999998876544

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=92.60  E-value=0.38  Score=38.41  Aligned_cols=73  Identities=12%  Similarity=0.288  Sum_probs=55.2

Q ss_pred             HHHHHHHHHHHHHHHhhccccceeecchhhhhHHHHHHhhhhhhhcccCCCChhhHHHHHHHHHHHhheeeeeccccCC
Q 026475          122 VAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHATREH  200 (238)
Q Consensus       122 ~lv~tai~Ql~~LNkAL~~fda~~VvPv~~v~ft~~~ii~g~I~f~e~~~~~~~~~~~f~~G~~ii~~GV~lLs~~~~~  200 (238)
                      ..+++...=.++|.+|++.-|-++-+|+.-..=+..+.+.|.++|+|  .++..+    .+|+.+++.||.++....++
T Consensus        35 ~~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E--~~s~~~----~~gi~lIi~GVi~l~l~~~~  107 (120)
T PRK10452         35 LMLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDE--SLSLMK----IAGLTTLVAGIVLIKSGTRK  107 (120)
T ss_pred             HHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCC--CCCHHH----HHHHHHHHHHHHHhhcCCCC
Confidence            35566667789999999999999888876556666677779999998  345544    46788899999998655543

>PRK11431 multidrug efflux system protein; Provisional

Probab=92.49  E-value=0.43  Score=37.17  Aligned_cols=80  Identities=9%  Similarity=0.150  Sum_probs=56.6

Q ss_pred             CCcchhHHHHHHHHHHHHHHHHHHHHHHhhccccceeecchhhhhHHHHHHhhhhhhhcccCCCChhhHHHHHHHHHHHh
Q 026475          109 SQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVL  188 (238)
Q Consensus       109 ~qf~~~~ty~~l~~lv~tai~Ql~~LNkAL~~fda~~VvPv~~v~ft~~~ii~g~I~f~e~~~~~~~~~~~f~~G~~ii~  188 (238)
                      +.|++|.++++.   +++...=.++|.+|+|.-|....+++.-..=+..+.+-|.++|+|  +.++.++    +|+..++
T Consensus        24 ~gf~~~~~~~~~---i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e--~~~~~~~----~gi~lIi   94 (105)
T PRK11431         24 HGFSRLTPSIIT---VTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGE--SASPARL----LSLALIV   94 (105)
T ss_pred             hCCccHHHHHHH---HHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCC--CCCHHHH----HHHHHHH
Confidence            457788777754   455566788999999988877655555444455566668999998  4455554    5678889


Q ss_pred             heeeeeccc
Q 026475          189 SGTIILHAT  197 (238)
Q Consensus       189 ~GV~lLs~~  197 (238)
                      .||..|...
T Consensus        95 ~GVv~l~l~  103 (105)
T PRK11431         95 AGIIGLKLS  103 (105)
T ss_pred             HHHHhhhcc
Confidence            999888644

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=92.26  E-value=0.75  Score=34.63  Aligned_cols=67  Identities=12%  Similarity=0.084  Sum_probs=33.3

Q ss_pred             CCcchhHHHHHHHHHHHHHHHHHHHHHHhhccccceeecchhhhhHHHHHHhhhhhhhcccCCCChhhHHHH
Q 026475          109 SQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASE  180 (238)
Q Consensus       109 ~qf~~~~ty~~l~~lv~tai~Ql~~LNkAL~~fda~~VvPv~~v~ft~~~ii~g~I~f~e~~~~~~~~~~~f  180 (238)
                      +.+.++..++.   .+.+-..-..++.+|+|+-|.++.+|+.-..=+....+.|..+|+|  ..++.++++.
T Consensus        24 ~g~~~~~~~~~---~~~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E--~~s~~~~~gi   90 (93)
T PF00893_consen   24 HGFTQLIPTIL---AVVGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGE--SLSLSKWLGI   90 (93)
T ss_dssp             ----------H---HHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH----------HHHH
T ss_pred             HhhcchhhHHH---HHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCC--CCCHHHHhhe
Confidence            34556655543   3346666778999999999999999999877778888889999998  4566666554

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=92.25  E-value=0.11  Score=46.78  Aligned_cols=43  Identities=14%  Similarity=0.172  Sum_probs=33.5

Q ss_pred             HHHHHHHHHHHHhhccccceeecchhhhhHHHHHHhhhhhhhccc
Q 026475          125 VCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDW  169 (238)
Q Consensus       125 ~tai~Ql~~LNkAL~~fda~~VvPv~~v~ft~~~ii~g~I~f~e~  169 (238)
                      .+++.|. ..|+|+++.+++.+.|..|.-=.. +++-|.++++|-
T Consensus       222 ~t~i~~~-~~~~a~~~~~a~~~s~~~~l~Pv~-a~~~g~l~l~E~  264 (296)
T PRK15430        222 VTTVPLL-CFTAAATRLRLSTLGFFQYIGPTL-MFLLAVTFYGEK  264 (296)
T ss_pred             HHHHHHH-HHHHHHhcCCHHHHHHHHHHHHHH-HHHHHHHHHcCC
Confidence            5666666 889999999999999888866544 556677788873

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=91.82  E-value=0.2  Score=43.32  Aligned_cols=62  Identities=11%  Similarity=0.148  Sum_probs=43.0

Q ss_pred             HHHHHHHHhhccccceeecchhhhhHHHHHHhhhhhhhcccCCCChhhHHHHHHHHHHHhheeeeeccc
Q 026475          129 TQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHAT  197 (238)
Q Consensus       129 ~Ql~~LNkAL~~fda~~VvPv~~v~ft~~~ii~g~I~f~e~~~~~~~~~~~f~~G~~ii~~GV~lLs~~  197 (238)
                      .-....++++++-+++.+.|..+ .-...+++-+.++++|-  .+..++    .|..+++.|+.+...+
T Consensus       227 i~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~l~~~e~--~~~~~~----~G~~li~~g~~l~~~~  288 (292)
T COG0697         227 LAYLLWYYALRLLGASLVALLSL-LEPVFAALLGVLLLGEP--LSPAQL----LGAALVVLGVLLASLR  288 (292)
T ss_pred             HHHHHHHHHHHhcCchHHHHHHH-HHHHHHHHHHHHHhCCC--CcHHHH----HHHHHHHHHHHHHhcc
Confidence            34556689999999999999883 34444555678888874  244444    4557888888877655

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=91.62  E-value=0.28  Score=44.28  Aligned_cols=176  Identities=14%  Similarity=0.191  Sum_probs=90.4

Q ss_pred             CCCccccccceeeeEeeeeceeEEEEecCCCCCCCCHHHHHHHhcChhhHHHHHHHHHHHH--HH-hh--hhccccCccc
Q 026475            1 MLKERLQKMGILGCITCIVGSVVIVIHAPQEHTPNSVQEIWALATQPDFLIYVAATVSVVL--AL-VL--HFEPRCGQTN   75 (238)
Q Consensus         1 ~L~E~l~~~~~vG~~lii~G~~liV~~a~~~~~~~t~~eL~~~~~~~~Fl~Y~~~~~~~~~--~L-i~--~~~p~~g~~~   75 (238)
                      ++|+|.+++++++++++.+|..+......++++..+.+.-....      .++.+..-..+  +. .+  +...+|+...
T Consensus       111 ~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~~~~~~~~~~~~------G~~ll~~sl~~~a~~~~~qe~~~~~~~~~~  184 (303)
T PF08449_consen  111 ILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSSSSNSSSFSSAL------GIILLLLSLLLDAFTGVYQEKLFKKYGKSP  184 (303)
T ss_pred             hcCccccHHHHHHHHHHHhhHheeeecccccccccccccccchh------HHHHHHHHHHHHHHHHHHHHHHHHHhCCcH
Confidence            57999999999999999999998887765555433222111000      22211111111  01 10  1223444332


Q ss_pred             --eeEEEEEeccccccchhhhHHHHHHH-HHHhcCC--CCcchhHHHHHHHHHHHHHHHHHHHHHHhhccccceeecchh
Q 026475           76 --ILVYLGICSLMGSLTVVSIKAIGIAI-KLTLDGI--SQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPVY  150 (238)
Q Consensus        76 --~~vy~~i~~l~gs~tvl~aK~l~~~l-~~t~~g~--~qf~~~~ty~~l~~lv~tai~Ql~~LNkAL~~fda~~VvPv~  150 (238)
                        .+.|...-++.-      .=.....+ ..-+...  -...||..+..++....+...-..+.+.-.+++++....=+.
T Consensus       185 ~~~mfy~n~~~~~~------~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~~~s~~~~~g~~~i~~~~~~~~al~~t~v~  258 (303)
T PF08449_consen  185 WELMFYTNLFSLPF------LLILLFLLPTGEFRSAIRFISAHPSVLLYLLLFSLTGALGQFFIFYLIKKFSALTTTIVT  258 (303)
T ss_pred             HHHHHHHHHHHHHH------HHHHHHHHHhhHhhHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchhhhhHH
Confidence              122221111110      00000000 0000000  013577777666666666665556778888898887655443


Q ss_pred             hhhHHHHHHhhhhhhhcccCCCChhhHHHHHHHHHHHhheeeeec
Q 026475          151 YVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILH  195 (238)
Q Consensus       151 ~v~ft~~~ii~g~I~f~e~~~~~~~~~~~f~~G~~ii~~GV~lLs  195 (238)
                      =+= ...+++-|.++|++  .+++.|+++.    .+++.|..+=+
T Consensus       259 t~R-k~~sillS~~~f~~--~~~~~~~~G~----~lv~~g~~~~~  296 (303)
T PF08449_consen  259 TLR-KFLSILLSVIIFGH--PLSPLQWIGI----VLVFAGIFLYS  296 (303)
T ss_pred             HHH-HHHHHHHHHHhcCC--cCChHHHHHH----HHhHHHHHHHH
Confidence            322 45667778888874  7788777654    45666665544

; GO: 0055085 transmembrane transport

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=91.27  E-value=0.55  Score=41.72  Aligned_cols=75  Identities=17%  Similarity=0.287  Sum_probs=56.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhccccceeecchhhhhHHHHHHhhhhhhhcccCCCChhhHHHHHHHHHHHhheeeeec
Q 026475          116 TWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILH  195 (238)
Q Consensus       116 ty~~l~~lv~tai~Ql~~LNkAL~~fda~~VvPv~~v~ft~~~ii~g~I~f~e~~~~~~~~~~~f~~G~~ii~~GV~lLs  195 (238)
                      .|..++...........++++|+++-|++...|+.|.. -..+.+-|.++++|  +.+.++++    |..+.+.|+.++.
T Consensus        62 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~-p~~~~l~~~~~~~e--~~~~~~~~----g~~~~~~Gv~ll~  134 (281)
T TIGR03340        62 FWLLLAISAVANMVYFLGLAQAYHHADVGLVYPLARSS-PLLVAIWATLTLGE--TLSPLAWL----GILIITLGLLVLG  134 (281)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhcCChhhhhhHHhhh-HHHHHHHHHHHHcC--CCCHHHHH----HHHHHHHHHHHHh
Confidence            34444445555667778899999999999999999987 77777778888997  46777766    5566667887776


Q ss_pred             cc
Q 026475          196 AT  197 (238)
Q Consensus       196 ~~  197 (238)
                      .+
T Consensus       135 ~~  136 (281)
T TIGR03340       135 LS  136 (281)
T ss_pred             cc
Confidence            43

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=91.27  E-value=0.54  Score=36.89  Aligned_cols=78  Identities=14%  Similarity=0.251  Sum_probs=57.0

Q ss_pred             CCcchhHHHHHHHHHHHHHHHHHHHHHHhhccccceeecchhhhhHHHHHHhhhhhhhcccCCCChhhHHHHHHHHHHHh
Q 026475          109 SQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVL  188 (238)
Q Consensus       109 ~qf~~~~ty~~l~~lv~tai~Ql~~LNkAL~~fda~~VvPv~~v~ft~~~ii~g~I~f~e~~~~~~~~~~~f~~G~~ii~  188 (238)
                      +.|++|.+.+.   ++++...=.++|.+|+|.-|-...+|+--..=+..+.+.|.++|+|-  .++.++    .|+..++
T Consensus        30 ~gf~~~~~~~~---~~~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~--~~~~~~----~gi~lIi  100 (109)
T PRK10650         30 DGFRRKIYGIL---SLAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQR--LNRKGW----IGLVLLL  100 (109)
T ss_pred             cCCcchHHHHH---HHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCC--CCHHHH----HHHHHHH
Confidence            45777777554   34555566789999999988887777766666677778899999983  455554    4667788


Q ss_pred             heeeeec
Q 026475          189 SGTIILH  195 (238)
Q Consensus       189 ~GV~lLs  195 (238)
                      .||.++.
T Consensus       101 ~GVi~lk  107 (109)
T PRK10650        101 AGMVMIK  107 (109)
T ss_pred             HHHHHhc
Confidence            8887763

>TIGR00688 rarD rarD protein

Probab=90.99  E-value=0.095  Score=45.81  Aligned_cols=47  Identities=19%  Similarity=0.284  Sum_probs=30.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhccccceeecchhhhhHHHHHHhhh
Q 026475          116 TWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIAS  162 (238)
Q Consensus       116 ty~~l~~lv~tai~Ql~~LNkAL~~fda~~VvPv~~v~ft~~~ii~g  162 (238)
                      .|..++.+.+....=-...|+|+++.|++.+.|..|.-=....+++.
T Consensus       207 ~~~~l~~~g~~t~i~~~l~~~a~~~~~a~~~s~~~yl~Pv~~~~~~~  253 (256)
T TIGR00688       207 IWLLLVLAGLITGTPLLAFVIAANRLPLNLLGLLQYIGPTIMMLCVS  253 (256)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHH
Confidence            34433333333444556779999999999999998875555544443

This uncharacterized protein is predicted to have many membrane-spanning domains.

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=89.38  E-value=0.079  Score=47.52  Aligned_cols=62  Identities=13%  Similarity=0.153  Sum_probs=42.0

Q ss_pred             HHhhccccceeecchhhhhHHHHHHhhhhhhhcccCCCChhhHHHHHHHHHHHhheeeeeccccCCCCC
Q 026475          135 NKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHATREHEQT  203 (238)
Q Consensus       135 NkAL~~fda~~VvPv~~v~ft~~~ii~g~I~f~e~~~~~~~~~~~f~~G~~ii~~GV~lLs~~~~~~~~  203 (238)
                      ++++++-+++...-. ..+=...+++-|.++++|  .+++.++    .|..+++.|+++-+..|.++..
T Consensus       239 ~~~l~~~sa~t~sv~-~~l~pv~~~~~~~~~lge--~lt~~~~----~G~~lil~Gv~l~~~~k~~~~~  300 (302)
T TIGR00817       239 FMLLGRVSPLTHSVG-NCMKRVVVIVVSILFFGT--KISPQQV----FGTGIAIAGVFLYSRVKAQKPK  300 (302)
T ss_pred             HHHHccCCchHHHHH-hhhhhhheeeeehhhcCC--CCchhHH----HHHHHHHHHHHHHHHHhccCcC
Confidence            468888887765544 334445566678899998  3566554    5677889999988876654433

specificities overlap.

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=89.15  E-value=3.5  Score=37.37  Aligned_cols=91  Identities=10%  Similarity=0.240  Sum_probs=64.2

Q ss_pred             CCcc-hhHHHHH-HHHHHHHHHHHHHHHHHhhccccceeecchhhhhHHHHHHhhhhhhhcccCCCChhhHHHHHHHHHH
Q 026475          109 SQIA-YPQTWFF-LTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFIT  186 (238)
Q Consensus       109 ~qf~-~~~ty~~-l~~lv~tai~Ql~~LNkAL~~fda~~VvPv~~v~ft~~~ii~g~I~f~e~~~~~~~~~~~f~~G~~i  186 (238)
                      +++. ++..|+. ++.=+.-++.|+.-. ++.+.-.-+.-.|+--.+=-..+.+-|.++|+||++  ..+.+.=..++++
T Consensus        36 p~~~~~~~~~~~~~lsG~~W~iGq~~qf-~s~~~~GVS~tmPiStg~QLvg~sl~gv~~fgEW~~--~~~~~~G~~Al~l  112 (269)
T PF06800_consen   36 PAFSMSGTSFIVAFLSGAFWAIGQIGQF-KSFKKIGVSKTMPISTGLQLVGTSLIGVLFFGEWTT--TTQKIIGFLALVL  112 (269)
T ss_pred             CCcchHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhcceeeeccchhHHHHHHHHHHHhhcCCCCC--cchHHHHHHHHHH
Confidence            4554 2344433 333344555666543 577888889999998877777888999999999995  4555666668999


Q ss_pred             HhheeeeeccccCCCC
Q 026475          187 VLSGTIILHATREHEQ  202 (238)
Q Consensus       187 i~~GV~lLs~~~~~~~  202 (238)
                      ++.|+++-+.+++++.
T Consensus       113 iiiGv~lts~~~~~~~  128 (269)
T PF06800_consen  113 IIIGVILTSYQDKKSD  128 (269)
T ss_pred             HHHHHHHhcccccccc
Confidence            9999998765555544

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=87.89  E-value=2  Score=39.01  Aligned_cols=160  Identities=13%  Similarity=0.188  Sum_probs=93.1

Q ss_pred             cceeeeEeeeeceeEEEEecCCCCCCCCHHHHHHHhcChhhHHHHHHHHHHHHHHhhhhccccCccceeEEEEEeccccc
Q 026475            9 MGILGCITCIVGSVVIVIHAPQEHTPNSVQEIWALATQPDFLIYVAATVSVVLALVLHFEPRCGQTNILVYLGICSLMGS   88 (238)
Q Consensus         9 ~~~vG~~lii~G~~liV~~a~~~~~~~t~~eL~~~~~~~~Fl~Y~~~~~~~~~~Li~~~~p~~g~~~~~vy~~i~~l~gs   88 (238)
                      .+.++.+++++|+.+.....+++++..+..+..+-        +..++.-.+.+..|..-||+.+            +.+
T Consensus       105 ~G~~Al~liiiGv~lts~~~~~~~~~~~~~~~~kg--------i~~Ll~stigy~~Y~~~~~~~~------------~~~  164 (269)
T PF06800_consen  105 IGFLALVLIIIGVILTSYQDKKSDKSSSKSNMKKG--------ILALLISTIGYWIYSVIPKAFH------------VSG  164 (269)
T ss_pred             HHHHHHHHHHHHHHHhccccccccccccccchhhH--------HHHHHHHHHHHHHHHHHHHhcC------------CCh
Confidence            34668889999998887777666654333332221        1112222333444455577633            456


Q ss_pred             cchhhhHHHHHHHHHHhc---CCCCcchhHHHHH-HHHHHHHHHHHHHHHHHhhccccceeecchhhhhHHHHHHhhhhh
Q 026475           89 LTVVSIKAIGIAIKLTLD---GISQIAYPQTWFF-LTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAI  164 (238)
Q Consensus        89 ~tvl~aK~l~~~l~~t~~---g~~qf~~~~ty~~-l~~lv~tai~Ql~~LNkAL~~fda~~VvPv~~v~ft~~~ii~g~I  164 (238)
                      .+.+.-.+++.++....-   .++++.+..+|.= +..++-...-=.+++.  -+.---+.=.|+-|.. ...+.++|..
T Consensus       165 ~~~~lPqaiGm~i~a~i~~~~~~~~~~~k~~~~nil~G~~w~ignl~~~is--~~~~G~a~af~lSQ~~-vvIStlgGI~  241 (269)
T PF06800_consen  165 WSAFLPQAIGMLIGAFIFNLFSKKPFFEKKSWKNILTGLIWGIGNLFYLIS--AQKNGVATAFTLSQLG-VVISTLGGIF  241 (269)
T ss_pred             hHhHHHHHHHHHHHHHHHhhcccccccccchHHhhHHHHHHHHHHHHHHHh--HHhccchhhhhHHhHH-HHHHHhhhhe
Confidence            677778887765554321   1445555555532 2222111111112221  1233444556666766 5667788999


Q ss_pred             hhcccCCCChhhHHHHHHHHHHHhheeee
Q 026475          165 MFKDWSGQDVSGIASEICGFITVLSGTII  193 (238)
Q Consensus       165 ~f~e~~~~~~~~~~~f~~G~~ii~~GV~l  193 (238)
                      ++||.+  +..++.....|+++++.|..+
T Consensus       242 il~E~K--t~ke~~~~~~G~~Liv~G~il  268 (269)
T PF06800_consen  242 ILKEKK--TKKEMIYTLIGLILIVIGAIL  268 (269)
T ss_pred             EEEecC--chhhHHHHHHHHHHHHHhhhc
Confidence            999987  688899999999999988765

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=86.68  E-value=0.36  Score=44.05  Aligned_cols=32  Identities=31%  Similarity=0.570  Sum_probs=27.5

Q ss_pred             CCCccccccceeeeEeeeeceeEEE----EecCCCC
Q 026475            1 MLKERLQKMGILGCITCIVGSVVIV----IHAPQEH   32 (238)
Q Consensus         1 ~L~E~l~~~~~vG~~lii~G~~liV----~~a~~~~   32 (238)
                      +||||+++.+.+|+.+.+.|.++|+    +||..++
T Consensus       144 ~LkE~~t~~eaL~s~itl~GVVLIvRPpFlFG~~t~  179 (346)
T KOG4510|consen  144 FLKEPFTKFEALGSLITLLGVVLIVRPPFLFGDTTE  179 (346)
T ss_pred             HHcCCCcHHHHHHHHHhhheEEEEecCCcccCCCcc
Confidence            5899999999999999999999997    5665433

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=84.30  E-value=5.8  Score=35.69  Aligned_cols=73  Identities=14%  Similarity=0.240  Sum_probs=54.7

Q ss_pred             HHHHHHHHHHHhhccccceeecchhhhhHHHHHHhhhhhhhcccCCCChhhHHHHHHHHHHHhheeeeeccccCCC
Q 026475          126 CVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHATREHE  201 (238)
Q Consensus       126 tai~Ql~~LNkAL~~fda~~VvPv~~v~ft~~~ii~g~I~f~e~~~~~~~~~~~f~~G~~ii~~GV~lLs~~~~~~  201 (238)
                      -++.|+-| -.|.|.=..+.-.|++++.=-+.+.+-|.++|+|+.  +..+......|+++++.|+++++..++++
T Consensus        69 w~ig~~~~-~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~--t~~~~~~~~~g~~l~l~G~~l~~~~~~~~  141 (290)
T TIGR00776        69 WALGQINQ-FKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWS--TSIQTLLGLLALILIIIGVYLTSRSKDKS  141 (290)
T ss_pred             HHhhhhhH-HHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhcc--chHHHHHHHHHHHHHHHhHheEEeccccc
Confidence            33444444 346667777777888885555577788999999987  56677788999999999999998776443

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=81.36  E-value=3.7  Score=31.46  Aligned_cols=65  Identities=17%  Similarity=0.214  Sum_probs=47.5

Q ss_pred             HHHHHHHHhhccccceeecchhhhhHHHHHHhhhhhhhcccCCCChhhHHHHHHHHHHHhheeeeeccccCCC
Q 026475          129 TQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHATREHE  201 (238)
Q Consensus       129 ~Ql~~LNkAL~~fda~~VvPv~~v~ft~~~ii~g~I~f~e~~~~~~~~~~~f~~G~~ii~~GV~lLs~~~~~~  201 (238)
                      ......+.|+++-+ ..+.|+.+ .....+.+-|.++|+|  +.++.++    .|..+++.||.++..++...
T Consensus        47 ~~~~~~~~a~~~~~-~~v~~i~~-~~pi~~~ll~~~~~~e--r~~~~~~----~a~~l~~~Gv~li~~~~~~~  111 (113)
T PF13536_consen   47 VAYLLFFYALSYAP-ALVAAIFS-LSPIFTALLSWLFFKE--RLSPRRW----LAILLILIGVILIAWSDLTG  111 (113)
T ss_pred             HHHHHHHHHHHhCc-HHHHHHHH-HHHHHHHHHHHHHhcC--CCCHHHH----HHHHHHHHHHHHHhhhhccc
Confidence            44666678888888 46665555 5788888889999997  6666654    46678888999888665443

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	238
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	9e-04

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 39.5 bits (91), Expect = 9e-04
 Identities = 44/275 (16%), Positives = 80/275 (29%), Gaps = 75/275 (27%)

Query: 2   LKERLQKM---------GILGC-ITCIVGSVV----IVIHAP---------QEHTPNSVQ 38
           L++ L ++         G+LG   T +   V     +                ++P +V 
Sbjct: 140 LRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVL 199

Query: 39  EI-WALATQPDFLIYVAATVSVVLALVLHFEPRCGQTNILVYLGICSLMGSLTVVSIKAI 97
           E+   L  Q D      +  S  + L +H      Q  +   L        L        
Sbjct: 200 EMLQKLLYQIDPNWTSRSDHSSNIKLRIHSI----QAELRRLLKSKPYENCL-------- 247

Query: 98  GIAIKLTLDGISQIAYPQTW--FFLTVAAVC---VVTQLNYLNKAL-DTFNAAIVSPVYY 151
                L L  +      + W  F L+    C   + T+     K + D  +AA  + +  
Sbjct: 248 -----LVLLNVQ---NAKAWNAFNLS----CKILLTTR----FKQVTDFLSAATTTHISL 291

Query: 152 VMFT-TLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHATREHEQTTAPVGTV 210
              + TLT      +   +       +  E+         +II  + R+           
Sbjct: 292 DHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLT-TNPRRLSIIAESIRDG--------LA 342

Query: 211 TW----YVSGDSLKGAEE---EHLITIHNSDYYVQ 238
           TW    +V+ D L    E     L        + +
Sbjct: 343 TWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDR 377

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	238
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	95.95
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	95.64

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=95.95  E-value=0.0047  Score=49.15  Aligned_cols=67  Identities=18%  Similarity=0.292  Sum_probs=43.5

Q ss_pred             HHHHHHHHHHHhhccccceeecchhhhhHHHHHHhhhhhhhcccCCCChhhHHHHHHHHHHHhheeeeecccc
Q 026475          126 CVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHATR  198 (238)
Q Consensus       126 tai~Ql~~LNkAL~~fda~~VvPv~~v~ft~~~ii~g~I~f~e~~~~~~~~~~~f~~G~~ii~~GV~lLs~~~  198 (238)
                      +...-...+++|+++-|.+..+|+.-..=.+.+.+-|.++|+|=  +++.+    .+|+.+++.||++++..+
T Consensus        39 ~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~--ls~~~----~~Gi~LIi~GV~ll~~~~  105 (137)
T 2i68_A           39 CYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQR--LDLPA----IIGMMLICAGVLIINLLS  105 (137)
T ss_dssp             HHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC--------C----HHHHHHHHHHHHHHHHC-
T ss_pred             HHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCC--CCHHH----HHHHHHHHHHHHHHhcCC
Confidence            34444678999999999999999965566667778889999983  44544    568889999999997543

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=95.64  E-value=0.016  Score=43.99  Aligned_cols=69  Identities=17%  Similarity=0.297  Sum_probs=54.7

Q ss_pred             HHHHHHHHHHHHHhhccccceeecchhhhhHHHHHHhhhhhhhcccCCCChhhHHHHHHHHHHHhheeeeecccc
Q 026475          124 AVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHATR  198 (238)
Q Consensus       124 v~tai~Ql~~LNkAL~~fda~~VvPv~~v~ft~~~ii~g~I~f~e~~~~~~~~~~~f~~G~~ii~~GV~lLs~~~  198 (238)
                      +++...-...+++|+|+-|.+..+|+.-..=...+.+.|.++|+|  ..++.+    ..|..+++.||++++..+
T Consensus        37 ~~~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E--~~s~~~----~~Gi~lIi~Gv~~l~~~~  105 (110)
T 3b5d_A           37 IICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQ--RLDLPA----IIGMMLICAGVLIINLLS  105 (110)
T ss_pred             HHHHHHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCC--CCCHHH----HHHHHHHHHHHHHHhcCC
Confidence            334444567889999999999999997677777788899999998  445655    568889999999997653

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00