Citrus Sinensis ID: 026481

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------24
Protein Sequence
MEKIAVMSVRSIRRAACVRSSIIAAANNHHLRHLSSSRSLFSLSSPAASIPSKSIPFDCRSSLVMSIGCNRSFSEDVAHMPVIRDPEIQRAFKDLMAADWGELPASVIHDAKSALSRNNDDKAGQEVLKNVFSAAEAVEEFIGIIMNIKMEFDDEIGLSGENVKPLSNELSSAIRTVYQRYATYLDAFGPDESYLRKKVETELGSKMIFLKMRCAGLGSEWGKVFYYGCQCHCGILAR
Secondary Structure (PSIPRED)
cccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccHHccccccccccccccccccccHHHHHHHHHHHHcccccccHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHcHHHHHHHHHHcccccccccEEEEEcccccccccc
Secondary Structure Prediction (SSPRO)
cccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHcccccccccccccccHHcccccHHccccccccccccccccccccHHHHHHHHHHHHccHHHccHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHccHEEEEEEEcccccccccEEEEEcccHHHHHccc
Coil and Loop (DISEMBL)
MEKIAVMSVRSIRRAACVRSSIIAAANNHhlrhlsssrslfslsspaasipsksipfdcrSSLVmsigcnrsfsedvahmpvirdpEIQRAFKDLMAadwgelpasvIHDAKsalsrnnddkAGQEVLKNVFSAAEAVEEFIGIIMNIKMefddeiglsgenvkpLSNELSSAIRTVYQRYATYldafgpdesylRKKVETELGSKMIFLKMRCaglgsewgKVFYYgcqchcgilar
Flexible Loop (DISEMBL)
MEKIAVMSVRSIRRAACVRSSIIAAANNHHLRHLSSSRSLFSLSSPAASIPSKSIPFDCRSSLVMSIGCNRSFSEDVAHMPVIRDPEIQRAFKDLMAADWGELPASVIHDAKSALSRNNDDKAGQEVLKNVFSAAEAVEEFIGIIMNIKMEFDDEIGLSGENVKPLSNELSSAIRTVYQRYATYldafgpdesylRKKVETELGSKMIFLKMRCAGLGSEWGKVFYYGCQCHCGILAR
Low Complexity Region (SEG)
MEKIAVMSVRSIRRAACVRSSIIAAANNHhlrhlsssrslfslsspaasipsksipfDCRSSLVMSIGCNRSFSEDVAHMPVIRDPEIQRAFKDLMAADWGELPASVIHDAKSALSRNNDDKAGQEVLKNVFSAAEAVEEFIGIIMNIKMEFDDEIGLSGENVKPLSNELSSAIRTVYQRYATYLDAFGPDESYLRKKVETELGSKMIFLKMRCAGLGSEWGKVFYYGCQCHCGILAR
Disordered region (IsUnstruct)
******MSVRSIRRAACVRSSIIAAANNHHL***********************IPFDCRSSLVMSIGCNRSFSEDVAHMPVIRDPEIQRAFKDLMAADWGELPASVIH*****************VLKNVFSAAEAVEEFIGIIMNIKMEFDDEIGLSGENVKPLSNELSSAIRTVYQRYATYLDAFGPDESYLRKKVETELGSKMIFLKMRCAGLGSEWGKVFYYGCQCHCGIL**
Disordered Region (DISOPRED)
********VRSIRRAACVRSSIIAAANNHHLRHLSSSRS*******************CRSSLVMSIGCNRSFSEDVAHMPVIRDPEIQRAFKDLMAADWGELPASVIHD***************EVLKNVFSAAEAVEEFIGIIMNIKMEFDDEIGLSGENVKPLSNELSSAIRTVYQRYATYLDAFGPDESYLRKKVETELGSKMIFLKMRCAGLGSEWGKVFYYGCQCHCGILA*
Disordered Region (DISEMBL)
********VRSIRRAACVRSSIIAAANNHHLRHLSSSRSLFSLSSPAASIPSKSIPFDCRSSLVMSIGCNRSFSEDVAHMPVIRDPEIQRAFKDLMAADWGELPASVIHDAKSALSRNNDDKAGQEVLKNVFSAAEAVEEFIGIIMNIKMEFDDEIGLSGENVKPLSNELSSAIRTVYQRYATYLDAFGPDESYLRKKVETELGSKMIFLKMRCAGLGSEWGKVFYYGCQCHCGILAR
Disordered Region (DISPRO)
****AVMSVRSIRRAACVRSSIIAAANNHHLRHLSSSRSLFSLSSPAASIPSKSIPFDCRSSLVMSIGCNRSFSEDVAHMPVIRDPEIQRAFKDLMAADWGELPASVIHDAKSALSRNNDDKAGQEVLKNVFSAAEAVEEFIGIIMNIKMEFDDEIGLSGENVKPLSNELSSAIRTVYQRYATYLDAFGPDESYLRKKVETELGSKMIFLKMRCAGLGSEWGKVFYYGCQCHCGILAR
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MEKIAVMSVRSIRRAACVRSSIIAAANNHHLRHLSSSRSLFSLSSPAASIPSKSIPFDCRSSLVMSIGCNRSFSEDVAHMPVIRDPEIQRAFKDLMAADWGELPASVIHDAKSALSRNNDDKAGQEVLKNVFSAAEAVEEFIGIIMNIKMEFDDEIGLSGENVKPLSNELSSAIRTVYQRYATYLDAFGPDESYLRKKVETELGSKMIFLKMRCAGLGSEWGKVFYYGCQCHCGILAR
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	238	2.2.26 [Sep-21-2011]
Q9SX77	257	Uncharacterized protein A	yes	no	0.869	0.805	0.565	5e-67

>sp|Q9SX77|UMP6_ARATH Uncharacterized protein At1g47420, mitochondrial OS=Arabidopsis thaliana GN=At1g47420 PE=1 SV=1

 Score =  254 bits (648), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 125/221 (56%), Positives = 157/221 (71%), Gaps = 14/221 (6%)

Query: 27  NNHHL-RHLSSSRSLFSLSSPAAS------------IPSKSIPFDCRSSLVMSIGCNRSF 73
            +HH+ +HLS  R+L +++ P AS            I   S+  D +    M +G  R F
Sbjct: 31  GSHHIEKHLSRHRTLITVA-PNASVIGDVQINKGSFISYASVSRDLQYPRAMGMGQVRRF 89

Query: 74  SEDVAHMPVIRDPEIQRAFKDLMAADWGELPASVIHDAKSALSRNNDDKAGQEVLKNVFS 133
           SEDV+HMP + D ++  AFKDLMAADW ELP++V+ DAK+A+S+N DDKAGQE LKNVF 
Sbjct: 90  SEDVSHMPEMEDSDVLNAFKDLMAADWAELPSAVVKDAKTAISKNTDDKAGQEALKNVFR 149

Query: 134 AAEAVEEFIGIIMNIKMEFDDEIGLSGENVKPLSNELSSAIRTVYQRYATYLDAFGPDES 193
           AAEAVEEF GI+ +IKME DD IG+SGE VKPL N+++ A+RT YQRYA YLD+F P+E 
Sbjct: 150 AAEAVEEFGGILTSIKMEIDDSIGMSGEGVKPLPNDITDALRTAYQRYAEYLDSFEPEEV 209

Query: 194 YLRKKVETELGSKMIFLKMRCAGLGSEWGKVFYYGCQCHCG 234
           YL+KKVE ELG+KMI LKMRC+GLGSEWGKV   G     G
Sbjct: 210 YLKKKVEMELGTKMIHLKMRCSGLGSEWGKVTVLGTSGLSG 250

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	238
224136704	239	predicted protein [Populus trichocarpa]	0.974	0.970	0.632	1e-78
118489030	239	unknown [Populus trichocarpa x Populus d	0.974	0.970	0.628	1e-77
225458573	242	PREDICTED: uncharacterized protein At1g4	0.974	0.958	0.580	2e-74
255538368	238	conserved hypothetical protein [Ricinus	0.957	0.957	0.611	1e-72
297852338	260	hypothetical protein ARALYDRAFT_473889 [	0.873	0.8	0.565	3e-65
18401719	257	succinate dehydrogenase 5 [Arabidopsis t	0.869	0.805	0.565	3e-65
449470049	241	PREDICTED: uncharacterized protein At1g4	0.966	0.954	0.542	8e-64
351726377	225	uncharacterized protein LOC100527337 [Gl	0.718	0.76	0.643	4e-62
351722341	228	uncharacterized protein LOC100527668 [Gl	0.936	0.978	0.529	6e-61
388502854	238	unknown [Medicago truncatula]	0.743	0.743	0.593	2e-58

>gi|224136704|ref|XP_002326924.1| predicted protein [Populus trichocarpa] gi|118481849|gb|ABK92861.1| unknown [Populus trichocarpa] gi|222835239|gb|EEE73674.1| predicted protein [Populus trichocarpa]

 Score =  298 bits (763), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 148/234 (63%), Positives = 174/234 (74%), Gaps = 2/234 (0%)

Query: 1   MEKIAVMSVRSIRRAACVRSSIIAAANNHHLRHLSSSRSLFSLSSPAASIPSKSIPFDCR 60
           MEK+  +  R+I RAAC+ SS  AA +   LRH  +SRSLF++S+P+ S   K IP D R
Sbjct: 1   MEKMGAL--RTIYRAACLGSSRSAAISQSQLRHHLASRSLFTVSAPSVSTTPKRIPCDFR 58

Query: 61  SSLVMSIGCNRSFSEDVAHMPVIRDPEIQRAFKDLMAADWGELPASVIHDAKSALSRNND 120
           S   MS+G +RSFSEDV H P I+DPEI   FKDLMA +W ELP +V+ DAK ALS+N D
Sbjct: 59  SPFAMSLGSSRSFSEDVTHFPDIKDPEILNVFKDLMATNWDELPNAVVSDAKKALSKNTD 118

Query: 121 DKAGQEVLKNVFSAAEAVEEFIGIIMNIKMEFDDEIGLSGENVKPLSNELSSAIRTVYQR 180
           DK GQE+LKNVF AAEAVEEF G IM++KME DD IGLSGENVKPL    ++AIRT YQR
Sbjct: 119 DKVGQEILKNVFRAAEAVEEFGGKIMSLKMELDDIIGLSGENVKPLPELHANAIRTFYQR 178

Query: 181 YATYLDAFGPDESYLRKKVETELGSKMIFLKMRCAGLGSEWGKVFYYGCQCHCG 234
           YA YLD+FGP E YLRKKVETELGS+MI+LKMRC GLG+EWGKV   G     G
Sbjct: 179 YAAYLDSFGPGEGYLRKKVETELGSRMIYLKMRCCGLGAEWGKVTVLGTSGLAG 232

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|118489030|gb|ABK96322.1| unknown [Populus trichocarpa x Populus deltoides]

 Score =  295 bits (755), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 147/234 (62%), Positives = 173/234 (73%), Gaps = 2/234 (0%)

Query: 1   MEKIAVMSVRSIRRAACVRSSIIAAANNHHLRHLSSSRSLFSLSSPAASIPSKSIPFDCR 60
           MEK+  +  R+I RAAC+ SS  AA +   LRH  +SRSLF++S+P+ S   K IP D R
Sbjct: 1   MEKMGAL--RTIYRAACLGSSRSAAISQSQLRHHLASRSLFTVSAPSVSTTPKRIPCDFR 58

Query: 61  SSLVMSIGCNRSFSEDVAHMPVIRDPEIQRAFKDLMAADWGELPASVIHDAKSALSRNND 120
           S   MS+G +R FSEDV H P I+DPEI   FKDLMA +W ELP +V+ DAK ALS+N D
Sbjct: 59  SPFAMSLGSSRFFSEDVTHFPDIKDPEILNVFKDLMATNWDELPNAVVSDAKKALSKNTD 118

Query: 121 DKAGQEVLKNVFSAAEAVEEFIGIIMNIKMEFDDEIGLSGENVKPLSNELSSAIRTVYQR 180
           DKAGQ++LKNVF AAEAVEEF G IM++KME DD IGLSGENVKPL     +AIRT YQR
Sbjct: 119 DKAGQDILKNVFRAAEAVEEFGGKIMSLKMELDDIIGLSGENVKPLPELHDNAIRTFYQR 178

Query: 181 YATYLDAFGPDESYLRKKVETELGSKMIFLKMRCAGLGSEWGKVFYYGCQCHCG 234
           YA YLD+FGP E YLRKKVETELGS+MI+LKMRC GLG+EWGKV   G     G
Sbjct: 179 YAAYLDSFGPGEGYLRKKVETELGSRMIYLKMRCCGLGAEWGKVTVLGTSGLAG 232

Source: Populus trichocarpa x Populus deltoides

Species: Populus trichocarpa x Populus deltoides

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225458573|ref|XP_002284591.1| PREDICTED: uncharacterized protein At1g47420, mitochondrial [Vitis vinifera] gi|147811478|emb|CAN63226.1| hypothetical protein VITISV_002665 [Vitis vinifera] gi|302142337|emb|CBI19540.3| unnamed protein product [Vitis vinifera]

 Score =  284 bits (727), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 137/236 (58%), Positives = 174/236 (73%), Gaps = 4/236 (1%)

Query: 1   MEKIAVMSVRSIRRAACVRSSIIAAANNHH--LRHLSSSRSLFSLSSPAASIPSKSIPFD 58
           ME++ ++  RS+ R+A  RS   +A  NHH  LRH +SSRSLF+L +P A    +++P D
Sbjct: 1   MERMVLL--RSLFRSAAFRSCRFSAVVNHHQQLRHYASSRSLFNLFAPTAIASRQALPSD 58

Query: 59  CRSSLVMSIGCNRSFSEDVAHMPVIRDPEIQRAFKDLMAADWGELPASVIHDAKSALSRN 118
           CR+   +SIG  RSFSEDV+H+PVI+DPEIQ  FKDLMAA W ELP SVI  A   LS+N
Sbjct: 59  CRTPFAVSIGSTRSFSEDVSHLPVIKDPEIQTVFKDLMAASWDELPDSVISSANKVLSKN 118

Query: 119 NDDKAGQEVLKNVFSAAEAVEEFIGIIMNIKMEFDDEIGLSGENVKPLSNELSSAIRTVY 178
            DDKAGQE L NVF AAEA  EF GI++ ++ME DD +G+SGENVKPL +E  +A+ TV+
Sbjct: 119 TDDKAGQEALANVFRAAEAAVEFGGILVTLRMEIDDLVGISGENVKPLPDEFVNALVTVF 178

Query: 179 QRYATYLDAFGPDESYLRKKVETELGSKMIFLKMRCAGLGSEWGKVFYYGCQCHCG 234
           +RY TYLD+FGPDE++LRKKVE ELG+KMI LK+RC+ LG+EWGKV   G     G
Sbjct: 179 KRYTTYLDSFGPDEAFLRKKVEMELGTKMIHLKLRCSDLGAEWGKVTLLGTSGLSG 234

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255538368|ref|XP_002510249.1| conserved hypothetical protein [Ricinus communis] gi|223550950|gb|EEF52436.1| conserved hypothetical protein [Ricinus communis]

 Score =  278 bits (712), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 145/237 (61%), Positives = 178/237 (75%), Gaps = 9/237 (3%)

Query: 1   MEKIAVMSVRSIRRAACVRSSIIAAA-NNHHL--RHLSSSRSLFSLSSPAASIPSKSIPF 57
           MEK  V+ +RSI RAAC RSS IA A   HHL   HLSSSRS+FSL+S +  + S    F
Sbjct: 1   MEKKMVL-LRSICRAACFRSSRIADAFTQHHLLPHHLSSSRSIFSLASSSNRVSSD---F 56

Query: 58  DCRSSLVMSIGCNRSFSEDVAHMPVIRDPEIQRAFKDLMAADWGELPASVIHDAKSALSR 117
             R S  M +G  R FSEDV  +P I+DP++++AFK+LMAA W ELP  +++D K ALS+
Sbjct: 57  GYRFS--MGVGNRRCFSEDVTRLPAIQDPQVKKAFKNLMAASWDELPDPLLYDVKIALSK 114

Query: 118 NNDDKAGQEVLKNVFSAAEAVEEFIGIIMNIKMEFDDEIGLSGENVKPLSNELSSAIRTV 177
           N DDK+GQ++LKNVF AAEAVEEF GI+M++KME DD IGLSGENVKPLS+E ++A+RT 
Sbjct: 115 NTDDKSGQDILKNVFRAAEAVEEFGGILMSLKMELDDNIGLSGENVKPLSDEYANALRTA 174

Query: 178 YQRYATYLDAFGPDESYLRKKVETELGSKMIFLKMRCAGLGSEWGKVFYYGCQCHCG 234
           +QRY+ YLDAFGPDE +LRKKVE ELGSKMI+LKMRC+GL S WGKV   G     G
Sbjct: 175 FQRYSAYLDAFGPDEGFLRKKVEMELGSKMIYLKMRCSGLDSAWGKVTVLGTSGLAG 231

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297852338|ref|XP_002894050.1| hypothetical protein ARALYDRAFT_473889 [Arabidopsis lyrata subsp. lyrata] gi|297339892|gb|EFH70309.1| hypothetical protein ARALYDRAFT_473889 [Arabidopsis lyrata subsp. lyrata]

 Score =  254 bits (648), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 126/223 (56%), Positives = 160/223 (71%), Gaps = 15/223 (6%)

Query: 27  NNHHLR-HLSSSRSLFS------LSSPAASIP---SKSIPFDC-----RSSLVMSIGCNR 71
            +HH+  HLS  RSL +      L +P+AS+      +I + C     + S  + +G  R
Sbjct: 31  GSHHIEEHLSRHRSLMTVVDKSPLVTPSASVTIGKGSAISYGCARRDLQYSRAIGVGQVR 90

Query: 72  SFSEDVAHMPVIRDPEIQRAFKDLMAADWGELPASVIHDAKSALSRNNDDKAGQEVLKNV 131
            FSEDV+HMP ++D ++  AFKDLMAADW ELP++V+ +AKSA+S+N DDKAGQE LKNV
Sbjct: 91  RFSEDVSHMPEMKDSDVLNAFKDLMAADWAELPSAVVRNAKSAISKNTDDKAGQEALKNV 150

Query: 132 FSAAEAVEEFIGIIMNIKMEFDDEIGLSGENVKPLSNELSSAIRTVYQRYATYLDAFGPD 191
           F AAEAVEEF GI+ +IKME DD IG+SGE VKPL N+++ A+RT YQRYA YLD+F P+
Sbjct: 151 FRAAEAVEEFGGILTSIKMEIDDSIGMSGEGVKPLPNDITDALRTAYQRYADYLDSFEPE 210

Query: 192 ESYLRKKVETELGSKMIFLKMRCAGLGSEWGKVFYYGCQCHCG 234
           E YL+KKVE ELG+KMI LKMRC+GLGSEWGKV   G     G
Sbjct: 211 EVYLKKKVEMELGTKMIHLKMRCSGLGSEWGKVTVLGTSGLSG 253

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18401719|ref|NP_564506.1| succinate dehydrogenase 5 [Arabidopsis thaliana] gi|25091506|sp|Q9SX77.1|UMP6_ARATH RecName: Full=Uncharacterized protein At1g47420, mitochondrial; Flags: Precursor gi|5668814|gb|AAD46040.1|AC007519_25 ESTs gb|H36253 and gb|AA04251 come from this gene [Arabidopsis thaliana] gi|12744995|gb|AAK06877.1|AF344326_1 unknown protein [Arabidopsis thaliana] gi|14334512|gb|AAK59453.1| unknown protein [Arabidopsis thaliana] gi|15450966|gb|AAK96754.1| Unknown protein [Arabidopsis thaliana] gi|17104551|gb|AAL34164.1| unknown protein [Arabidopsis thaliana] gi|21536627|gb|AAM60959.1| unknown [Arabidopsis thaliana] gi|23198274|gb|AAN15664.1| Unknown protein [Arabidopsis thaliana] gi|332194047|gb|AEE32168.1| succinate dehydrogenase 5 [Arabidopsis thaliana]

 Score =  254 bits (648), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 125/221 (56%), Positives = 157/221 (71%), Gaps = 14/221 (6%)

Query: 27  NNHHL-RHLSSSRSLFSLSSPAAS------------IPSKSIPFDCRSSLVMSIGCNRSF 73
            +HH+ +HLS  R+L +++ P AS            I   S+  D +    M +G  R F
Sbjct: 31  GSHHIEKHLSRHRTLITVA-PNASVIGDVQINKGSFISYASVSRDLQYPRAMGMGQVRRF 89

Query: 74  SEDVAHMPVIRDPEIQRAFKDLMAADWGELPASVIHDAKSALSRNNDDKAGQEVLKNVFS 133
           SEDV+HMP + D ++  AFKDLMAADW ELP++V+ DAK+A+S+N DDKAGQE LKNVF 
Sbjct: 90  SEDVSHMPEMEDSDVLNAFKDLMAADWAELPSAVVKDAKTAISKNTDDKAGQEALKNVFR 149

Query: 134 AAEAVEEFIGIIMNIKMEFDDEIGLSGENVKPLSNELSSAIRTVYQRYATYLDAFGPDES 193
           AAEAVEEF GI+ +IKME DD IG+SGE VKPL N+++ A+RT YQRYA YLD+F P+E 
Sbjct: 150 AAEAVEEFGGILTSIKMEIDDSIGMSGEGVKPLPNDITDALRTAYQRYAEYLDSFEPEEV 209

Query: 194 YLRKKVETELGSKMIFLKMRCAGLGSEWGKVFYYGCQCHCG 234
           YL+KKVE ELG+KMI LKMRC+GLGSEWGKV   G     G
Sbjct: 210 YLKKKVEMELGTKMIHLKMRCSGLGSEWGKVTVLGTSGLSG 250

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449470049|ref|XP_004152731.1| PREDICTED: uncharacterized protein At1g47420, mitochondrial-like [Cucumis sativus] gi|449496011|ref|XP_004160011.1| PREDICTED: uncharacterized protein At1g47420, mitochondrial-like [Cucumis sativus]

 Score =  249 bits (635), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 129/238 (54%), Positives = 166/238 (69%), Gaps = 8/238 (3%)

Query: 1   MEKIAVMSVRSIRRAACVRSSIIAAANNHHLRHLSS--SRSLFSLSS--PAASIPSKSIP 56
           MEK  ++  RS+ R+   RS  IA   + +L   +   +RS F LSS  P+ S   + + 
Sbjct: 1   MEKTVIL--RSLLRSVRARSYGIAGVTHRNLLQSNHQVARSFFYLSSHRPSFSDSPQRVS 58

Query: 57  FDCRSSLVMSIGCNRSFSEDVAHMPVIRDPEIQRAFKDLMAADWGELPASVIHDAKSALS 116
            DC  S    +G  R FS DV  MP I DP++Q  FKDLMAA W +LP +VI+D K+ALS
Sbjct: 59  SDC--SYPSGVGHARYFSADVVSMPTIEDPKLQNVFKDLMAASWDKLPEAVIYDVKTALS 116

Query: 117 RNNDDKAGQEVLKNVFSAAEAVEEFIGIIMNIKMEFDDEIGLSGENVKPLSNELSSAIRT 176
            + DDKAG+E+++NVF AAEA EEF  +++N+KME DD IGLSGENVKPLS+EL  A+ T
Sbjct: 117 GSTDDKAGKEIVENVFRAAEAAEEFGDMLINLKMEIDDSIGLSGENVKPLSDELKKALHT 176

Query: 177 VYQRYATYLDAFGPDESYLRKKVETELGSKMIFLKMRCAGLGSEWGKVFYYGCQCHCG 234
           V++RY  YLD+FGP+E+YLRKKVETELG+KMI+LKMRC+GLGSEWGKV   G     G
Sbjct: 177 VHERYIAYLDSFGPEENYLRKKVETELGTKMIYLKMRCSGLGSEWGKVSVLGTSGLSG 234

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351726377|ref|NP_001238404.1| uncharacterized protein LOC100527337 [Glycine max] gi|255632117|gb|ACU16411.1| unknown [Glycine max]

 Score =  243 bits (621), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 110/171 (64%), Positives = 141/171 (82%)

Query: 58  DCRSSLVMSIGCNRSFSEDVAHMPVIRDPEIQRAFKDLMAADWGELPASVIHDAKSALSR 117
           +CRS L M +G  R +SEDV HMP I+DP +  AFKDLMA  W ELP SVI D K+ALS+
Sbjct: 42  ECRSPLSMGLGSMRFYSEDVTHMPNIKDPVLYNAFKDLMAVSWSELPDSVISDVKNALSK 101

Query: 118 NNDDKAGQEVLKNVFSAAEAVEEFIGIIMNIKMEFDDEIGLSGENVKPLSNELSSAIRTV 177
           N DDKAG+EV++NVF AA+A+EEF GI++++K+EFDD IG+SGE+VKPL + + +A+ T+
Sbjct: 102 NTDDKAGKEVVENVFCAAKAIEEFGGILISLKLEFDDSIGMSGEDVKPLPDHIKNALHTI 161

Query: 178 YQRYATYLDAFGPDESYLRKKVETELGSKMIFLKMRCAGLGSEWGKVFYYG 228
           + RY+TYL++FGPDESYLRKKVETELG+KMI LKMRC+GLG+EWGKV   G
Sbjct: 162 FDRYSTYLNSFGPDESYLRKKVETELGAKMIHLKMRCSGLGAEWGKVTVLG 212

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351722341|ref|NP_001235705.1| uncharacterized protein LOC100527668 [Glycine max] gi|255632912|gb|ACU16810.1| unknown [Glycine max]

 Score =  239 bits (610), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 124/234 (52%), Positives = 161/234 (68%), Gaps = 11/234 (4%)

Query: 1   MEKIAVMSVRSIRRAACVRSSIIAAANNHH-LRHLSSSRSLFSLSSPAASIPSKSIPFDC 59
           MEK+  M +R + R+   RS       NH  LR    SRS   L SP+ S        +C
Sbjct: 1   MEKM--MRLRPLFRSLSCRSYHAFPFINHVVLRPSLISRSPNPLPSPSHS--------EC 50

Query: 60  RSSLVMSIGCNRSFSEDVAHMPVIRDPEIQRAFKDLMAADWGELPASVIHDAKSALSRNN 119
            S   M +G  R +SED+ H+P I+DP +  AFKDLMA  W ELP SV+ D K+ LS+N 
Sbjct: 51  MSPFSMGLGSMRFYSEDLTHVPNIKDPALYNAFKDLMAVSWSELPDSVVSDVKNVLSKNT 110

Query: 120 DDKAGQEVLKNVFSAAEAVEEFIGIIMNIKMEFDDEIGLSGENVKPLSNELSSAIRTVYQ 179
           DDKAG+E ++NVF AAEA+EEF GI++++K+EFDD IGLSGE+VKPL + + +A+ T + 
Sbjct: 111 DDKAGKEAVENVFRAAEAIEEFGGILVSLKLEFDDSIGLSGEDVKPLPDHIKNALCTTFD 170

Query: 180 RYATYLDAFGPDESYLRKKVETELGSKMIFLKMRCAGLGSEWGKVFYYGCQCHC 233
           RY+TYL++FGPDE+YLRKKVETELG+KMI LKMRC+GLG+EWGKV   G    C
Sbjct: 171 RYSTYLNSFGPDENYLRKKVETELGAKMIHLKMRCSGLGAEWGKVTVLGTSGTC 224

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388502854|gb|AFK39493.1| unknown [Medicago truncatula]

 Score =  231 bits (590), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 105/177 (59%), Positives = 136/177 (76%)

Query: 58  DCRSSLVMSIGCNRSFSEDVAHMPVIRDPEIQRAFKDLMAADWGELPASVIHDAKSALSR 117
           +CRS     IG  R +SE+V HMP I+DPE+   FKDL+A +W +L  +V+ DAK ALS+
Sbjct: 55  ECRSPFSNGIGSMRFYSEEVTHMPDIKDPELYSVFKDLLAENWSDLSDAVVSDAKHALSK 114

Query: 118 NNDDKAGQEVLKNVFSAAEAVEEFIGIIMNIKMEFDDEIGLSGENVKPLSNELSSAIRTV 177
           + +D+AG+EV+ NVF AA+AVEEF GI+  +KME DD IGLSGE+VKPL + + +A+RT+
Sbjct: 115 STEDEAGKEVVTNVFRAAQAVEEFGGILNTLKMEIDDSIGLSGEDVKPLPDHMQNALRTI 174

Query: 178 YQRYATYLDAFGPDESYLRKKVETELGSKMIFLKMRCAGLGSEWGKVFYYGCQCHCG 234
           + RY TYL+AFGPDE+YLRKKVE ELG+KMI+LKMRC+GLGSEWGKV   G     G
Sbjct: 175 FDRYTTYLNAFGPDENYLRKKVEQELGTKMIYLKMRCSGLGSEWGKVTVLGTSGLAG 231

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	238
TAIR|locus:2015428	257	SDH5 "AT1G47420" [Arabidopsis	0.718	0.665	0.654	2.2e-57

TAIR|locus:2015428 SDH5 "AT1G47420" [Arabidopsis thaliana (taxid:3702)]

 Score = 590 (212.7 bits), Expect = 2.2e-57, P = 2.2e-57
 Identities = 112/171 (65%), Positives = 136/171 (79%)

Query:    58 DCRSSLVMSIGCNRSFSEDVAHMPVIRDPEIQRAFKDLMAADWGELPASVIHDAKSALSR 117
             D +    M +G  R FSEDV+HMP + D ++  AFKDLMAADW ELP++V+ DAK+A+S+
Sbjct:    74 DLQYPRAMGMGQVRRFSEDVSHMPEMEDSDVLNAFKDLMAADWAELPSAVVKDAKTAISK 133

Query:   118 NNDDKAGQEVLKNVFSAAEAVEEFIGIIMNIKMEFDDEIGLSGENVKPLSNELSSAIRTV 177
             N DDKAGQE LKNVF AAEAVEEF GI+ +IKME DD IG+SGE VKPL N+++ A+RT 
Sbjct:   134 NTDDKAGQEALKNVFRAAEAVEEFGGILTSIKMEIDDSIGMSGEGVKPLPNDITDALRTA 193

Query:   178 YQRYATYLDAFGPDESYLRKKVETELGSKMIFLKMRCAGLGSEWGKVFYYG 228
             YQRYA YLD+F P+E YL+KKVE ELG+KMI LKMRC+GLGSEWGKV   G
Sbjct:   194 YQRYAEYLDSFEPEEVYLKKKVEMELGTKMIHLKMRCSGLGSEWGKVTVLG 244


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.321   0.134   0.392    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      238       210   0.00080  112 3  11 22  0.47    32
                                                     31  0.48    35


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  606 (64 KB)
  Total size of DFA:  169 KB (2099 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  19.12u 0.09s 19.21t   Elapsed:  00:00:01
  Total cpu time:  19.12u 0.09s 19.21t   Elapsed:  00:00:01
  Start:  Mon May 20 15:54:17 2013   End:  Mon May 20 15:54:18 2013

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0005739 "mitochondrion" evidence=IDA

GO:0005634 "nucleus" evidence=IDA

GO:0005749 "mitochondrial respiratory chain complex II" evidence=IDA

GO:0006511 "ubiquitin-dependent protein catabolic process" evidence=RCA

GO:0009853 "photorespiration" evidence=RCA

GO:0051788 "response to misfolded protein" evidence=RCA

GO:0080129 "proteasome core complex assembly" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9SX77	UMP6_ARATH	No assigned EC number	0.5656	0.8697	0.8054	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: eugene3.00400264 SubName- Full=Putative uncharacterized protein; (240 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	238
pfam14290	238	pfam14290, DUF4370, Domain of unknown function (DU	1e-118
PLN02749	173	PLN02749, PLN02749, Uncharacterized protein At1g47	2e-92

>gnl|CDD|222654 pfam14290, DUF4370, Domain of unknown function (DUF4370)

 Score =  336 bits (862), Expect = e-118
 Identities = 147/226 (65%), Positives = 175/226 (77%), Gaps = 7/226 (3%)

Query: 1   MEKIAVMSVRSIRRAACVRSSIIAAANNHH--LRHLSSSRSLFSLSSPAASIPSKSIPFD 58
           MEK+  + +RS+ R+A  RSS  +AA+  H  LRH  SSRSLF L+SPA+      +  D
Sbjct: 1   MEKM--VLLRSLFRSAPFRSSRSSAASQGHHQLRHHLSSRSLFPLASPASP---SRLSSD 55

Query: 59  CRSSLVMSIGCNRSFSEDVAHMPVIRDPEIQRAFKDLMAADWGELPASVIHDAKSALSRN 118
           CR    MS G  R FSEDV H+P I+DPEI+ AFKDLMAA W ELP SV+ DAK ALS+N
Sbjct: 56  CRYPFAMSWGSRRFFSEDVTHLPAIKDPEIENAFKDLMAASWDELPDSVVSDAKKALSKN 115

Query: 119 NDDKAGQEVLKNVFSAAEAVEEFIGIIMNIKMEFDDEIGLSGENVKPLSNELSSAIRTVY 178
            DDKAGQE LKNVF AAEAVEEF GI++++KME DD IGLSGENVKPL + + +A+RT Y
Sbjct: 116 TDDKAGQEALKNVFRAAEAVEEFGGILVSLKMELDDLIGLSGENVKPLPDYIENALRTAY 175

Query: 179 QRYATYLDAFGPDESYLRKKVETELGSKMIFLKMRCAGLGSEWGKV 224
           QRY+TYLD+FGP+E YLRKKVETELG+KMI LKMRC+GLGSEWGKV
Sbjct: 176 QRYSTYLDSFGPEEGYLRKKVETELGTKMIHLKMRCSGLGSEWGKV 221

Length = 238

>gnl|CDD|178350 PLN02749, PLN02749, Uncharacterized protein At1g47420

 Score =  268 bits (688), Expect = 2e-92
 Identities = 110/154 (71%), Positives = 131/154 (85%)

Query: 71  RSFSEDVAHMPVIRDPEIQRAFKDLMAADWGELPASVIHDAKSALSRNNDDKAGQEVLKN 130
           R FSEDV+H+P I DPEI +AFKDLMAA W ELP SV++DAK ALS+N DDKAGQE LKN
Sbjct: 3   RRFSEDVSHLPEISDPEILKAFKDLMAASWDELPDSVVNDAKKALSKNTDDKAGQEALKN 62

Query: 131 VFSAAEAVEEFIGIIMNIKMEFDDEIGLSGENVKPLSNELSSAIRTVYQRYATYLDAFGP 190
           VF AAEAVEEF G +++++ME DD IGLSGENVKPL + + +A+ T YQRYA YLD+FGP
Sbjct: 63  VFRAAEAVEEFGGTLVSLRMEIDDLIGLSGENVKPLPDYIENALETAYQRYAAYLDSFGP 122

Query: 191 DESYLRKKVETELGSKMIFLKMRCAGLGSEWGKV 224
           +E+YL+KKVE ELG+KMI LKMRC+GLGSEWGKV
Sbjct: 123 EENYLKKKVEMELGTKMIHLKMRCSGLGSEWGKV 156

Length = 173

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	238
PF14290	239	DUF4370: Domain of unknown function (DUF4370)	100.0
PLN02749	173	Uncharacterized protein At1g47420	100.0

>PF14290 DUF4370: Domain of unknown function (DUF4370)

Probab=100.00  E-value=8.6e-123  Score=805.59  Aligned_cols=233  Identities=62%  Similarity=0.972  Sum_probs=222.6

Q ss_pred             CchhhhHHHHHHHHHHhhhhhhHHHh--hhhhhhhhhccccccccCCCCCCCCCCCCCCCcCCcccccccccccccccCC
Q 026481            1 MEKIAVMSVRSIRRAACVRSSIIAAA--NNHHLRHLSSSRSLFSLSSPAASIPSKSIPFDCRSSLVMSIGCNRSFSEDVA   78 (238)
Q Consensus         1 mek~~m~~lrs~~r~a~~~s~~~~~~--~~~~~~h~s~~~sl~t~~~~~~~~ps~~~~~d~~~~~s~~~~~~R~fS~d~~   78 (238)
                      ||| ||+.||++||++|++|++.++.  .+|+++|..+.+++++++++.+  +. ++++||++||+||||++|+||+|++
T Consensus         1 m~~-~~~~lr~~~R~~~~~s~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~--~~-~~~s~~~~~~a~s~~~~R~fS~d~~   76 (239)
T PF14290_consen    1 MEK-AMSALRSLLRSAALRSSRSSSASRSHHQIRHHLSSRSLFTLSSPSS--RN-RISSDCGGPFAMSWGSRRFFSEDVS   76 (239)
T ss_pred             Cch-HHHHHHHHHHHHHHHHhhhhhhhcchhhhhhhhhhccccCCCCccc--cc-cccccccCCcccccchhhhcccccc
Confidence            887 5999999999999999987555  3377788558999999988873  33 8899999999999999999999999


Q ss_pred             CCCCCCCHHHHHHHHHHHHcccCCCchhHHHHHHhhhcccCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCC
Q 026481           79 HMPVIRDPEIQRAFKDLMAADWGELPASVIHDAKSALSRNNDDKAGQEVLKNVFSAAEAVEEFIGIIMNIKMEFDDEIGL  158 (238)
Q Consensus        79 hlP~i~Dpei~~afKdLmA~sW~elp~svv~~ak~alSk~tdDkAGqeaL~nvfrAAeAvEeFgGiL~sLrmeiDDl~Gl  158 (238)
                      |||+|+||||++|||||||+||+|||++||++|||||||||||+||||||+||||||||||||||+|++||||||||||+
T Consensus        77 hlP~i~Dp~i~~afKdLmAasW~elp~svv~~akkalSk~tdD~AGqeaL~nvfRAAeAvEeFgG~L~tLrm~idDl~Gl  156 (239)
T PF14290_consen   77 HLPAISDPEIEKAFKDLMAASWDELPDSVVNEAKKALSKNTDDKAGQEALKNVFRAAEAVEEFGGILVTLRMEIDDLCGL  156 (239)
T ss_pred             cCCCCCCHHHHHHHHHHHhcchhhCCHHHHHHHHHHHhccCccchhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHhcCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCcCCchHHHHHHHHHHHHHHHHHhhcCCChhHHHHHHHHhhhhhhhhhhhhhcCCCCCcceeEEeeccccccccc
Q 026481          159 SGENVKPLSNELSSAIRTVYQRYATYLDAFGPDESYLRKKVETELGSKMIFLKMRCAGLGSEWGKVFYYGCQCHCGILA  237 (238)
Q Consensus       159 sGEnVkPLPd~~~~Al~tay~rY~~YLdsFgpdE~yLrKKVE~ELGtkmI~LKmRcsGlgseWGKVtllGTSg~sGsy~  237 (238)
                      ||||||||||+++|||+|+|+||++|||||||||+|||||||+|||+|||||||||||||||||||||||||||||||.
T Consensus       157 sGEnv~PLP~~~~~Al~t~y~rY~~YL~sFgp~E~yLrKKVE~ELGtkmi~lKmRcsGlg~eWgkvtllGTSGlsGSYv  235 (239)
T PF14290_consen  157 SGENVKPLPDYIENALRTAYKRYMTYLDSFGPDEHYLRKKVEMELGTKMIHLKMRCSGLGSEWGKVTLLGTSGLSGSYV  235 (239)
T ss_pred             CCCCCCCCcHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHhhhhHHHHhhhhcCCCcccceeeEeecCcCccchh
Confidence            9999999999999999999999999999999999999999999999999999999999999999999999999999995

>PLN02749 Uncharacterized protein At1g47420

Probab=100.00  E-value=1e-108  Score=692.48  Aligned_cols=169  Identities=66%  Similarity=1.060  Sum_probs=167.7

Q ss_pred             ccccccccCCCCCCCCCHHHHHHHHHHHHcccCCCchhHHHHHHhhhcccCCchhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 026481           69 CNRSFSEDVAHMPVIRDPEIQRAFKDLMAADWGELPASVIHDAKSALSRNNDDKAGQEVLKNVFSAAEAVEEFIGIIMNI  148 (238)
Q Consensus        69 ~~R~fS~d~~hlP~i~Dpei~~afKdLmA~sW~elp~svv~~ak~alSk~tdDkAGqeaL~nvfrAAeAvEeFgGiL~sL  148 (238)
                      ++|+||+|++|||+|+||+|++|||||||+||+|||++|+++||+|||||||||||||||+||||||||||||||+|++|
T Consensus         1 ~~R~fs~d~~~lP~i~Dp~i~~afkdLma~sW~elp~sv~~~~kkalsk~tddkagqeaL~nvfrAAeAveeFgG~L~sL   80 (173)
T PLN02749          1 LRRRFSEDVSHLPEISDPEILKAFKDLMAASWDELPDSVVNDAKKALSKNTDDKAGQEALKNVFRAAEAVEEFGGTLVSL   80 (173)
T ss_pred             CccccccccccCCCCCCHHHHHHHHHHHhcchhhCChHHHHHHHHHHhcCCcchhhHHHHHHHHHHHHHHHHHhhHHHHH
Confidence            58999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhhhccCCCCCCCcCCchHHHHHHHHHHHHHHHHHhhcCCChhHHHHHHHHhhhhhhhhhhhhhcCCCCCcceeEEee
Q 026481          149 KMEFDDEIGLSGENVKPLSNELSSAIRTVYQRYATYLDAFGPDESYLRKKVETELGSKMIFLKMRCAGLGSEWGKVFYYG  228 (238)
Q Consensus       149 rmeiDDl~GlsGEnVkPLPd~~~~Al~tay~rY~~YLdsFgpdE~yLrKKVE~ELGtkmI~LKmRcsGlgseWGKVtllG  228 (238)
                      |||||||||+||||||||||+++|||+|+||||++|||||||||+|||||||+|||+|||||||||||||||||||||||
T Consensus        81 rmeidDl~GlsGEnv~PLPd~~~~Al~tay~rY~~YLdsFgp~E~yLrKKVE~ELG~kmi~lKmRcsGl~~eWgkvtllG  160 (173)
T PLN02749         81 RMEIDDLIGLSGENVKPLPDYIENALETAYQRYAAYLDSFGPEENYLKKKVEMELGTKMIHLKMRCSGLGSEWGKVTLLG  160 (173)
T ss_pred             HHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHhHHHHHHHhhhcCCCcccceeeEee
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccccccccc
Q 026481          229 CQCHCGILA  237 (238)
Q Consensus       229 TSg~sGsy~  237 (238)
                      ||||||||.
T Consensus       161 TSGlsGSYv  169 (173)
T PLN02749        161 TSGLSGSYV  169 (173)
T ss_pred             cCcccchhh
Confidence            999999995

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00