Citrus Sinensis ID: 026616


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230------
MAKGDVERGTTELYPGMIEPPEIRWAFIRKVYAIVAMQILLTIAVASVVVFVKPIHKFLASGTPGLVLLIVVFILTLLLICPLFAYRKRHPWNFVLLVLFTILLSFTLGVACAFSKGKIILEAFILTGAAVAGLTLYTFWAVKRGKDFSFLGPFLSASLLVLIVFGIFMFFFRVGKVAHMIYGLMGAIIFSGYIVYDTNNLIKRYTYDEYITAAIELYLDIVNIFIAFLQMLGATD
ccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccc
ccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHccHcccccHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccc
makgdvergttelypgmieppeIRWAFIRKVYAIVAMQILLTIAVASVVVFVKPIhkflasgtpGLVLLIVVFILTLLLIcplfayrkrhpwNFVLLVLFTILLSFTLGVACAFSKGKIILEAFILTGAAVAGLTLYTFWAVkrgkdfsflgpfLSASLLVLIVFGIFMFFFRVGKVAHMIYGLMGAIIFSGYivydtnnlikrytYDEYITAAIELYLDIVNIFIAFLQMLGATD
makgdvergttelypgmieppeIRWAFIRKVYAIVAMQILLTIAVASVVVFVKPIHKFLASGTPGLVLLIVVFILTLLLICPLFAYRKRHPWNFVLLVLFTILLSFTLGVACAFSKGKIILEAFILTGAAVAGLTLYTFWAVKRGKDFSFLGPFLSASLLVLIVFGIFMFFFRVGKVAHMIYGLMGAIIFSGYIVYDTNNLIKRYTYDEYITAAIELYLDIVNIFIAFLQMLGATD
MAKGDVERGTTELYPGMIEPPEIRWAFIRKVYAIVAMQILLTIAVASVVVFVKPIHKFLASGTPGlvllivvfiltllliCPLFAYRKRHPWNFVLLVLFTILLSFTLGVACAFSKGKIILEAFILTGAAVAGLTLYTFWAVKRGKDFSFLGPFLSASLLVLIVFGIFMFFFRVGKVAHMIYGLMGAIIFSGYIVYDTNNLIKRYTYDEYITAAIELYLDIVNIFIAFLQMLGATD
************LYPGMIEPPEIRWAFIRKVYAIVAMQILLTIAVASVVVFVKPIHKFLASGTPGLVLLIVVFILTLLLICPLFAYRKRHPWNFVLLVLFTILLSFTLGVACAFSKGKIILEAFILTGAAVAGLTLYTFWAVKRGKDFSFLGPFLSASLLVLIVFGIFMFFFRVGKVAHMIYGLMGAIIFSGYIVYDTNNLIKRYTYDEYITAAIELYLDIVNIFIAFLQML****
***GD*E**TTEL*P*MIEPPEIRWAFIRKVYAIVAMQILLTIAVASVVVFVKPIHKFLASGTPGLVLLIVVFILTLLLICPLFAYRKRHPWNFVLLVLFTILLSFTLGVACAFSKGKIILEAFILTGAAVAGLTLYTFWAVKRGKDFSFLGPFLSASLLVLIVFGIFMFFFRVGKVAHMIYGLMGAIIFSGYIVYDTNNLIKRYTYDEYITAAIELYLDIVNIFIAFLQMLGA**
*********TTELYPGMIEPPEIRWAFIRKVYAIVAMQILLTIAVASVVVFVKPIHKFLASGTPGLVLLIVVFILTLLLICPLFAYRKRHPWNFVLLVLFTILLSFTLGVACAFSKGKIILEAFILTGAAVAGLTLYTFWAVKRGKDFSFLGPFLSASLLVLIVFGIFMFFFRVGKVAHMIYGLMGAIIFSGYIVYDTNNLIKRYTYDEYITAAIELYLDIVNIFIAFLQMLGATD
***********ELYPGMIEPPEIRWAFIRKVYAIVAMQILLTIAVASVVVFVKPIHKFLASGTPGLVLLIVVFILTLLLICPLFAYRKRHPWNFVLLVLFTILLSFTLGVACAFSKGKIILEAFILTGAAVAGLTLYTFWAVKRGKDFSFLGPFLSASLLVLIVFGIFMFFFRVGKVAHMIYGLMGAIIFSGYIVYDTNNLIKRYTYDEYITAAIELYLDIVNIFIAFLQMLGAT*
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooo
ooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiii
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MAKGDVERGTTELYPGMIEPPEIRWAFIRKVYAIVAMQILLTIAVASVVVFVKPIHKFLASGTPGLVLLIVVFILTLLLICPLFAYRKRHPWNFVLLVLFTILLSFTLGVACAFSKGKIILEAFILTGAAVAGLTLYTFWAVKRGKDFSFLGPFLSASLLVLIVFGIFMFFFRVGKVAHMIYGLMGAIIFSGYIVYDTNNLIKRYTYDEYITAAIELYLDIVNIFIAFLQMLGATD
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query236 2.2.26 [Sep-21-2011]
Q94A20256 BI1-like protein OS=Arabi no no 0.970 0.894 0.502 3e-60
Q9DA39238 Protein lifeguard 4 OS=Mu yes no 0.877 0.869 0.370 5e-29
Q9HC24238 Protein lifeguard 4 OS=Ho yes no 0.881 0.873 0.390 2e-28
Q49P94237 Golgi anti-apoptotic prot no no 0.826 0.822 0.381 2e-28
Q8BJZ3309 Protein lifeguard 3 OS=Mu no no 0.974 0.744 0.307 1e-26
O74888266 Bax inhibitor 1 OS=Schizo yes no 0.872 0.774 0.372 1e-26
Q969X1311 Protein lifeguard 3 OS=Ho no no 0.961 0.729 0.306 4e-26
Q11080276 Transmembrane BAX inhibit yes no 0.894 0.764 0.311 4e-21
Q7Z429371 Protein lifeguard 1 OS=Ho no no 0.881 0.560 0.291 8e-20
Q9ESF4345 Protein lifeguard 1 OS=Mu no no 0.881 0.602 0.277 1e-17
>sp|Q94A20|BI1L_ARATH BI1-like protein OS=Arabidopsis thaliana GN=At4g15470 PE=2 SV=1 Back     alignment and function desciption
 Score =  231 bits (590), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 118/235 (50%), Positives = 167/235 (71%), Gaps = 6/235 (2%)

Query: 5   DVERGTTE--LYPGM-IEPPEIRWAFIRKVYAIVAMQILLTIAVASVVVFVKPIHKFLAS 61
           D+E G  E  LYPG+     ++RW FIRKVY I++ Q+LLT  +++VVV   P++  L +
Sbjct: 24  DLEMGVGEATLYPGLSYGENQLRWGFIRKVYGILSAQLLLTTLISAVVVLNPPVNDLL-T 82

Query: 62  GTPGLVLLIVVFILTLLLICPLFAYRKRHPWNFVLLVLFTILLSFTLGVACAFSKGKIIL 121
           G+PG++L +   I+  +LI PL  Y ++HP N +LL LFT+ LSFT+GV+CA ++G+I+L
Sbjct: 83  GSPGILLFLC--IVPFILIWPLHIYHQKHPVNLILLALFTVSLSFTVGVSCAMTEGRIVL 140

Query: 122 EAFILTGAAVAGLTLYTFWAVKRGKDFSFLGPFLSASLLVLIVFGIFMFFFRVGKVAHMI 181
           +A ILT + V  LT YTFWA K+GKDFSFLGP L  SL++L+V      FF +G  +  +
Sbjct: 141 QALILTLSVVGSLTAYTFWAAKKGKDFSFLGPILFTSLIILVVTSFIQMFFPLGPTSVAV 200

Query: 182 YGLMGAIIFSGYIVYDTNNLIKRYTYDEYITAAIELYLDIVNIFIAFLQMLGATD 236
           YG   A++F GYIVYDT+NLIKR+TYDEYI A++ LYLDI+N+F+  L++L   D
Sbjct: 201 YGGFSALVFCGYIVYDTDNLIKRFTYDEYILASVALYLDILNLFLTILRILRQGD 255





Arabidopsis thaliana (taxid: 3702)
>sp|Q9DA39|LFG4_MOUSE Protein lifeguard 4 OS=Mus musculus GN=Tmbim4 PE=2 SV=1 Back     alignment and function description
>sp|Q9HC24|LFG4_HUMAN Protein lifeguard 4 OS=Homo sapiens GN=TMBIM4 PE=1 SV=3 Back     alignment and function description
>sp|Q49P94|GAAP_VACCL Golgi anti-apoptotic protein OS=Vaccinia virus (strain Lister) GN=L6 PE=1 SV=1 Back     alignment and function description
>sp|Q8BJZ3|LFG3_MOUSE Protein lifeguard 3 OS=Mus musculus GN=Tmbim1 PE=1 SV=1 Back     alignment and function description
>sp|O74888|BXI1_SCHPO Bax inhibitor 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=bxi1 PE=3 SV=1 Back     alignment and function description
>sp|Q969X1|LFG3_HUMAN Protein lifeguard 3 OS=Homo sapiens GN=TMBIM1 PE=1 SV=2 Back     alignment and function description
>sp|Q11080|TMBI4_CAEEL Transmembrane BAX inhibitor motif-containing protein 4 OS=Caenorhabditis elegans GN=tmbi-4 PE=3 SV=2 Back     alignment and function description
>sp|Q7Z429|LFG1_HUMAN Protein lifeguard 1 OS=Homo sapiens GN=GRINA PE=2 SV=1 Back     alignment and function description
>sp|Q9ESF4|LFG1_MOUSE Protein lifeguard 1 OS=Mus musculus GN=Grina PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query236
224102107243 predicted protein [Populus trichocarpa] 0.983 0.954 0.618 3e-79
61889383242 putative receptor associated protein [Ca 0.991 0.966 0.581 1e-73
356570594243 PREDICTED: BI1-like protein-like [Glycin 1.0 0.971 0.549 4e-72
359477361242 PREDICTED: BI1-like protein-like [Vitis 0.995 0.971 0.588 9e-72
15218701247 transmembrane BAX inhibitor motif-contai 0.991 0.947 0.567 2e-71
297843106246 glutamate binding protein [Arabidopsis l 0.991 0.951 0.565 3e-71
357440615244 BI1-like protein [Medicago truncatula] g 0.995 0.963 0.557 6e-71
357115930249 PREDICTED: BI1-like protein-like [Brachy 0.987 0.935 0.540 2e-69
297601677249 Os03g0745600 [Oryza sativa Japonica Grou 0.995 0.943 0.559 6e-69
449455364238 PREDICTED: BI1-like protein-like [Cucumi 0.915 0.907 0.591 1e-68
>gi|224102107|ref|XP_002312548.1| predicted protein [Populus trichocarpa] gi|222852368|gb|EEE89915.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  300 bits (769), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 144/233 (61%), Positives = 185/233 (79%), Gaps = 1/233 (0%)

Query: 5   DVERG-TTELYPGMIEPPEIRWAFIRKVYAIVAMQILLTIAVASVVVFVKPIHKFLASGT 63
           D+E G + +LYP M EPP++RWAFIRKVY I+AMQ+LLT+ VA+ VVFV PI +F+   T
Sbjct: 10  DMEAGISNQLYPMMQEPPQLRWAFIRKVYIILAMQLLLTVGVAATVVFVPPIPRFILHTT 69

Query: 64  PGLVLLIVVFILTLLLICPLFAYRKRHPWNFVLLVLFTILLSFTLGVACAFSKGKIILEA 123
           PGL + IV  ILTL+L+ PL  Y KRHPWN+  + LFTI ++F +G++CA +KG+I+LEA
Sbjct: 70  PGLAIYIVSLILTLILLWPLHVYSKRHPWNYFFMALFTICIAFAVGLSCALTKGRIVLEA 129

Query: 124 FILTGAAVAGLTLYTFWAVKRGKDFSFLGPFLSASLLVLIVFGIFMFFFRVGKVAHMIYG 183
            ILT   V GLTLYTFWA KRG+DFSFLGPFL +++LVLIVFG+  F F +GK + MIYG
Sbjct: 130 AILTSVVVVGLTLYTFWAAKRGQDFSFLGPFLFSAVLVLIVFGLIQFLFPLGKWSLMIYG 189

Query: 184 LMGAIIFSGYIVYDTNNLIKRYTYDEYITAAIELYLDIVNIFIAFLQMLGATD 236
            +GAI+FSG+IVYDT NLIKR++YDEYI+AAI LYLDI+N+F+A L +  A D
Sbjct: 190 CLGAIVFSGFIVYDTGNLIKRFSYDEYISAAINLYLDIINLFLALLNIFNAVD 242




Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|61889383|emb|CAI53895.2| putative receptor associated protein [Capsicum chinense] Back     alignment and taxonomy information
>gi|356570594|ref|XP_003553470.1| PREDICTED: BI1-like protein-like [Glycine max] Back     alignment and taxonomy information
>gi|359477361|ref|XP_002283304.2| PREDICTED: BI1-like protein-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|15218701|ref|NP_171806.1| transmembrane BAX inhibitor motif-containing protein [Arabidopsis thaliana] gi|334182259|ref|NP_001184896.1| transmembrane BAX inhibitor motif-containing protein [Arabidopsis thaliana] gi|4587571|gb|AAD25802.1|AC006550_10 Belongs to the PF|01027 Uncharacterized protein family UPF0005 with 7 transmembrane domains [Arabidopsis thaliana] gi|38603872|gb|AAR24681.1| At1g03070 [Arabidopsis thaliana] gi|51969040|dbj|BAD43212.1| putative glutamate/aspartate-binding peptide [Arabidopsis thaliana] gi|332189403|gb|AEE27524.1| transmembrane BAX inhibitor motif-containing protein [Arabidopsis thaliana] gi|332189404|gb|AEE27525.1| transmembrane BAX inhibitor motif-containing protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297843106|ref|XP_002889434.1| glutamate binding protein [Arabidopsis lyrata subsp. lyrata] gi|297335276|gb|EFH65693.1| glutamate binding protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|357440615|ref|XP_003590585.1| BI1-like protein [Medicago truncatula] gi|355479633|gb|AES60836.1| BI1-like protein [Medicago truncatula] Back     alignment and taxonomy information
>gi|357115930|ref|XP_003559738.1| PREDICTED: BI1-like protein-like [Brachypodium distachyon] Back     alignment and taxonomy information
>gi|297601677|ref|NP_001051246.2| Os03g0745600 [Oryza sativa Japonica Group] gi|215769025|dbj|BAH01254.1| unnamed protein product [Oryza sativa Japonica Group] gi|218193245|gb|EEC75672.1| hypothetical protein OsI_12468 [Oryza sativa Indica Group] gi|255674891|dbj|BAF13160.2| Os03g0745600 [Oryza sativa Japonica Group] Back     alignment and taxonomy information
>gi|449455364|ref|XP_004145423.1| PREDICTED: BI1-like protein-like [Cucumis sativus] gi|449523067|ref|XP_004168546.1| PREDICTED: BI1-like protein-like [Cucumis sativus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query236
TAIR|locus:2007509247 AT1G03070 "AT1G03070" [Arabido 0.974 0.931 0.547 1.7e-66
TAIR|locus:2077309239 BIL4 "AT3G63310" [Arabidopsis 0.991 0.979 0.521 1.8e-64
TAIR|locus:2132318248 AT4G02690 "AT4G02690" [Arabido 0.983 0.935 0.525 2.3e-62
TAIR|locus:2130170235 AT4G14730 "AT4G14730" [Arabido 0.983 0.987 0.497 1e-61
TAIR|locus:2130190256 AT4G15470 "AT4G15470" [Arabido 0.970 0.894 0.485 8.6e-56
UNIPROTKB|E1C1Z9237 TMBIM4 "Uncharacterized protei 0.868 0.864 0.382 4.7e-32
ZFIN|ZDB-GENE-040426-2152236 tmbim4 "transmembrane BAX inhi 0.868 0.868 0.382 4.7e-32
RGD|735173238 Tmbim4 "transmembrane BAX inhi 0.877 0.869 0.359 5.4e-31
UNIPROTKB|Q9HC24238 TMBIM4 "Protein lifeguard 4" [ 0.877 0.869 0.364 6.9e-31
UNIPROTKB|E2R4D8238 TMBIM4 "Uncharacterized protei 0.877 0.869 0.373 1.1e-30
TAIR|locus:2007509 AT1G03070 "AT1G03070" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 676 (243.0 bits), Expect = 1.7e-66, P = 1.7e-66
 Identities = 126/230 (54%), Positives = 166/230 (72%)

Query:     7 ERGTTELYPGMIEPPEIRWAFIRKVYAIVAMQILLTIAVASVVVFVKPIHKFLASGTPGX 66
             E G   LYP M+E PE+RW FIRKVY+I+A Q+L TIAVAS VVFV+PI  F A+ + G 
Sbjct:    18 EGGERSLYPTMLESPELRWGFIRKVYSIIAFQLLATIAVASTVVFVRPIAVFFATTSAGL 77

Query:    67 XXXXXXXXXXXXXXCPLFAYRKRHPWNFVLLVLFTILLSFTLGVACAFSKGKIILEAFIL 126
                           CPL+ Y ++HP N++LL +FT+ L+F +G+ CAF+ GK+ILEA IL
Sbjct:    78 ALWIVLIITPLIVMCPLYYYHQKHPVNYLLLGIFTVALAFAVGLTCAFTSGKVILEAAIL 137

Query:   127 TGAAVAGLTLYTFWAVKRGKDFSFLGPFLSASLLVLIVFGIFMFFFRVGKVAHMIYGLMG 186
             T   V  LT+YTFWA K+G DF+FLGPFL  +L+VL+VF +   FF +G+++ MIYG + 
Sbjct:   138 TTVVVLSLTVYTFWAAKKGYDFNFLGPFLFGALIVLMVFALIQIFFPLGRISVMIYGCLA 197

Query:   187 AIIFSGYIVYDTNNLIKRYTYDEYITAAIELYLDIVNIFIAFLQMLGATD 236
             AIIF GYIVYDT+NLIKRY+YDEYI AA+ LYLDI+N+F+A L +  A +
Sbjct:   198 AIIFCGYIVYDTDNLIKRYSYDEYIWAAVSLYLDIINLFLALLTIFRAAE 247




GO:0008150 "biological_process" evidence=ND
GO:0016595 "glutamate binding" evidence=ISS
GO:0006457 "protein folding" evidence=RCA
GO:0009408 "response to heat" evidence=RCA
GO:0009644 "response to high light intensity" evidence=RCA
GO:0042542 "response to hydrogen peroxide" evidence=RCA
TAIR|locus:2077309 BIL4 "AT3G63310" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2132318 AT4G02690 "AT4G02690" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2130170 AT4G14730 "AT4G14730" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2130190 AT4G15470 "AT4G15470" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|E1C1Z9 TMBIM4 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-040426-2152 tmbim4 "transmembrane BAX inhibitor motif containing 4" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
RGD|735173 Tmbim4 "transmembrane BAX inhibitor motif containing 4" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|Q9HC24 TMBIM4 "Protein lifeguard 4" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|E2R4D8 TMBIM4 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
O31539YETJ_BACSUNo assigned EC number0.30190.80930.8925yesno
Q9HC24LFG4_HUMANNo assigned EC number0.39060.88130.8739yesno
Q9DA39LFG4_MOUSENo assigned EC number0.37030.87710.8697yesno

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query236
cd10429233 cd10429, GAAP_like, Golgi antiapoptotic protein 7e-72
cd10428217 cd10428, LFG_like, Proteins similar to and includi 2e-42
pfam01027205 pfam01027, Bax1-I, Inhibitor of apoptosis-promotin 2e-33
cd06181202 cd06181, BI-1-like, BAX inhibitor (BI)-1/YccA-like 1e-27
cd10432211 cd10432, BI-1-like_bacterial, Bacterial BAX inhibi 7e-27
COG0670233 COG0670, COG0670, Integral membrane protein, inter 7e-25
cd10433205 cd10433, YccA_like, YccA-like proteins 3e-19
cd10430213 cd10430, BI-1, BAX inhibitor (BI)-1 3e-09
PRK10447219 PRK10447, PRK10447, HflBKC-binding inner membrane 2e-06
cd10431264 cd10431, GHITM, Growth-hormone inducible transmemb 2e-06
>gnl|CDD|198411 cd10429, GAAP_like, Golgi antiapoptotic protein Back     alignment and domain information
 Score =  218 bits (558), Expect = 7e-72
 Identities = 91/216 (42%), Positives = 134/216 (62%), Gaps = 6/216 (2%)

Query: 21  PEIRWAFIRKVYAIVAMQILLTIAVASVVVFVKPIHKFLASGTPGLVLLIVVFILTLLLI 80
           PEIR AF+RKVY+I+++Q+L T AV+++      I  F+ S      L ++  I +L+L+
Sbjct: 24  PEIRMAFLRKVYSILSVQLLATTAVSALFYLSPSIKTFVQSHPW---LFLISLIGSLILL 80

Query: 81  CPLFAYRKRHPWNFVLLVLFTILLSFTLGVACAFSKGKIILEAFILTGAAVAGLTLYTFW 140
             L+  R  HP N +LL LFT+  ++T+G+  +F  GKI+L+A ILT     GLT YTF 
Sbjct: 81  IALYWKRHSHPVNLILLSLFTLCEAYTVGLVVSFYDGKIVLQALILTLGVFVGLTAYTFQ 140

Query: 141 AVKRGKDFSFLGPFLSASLLVLIVFGIFMFFFRVGKVAHMIYGLMGAIIFSGYIVYDTNN 200
                +DFS  G  L   L  LI+  +   FF       ++Y  +GA++FSGYIVYDT  
Sbjct: 141 T---KRDFSSFGALLFILLWALILLALIFQFFPYSPTFELVYAGLGALLFSGYIVYDTQL 197

Query: 201 LIKRYTYDEYITAAIELYLDIVNIFIAFLQMLGATD 236
           ++KR + DEYI AAI LYLDI+N+F++ L++L A +
Sbjct: 198 IMKRLSPDEYILAAISLYLDIINLFLSILRILAAMN 233


GAAP (or transmembrane BAX inhibitor motif containing 4) is a regulator of apoptosis that is related to the BAX inhibitor (BI)-1 like family of small transmembrane proteins, which have been shown to have an antiapoptotic effect either by stimulating the antiapoptotic function of Bcl-2, a well-characterized oncogene, or by inhibiting the proapoptotic effect of Bax, another member of the Bcl-2 family. Human GAAP has been linked to the modulation of intracellular fluxes of Ca(2+), by suppressing influx from the extracellular medium and reducing release from intracellular stores. A viral homolog (vaccinia virus vGAAP) acts similar to its human counterpart in inhibiting apoptosis. Length = 233

>gnl|CDD|198410 cd10428, LFG_like, Proteins similar to and including lifeguard (LFG), a putative regulator of apoptosis Back     alignment and domain information
>gnl|CDD|216251 pfam01027, Bax1-I, Inhibitor of apoptosis-promoting Bax1 Back     alignment and domain information
>gnl|CDD|198409 cd06181, BI-1-like, BAX inhibitor (BI)-1/YccA-like protein family Back     alignment and domain information
>gnl|CDD|198414 cd10432, BI-1-like_bacterial, Bacterial BAX inhibitor (BI)-1/YccA-like proteins Back     alignment and domain information
>gnl|CDD|223742 COG0670, COG0670, Integral membrane protein, interacts with FtsH [General function prediction only] Back     alignment and domain information
>gnl|CDD|198415 cd10433, YccA_like, YccA-like proteins Back     alignment and domain information
>gnl|CDD|198412 cd10430, BI-1, BAX inhibitor (BI)-1 Back     alignment and domain information
>gnl|CDD|182469 PRK10447, PRK10447, HflBKC-binding inner membrane protein; Provisional Back     alignment and domain information
>gnl|CDD|198413 cd10431, GHITM, Growth-hormone inducible transmembrane protein Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 236
PRK10447219 HflBKC-binding inner membrane protein; Provisional 100.0
cd06181212 BI-1-like BAX inhibitor (BI)-1 like protein family 100.0
KOG2322237 consensus N-methyl-D-aspartate receptor glutamate- 100.0
COG0670233 Integral membrane protein, interacts with FtsH [Ge 100.0
PF01027205 Bax1-I: Inhibitor of apoptosis-promoting Bax1; Int 100.0
KOG1629235 consensus Bax-mediated apoptosis inhibitor TEGT/BI 100.0
KOG1630336 consensus Growth hormone-induced protein and relat 99.79
PF12811274 BaxI_1: Bax inhibitor 1 like ; InterPro: IPR010539 99.68
COG4760276 Predicted membrane protein [Function unknown] 98.85
PF09925145 DUF2157: Predicted membrane protein (DUF2157); Int 89.74
>PRK10447 HflBKC-binding inner membrane protein; Provisional Back     alignment and domain information
Probab=100.00  E-value=3.6e-42  Score=290.59  Aligned_cols=202  Identities=23%  Similarity=0.357  Sum_probs=175.2

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHhhhccCCcHHHHHH
Q 026616           18 IEPPEIRWAFIRKVYAIVAMQILLTIAVASVVVFVKPIHKFLASGTPGLVLLIVVFILTLLLICPLFAYRKRHPWNFVLL   97 (236)
Q Consensus        18 ~~~~~~r~~fl~kvy~~l~~~l~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~l~~~~~~~p~~~~~l   97 (236)
                      .++...+++|+||||.+++.+++.+++++++....+.       +++   ..++.+++++++++...+ +|++|.|+.++
T Consensus        11 ~~~~~~~~~~Lr~vY~lLa~tl~~aa~ga~v~~~~~~-------~~~---~~~~~~~~~~gl~~~~~~-~~~~~~~~~ll   79 (219)
T PRK10447         11 RTSLLSTHKVLRNTYFLLSLTLAFSAITATASTVLML-------PSP---GLILTLVGMYGLMFLTYK-TANKPTGILSA   79 (219)
T ss_pred             hHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHcc-------chh---HHHHHHHHHHHHHHHHHH-HHcCCHHHHHH
Confidence            3344468899999999999999999999988764321       111   123445666666665444 57899999999


Q ss_pred             HHHHHHHHHHHHHHHHhc----chhHHHHHHHHHHHHHHHHHHHHHhhcccCccccchHHHHHHHHHHHHHHHHHHHHhc
Q 026616           98 VLFTILLSFTLGVACAFS----KGKIILEAFILTGAAVAGLTLYTFWAVKRGKDFSFLGPFLSASLLVLIVFGIFMFFFR  173 (236)
Q Consensus        98 ~~ft~~~g~~l~~~~~~~----~~~iv~~A~~~T~~if~~ls~~a~~a~~tk~d~~~~~~~l~~~l~~l~v~~l~~~f~~  173 (236)
                      +.||.++|+++||++.++    +|++|.+|+++|+++|++++++++   +||||++++|+.+++++++++++++.|+|++
T Consensus        80 f~fT~~~G~~lg~i~~~y~~~~~~~iV~~A~~~Ta~iF~~ls~~a~---~tk~Dfs~lg~~L~~~l~~li~~~l~~~F~~  156 (219)
T PRK10447         80 FAFTGFLGYILGPILNTYLSAGMGDVIALALGGTALVFFCCSAYVL---TTRKDMSFLGGMLMAGIVVVLIGMVANIFLQ  156 (219)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHH---HHhhhHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence            999999999999999865    579999999999999999999998   9999999999999999999999999999997


Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 026616          174 VGKVAHMIYGLMGAIIFSGYIVYDTNNLIKRYTYDEYITAAIELYLDIVNIFIAFLQMLGAT  235 (236)
Q Consensus       174 ~~~~~~~i~~~~g~~lf~~~i~~Dtq~i~~~~~~~dyv~~Al~LylDiinLF~~iL~il~~~  235 (236)
                       ++..+.+++++|+++||+|++||||+|+|+ ++|||+.||++||+|++|+|+++|||+++.
T Consensus       157 -s~~~~~~~s~~g~llfsgyilyDTq~Ii~~-g~~dyi~aAl~LYlDiinlFl~lL~il~~~  216 (219)
T PRK10447        157 -LPALHLAISAVFILISSGAILFETSNIIHG-GETNYIRATVSLYVSLYNIFVSLLSILGFA  216 (219)
T ss_pred             -cHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CchHHHHHHHHHHHHHHHHHHHHHHHHccc
Confidence             567899999999999999999999999975 689999999999999999999999999864



>cd06181 BI-1-like BAX inhibitor (BI)-1 like protein family Back     alignment and domain information
>KOG2322 consensus N-methyl-D-aspartate receptor glutamate-binding subunit [Signal transduction mechanisms] Back     alignment and domain information
>COG0670 Integral membrane protein, interacts with FtsH [General function prediction only] Back     alignment and domain information
>PF01027 Bax1-I: Inhibitor of apoptosis-promoting Bax1; InterPro: IPR006214 Programmed cell-death involves a set of Bcl-2 family proteins, some of which inhibit apoptosis (Bcl-2 and Bcl-XL) and some of which promote it (Bax and Bak) [] Back     alignment and domain information
>KOG1629 consensus Bax-mediated apoptosis inhibitor TEGT/BI-1 [Defense mechanisms] Back     alignment and domain information
>KOG1630 consensus Growth hormone-induced protein and related proteins [Signal transduction mechanisms] Back     alignment and domain information
>PF12811 BaxI_1: Bax inhibitor 1 like ; InterPro: IPR010539 Bax inhibitor-1 (BI1) family contains six known genes in human Back     alignment and domain information
>COG4760 Predicted membrane protein [Function unknown] Back     alignment and domain information
>PF09925 DUF2157: Predicted membrane protein (DUF2157); InterPro: IPR018677 This family of various hypothetical prokaryotic proteins has no known function Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00