Citrus Sinensis ID: 026709

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230----
Protein Sequence
MTKEFSVPPVVFPSGGNPTTAGNINQRRVPTAPFQPNRPASSAIPFMSFDIGSATPASYGGPISTSTSAGGSASFDDEEPLLDELGIHPDQIWKKTKSILNPFRVNPTVHKGSDLSGPIVLYLSFGLFQLLAGKLQFGVILGWIVVSSIFLYVVFNMLAGRNGNLDLHTCTSVVGYCMLPVVILAAFSLFLPQGGAIRFAVSAVFVLWAARASTNLMVSLADGGEEHRGLIALG
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHcccccHHHHHHHHccccccccccccccccccccHHHHHHHHHHHHHHHHccccccEEHHHHHHHHHHHHHHHHHHHccccEEEEEEEEEEccccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccEEEEEcc
Secondary Structure Prediction (SSPRO)
cccccccccEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHcccHHHHHHHHHHHHcccccccHHccccccHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEcc
Coil and Loop (DISEMBL)
mtkefsvppvvfpsggnpttagninqrrvptapfqpnrpassaipfmsfdigsatpasyggpiststsaggsasfddeeplldelgihpdqIWKKTKsilnpfrvnptvhkgsdlsgpIVLYLSFGLFQLLAGKLQFGVILGWIVVSSIFLYVVFNMLagrngnldlhtctsvvgycMLPVVILAAFSlflpqggaIRFAVSAVFVLWAARASTNLMVSLADGGEEHRGLIALG
Flexible Loop (DISEMBL)
mtkefsvppvvfpsggnpttagninqRRVPTAPFQPNRPASSAIPFMSFDIGSATPASYGGPISTSTSAGGSASFDDEEPLLDELGIHPDQIWKKTKSILNPFRVNPTVHKGSDLSGPIVLYLSFGLFQLLAGKLQFGVILGWIVVSSIFLYVVFNMLAGRNGNLDLHTCTSVVGYCMLPVVILAAFSLFLPQGGAIRFAVSAVFVLWAARASTNLMVsladggeehrglialg
Low Complexity Region (SEG)
MTKEFSVPPVVFPSGGNPTTAGNINQRRVPTAPFQPNRPASSAIPFMSFDIGSATPASYGGPIststsaggsasFDDEEPLLDELGIHPDQIWKKTKSILNPFRVNPTVHKGSDLSGPIVLYLSFGLFQLLAGKLQFGVILGWIVVSSIFLYVVFNMLAGRNGNLDLHTCTSVVGYCMLPVVILAAFSLFLPQGGAIRFAVSAVFVLWAARASTNLMVSLADGGEEHRGLIALG
Disordered region (IsUnstruct)
**********************************************************************************DELGIHPDQIWKKTKSILNPFRVNPTVHKGSDLSGPIVLYLSFGLFQLLAGKLQFGVILGWIVVSSIFLYVVFNMLAGRNGNLDLHTCTSVVGYCMLPVVILAAFSLFLPQGGAIRFAVSAVFVLWAARASTNLMVSLA*************
Disordered Region (DISOPRED)
*****SV************************************************************************PLLDELGIHPDQIWKKTKSILNPFRVNPTVHKGSDLSGPIVLYLSFGLFQLLAGKLQFGVILGWIVVSSIFLYVVFNMLAGRNGNLDLHTCTSVVGYCMLPVVILAAFSLFLPQGGAIRFAVSAVFVLWAARASTNLMVSLADGGEEHRGLIALG
Disordered Region (DISEMBL)
MTKEFSVPPVVFPSGGNPTTAGNINQRRVPTAPFQPNRPASSAIPFMSFDIGSATPASYGGPIS**********FDDEEPLLDELGIHPDQIWKKTKSILNPFRVNPTVHKGSDLSGPIVLYLSFGLFQLLAGKLQFGVILGWIVVSSIFLYVVFNMLAGRNGNLDLHTCTSVVGYCMLPVVILAAFSLFLPQGGAIRFAVSAVFVLWAARASTNLMVSLADGGEEHRGLIALG
Disordered Region (DISPRO)
****FSVPPVVFPSGGNPTT**NINQRRVPTAPFQPNRPASSAIPFMSFDIGSATPASYGGPISTSTSAGGSASFDDEEPLLDELGIHPDQIWKKTKSILNPFRVNPTVHKGSDLSGPIVLYLSFGLFQLLAGKLQFGVILGWIVVSSIFLYVVFNMLAGRNGNLDLHTCTSVVGYCMLPVVILAAFSLFLPQGGAIRFAVSAVFVLWAARASTNLMVSLADGGEEHRGLIALG
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MTKEFSVPPVVFPSGGNPTTAGNINQRRVPTAPFQPNRPASSAIPFMSFDIGSATPASYGGPISTSTSAGGSASFDDEEPLLDELGIHPDQIWKKTKSILNPFRVNPTVHKGSDLSGPIVLYLSFGLFQLLAGKLQFGVILGWIVVSSIFLYVVFNMLAGRNGNLDLHTCTSVVGYCMLPVVILAAFSLFLPQGGAIRFAVSAVFVLWAARASTNLMVSLADGGEEHRGLIALG
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	234	2.2.26 [Sep-21-2011]
Q9JIM5	254	Protein YIPF7 OS=Mus musc	yes	no	0.888	0.818	0.325	3e-25
Q7SXS2	256	Protein YIPF5 OS=Xenopus	N/A	no	0.777	0.710	0.315	1e-24
Q8N8F6	280	Protein YIPF7 OS=Homo sap	yes	no	0.858	0.717	0.333	2e-24
Q66KA5	256	Protein YIPF5 OS=Xenopus	yes	no	0.688	0.628	0.347	3e-24
Q4R5M4	257	Protein YIPF5 OS=Macaca f	N/A	no	0.790	0.719	0.318	3e-23
Q5R6W5	257	Protein YIPF5 OS=Pongo ab	yes	no	0.790	0.719	0.313	8e-23
Q969M3	257	Protein YIPF5 OS=Homo sap	no	no	0.790	0.719	0.313	8e-23
Q5E9E8	257	Protein YIPF5 OS=Bos taur	yes	no	0.799	0.727	0.306	4e-22
Q6P5I8	257	Protein YIPF5 OS=Danio re	yes	no	0.641	0.583	0.337	5e-22
Q54QY3	212	Protein YIPF5 homolog OS=	yes	no	0.628	0.693	0.34	6e-20

>sp|Q9JIM5|YIPF7_MOUSE Protein YIPF7 OS=Mus musculus GN=Yipf7 PE=2 SV=1

 Score =  115 bits (287), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 71/218 (32%), Positives = 122/218 (55%), Gaps = 10/218 (4%)

Query: 13  PSGGNPTTAGNINQRRVPTAPFQPNRPASSAIPFMSFDIGSA--TPASYGGPISTSTSAG 70
           PS  +    GN+   R P A  QP+ PA   + F+  D G     PAS     S S S  
Sbjct: 23  PSCNDSNAYGNVYGYREPQATEQPSSPAPPEM-FLPSDYGGQLFQPASNLDYYSQSPSVD 81

Query: 71  GSASFDDEEPLLDELGIHPDQIWKKTKSILNPFR-VNPTVHKGSDLSGPIVLYLSFGLFQ 129
              +FD+E PLL+ELGI+ D IW+KT ++LNP +  + ++   +DL+GPI+  ++ G   
Sbjct: 82  ---TFDEEPPLLEELGINFDHIWQKTLTVLNPMKPADGSIMNETDLTGPILFCVALGATL 138

Query: 130 LLAGKLQFGVILGWIVVSSIFLYVVFNMLAGRNGNLDLHTCTSVVGYCMLPVVILAAFSL 189
           L+AGK QFG + G   +  + ++ + N+++  N  +      SV+GYC+LP+V+L++ ++
Sbjct: 139 LMAGKAQFGYVYGMSAIGCLGIHALLNLMS--NSGVSYGCVASVLGYCLLPMVLLSSCAV 196

Query: 190 FLPQGGAIRFAVSAVFVLWAARASTNLMVS-LADGGEE 226
           F    G I    + + + W + +++ + +S LA  G++
Sbjct: 197 FFSLQGTIGTMSALLIITWCSLSASKIFISALAMEGQQ 234

Mus musculus (taxid: 10090)

>sp|Q7SXS2|YIPF5_XENLA Protein YIPF5 OS=Xenopus laevis GN=yipf5 PE=2 SV=1

 Score =  113 bits (282), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 65/206 (31%), Positives = 119/206 (57%), Gaps = 24/206 (11%)

Query: 23  NINQRRVPTAPFQPNRPASSAIPFMSFDIGSATPASYGGPISTSTSAGGSASFDDEEPLL 82
            +NQ++ P    Q  +P  +  P       +AT + YG            ++FDDE PLL
Sbjct: 53  EMNQQQQPYTG-QIYQPTQTYTP-------TATESVYG------------STFDDEPPLL 92

Query: 83  DELGIHPDQIWKKTKSILNPFRV-NPTVHKGSDLSGPIVLYLSFGLFQLLAGKLQFGVIL 141
           +ELGI+ D IW+KT ++L+P +V + ++   +DL+GP+V  L+FG   LLAGK+QFG + 
Sbjct: 93  EELGINFDHIWQKTLTVLHPLKVADGSIMNETDLAGPMVFCLAFGATLLLAGKIQFGYVY 152

Query: 142 GWIVVSSIFLYVVFNMLAGRNGNLDLHTCTSVVGYCMLPVVILAAFSLFLPQGGAIRFAV 201
           G   +  + +Y + N+++     +     +SV+GYC+LP++IL+ F++     G +   +
Sbjct: 153 GISAMGCLGMYCLLNLMSMT--GVSFGCVSSVLGYCLLPMIILSTFAVIFSLQGILGIVL 210

Query: 202 SAVFVLWAARASTNLMVS-LADGGEE 226
           +A+ + W + +++ + +S LA  G++
Sbjct: 211 AALIIGWCSFSASKIFISALAMDGQQ 236

Plays a role in transport between endoplasmic reticulum and Golgi.

Xenopus laevis (taxid: 8355)

>sp|Q8N8F6|YIPF7_HUMAN Protein YIPF7 OS=Homo sapiens GN=YIPF7 PE=1 SV=2

 Score =  112 bits (280), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 70/210 (33%), Positives = 114/210 (54%), Gaps = 9/210 (4%)

Query: 14  SGGNPTTAGNINQRRVPTAPFQPNRPASSAIPFMSFDIGSATPASYGGPISTSTSAGGS- 72
           SG +    GN+   R   A  QP +PAS     M    G A    +  P S S     S 
Sbjct: 48  SGNDSNAYGNLYGSRKQQAGEQP-QPASFVPSEMLMSSGYA--GQFFQPASNSDYYSQSP 104

Query: 73  --ASFDDEEPLLDELGIHPDQIWKKTKSILNPFR-VNPTVHKGSDLSGPIVLYLSFGLFQ 129
              SFD+E PLL+ELGIH D IW+KT ++LNP + V+ ++   +DL+GPI+  ++ G   
Sbjct: 105 YIDSFDEEPPLLEELGIHFDHIWQKTLTVLNPMKPVDGSIMNETDLTGPILFCVALGATL 164

Query: 130 LLAGKLQFGVILGWIVVSSIFLYVVFNMLAGRNGNLDLHTCTSVVGYCMLPVVILAAFSL 189
           LLAGK+QFG + G   +  + ++ + N+++  +  +      SV+GYC+LP+VIL+  ++
Sbjct: 165 LLAGKVQFGYVYGMSAIGCLVIHALLNLMS--SSGVSYGCVASVLGYCLLPMVILSGCAM 222

Query: 190 FLPQGGAIRFAVSAVFVLWAARASTNLMVS 219
           F    G      S V + W + +++ + ++
Sbjct: 223 FFSLQGIFGIMSSLVIIGWCSLSASKIFIA 252

Homo sapiens (taxid: 9606)

>sp|Q66KA5|YIPF5_XENTR Protein YIPF5 OS=Xenopus tropicalis GN=yipf5 PE=2 SV=1

 Score =  112 bits (279), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 58/167 (34%), Positives = 107/167 (64%), Gaps = 6/167 (3%)

Query: 62  PISTSTSAGGSASFDDEEPLLDELGIHPDQIWKKTKSILNPFRV-NPTVHKGSDLSGPIV 120
           P +T +  G  ++FDDE PLL+ELGI+ D IW+KT ++L+P +V +  +   +DL+GP+V
Sbjct: 74  PAATDSVYG--STFDDEPPLLEELGINFDHIWQKTLTVLHPLKVADGNIMNETDLAGPMV 131

Query: 121 LYLSFGLFQLLAGKLQFGVILGWIVVSSIFLYVVFNMLAGRNGNLDLHTCTSVVGYCMLP 180
             L+FG   LLAGK+QFG + G   +  + +Y + N+++     +     +SV+GYC+LP
Sbjct: 132 FCLAFGATLLLAGKIQFGYVYGISAIGCLGMYCLLNLMSMT--GVSFGCVSSVLGYCLLP 189

Query: 181 VVILAAFSLFLPQGGAIRFAVSAVFVLWAARASTNLMVS-LADGGEE 226
           ++IL++F++     G +   ++A+ + W + +++ + +S LA  G++
Sbjct: 190 MIILSSFAVIFSLQGILGIVLAALIIGWCSFSASKIFISALAMDGQQ 236

Plays a role in transport between endoplasmic reticulum and Golgi.

Xenopus tropicalis (taxid: 8364)

>sp|Q4R5M4|YIPF5_MACFA Protein YIPF5 OS=Macaca fascicularis GN=YIPF5 PE=2 SV=1

 Score =  108 bits (270), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 65/204 (31%), Positives = 116/204 (56%), Gaps = 19/204 (9%)

Query: 27  RRVPTAPFQPNRPASSAI--PFMSFDIGSATPASYGGPISTSTSAGGSASFDDEEPLLDE 84
           R VP    QP +P +  I  P  ++   S  P  YG             SF+DE PLL+E
Sbjct: 49  RFVPPDMMQPQQPYTGQIYQPTQAYTPASPQPF-YGN------------SFEDEPPLLEE 95

Query: 85  LGIHPDQIWKKTKSILNPFRV-NPTVHKGSDLSGPIVLYLSFGLFQLLAGKLQFGVILGW 143
           LGI+ D IW+KT ++L+P +V + ++   +DL+GP+V  L+FG   LLAGK+QFG + G 
Sbjct: 96  LGINFDHIWQKTLTVLHPLKVADGSIMNETDLAGPMVFCLAFGATLLLAGKIQFGYVYGI 155

Query: 144 IVVSSIFLYVVFNMLAGRNGNLDLHTCTSVVGYCMLPVVILAAFSLFLPQGGAIRFAVSA 203
             +  + ++ + N+++     +      SV+GYC+LP+++L++F++     G +   ++A
Sbjct: 156 SAIGCLGMFCLLNLMSMT--GVSFGCVASVLGYCLLPMILLSSFAVIFSLQGMVGIILTA 213

Query: 204 VFVLWAARASTNLMVS-LADGGEE 226
             + W + +++ + +S LA  G++
Sbjct: 214 GIIGWCSFSASKIFISALAMEGQQ 237

Plays a role in transport between endoplasmic reticulum and Golgi.

Macaca fascicularis (taxid: 9541)

>sp|Q5R6W5|YIPF5_PONAB Protein YIPF5 OS=Pongo abelii GN=YIPF5 PE=2 SV=1

 Score =  107 bits (266), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 64/204 (31%), Positives = 116/204 (56%), Gaps = 19/204 (9%)

Query: 27  RRVPTAPFQPNRPASSAI--PFMSFDIGSATPASYGGPISTSTSAGGSASFDDEEPLLDE 84
           R VP    QP +P +  I  P  ++   S  P  YG             +F+DE PLL+E
Sbjct: 49  RFVPPDMMQPQQPYTGQIYQPTQAYTPASPQPF-YGN------------NFEDEPPLLEE 95

Query: 85  LGIHPDQIWKKTKSILNPFRV-NPTVHKGSDLSGPIVLYLSFGLFQLLAGKLQFGVILGW 143
           LGI+ D IW+KT ++L+P +V + ++   +DL+GP+V  L+FG   LLAGK+QFG + G 
Sbjct: 96  LGINFDHIWQKTLTVLHPLKVADGSIMNETDLAGPMVFCLAFGATLLLAGKIQFGYVYGI 155

Query: 144 IVVSSIFLYVVFNMLAGRNGNLDLHTCTSVVGYCMLPVVILAAFSLFLPQGGAIRFAVSA 203
             +  + ++ + N+++     +      SV+GYC+LP+++L++F++     G +   ++A
Sbjct: 156 SAIGCLGMFCLLNLMSMT--GVSFGCVASVLGYCLLPMILLSSFAVIFSLQGMVGIILTA 213

Query: 204 VFVLWAARASTNLMVS-LADGGEE 226
             + W + +++ + +S LA  G++
Sbjct: 214 GIIGWCSFSASKIFISALAMEGQQ 237

Plays a role in transport between endoplasmic reticulum and Golgi.

Pongo abelii (taxid: 9601)

>sp|Q969M3|YIPF5_HUMAN Protein YIPF5 OS=Homo sapiens GN=YIPF5 PE=1 SV=1

 Score =  107 bits (266), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 64/204 (31%), Positives = 116/204 (56%), Gaps = 19/204 (9%)

Query: 27  RRVPTAPFQPNRPASSAI--PFMSFDIGSATPASYGGPISTSTSAGGSASFDDEEPLLDE 84
           R VP    QP +P +  I  P  ++   S  P  YG             +F+DE PLL+E
Sbjct: 49  RFVPPDMMQPQQPYTGQIYQPTQAYTPASPQPF-YGN------------NFEDEPPLLEE 95

Query: 85  LGIHPDQIWKKTKSILNPFRV-NPTVHKGSDLSGPIVLYLSFGLFQLLAGKLQFGVILGW 143
           LGI+ D IW+KT ++L+P +V + ++   +DL+GP+V  L+FG   LLAGK+QFG + G 
Sbjct: 96  LGINFDHIWQKTLTVLHPLKVADGSIMNETDLAGPMVFCLAFGATLLLAGKIQFGYVYGI 155

Query: 144 IVVSSIFLYVVFNMLAGRNGNLDLHTCTSVVGYCMLPVVILAAFSLFLPQGGAIRFAVSA 203
             +  + ++ + N+++     +      SV+GYC+LP+++L++F++     G +   ++A
Sbjct: 156 SAIGCLGMFCLLNLMSMT--GVSFGCVASVLGYCLLPMILLSSFAVIFSLQGMVGIILTA 213

Query: 204 VFVLWAARASTNLMVS-LADGGEE 226
             + W + +++ + +S LA  G++
Sbjct: 214 GIIGWCSFSASKIFISALAMEGQQ 237

Plays a role in transport between endoplasmic reticulum and Golgi.

Homo sapiens (taxid: 9606)

>sp|Q5E9E8|YIPF5_BOVIN Protein YIPF5 OS=Bos taurus GN=YIPF5 PE=2 SV=1

 Score =  105 bits (261), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 62/202 (30%), Positives = 114/202 (56%), Gaps = 15/202 (7%)

Query: 27  RRVPTAPFQPNRPASSAIPFMSFDIGSATPASYGGPISTSTSAGGSASFDDEEPLLDELG 86
           R VP    QP +P +  I   +      TP  + G            +F+DE PLL+ELG
Sbjct: 49  RFVPADMMQPQQPYTGQIFQPTQTYTPTTPQPFYGN-----------NFEDEPPLLEELG 97

Query: 87  IHPDQIWKKTKSILNPFRV-NPTVHKGSDLSGPIVLYLSFGLFQLLAGKLQFGVILGWIV 145
           I+ D IW+KT ++L+P +V + ++   +DL+GP+V  L+FG   LLAGK+QFG + G   
Sbjct: 98  INFDHIWQKTLTVLHPLKVADGSIMNETDLAGPMVFCLAFGATLLLAGKIQFGYVYGISA 157

Query: 146 VSSIFLYVVFNMLAGRNGNLDLHTCTSVVGYCMLPVVILAAFSLFLPQGGAIRFAVSAVF 205
           +  + ++ + N+++     +      SV+GYC+LP+++L++F++     G +   ++A  
Sbjct: 158 IGCLGMFCLLNLMSMT--GVSFGCVASVLGYCLLPMILLSSFAVIFSLQGMVGIILTAGI 215

Query: 206 VLWAARASTNLMVS-LADGGEE 226
           + W + +++ + +S LA  G++
Sbjct: 216 IGWCSFSASKIFISALAMEGQQ 237

Plays a role in transport between endoplasmic reticulum and Golgi.

Bos taurus (taxid: 9913)

>sp|Q6P5I8|YIPF5_DANRE Protein YIPF5 OS=Danio rerio GN=yipf5 PE=2 SV=1

 Score =  104 bits (260), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 52/154 (33%), Positives = 96/154 (62%), Gaps = 4/154 (2%)

Query: 75  FDDEEPLLDELGIHPDQIWKKTKSILNPFRVNP-TVHKGSDLSGPIVLYLSFGLFQLLAG 133
           F+DE PLL+ELGI+ D IW+KT ++L+P + +  ++   +DL+GP+V  L+FG   LL G
Sbjct: 86  FEDEPPLLEELGINFDHIWQKTLTVLHPLKASDGSIMNETDLAGPMVFCLAFGATLLLTG 145

Query: 134 KLQFGVILGWIVVSSIFLYVVFNMLAGRNGNLDLHTCTSVVGYCMLPVVILAAFSLFLPQ 193
           K+QFG + G   +  + +Y + N+++     +      SV+GYC+LP++IL++F +    
Sbjct: 146 KIQFGYVYGISAIGCLGMYCLLNLMSMT--GVSFGCVASVLGYCLLPMIILSSFGVIFSL 203

Query: 194 GGAIRFAVSAVFVLWAARASTNLMVS-LADGGEE 226
            G +   ++A  + W + +++ + +S LA  G++
Sbjct: 204 QGIMGIILTAAIIGWCSLSASKIFISALAMDGQQ 237

Plays a role in transport between endoplasmic reticulum and Golgi.

Danio rerio (taxid: 7955)

>sp|Q54QY3|YIPF5_DICDI Protein YIPF5 homolog OS=Dictyostelium discoideum GN=yipf5 PE=3 SV=1

 Score = 97.8 bits (242), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 51/150 (34%), Positives = 94/150 (62%), Gaps = 3/150 (2%)

Query: 72  SASFDDEEPLLDELGIHPDQIWKKTKSILNPFR-VNPTVHKGSDLSGPIVLYLSFGLFQL 130
           + SFD+E PLL+ELGI+ D I  KT S+LNP + ++  +   +DL GPI+  L  G   L
Sbjct: 38  TDSFDNELPLLEELGINFDHIRSKTLSVLNPLKKIDSHIMDDTDLGGPILFGLLLGFSLL 97

Query: 131 LAGKLQFGVILGWIVVSSIFLYVVFNMLAGRNGNLDLHTCTSVVGYCMLPVVILAAFSLF 190
           ++GK+QFG I G  ++  + +Y+V N+++ +   +D++   SV+GYC+LP++ L+  SL 
Sbjct: 98  MSGKIQFGYIYGLGLIGCVSMYIVLNLMSEK--GIDIYRVISVLGYCLLPMIFLSFTSLI 155

Query: 191 LPQGGAIRFAVSAVFVLWAARASTNLMVSL 220
           +   G + + +    ++W+  +++ + V +
Sbjct: 156 ININGMVGYILIGFAIVWSTYSASKMFVKV 185

Plays a role in transport between endoplasmic reticulum and Golgi.

Dictyostelium discoideum (taxid: 44689)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	234
224102967	250	predicted protein [Populus trichocarpa]	0.991	0.928	0.786	1e-101
255575657	254	golgi membrane protein sb140, putative [	0.982	0.905	0.779	1e-100
302746504	255	golgi membrane protein sb140 [Prunus arm	0.991	0.909	0.778	1e-100
224132124	250	predicted protein [Populus trichocarpa]	0.991	0.928	0.786	1e-100
302746510	254	golgi membrane protein sb140 [Prunus per	0.991	0.913	0.789	1e-100
356572548	248	PREDICTED: protein YIPF5-like [Glycine m	0.970	0.915	0.764	1e-96
356505356	248	PREDICTED: protein YIPF5-like [Glycine m	0.970	0.915	0.756	3e-95
449500935	253	PREDICTED: protein YIPF5-like [Cucumis s	0.974	0.901	0.756	4e-91
15231678	257	Yip1 integral membrane domain-containing	0.991	0.902	0.705	5e-91
297827109	255	hypothetical protein ARALYDRAFT_482602 [	0.987	0.905	0.741	2e-90

>gi|224102967|ref|XP_002312874.1| predicted protein [Populus trichocarpa] gi|118483530|gb|ABK93663.1| unknown [Populus trichocarpa] gi|222849282|gb|EEE86829.1| predicted protein [Populus trichocarpa]

 Score =  374 bits (960), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 184/234 (78%), Positives = 206/234 (88%), Gaps = 2/234 (0%)

Query: 1   MTKEFSVPPVVFPSGGNPT--TAGNINQRRVPTAPFQPNRPASSAIPFMSFDIGSATPAS 58
           M++EF+VPPVVFPSGGNPT  T GNI QRRVPTAPFQP+RP++S IPFMSF+IGSA   +
Sbjct: 1   MSREFAVPPVVFPSGGNPTVATGGNIQQRRVPTAPFQPSRPSNSGIPFMSFEIGSAATNT 60

Query: 59  YGGPISTSTSAGGSASFDDEEPLLDELGIHPDQIWKKTKSILNPFRVNPTVHKGSDLSGP 118
            G     +   GG+A+FDDEEPLLDELGIHPDQIWKKTKSILNPFRVNPT HK SDLSGP
Sbjct: 61  SGPIGGGTGPIGGAANFDDEEPLLDELGIHPDQIWKKTKSILNPFRVNPTFHKDSDLSGP 120

Query: 119 IVLYLSFGLFQLLAGKLQFGVILGWIVVSSIFLYVVFNMLAGRNGNLDLHTCTSVVGYCM 178
           I LYLSF LFQLLAGK+QFGVILGWIVVSSIFLYVVFNMLAGR+GNLDLHTCTSV+GYC+
Sbjct: 121 IFLYLSFCLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRHGNLDLHTCTSVIGYCL 180

Query: 179 LPVVILAAFSLFLPQGGAIRFAVSAVFVLWAARASTNLMVSLADGGEEHRGLIA 232
           LPVVIL+A SLF+PQ GAIR  +S VFV+W+ RA TNLMV++ADGGEEHRGLIA
Sbjct: 181 LPVVILSAVSLFVPQNGAIRLGISGVFVIWSTRACTNLMVAVADGGEEHRGLIA 234

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255575657|ref|XP_002528728.1| golgi membrane protein sb140, putative [Ricinus communis] gi|223531822|gb|EEF33640.1| golgi membrane protein sb140, putative [Ricinus communis]

 Score =  371 bits (953), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 187/240 (77%), Positives = 207/240 (86%), Gaps = 10/240 (4%)

Query: 1   MTKEFSVPPVVFPSGGNPTTAG--NINQRRVPTAPFQPNRPASSAIPFMSFDIGSATPAS 58
           MTKEF+VPPV+FPSGGNPT AG  N+ QRRVPTAPFQP RP++S IPFMSF+IGSAT A+
Sbjct: 1   MTKEFTVPPVIFPSGGNPTVAGASNMQQRRVPTAPFQPPRPSNSGIPFMSFEIGSATTAA 60

Query: 59  ------YGGPISTSTSAGGSASFDDEEPLLDELGIHPDQIWKKTKSILNPFRVNPTVHKG 112
                  GG  S  +SAG  A+FDDEEPLLDELGIHPDQIW+KTKSILNPFRVNP VHK 
Sbjct: 61  PFGAGPIGGGGSAVSSAG--ANFDDEEPLLDELGIHPDQIWRKTKSILNPFRVNPNVHKD 118

Query: 113 SDLSGPIVLYLSFGLFQLLAGKLQFGVILGWIVVSSIFLYVVFNMLAGRNGNLDLHTCTS 172
           SDLSGPI LYLS  LFQLLAGK+QFGVILGWIVVSSIFLYVVFNMLAGRNGNLDLHTCTS
Sbjct: 119 SDLSGPIFLYLSLCLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLDLHTCTS 178

Query: 173 VVGYCMLPVVILAAFSLFLPQGGAIRFAVSAVFVLWAARASTNLMVSLADGGEEHRGLIA 232
           V+GYC+LPVVIL+A SLFLP GG IRF ++ +FV+WA R  TNLMVS+ADGGEEHRGLI+
Sbjct: 179 VIGYCLLPVVILSAISLFLPNGGPIRFMIAGLFVIWATRVCTNLMVSVADGGEEHRGLIS 238

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|302746504|gb|ADL62864.1| golgi membrane protein sb140 [Prunus armeniaca]

 Score =  371 bits (952), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 186/239 (77%), Positives = 208/239 (87%), Gaps = 7/239 (2%)

Query: 1   MTKEFSVPPVVFPSGGNPTTAG--NINQRRVPTAPFQPNRPASSAIPFMSFDIGSATPAS 58
           MTK+F+VPPVVFPSGGNP+  G  NI QRRV TAPFQP R ++S+IPFMSFDIGSA  AS
Sbjct: 1   MTKQFAVPPVVFPSGGNPSAVGSNNIQQRRVATAPFQPPRSSTSSIPFMSFDIGSAAAAS 60

Query: 59  -----YGGPISTSTSAGGSASFDDEEPLLDELGIHPDQIWKKTKSILNPFRVNPTVHKGS 113
                +GGPI +S+  GGSASF+DEEPLLDELGIHPDQIW+KTKSILNPFR NP VHK S
Sbjct: 61  SSSSLFGGPIGSSSIPGGSASFEDEEPLLDELGIHPDQIWRKTKSILNPFRSNPAVHKDS 120

Query: 114 DLSGPIVLYLSFGLFQLLAGKLQFGVILGWIVVSSIFLYVVFNMLAGRNGNLDLHTCTSV 173
           DLSGPI+LY+S  LFQLLAGK+QFGVILGWIVVSSIFLY+VFNMLAGRNGNLDLH CTSV
Sbjct: 121 DLSGPILLYMSLCLFQLLAGKIQFGVILGWIVVSSIFLYIVFNMLAGRNGNLDLHRCTSV 180

Query: 174 VGYCMLPVVILAAFSLFLPQGGAIRFAVSAVFVLWAARASTNLMVSLADGGEEHRGLIA 232
           +GYCMLPVVIL+A SLF+PQGG+ R AV+AVFVLWA R  T LMV+LADGG+EHRGLIA
Sbjct: 181 IGYCMLPVVILSAASLFVPQGGSFRIAVAAVFVLWATRVCTGLMVALADGGDEHRGLIA 239

Source: Prunus armeniaca

Species: Prunus armeniaca

Genus: Prunus

Family: Rosaceae

Order: Rosales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224132124|ref|XP_002328191.1| predicted protein [Populus trichocarpa] gi|222837706|gb|EEE76071.1| predicted protein [Populus trichocarpa]

 Score =  369 bits (948), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 184/234 (78%), Positives = 203/234 (86%), Gaps = 2/234 (0%)

Query: 1   MTKEFSVPPVVFPSGGNPT--TAGNINQRRVPTAPFQPNRPASSAIPFMSFDIGSATPAS 58
           MTKEF+VPPVVFPS GNPT  T GNI QRRVP APFQP RP++S IPFMSFDIGSA   +
Sbjct: 1   MTKEFAVPPVVFPSVGNPTVATGGNIQQRRVPIAPFQPPRPSNSGIPFMSFDIGSAAATT 60

Query: 59  YGGPISTSTSAGGSASFDDEEPLLDELGIHPDQIWKKTKSILNPFRVNPTVHKGSDLSGP 118
            G     +   GG A+FDDEEPLLDELGIHPDQIWKKTKSILNPFRVNPT HK SDLSGP
Sbjct: 61  AGPIGGGTGPIGGVANFDDEEPLLDELGIHPDQIWKKTKSILNPFRVNPTFHKDSDLSGP 120

Query: 119 IVLYLSFGLFQLLAGKLQFGVILGWIVVSSIFLYVVFNMLAGRNGNLDLHTCTSVVGYCM 178
           I LYLSF LFQLLAGK+QFGVILGWIVVSSIFLYVVFNMLAGR+GNL+LHTCTSV+GYC+
Sbjct: 121 IFLYLSFCLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRHGNLNLHTCTSVIGYCL 180

Query: 179 LPVVILAAFSLFLPQGGAIRFAVSAVFVLWAARASTNLMVSLADGGEEHRGLIA 232
           LPVVIL+A SLF+PQ GA+RF ++ VFV+WA RA TNLMV++ADGGEEHRGLIA
Sbjct: 181 LPVVILSAVSLFVPQNGALRFGIAGVFVIWATRACTNLMVAVADGGEEHRGLIA 234

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|302746510|gb|ADL62869.1| golgi membrane protein sb140 [Prunus persica]

 Score =  368 bits (945), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 188/238 (78%), Positives = 208/238 (87%), Gaps = 6/238 (2%)

Query: 1   MTKEFSVPPVVFPSGGNPTTAG--NINQRRVPTAPFQPNRPASSAIPFMSFDIGSATPAS 58
           MTKEF+VPPVVFPSGGNP+  G  NI QRRV TAPFQP R +SS+IPFMSFDIGSA  AS
Sbjct: 1   MTKEFAVPPVVFPSGGNPSAVGSNNIQQRRVATAPFQPPRSSSSSIPFMSFDIGSAAAAS 60

Query: 59  ----YGGPISTSTSAGGSASFDDEEPLLDELGIHPDQIWKKTKSILNPFRVNPTVHKGSD 114
               +GGPI +S+  GGSASF+DEEPLLDELGIHPDQIW+KTKSILNPFR NP VHK SD
Sbjct: 61  SSSLFGGPIGSSSIPGGSASFEDEEPLLDELGIHPDQIWRKTKSILNPFRSNPAVHKDSD 120

Query: 115 LSGPIVLYLSFGLFQLLAGKLQFGVILGWIVVSSIFLYVVFNMLAGRNGNLDLHTCTSVV 174
           LSGPI+LY+S  LFQLLAGK+QFGVILGWIVVSSIFLY+VFNMLAGRNGNLDLH CTSV+
Sbjct: 121 LSGPILLYMSLCLFQLLAGKIQFGVILGWIVVSSIFLYIVFNMLAGRNGNLDLHRCTSVI 180

Query: 175 GYCMLPVVILAAFSLFLPQGGAIRFAVSAVFVLWAARASTNLMVSLADGGEEHRGLIA 232
           GYCMLPVVIL+A SLF+PQGG+ R AV+AVFVLWA R  T LMV+LADGG+EHRGLIA
Sbjct: 181 GYCMLPVVILSAASLFVPQGGSFRIAVAAVFVLWATRVCTGLMVALADGGDEHRGLIA 238

Source: Prunus persica

Species: Prunus persica

Genus: Prunus

Family: Rosaceae

Order: Rosales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356572548|ref|XP_003554430.1| PREDICTED: protein YIPF5-like [Glycine max]

 Score =  357 bits (917), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 179/234 (76%), Positives = 197/234 (84%), Gaps = 7/234 (2%)

Query: 2   TKEFSVPPVVFPSGGNPTTAG-NINQRRVPTAPFQPNRPASSAIPFMSFDIGSATPASYG 60
            KEF VPPV FPS GNP +AG N+ QRR+PT PFQPN    S IPFMSFDIGSA  ++  
Sbjct: 3   NKEFKVPPVAFPSAGNPASAGPNLQQRRMPTPPFQPN----SGIPFMSFDIGSAAASTSS 58

Query: 61  GPIST--STSAGGSASFDDEEPLLDELGIHPDQIWKKTKSILNPFRVNPTVHKGSDLSGP 118
           GPI T  +  AGGSA+FDDEEPLLDELGIHPDQIW K +S+LNPFRVN TVHK SDLSGP
Sbjct: 59  GPIYTGPAVGAGGSANFDDEEPLLDELGIHPDQIWSKIRSVLNPFRVNHTVHKDSDLSGP 118

Query: 119 IVLYLSFGLFQLLAGKLQFGVILGWIVVSSIFLYVVFNMLAGRNGNLDLHTCTSVVGYCM 178
           I+LY+SF LFQLLAGK+QFGVILGWIVVSSIFLYVVFNMLAGR GNLDLHTCTSVVGYC+
Sbjct: 119 ILLYMSFCLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRTGNLDLHTCTSVVGYCL 178

Query: 179 LPVVILAAFSLFLPQGGAIRFAVSAVFVLWAARASTNLMVSLADGGEEHRGLIA 232
           LPVVI +A SLFLP  G IR +V+AVFVLWA RAS  L+VSLADGG+EHRGLIA
Sbjct: 179 LPVVIFSALSLFLPVDGVIRLSVAAVFVLWATRASAGLVVSLADGGDEHRGLIA 232

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356505356|ref|XP_003521457.1| PREDICTED: protein YIPF5-like [Glycine max]

 Score =  353 bits (906), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 177/234 (75%), Positives = 195/234 (83%), Gaps = 7/234 (2%)

Query: 2   TKEFSVPPVVFPSGGNPTTAG-NINQRRVPTAPFQPNRPASSAIPFMSFDIGSATPASYG 60
            KEF VPPV FPS GNP  AG N+ QRR+PT PFQPN    S IPFMSFDIGSA  ++  
Sbjct: 3   NKEFKVPPVAFPSAGNPAAAGPNLQQRRMPTPPFQPN----SGIPFMSFDIGSAAASTSS 58

Query: 61  GPIST--STSAGGSASFDDEEPLLDELGIHPDQIWKKTKSILNPFRVNPTVHKGSDLSGP 118
           GPI T  +   GGSA+FDDEEPLLDELGIHPDQIW K +S+LNPFRVN TVHK SDLSGP
Sbjct: 59  GPIYTGPAVGPGGSANFDDEEPLLDELGIHPDQIWSKIRSVLNPFRVNHTVHKDSDLSGP 118

Query: 119 IVLYLSFGLFQLLAGKLQFGVILGWIVVSSIFLYVVFNMLAGRNGNLDLHTCTSVVGYCM 178
           I+LY+SF LFQLLAGK+QFGVILGWIVVSSIFLYVVFNMLAGR GNLDLHTCTSVVGYC+
Sbjct: 119 ILLYMSFCLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRTGNLDLHTCTSVVGYCL 178

Query: 179 LPVVILAAFSLFLPQGGAIRFAVSAVFVLWAARASTNLMVSLADGGEEHRGLIA 232
           LPVVI +A SLFLP  G IR +V++VFVLWA RAS  L+VSLADGG+EHRGLIA
Sbjct: 179 LPVVIFSALSLFLPVDGVIRLSVASVFVLWATRASAGLVVSLADGGDEHRGLIA 232

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449500935|ref|XP_004161234.1| PREDICTED: protein YIPF5-like [Cucumis sativus]

 Score =  339 bits (870), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 180/238 (75%), Positives = 196/238 (82%), Gaps = 10/238 (4%)

Query: 1   MTKEFSVPPVVFPSGGNPTTAGNINQRR-VPTAPFQPNRPASSAIPFMSFDIGSATPASY 59
           + KEF+VPPVVFPSGGNP    N+ QRR V TAPFQP R   S+IPFMSFDIGSA  AS 
Sbjct: 4   VKKEFAVPPVVFPSGGNP----NLQQRRGVATAPFQPPRQTGSSIPFMSFDIGSAAAAST 59

Query: 60  GGPISTSTSAGGS-----ASFDDEEPLLDELGIHPDQIWKKTKSILNPFRVNPTVHKGSD 114
                     GG      A+F+DEEPLLDELGIHPDQIWKKTKSILNPFRV P VHK SD
Sbjct: 60  SSGSIYGGPIGGGSIPGGANFEDEEPLLDELGIHPDQIWKKTKSILNPFRVKPDVHKDSD 119

Query: 115 LSGPIVLYLSFGLFQLLAGKLQFGVILGWIVVSSIFLYVVFNMLAGRNGNLDLHTCTSVV 174
           LSGPI+LY+ FGLFQLLAGK+QFGVILGWIVVSSIFLYVVFNMLAGRNGNL+LHTCTSVV
Sbjct: 120 LSGPILLYMFFGLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTSVV 179

Query: 175 GYCMLPVVILAAFSLFLPQGGAIRFAVSAVFVLWAARASTNLMVSLADGGEEHRGLIA 232
           GYCMLPVV+L+A SLFLPQ G +RFAV+ VFVLWA R  T+LMVSLADGG+EHRGLIA
Sbjct: 180 GYCMLPVVVLSAVSLFLPQAGLVRFAVAGVFVLWATRICTSLMVSLADGGDEHRGLIA 237

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15231678|ref|NP_190844.1| Yip1 integral membrane domain-containing protein [Arabidopsis thaliana] gi|7669950|emb|CAB89237.1| putative protein [Arabidopsis thaliana] gi|332645469|gb|AEE78990.1| Yip1 integral membrane domain-containing protein [Arabidopsis thaliana]

 Score =  339 bits (870), Expect = 5e-91,   Method: Compositional matrix adjust.
 Identities = 170/241 (70%), Positives = 197/241 (81%), Gaps = 9/241 (3%)

Query: 1   MTKEFSVPPVVFPSGGNPTTAGNINQRRVPTAPFQPNRP--ASSAIPFMSFDIGSATPAS 58
           MTK+F +PPVVFP+ G+     N+ QRRVPTAP+QP R   ASS+IPF+ F+IGSA  + 
Sbjct: 1   MTKDFPIPPVVFPTSGSSPATANVQQRRVPTAPYQPPRQSSASSSIPFIPFEIGSAAVSM 60

Query: 59  YGGPI------STSTSAGGSASFDDEEPLLDELGIHPDQIWKKTKSILNPFRVNPTVHKG 112
             GP       S S   G SASF+DEEPLLDELGIHPDQIWKKT+SILNPFR+N TVHK 
Sbjct: 61  PAGPFDGTIASSASFGRGVSASFEDEEPLLDELGIHPDQIWKKTRSILNPFRINQTVHKD 120

Query: 113 SDLSGPIVLYLSFGLFQLLAGKLQFGVILGWIVVSSIFLYVVFNMLAGRNGNLDLHTCTS 172
           SDLSGPI LYL+  LFQLLAGK+QFGVILGW+VVSSIFLY+VFNMLAGRNGNL+LHTCTS
Sbjct: 121 SDLSGPIFLYLALCLFQLLAGKIQFGVILGWVVVSSIFLYIVFNMLAGRNGNLNLHTCTS 180

Query: 173 VVGYCMLPVVILAAFSLFLPQG-GAIRFAVSAVFVLWAARASTNLMVSLADGGEEHRGLI 231
           +VGY +LPVVIL+A SLF+PQG G +RF + A FVLWA RA +NL+VSLADGGEEHRGLI
Sbjct: 181 LVGYSLLPVVILSAVSLFVPQGAGPVRFVLGAAFVLWATRACSNLVVSLADGGEEHRGLI 240

Query: 232 A 232
           +
Sbjct: 241 S 241

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297827109|ref|XP_002881437.1| hypothetical protein ARALYDRAFT_482602 [Arabidopsis lyrata subsp. lyrata] gi|297327276|gb|EFH57696.1| hypothetical protein ARALYDRAFT_482602 [Arabidopsis lyrata subsp. lyrata]

 Score =  338 bits (866), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 178/240 (74%), Positives = 207/240 (86%), Gaps = 9/240 (3%)

Query: 1   MTKEFSVPPVVFPSGGNPTTAGNINQRRVPTAPFQPNRPASSAIPFMSFDIGSA-----T 55
           MTK+F+VPPVVFPSGG+ +   N+ QRR P  PFQP RP+SSAIPFMSFDIGSA     T
Sbjct: 1   MTKDFAVPPVVFPSGGS-SAGPNVQQRRFPATPFQPPRPSSSAIPFMSFDIGSAAASSAT 59

Query: 56  PAS-YGGPISTSTSAGGSASF-DDEEPLLDELGIHPDQIWKKTKSILNPFRVNPTVHKGS 113
           PA  +GG I++S+S GG ++  +DEEPLLDELGIHPDQIWKKT+SILNPFR+N TVHK S
Sbjct: 60  PAGPFGGTIASSSSFGGGSASFEDEEPLLDELGIHPDQIWKKTRSILNPFRINQTVHKDS 119

Query: 114 DLSGPIVLYLSFGLFQLLAGKLQFGVILGWIVVSSIFLYVVFNMLAGRNGNLDLHTCTSV 173
           DLSGPI LYL+  LFQLLAGK+QFGVILGWIVVSSIFLYVVFNMLAGRNGNL+LHTCTS+
Sbjct: 120 DLSGPIFLYLALCLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTSL 179

Query: 174 VGYCMLPVVILAAFSLFLPQG-GAIRFAVSAVFVLWAARASTNLMVSLADGGEEHRGLIA 232
           VGYC+LPVV+L+A SLF+PQG G +RF ++AVFVLW+ RA + L+VSLADGGEEHRGLIA
Sbjct: 180 VGYCLLPVVVLSAVSLFVPQGAGPVRFVLAAVFVLWSTRACSTLVVSLADGGEEHRGLIA 239

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	234
TAIR|locus:2049450	255	AT2G36300 "AT2G36300" [Arabido	0.987	0.905	0.725	2.5e-88
TAIR|locus:2083273	257	AT3G52760 "AT3G52760" [Arabido	0.987	0.898	0.694	1e-84
MGI|MGI:1922831	254	Yipf7 "Yip1 domain family, mem	0.888	0.818	0.311	2.5e-26
UNIPROTKB|J3KR00	257	YIPF7 "Protein YIPF7" [Homo sa	0.854	0.778	0.322	9.7e-25
UNIPROTKB|Q8N8F6	280	YIPF7 "Protein YIPF7" [Homo sa	0.854	0.714	0.322	9.7e-25
GENEDB_PFALCIPARUM|PF14_0689	314	PF14_0689 "hypothetical protei	0.615	0.458	0.383	1.2e-24
UNIPROTKB|Q8IKB7	314	PF14_0689 "Yip1 protein, putat	0.615	0.458	0.383	1.2e-24
FB|FBgn0032465	264	CG12404 [Drosophila melanogast	0.799	0.708	0.331	2e-24
UNIPROTKB|F1S3T2	255	YIPF7 "Uncharacterized protein	0.867	0.796	0.309	3.3e-24
RGD|1310766	256	Yipf7 "Yip1 domain family, mem	0.871	0.796	0.313	6.8e-24

TAIR|locus:2049450 AT2G36300 "AT2G36300" [Arabidopsis thaliana (taxid:3702)]

 Score = 882 (315.5 bits), Expect = 2.5e-88, P = 2.5e-88
 Identities = 174/240 (72%), Positives = 198/240 (82%)

Query:     1 MTKEFSVPPVVFPSGGNPTTAGNINQRRVPTAPFQPNRPASSAIPFMSFDIGSA-----T 55
             MTK+F+VPPVVFPSGG+   A N+ QRR P  PFQP RP+SSAIPFMSFDIGSA     T
Sbjct:     1 MTKDFAVPPVVFPSGGSSGGA-NVQQRRFPATPFQPPRPSSSAIPFMSFDIGSAAASSAT 59

Query:    56 PAS-YGGPIXXXXXXXX-XXXFDDEEPLLDELGIHPDQIWKKTKSILNPFRVNPTVHKGS 113
             PA  +GG I            F+DEEPLLDELGIHPDQIWKKT+SILNPFR+N  VHK S
Sbjct:    60 PAGPFGGTIASSSSFGGGSASFEDEEPLLDELGIHPDQIWKKTRSILNPFRINQAVHKDS 119

Query:   114 DLSGPIVLYLSFGLFQLLAGKLQFGVILGWIVVSSIFLYVVFNMLAGRNGNLDLHTCTSV 173
             DLSGPI LYL+  LFQLLAGK+QFGVILGWIVVSSIFLYVVFNMLAGRNGNL+LHTCTS+
Sbjct:   120 DLSGPIFLYLALCLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTSL 179

Query:   174 VGYCMLPVVILAAFSLFLPQG-GAIRFAVSAVFVLWAARASTNLMVSLADGGEEHRGLIA 232
             VGYC+LPVV+L+A SLF+PQG G +RF ++A+FVLW+ RA + L+VSLADGGEEHRGLIA
Sbjct:   180 VGYCLLPVVVLSAVSLFVPQGAGPVRFVLAALFVLWSTRACSTLVVSLADGGEEHRGLIA 239

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA

GO:0016192 "vesicle-mediated transport" evidence=RCA

TAIR|locus:2083273 AT3G52760 "AT3G52760" [Arabidopsis thaliana (taxid:3702)]

 Score = 848 (303.6 bits), Expect = 1.0e-84, P = 1.0e-84
 Identities = 168/242 (69%), Positives = 194/242 (80%)

Query:     1 MTKEFSVPPVVFP-SGGNPTTAGNINQRRVPTAPFQPNRP--ASSAIPFMSFDIGSATPA 57
             MTK+F +PPVVFP SG +P TA N+ QRRVPTAP+QP R   ASS+IPF+ F+IGSA  +
Sbjct:     1 MTKDFPIPPVVFPTSGSSPATA-NVQQRRVPTAPYQPPRQSSASSSIPFIPFEIGSAAVS 59

Query:    58 SYGGPIXXXXXXXXX------XXFDDEEPLLDELGIHPDQIWKKTKSILNPFRVNPTVHK 111
                GP                  F+DEEPLLDELGIHPDQIWKKT+SILNPFR+N TVHK
Sbjct:    60 MPAGPFDGTIASSASFGRGVSASFEDEEPLLDELGIHPDQIWKKTRSILNPFRINQTVHK 119

Query:   112 GSDLSGPIVLYLSFGLFQLLAGKLQFGVILGWIVVSSIFLYVVFNMLAGRNGNLDLHTCT 171
              SDLSGPI LYL+  LFQLLAGK+QFGVILGW+VVSSIFLY+VFNMLAGRNGNL+LHTCT
Sbjct:   120 DSDLSGPIFLYLALCLFQLLAGKIQFGVILGWVVVSSIFLYIVFNMLAGRNGNLNLHTCT 179

Query:   172 SVVGYCMLPVVILAAFSLFLPQG-GAIRFAVSAVFVLWAARASTNLMVSLADGGEEHRGL 230
             S+VGY +LPVVIL+A SLF+PQG G +RF + A FVLWA RA +NL+VSLADGGEEHRGL
Sbjct:   180 SLVGYSLLPVVILSAVSLFVPQGAGPVRFVLGAAFVLWATRACSNLVVSLADGGEEHRGL 239

Query:   231 IA 232
             I+
Sbjct:   240 IS 241

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0016020 "membrane" evidence=IEA

GO:0016192 "vesicle-mediated transport" evidence=RCA

MGI|MGI:1922831 Yipf7 "Yip1 domain family, member 7" [Mus musculus (taxid:10090)]

 Score = 297 (109.6 bits), Expect = 2.5e-26, P = 2.5e-26
 Identities = 68/218 (31%), Positives = 119/218 (54%)

Query:    13 PSGGNPTTAGNINQRRVPTAPFQPNRPASSAIPFMSFDIGSAT--PASYGGPIXXXXXXX 70
             PS  +    GN+   R P A  QP+ PA   + F+  D G     PAS    +       
Sbjct:    23 PSCNDSNAYGNVYGYREPQATEQPSSPAPPEM-FLPSDYGGQLFQPASN---LDYYSQSP 78

Query:    71 XXXXFDDEEPLLDELGIHPDQIWKKTKSILNPFR-VNPTVHKGSDLSGPIVLYLSFGLFQ 129
                 FD+E PLL+ELGI+ D IW+KT ++LNP +  + ++   +DL+GPI+  ++ G   
Sbjct:    79 SVDTFDEEPPLLEELGINFDHIWQKTLTVLNPMKPADGSIMNETDLTGPILFCVALGATL 138

Query:   130 LLAGKLQFGVILGWIVVSSIFLYVVFNMLAGRNGNLDLHTCTSVVGYCMLPVVILAAFSL 189
             L+AGK QFG + G   +  + ++ + N+++  N  +      SV+GYC+LP+V+L++ ++
Sbjct:   139 LMAGKAQFGYVYGMSAIGCLGIHALLNLMS--NSGVSYGCVASVLGYCLLPMVLLSSCAV 196

Query:   190 FLPQGGAIRFAVSAVFVLWAARASTNLMVS-LADGGEE 226
             F    G I    + + + W + +++ + +S LA  G++
Sbjct:   197 FFSLQGTIGTMSALLIITWCSLSASKIFISALAMEGQQ 234

GO:0003674 "molecular_function" evidence=ND

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|J3KR00 YIPF7 "Protein YIPF7" [Homo sapiens (taxid:9606)]

 Score = 282 (104.3 bits), Expect = 9.7e-25, P = 9.7e-25
 Identities = 68/211 (32%), Positives = 111/211 (52%)

Query:    14 SGGNPTTAGNINQRRVPTAPFQPNRPASSAIPFMSFDIGSA----TPASYGGPIXXXXXX 69
             SG +    GN+   R   A  QP +PAS     M    G A     PAS           
Sbjct:    25 SGNDSNAYGNLYGSRKQQAGEQP-QPASFVPSEMLMSSGYAGQFFQPASNSD---YYSQS 80

Query:    70 XXXXXFDDEEPLLDELGIHPDQIWKKTKSILNPFR-VNPTVHKGSDLSGPIVLYLSFGLF 128
                  FD+E PLL+ELGIH D IW+KT ++LNP + V+ ++   +DL+GPI+  ++ G  
Sbjct:    81 PYIDSFDEEPPLLEELGIHFDHIWQKTLTVLNPMKPVDGSIMNETDLTGPILFCVALGAT 140

Query:   129 QLLAGKLQFGVILGWIVVSSIFLYVVFNMLAGRNGNLDLHTCTSVVGYCMLPVVILAAFS 188
              LLAGK+QFG + G   +  + ++ + N+++  +  +      SV+GYC+LP+VIL+  +
Sbjct:   141 LLLAGKVQFGYVYGMSAIGCLVIHALLNLMS--SSGVSYGCVASVLGYCLLPMVILSGCA 198

Query:   189 LFLPQGGAIRFAVSAVFVLWAARASTNLMVS 219
             +F    G      S V + W + +++ + ++
Sbjct:   199 MFFSLQGIFGIMSSLVIIGWCSLSASKIFIA 229

GO:0016020 "membrane" evidence=IEA

UNIPROTKB|Q8N8F6 YIPF7 "Protein YIPF7" [Homo sapiens (taxid:9606)]

 Score = 282 (104.3 bits), Expect = 9.7e-25, P = 9.7e-25
 Identities = 68/211 (32%), Positives = 111/211 (52%)

Query:    14 SGGNPTTAGNINQRRVPTAPFQPNRPASSAIPFMSFDIGSA----TPASYGGPIXXXXXX 69
             SG +    GN+   R   A  QP +PAS     M    G A     PAS           
Sbjct:    48 SGNDSNAYGNLYGSRKQQAGEQP-QPASFVPSEMLMSSGYAGQFFQPASNSD---YYSQS 103

Query:    70 XXXXXFDDEEPLLDELGIHPDQIWKKTKSILNPFR-VNPTVHKGSDLSGPIVLYLSFGLF 128
                  FD+E PLL+ELGIH D IW+KT ++LNP + V+ ++   +DL+GPI+  ++ G  
Sbjct:   104 PYIDSFDEEPPLLEELGIHFDHIWQKTLTVLNPMKPVDGSIMNETDLTGPILFCVALGAT 163

Query:   129 QLLAGKLQFGVILGWIVVSSIFLYVVFNMLAGRNGNLDLHTCTSVVGYCMLPVVILAAFS 188
              LLAGK+QFG + G   +  + ++ + N+++  +  +      SV+GYC+LP+VIL+  +
Sbjct:   164 LLLAGKVQFGYVYGMSAIGCLVIHALLNLMS--SSGVSYGCVASVLGYCLLPMVILSGCA 221

Query:   189 LFLPQGGAIRFAVSAVFVLWAARASTNLMVS 219
             +F    G      S V + W + +++ + ++
Sbjct:   222 MFFSLQGIFGIMSSLVIIGWCSLSASKIFIA 252

GO:0016021 "integral to membrane" evidence=IEA

GO:0005789 "endoplasmic reticulum membrane" evidence=IEA

GENEDB_PFALCIPARUM|PF14_0689 PF14_0689 "hypothetical protein" [Plasmodium falciparum (taxid:5833)]

 Score = 257 (95.5 bits), Expect = 1.2e-24, Sum P(2) = 1.2e-24
 Identities = 56/146 (38%), Positives = 93/146 (63%)

Query:    76 DDEEPLLDELGIHPDQIWKKTKSILNPFRVNPTVHKGSDLSGPIVLYLSFGLFQLLAGKL 135
             ++E PLL+ELGI+ D I K+ KS+   ++++ T+ + SDLSGP+++ LS G   LLAGK 
Sbjct:   144 EEESPLLEELGINFDLISKRMKSVFLFYKIDHTLFENSDLSGPLIIVLSLGFILLLAGKA 203

Query:   136 QFGVILGWIVVSSIFLYVVFNMLAGRNGNLDLHTCTSVVGYCMLPVVILAAFSLFLPQGG 195
              F  I    +VSS+ +Y++ NM++ +N  +DL+   S++GY +LP+VIL+  S+ +    
Sbjct:   204 SFSYIYLIGIVSSLSIYLLLNMMS-QNSTVDLYRTISMLGYALLPLVILSLISIIINLRS 262

Query:   196 AIRFAVSAVFVLWAA-RASTNLMVSL 220
                + +S   +LW+A  AS    V+L
Sbjct:   263 KKGYCISFFCILWSALTASRFFEVAL 288

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|Q8IKB7 PF14_0689 "Yip1 protein, putative" [Plasmodium falciparum 3D7 (taxid:36329)]

 Score = 257 (95.5 bits), Expect = 1.2e-24, Sum P(2) = 1.2e-24
 Identities = 56/146 (38%), Positives = 93/146 (63%)

Query:    76 DDEEPLLDELGIHPDQIWKKTKSILNPFRVNPTVHKGSDLSGPIVLYLSFGLFQLLAGKL 135
             ++E PLL+ELGI+ D I K+ KS+   ++++ T+ + SDLSGP+++ LS G   LLAGK 
Sbjct:   144 EEESPLLEELGINFDLISKRMKSVFLFYKIDHTLFENSDLSGPLIIVLSLGFILLLAGKA 203

Query:   136 QFGVILGWIVVSSIFLYVVFNMLAGRNGNLDLHTCTSVVGYCMLPVVILAAFSLFLPQGG 195
              F  I    +VSS+ +Y++ NM++ +N  +DL+   S++GY +LP+VIL+  S+ +    
Sbjct:   204 SFSYIYLIGIVSSLSIYLLLNMMS-QNSTVDLYRTISMLGYALLPLVILSLISIIINLRS 262

Query:   196 AIRFAVSAVFVLWAA-RASTNLMVSL 220
                + +S   +LW+A  AS    V+L
Sbjct:   263 KKGYCISFFCILWSALTASRFFEVAL 288

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

FB|FBgn0032465 CG12404 [Drosophila melanogaster (taxid:7227)]

 Score = 279 (103.3 bits), Expect = 2.0e-24, P = 2.0e-24
 Identities = 65/196 (33%), Positives = 106/196 (54%)

Query:    32 APFQPNRPASSAIPFMS-----FDIGSATPASYGGPIXXXXXXXXXXX--FDDEEPLLDE 84
             A   PN  AS A P        +D  + T  SYG                FDDE PLL+E
Sbjct:    42 ASVPPNYDASYAQPPSQGLGGFYDPTAYTDTSYGQDKSGKSAAGGGAGNEFDDEPPLLEE 101

Query:    85 LGIHPDQIWKKTKSILNPFR-VNPTVHKGSDLSGPIVLYLSFGLFQLLAGKLQFGVILGW 143
             LGI+P+ I++KT ++LNP R  +  + + +D++GP+V  L+ G F LL+GK+ F  I G 
Sbjct:   102 LGINPNHIFQKTLAVLNPLRGTDQQILQDTDMAGPLVFCLTLGGFLLLSGKVTFSYIYGI 161

Query:   144 IVVSSIFLYVVFNMLAGRNGNLDLHTCTSVVGYCMLPVVILAAFSLFLPQGGAIRFAVSA 203
              V+  IF Y + +++  R+  +      SV+GYC+LP+V+L+  ++ +   G +   VS 
Sbjct:   162 GVMGCIFFYCLLSLMVSRS-QVTFGAVASVLGYCLLPMVVLSGINILITIQGTLGLIVSG 220

Query:   204 VFVLWAARASTNLMVS 219
             + + W A +++ L  +
Sbjct:   221 ISIFWCAISASKLFAT 236

GO:0000139 "Golgi membrane" evidence=ISS

UNIPROTKB|F1S3T2 YIPF7 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 277 (102.6 bits), Expect = 3.3e-24, P = 3.3e-24
 Identities = 66/213 (30%), Positives = 114/213 (53%)

Query:    14 SGGNPTTAGNINQRRVPTAPFQPNRPASSAIPFMSFDIGSATPASYGGPIXX---XXXXX 70
             SG  P   GN+ + R   A  QP  P S+ IP   F I S     +  P           
Sbjct:    24 SGNEPHAYGNLYESRKQQASEQP--P-SAFIPSEMF-IPSGYSGQFLQPESNPDYYSQSS 79

Query:    71 XXXXFDDEEPLLDELGIHPDQIWKKTKSILNPFR-VNPTVHKGSDLSGPIVLYLSFGLFQ 129
                 FD+E PLL+ELGI+ D IW+KT ++LNP +  + ++   +DL+GPI+ +++ G   
Sbjct:    80 YIDSFDEEPPLLEELGINFDHIWQKTLTVLNPLKPADGSIMNETDLTGPILFFVALGTTL 139

Query:   130 LLAGKLQFGVILGWIVVSSIFLYVVFNMLAGRNGNLDLHTCTSVVGYCMLPVVILAAFSL 189
             LLAGK+QFG + G   +  + ++ + N+++  +  +      SV+GYC+LP+VIL++ ++
Sbjct:   140 LLAGKVQFGYVYGMSAIGCLGIHGLLNLMS--SSGVSYGCVASVLGYCLLPMVILSSCAI 197

Query:   190 FLPQGGAIRFAVSAVFVLWAARASTNLMVSLAD 222
             F          ++ V + W + +++ + +S  D
Sbjct:   198 FFSLQDTFGTVLALVVIGWCSLSASKIFISALD 230

GO:0016020 "membrane" evidence=IEA

RGD|1310766 Yipf7 "Yip1 domain family, member 7" [Rattus norvegicus (taxid:10116)]

 Score = 274 (101.5 bits), Expect = 6.8e-24, P = 6.8e-24
 Identities = 68/217 (31%), Positives = 116/217 (53%)

Query:    17 NPTTA-GNINQRRVPTA--PFQPNRPASSAIPFMSFDIGSAT--PASYGGPIXXXXXXXX 71
             N + A GN    R P A    QP+ P    + F+S D G     PAS    +        
Sbjct:    26 NDSNAYGNFYGSRQPQAREQCQPSSPVPPEM-FLSSDYGGQLFQPASN---LHYYSQSSS 81

Query:    72 XXXFDDEEPLLDELGIHPDQIWKKTKSILNPFR-VNPTVHKGSDLSGPIVLYLSFGLFQL 130
                FD+E PLL+ELGI+ D IW+KT ++LNP +  + ++   +DL+GPI+  ++ G   L
Sbjct:    82 VDSFDEEPPLLEELGINFDHIWQKTLTVLNPMKPADGSIMNETDLTGPILFCVALGATLL 141

Query:   131 LAGKLQFGVILGWIVVSSIFLYVVFNMLAGRNGNLDLHTCTSVVGYCMLPVVILAAFSLF 190
             +AGK QFG I G   +    ++ + N+++  +  +      SV+GYC+LP+VIL++ ++F
Sbjct:   142 MAGKAQFGYIYGMSAIGCFGIHALLNLMS--SSGVSYGCVASVLGYCLLPMVILSSCAVF 199

Query:   191 LPQGGAIRFAVSAVFVLWAARASTNLMVS-LADGGEE 226
                 G      + + + W + +++ + +S LA  G++
Sbjct:   200 FSLQGTAGTMSALLIITWCSLSASKIFISALAMEGQQ 236

GO:0016020 "membrane" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9JIM5	YIPF7_MOUSE	No assigned EC number	0.3256	0.8888	0.8188	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: eugene3.00090172 SubName- Full=Putative uncharacterized protein; (250 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	234
COG5080	227	COG5080, YIP1, Rab GTPase interacting factor, Golg	3e-23
pfam04893	171	pfam04893, Yip1, Yip1 domain	1e-04

>gnl|CDD|227412 COG5080, YIP1, Rab GTPase interacting factor, Golgi membrane protein [Intracellular trafficking and secretion]

 Score = 93.3 bits (232), Expect = 3e-23
 Identities = 44/144 (30%), Positives = 80/144 (55%), Gaps = 3/144 (2%)

Query: 78  EEPLLDELGIHPDQIWKKTKSILNPFR-VNPTVHKGSDLSGPIVLYLSFGLFQLLAGKLQ 136
           + PLL+ELGI+   I  K+  +L PF      +    DL GP++  L + LF  LAGK  
Sbjct: 58  DPPLLEELGINFGHIKSKSDDVLGPFDNKAFDILADCDLWGPLIFILLYSLFLSLAGKSH 117

Query: 137 FGVILGWIVVSSIFLYVVFNMLAGRNGNLDLHTCTSVVGYCMLPVVILAAFSLFLPQGGA 196
           FG I G  +  ++ L+++  +L  +N  +   +  S++GY +LP+V  +  S+ L +   
Sbjct: 118 FGYIYGISLFGTLSLHLLLRLLGHKN--ISFFSTISILGYSLLPLVFNSLVSIILGRILI 175

Query: 197 IRFAVSAVFVLWAARASTNLMVSL 220
           + + V A+F++W+  A++ ++ S 
Sbjct: 176 LGYVVVALFLIWSTYAASGVLKSK 199

Length = 227

>gnl|CDD|218316 pfam04893, Yip1, Yip1 domain

 Score = 40.9 bits (96), Expect = 1e-04
 Identities = 25/160 (15%), Positives = 54/160 (33%), Gaps = 30/160 (18%)

Query: 85  LGIHPDQIWKKTKSILNPFRVNPTVHKGSDLSGPIVLYLSFGLFQLLAGKLQ-------- 136
           +   P + +++ +    P            L   ++  L+  L  LLA  L         
Sbjct: 1   VLTDPSEAFRRIREEPPPR--------APWLPLLLLALLTLLLGLLLALLLGWLLGSGET 52

Query: 137 -------------FGVILGWIVVSSIFLYVVFNMLAGRNGNLDLHTCTSVVGYCMLPVVI 183
                         G  LG ++   +   ++  +     G+       S+VGY +LP+++
Sbjct: 53  IQGLTGGSALGSIIGGYLGLLLGLFLLALLLHLIAKLFGGDGSFKQTLSLVGYALLPLIL 112

Query: 184 LAAFSLFL-PQGGAIRFAVSAVFVLWAARASTNLMVSLAD 222
               +L L    GA+   V  + ++W+       + +   
Sbjct: 113 GGLIALLLSLLLGALLLLVGLLALIWSLYLLYLGLKAAHG 152

The Yip1 integral membrane domain contains four transmembrane alpha helices. The domain is characterized by the motifs DLYGP and GY. The Yip1 protein is a golgi protein involved in vesicular transport that interacts with GTPases. Length = 171

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	234
KOG3103	249	consensus Rab GTPase interacting factor, Golgi mem	100.0
COG5080	227	YIP1 Rab GTPase interacting factor, Golgi membrane	100.0
KOG2946	234	consensus Uncharacterized conserved protein [Funct	100.0
KOG3114	290	consensus Uncharacterized conserved protein [Funct	98.93
PF04893	172	Yip1: Yip1 domain; InterPro: IPR006977 This entry	98.61
PF03878	240	YIF1: YIF1; InterPro: IPR005578 This family includ	97.15
KOG3094	284	consensus Predicted membrane protein [Function unk	96.34
COG5197	284	Predicted membrane protein [Function unknown]	87.43
PF06930	170	DUF1282: Protein of unknown function (DUF1282); In	86.22

>KOG3103 consensus Rab GTPase interacting factor, Golgi membrane protein [Intracellular trafficking, secretion, and vesicular transport]

Probab=100.00  E-value=8.6e-60  Score=414.69  Aligned_cols=217  Identities=41%  Similarity=0.724  Sum_probs=192.3

Q ss_pred             CCCcccCCCCC----C-----CCCCCCCCccCCCCCCCCCCCCCCCCCccccccCCCCCC--CCCCCCCCCCCCCCCCCC
Q 026709            7 VPPVVFPSGGN----P-----TTAGNINQRRVPTAPFQPNRPASSAIPFMSFDIGSATPA--SYGGPISTSTSAGGSASF   75 (234)
Q Consensus         7 ~p~~~~~~~~~----~-----~~~~~~~~~~~p~~~~q~~~~~~~~~~~~s~~~g~~~~~--~~~~~~~~~~~~g~~~~~   75 (234)
                      .|+...|.-+|    +     .+..|.||||+|+.+.||++++     .+.+.+++++.+  .+++|++ +...-| +++
T Consensus         6 ~~~~~~~tn~~~d~s~~~q~~a~~d~~qqs~~p~~~~qP~~~~-----~g~~~~~~~a~t~~~~~~~~~-G~~a~~-~~~   78 (249)
T KOG3103|consen    6 MPPANTPTNGNYDYSGFGQPYAGFDNEQQSRVPPSYAQPPVPY-----LGQFFIPSAAATGALPAQPFG-GTIASG-NDF   78 (249)
T ss_pred             CCccccCcccccCCCCcCCcccccchhhhccCCCCccCCCcCC-----CCcccccccccccccccCCCC-Cccccc-cCC
Confidence            45566666653    1     1456789999999999999877     566888886553  2556665 333312 899


Q ss_pred             CCCcchhhhhccCHHHHHhcccceeccCc-CCCCCCCCCcchhhHHHHHHHHHHHHhhccceeeeeeehhHHHHHHHHHH
Q 026709           76 DDEEPLLDELGIHPDQIWKKTKSILNPFR-VNPTVHKGSDLSGPIVLYLSFGLFQLLAGKLQFGVILGWIVVSSIFLYVV  154 (234)
Q Consensus        76 ~~dePLleeLgiD~~~I~~Kl~~VL~P~~-~~~~il~d~DLwGPL~f~l~la~~Lll~gk~~Fg~Iygi~~~Gsi~l~~~  154 (234)
                      |||||||||||||++|||+|+++||+|+| .+.++++|.||||||+||++|+++|+++||.||||||+|+.+||+.+|++
T Consensus        79 edEpPLLEELgInf~hI~~KT~~VLnP~r~~~q~i~~d~DlaGPlvf~L~f~~flLl~gKi~FgyIygi~~~gsl~iy~L  158 (249)
T KOG3103|consen   79 EDEPPLLEELGINFDHIKQKTRAVLNPFRSADQSIMKDTDLAGPLVFCLLFGLFLLLAGKIHFGYIYGISLLGSLSIYFL  158 (249)
T ss_pred             CCCCchHHHhCCCHHHHHHHHhheecccccCceEEecCcccccchHHHHHHHHHHHhcCceEEEEEeeeHHHHHHHHHHH
Confidence            99999999999999999999999999999 55889999999999999999999999999999999999999999999999


Q ss_pred             HHHhcCCCCccceeeeeeecccchHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEec
Q 026709          155 FNMLAGRNGNLDLHTCTSVVGYCMLPVVILAAFSLFLPQGGAIRFAVSAVFVLWAARASTNLMVSLADGGEEHRGLIAL  233 (234)
Q Consensus       155 ~~LL~g~~~~Isf~q~~svLGYcLlPlvi~sli~~f~~~~~~~~~il~~~~v~WSt~aas~f~~~~~~~~~~kr~Li~Y  233 (234)
                      +|+|+.  +|++|.+|+|||||||+|+|++|.++++++..+.+|+++++++++||||+||++|+.+. ++++||.|++|
T Consensus       159 ~nlm~~--~nv~f~~~aSVlGYcLLPlvvlS~v~i~~~~~g~vg~il~~~~v~W~t~aaS~lfv~al-~~~~~rlLiaY  234 (249)
T KOG3103|consen  159 LNLMSN--KNVSFGCVASVLGYCLLPLVVLSFVNIFVGLQGTVGYILSALFVLWCTYAASKLFVSAL-SMENQRLLVAY  234 (249)
T ss_pred             HHHHhh--cCcceeeehHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHh-hccccchhhhh
Confidence            999994  46999999999999999999999999999999999999999999999999999999977 89999999998

>COG5080 YIP1 Rab GTPase interacting factor, Golgi membrane protein [Intracellular trafficking and secretion]

Probab=100.00  E-value=6.9e-46  Score=321.99  Aligned_cols=159  Identities=29%  Similarity=0.546  Sum_probs=149.9

Q ss_pred             CCCCCCCcchhhhhccCHHHHHhcccceeccCc-CCCCCCCCCcchhhHHHHHHHHHHHHhhccceeeeeeehhHHHHHH
Q 026709           72 SASFDDEEPLLDELGIHPDQIWKKTKSILNPFR-VNPTVHKGSDLSGPIVLYLSFGLFQLLAGKLQFGVILGWIVVSSIF  150 (234)
Q Consensus        72 ~~~~~~dePLleeLgiD~~~I~~Kl~~VL~P~~-~~~~il~d~DLwGPL~f~l~la~~Lll~gk~~Fg~Iygi~~~Gsi~  150 (234)
                      .|.++.|||++|||+||+.+|++|+..|+.|++ .+.++++||||||||+||+++++.|++++|.||||||++.|+|.++
T Consensus        52 ~g~~p~d~pLleel~i~F~~i~~ks~~vl~p~~~~~~~i~~d~DL~gPliF~lL~sLfLsla~~shFgyiy~islfg~ls  131 (227)
T COG5080          52 RGVYPGDPPLLEELGINFGHIKSKSDDVLGPFDNKAFDILADCDLWGPLIFILLYSLFLSLAGKSHFGYIYGISLFGTLS  131 (227)
T ss_pred             cCCCCCCccHHHHhcccccccccccceeeecccccchhhhhcccccccHHHHHHHHHHHHhcccceeehhhHHHHHHHHH
Confidence            467999999999999999999999999999987 5678999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhcCCCCccceeeeeeecccchHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEE
Q 026709          151 LYVVFNMLAGRNGNLDLHTCTSVVGYCMLPVVILAAFSLFLPQGGAIRFAVSAVFVLWAARASTNLMVSLADGGEEHRGL  230 (234)
Q Consensus       151 l~~~~~LL~g~~~~Isf~q~~svLGYcLlPlvi~sli~~f~~~~~~~~~il~~~~v~WSt~aas~f~~~~~~~~~~kr~L  230 (234)
                      +++++|||+.+  ||+|++++||+|||+||+|+.|+++.++.+......+++.+|.+||+|||+.++++.. ++++||.|
T Consensus       132 l~~~lrLl~~~--ni~f~~~~SIlGYs~lPlv~~slv~~i~~~i~i~~~vv~~l~~~Ws~~AaS~v~~~~l-~l~n~~ll  208 (227)
T COG5080         132 LHLLLRLLGHK--NISFFSTISILGYSLLPLVFNSLVSIILGRILILGYVVVALFLIWSTYAASGVLKSKL-QLSNKRLL  208 (227)
T ss_pred             HHHHHHHhccC--ceeeeehhHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhhhHHHH
Confidence            99999999955  5999999999999999999999999999986677777777799999999999999888 89999999


Q ss_pred             Eec
Q 026709          231 IAL  233 (234)
Q Consensus       231 i~Y  233 (234)
                      ++|
T Consensus       209 v~Y  211 (227)
T COG5080         209 VVY  211 (227)
T ss_pred             HHH
Confidence            988

>KOG2946 consensus Uncharacterized conserved protein [Function unknown]

Probab=100.00  E-value=1.4e-43  Score=309.56  Aligned_cols=158  Identities=21%  Similarity=0.379  Sum_probs=145.7

Q ss_pred             CCCCCCCCCcchhhhhccCHHHHHhcccceeccC---cCCCCCCCCCcchhhHHHHHHHHHHHHhhcc----ceeeeeee
Q 026709           70 GGSASFDDEEPLLDELGIHPDQIWKKTKSILNPF---RVNPTVHKGSDLSGPIVLYLSFGLFQLLAGK----LQFGVILG  142 (234)
Q Consensus        70 g~~~~~~~dePLleeLgiD~~~I~~Kl~~VL~P~---~~~~~il~d~DLwGPL~f~l~la~~Lll~gk----~~Fg~Iyg  142 (234)
                      .+++++++|||+||||+||+.+|+.|+++|++|+   +++.+++||||||||+.||+.+|++|++++.    .+|+.+|.
T Consensus        52 ~~~e~dTldePv~~tlkrD~~~I~~kl~~Vl~P~py~~dk~~~lRDwDlWGPl~~~~~la~iL~~s~~~~~~~vFs~vf~  131 (234)
T KOG2946|consen   52 EVNEEDTLDEPVLETLKRDLRAIGSKLKHVLYPHPYFEDKGQLLRDWDLWGPLFFCVFLALILSLSGSVKSASVFAVVFA  131 (234)
T ss_pred             ccCCCCcccchHHHHHHHHHHHHHhceEEEEccCCCcccccceeecccccchhHHHHHHHHHHHhhcCcccchhHHHHHH
Confidence            5789999999999999999999999999999997   4677899999999999999999999999873    48999999


Q ss_pred             hhHHHHHHHHHHHHHhcCCCCccceeeeeeecccchHHHHHHHHH-HHHhcchhhHHHHHHHHHHHHHHHHHHHHHHhhc
Q 026709          143 WIVVSSIFLYVVFNMLAGRNGNLDLHTCTSVVGYCMLPVVILAAF-SLFLPQGGAIRFAVSAVFVLWAARASTNLMVSLA  221 (234)
Q Consensus       143 i~~~Gsi~l~~~~~LL~g~~~~Isf~q~~svLGYcLlPlvi~sli-~~f~~~~~~~~~il~~~~v~WSt~aas~f~~~~~  221 (234)
                      ++|+|.+++|+|+|||||+   |+|+|++|++||||+|+++.|++ +++-.+ ..+|+++..++.+||+|+|..++....
T Consensus       132 i~wfG~~vvtln~kLLGgn---Is~fQsl~IlGYCLfPl~v~ali~~~~~~l-~~lr~vv~~~~~~WSsyaa~~~l~~~~  207 (234)
T KOG2946|consen  132 ILWFGAVVVTLNIKLLGGN---ISFFQSLCILGYCLFPLVVAALIICLFRDL-FFLRLVVTSIGLAWSSYAAMGFLSISQ  207 (234)
T ss_pred             HHHHHHHHHHHHHHHhCCc---eeEEeehhhhhhcccHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhhhhhhccc
Confidence            9999999999999999986   99999999999999999999844 555555 899999999999999999999999976


Q ss_pred             cCCCCceEEEec
Q 026709          222 DGGEEHRGLIAL  233 (234)
Q Consensus       222 ~~~~~kr~Li~Y  233 (234)
                      +  .+||.|++|
T Consensus       208 ~--~~kk~LavY  217 (234)
T KOG2946|consen  208 L--PRKKLLAVY  217 (234)
T ss_pred             c--ccccceehh
Confidence            4  689999998

>KOG3114 consensus Uncharacterized conserved protein [Function unknown]

Probab=98.93  E-value=2e-09  Score=98.56  Aligned_cols=120  Identities=15%  Similarity=0.287  Sum_probs=89.8

Q ss_pred             hccCHHHHHhcccceeccCc-CCCCCCCCCcchhhHHHHHHHHHHHHhhcc-----------c-e-----------eeee
Q 026709           85 LGIHPDQIWKKTKSILNPFR-VNPTVHKGSDLSGPIVLYLSFGLFQLLAGK-----------L-Q-----------FGVI  140 (234)
Q Consensus        85 LgiD~~~I~~Kl~~VL~P~~-~~~~il~d~DLwGPL~f~l~la~~Lll~gk-----------~-~-----------Fg~I  140 (234)
                      +++|..++++|++.+|.|.+ ...++-+++||+||+++|.++.+.+..+|.           - +           +.+|
T Consensus        84 FdVDt~qV~~Rl~~SliP~~~~~~~~~~~PDLYGPfWI~~TlVf~l~~~g~~~~~i~~~t~~g~~~g~~f~~v~saa~~i  163 (290)
T KOG3114|consen   84 FDVDTAQVRKRLKESLIPRNYVRDQIQDNPDLYGPFWITATLVFALAISGNLATFIRNGTLKGTAYGYDFGLVTSAATLI  163 (290)
T ss_pred             cCCCHHHHHHHHHHhcCCccccccccCCCccccccHHHHHHHHHHHHHcccHHHHHHhccccceeeecccchHHHHHHHH
Confidence            89999999999999999954 455677889999999999999999988742           1 2           3457


Q ss_pred             eehhHHHHHHHHHHHHHhc-CCC-CccceeeeeeecccchHHHHHHHHHHHHhcchhhHHHHHHHHHH
Q 026709          141 LGWIVVSSIFLYVVFNMLA-GRN-GNLDLHTCTSVVGYCMLPVVILAAFSLFLPQGGAIRFAVSAVFV  206 (234)
Q Consensus       141 ygi~~~Gsi~l~~~~~LL~-g~~-~~Isf~q~~svLGYcLlPlvi~sli~~f~~~~~~~~~il~~~~v  206 (234)
                      |+..|...+.++-.++..+ ++. ...+++..+|+.||+++.... .++...++. .+++.+++..+.
T Consensus       164 y~Y~~ivp~~l~~iL~~~~~~~~~~~~~l~~~~~iygysl~i~ip-~~vl~iv~~-~~~~wvl~~~~~  229 (290)
T KOG3114|consen  164 YGYLTIVPLALWGILSWNGYSLLLHCYVLLELVCIYGYSLFIFIP-LLVLWIVPS-SMVQWVLVGTAL  229 (290)
T ss_pred             HHHHHHHHHHHHHHHHhccccccccceehhhHHHHHhhHHHHHHH-HHHHHhccH-HHHHHHHHHHHH
Confidence            7888888888888887776 111 236778899999999999888 444444444 455555544433

>PF04893 Yip1: Yip1 domain; InterPro: IPR006977 This entry contains proteins belonging to the Yip1 family and represents the Yip1 domain

Probab=98.61  E-value=8.9e-08  Score=77.36  Aligned_cols=132  Identities=19%  Similarity=0.316  Sum_probs=98.3

Q ss_pred             cCHHHHHhcccceeccCcCCCCCCCCCcchhhHHHHHHHHHHHHhhcc-----------------ceee-----ee--ee
Q 026709           87 IHPDQIWKKTKSILNPFRVNPTVHKGSDLSGPIVLYLSFGLFQLLAGK-----------------LQFG-----VI--LG  142 (234)
Q Consensus        87 iD~~~I~~Kl~~VL~P~~~~~~il~d~DLwGPL~f~l~la~~Lll~gk-----------------~~Fg-----~I--yg  142 (234)
                      +|+++..+|++.-       ++..+++|++++++.++.+...+...++                 ..++     .+  ..
T Consensus         3 ~~P~~~f~~~~~~-------~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i   75 (172)
T PF04893_consen    3 FSPREFFRRLRES-------PRISKSWWLPLLLVILLTLVFGLLSSLNIPWYVDSGGSAYMFSFGSLLGSIIGGFIIILI   75 (172)
T ss_pred             cCHHHHHHHHHhc-------cccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhccchhhhhhhhHHHHHHHHHHHHHHHH
Confidence            5666666666541       1145789999999999888887777621                 1111     11  24


Q ss_pred             hhHHHHHHHHHHHHHhcCCCCccceeeeeeecccchHHHHHHHHHHHHhcc-hhhHHHHHHHHHHHHHHHHHHHHHHhhc
Q 026709          143 WIVVSSIFLYVVFNMLAGRNGNLDLHTCTSVVGYCMLPVVILAAFSLFLPQ-GGAIRFAVSAVFVLWAARASTNLMVSLA  221 (234)
Q Consensus       143 i~~~Gsi~l~~~~~LL~g~~~~Isf~q~~svLGYcLlPlvi~sli~~f~~~-~~~~~~il~~~~v~WSt~aas~f~~~~~  221 (234)
                      .+.+.+..++...|+++|+   .++.++.|+.|||.+|.++..++..+... .......+..++.+|+.+.....+.+..
T Consensus        76 ~~~i~~~~~~~~~~~~gg~---~~~~~~~~~~~ya~~P~~~~~~~~~~~~~~~~~~~~~~~~l~~iw~~~l~~~gl~~~~  152 (172)
T PF04893_consen   76 GWFILALILHLIAKLFGGK---GSFKETFSVVGYALIPLLLGSLISIILSLFFGPLSLLVIILFSIWSAYLLVIGLREVH  152 (172)
T ss_pred             HHHHHHHHHHHHHHHhCCC---CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            5566777778888999987   88999999999999999999999876654 2334566788899999999999999988


Q ss_pred             cCCCCceE
Q 026709          222 DGGEEHRG  229 (234)
Q Consensus       222 ~~~~~kr~  229 (234)
                       +++++|.
T Consensus       153 -~~~~~ka  159 (172)
T PF04893_consen  153 -RLSRGKA  159 (172)
T ss_pred             -CCChhHH
Confidence             6666664

The Yip1 integral membrane domain contains four transmembrane alpha helices. The domain is characterised by the motifs DLYGP and GY. The Yip1 protein is a golgi protein involved in vesicular transport that interacts with GTPases [].; GO: 0016020 membrane

>PF03878 YIF1: YIF1; InterPro: IPR005578 This family includes a number of eukaryotic proteins

Probab=97.15  E-value=0.0017  Score=58.52  Aligned_cols=134  Identities=18%  Similarity=0.285  Sum_probs=98.2

Q ss_pred             hhhhhccCHHHHHhcccceeccCcCC--------------CCCCCCCcchhhHHHHHHHHHHHHhh----cc-------c
Q 026709           81 LLDELGIHPDQIWKKTKSILNPFRVN--------------PTVHKGSDLSGPIVLYLSFGLFQLLA----GK-------L  135 (234)
Q Consensus        81 LleeLgiD~~~I~~Kl~~VL~P~~~~--------------~~il~d~DLwGPL~f~l~la~~Lll~----gk-------~  135 (234)
                      +--=+.+|-.=|.+|++-++.|+...              ++.++.+||.=|++-++++-++-.+.    |+       .
T Consensus        39 lk~YF~V~n~YV~~KL~lllfPf~~k~W~r~~~~~~~~~Pr~DvNAPDLYIPlMa~vTYiLl~g~~~G~~g~F~Pe~Lg~  118 (240)
T PF03878_consen   39 LKYYFAVDNSYVLKKLKLLLFPFLHKDWSRKYEQESYLPPREDVNAPDLYIPLMAFVTYILLSGLILGLQGRFSPELLGI  118 (240)
T ss_pred             ceeeEECCHHHHHHHHHHeecccccCCccccccccCCCCchhhccCcccccchHHHHHHHHHHHHHHHhcCCCCHHHHHH
Confidence            33447899999999999999996511              34677899999999888887665443    33       2


Q ss_pred             eeeeeeehhHHHHHHHHHHHHHhcCCCCccceeeeeeecccchHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHH
Q 026709          136 QFGVILGWIVVSSIFLYVVFNMLAGRNGNLDLHTCTSVVGYCMLPVVILAAFSLFLPQGGAIRFAVSAVFVLWAARASTN  215 (234)
Q Consensus       136 ~Fg~Iygi~~~Gsi~l~~~~~LL~g~~~~Isf~q~~svLGYcLlPlvi~sli~~f~~~~~~~~~il~~~~v~WSt~aas~  215 (234)
                      .++...+++.+=.+++.+.+.+|+.+ .++++.-.+|..||-..++++..++.++...  +.    --+..+|.+.|..-
T Consensus       119 ~~s~al~~~~lEv~i~k~~~y~l~~~-~~~~~lDlvay~GYKfv~ii~~~l~~~l~~~--~~----yy~~~ly~~~a~~~  191 (240)
T PF03878_consen  119 QASSALVWWFLEVLIIKLGLYLLNIS-SSLPILDLVAYSGYKFVGIILTLLASLLFGS--WV----YYIALLYTSFANAF  191 (240)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCC-CCCCHHHHHHhhcchHHHHHHHHHHHHHccc--HH----HHHHHHHHHHHHHH
Confidence            34455666666667777888888763 3599999999999999999888777766532  22    23467888888887


Q ss_pred             HHHhhc
Q 026709          216 LMVSLA  221 (234)
Q Consensus       216 f~~~~~  221 (234)
                      |+.+.+
T Consensus       192 Fl~RsL  197 (240)
T PF03878_consen  192 FLLRSL  197 (240)
T ss_pred             HHHHHH
Confidence            777654

It is an integral membrane protein, conserved in at least 1 copy in all sequenced eukaryotes. The gene name in Schizosaccharomyces pombe (Fission yeast) is hrf1+ for Heavy metal Resistance Factor 1.

>KOG3094 consensus Predicted membrane protein [Function unknown]

Probab=96.34  E-value=0.049  Score=49.98  Aligned_cols=142  Identities=16%  Similarity=0.190  Sum_probs=88.3

Q ss_pred             CCCCCcchhhhhccCHHHHHhcccceeccCcC--------------CCCCCCCCcchhhHHHHHHHHHHHHh----hcc-
Q 026709           74 SFDDEEPLLDELGIHPDQIWKKTKSILNPFRV--------------NPTVHKGSDLSGPIVLYLSFGLFQLL----AGK-  134 (234)
Q Consensus        74 ~~~~dePLleeLgiD~~~I~~Kl~~VL~P~~~--------------~~~il~d~DLwGPL~f~l~la~~Lll----~gk-  134 (234)
                      .+-.++-+--=+.+|-.=+.+|++-++.|+..              .++.++.+||.=|++-.+++-++.-+    .|+ 
T Consensus        79 k~~~~~~l~yYF~Vdn~YV~~KL~lilfPf~hk~W~~~~~~~~~~PPr~DvNaPDLYiP~MafiTYIll~gl~lGlqg~F  158 (284)
T KOG3094|consen   79 KYVSVPKLKYYFAVDNAYVGKKLKLILFPFLHKDWTRIYERESPLPPRYDVNAPDLYIPLMAFITYILLAGLLLGLQGRF  158 (284)
T ss_pred             hhccCccceEEEEechHHHhhhheEEEeeecCcchhhhhcccCCCCccccCCCcchhhhHHHHHHHHHHHHHHhhhccCC
Confidence            33334444444778999999999999999651              12468889999999877776554333    333 


Q ss_pred             --ceeeeeeeh---hHHHHHHHHHHHHHhcCCCCccceeeeeeecccchHHHHHHHHHHHHhcchhhHHHHHHHHHHHHH
Q 026709          135 --LQFGVILGW---IVVSSIFLYVVFNMLAGRNGNLDLHTCTSVVGYCMLPVVILAAFSLFLPQGGAIRFAVSAVFVLWA  209 (234)
Q Consensus       135 --~~Fg~Iygi---~~~Gsi~l~~~~~LL~g~~~~Isf~q~~svLGYcLlPlvi~sli~~f~~~~~~~~~il~~~~v~WS  209 (234)
                        ..+++.+.=   +|+-.++++.+...+-+.+...+....+|--||-..+++++.+..++.--   .+   -.+...|-
T Consensus       159 sPE~Lg~~~s~al~~v~le~l~l~l~lY~l~vs~~ls~ldllAysGYKfv~liL~~L~k~~~~~---~~---yyi~~~yt  232 (284)
T KOG3094|consen  159 SPEALGILASKALAWVILEVLLLKLGLYLLNVSSSLSTLDLLAYSGYKFVGLILAQLTKLLFGP---YG---YYIALAYT  232 (284)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHheecccCCcchhHhhhhcccchHHHHHHHHhhheecc---hh---HHHHHHHH
Confidence              234443322   22333333333333322223588899999999999999999888754421   12   23346677


Q ss_pred             HHHHHHHHHhhc
Q 026709          210 ARASTNLMVSLA  221 (234)
Q Consensus       210 t~aas~f~~~~~  221 (234)
                      +.|-.-|+.+.+
T Consensus       233 ~~a~gvFLlRSl  244 (284)
T KOG3094|consen  233 YLAFGVFLLRSL  244 (284)
T ss_pred             HHHHHHHHHHHH
Confidence            777666777665

>COG5197 Predicted membrane protein [Function unknown]

Probab=87.43  E-value=8.3  Score=35.17  Aligned_cols=112  Identities=16%  Similarity=0.193  Sum_probs=73.8

Q ss_pred             CcchhhhhccCHHHHHhcccceeccCcC-------C-------CCCCCCCcchhhHHHHHHHHHHHHhh-c-c-----ce
Q 026709           78 EEPLLDELGIHPDQIWKKTKSILNPFRV-------N-------PTVHKGSDLSGPIVLYLSFGLFQLLA-G-K-----LQ  136 (234)
Q Consensus        78 dePLleeLgiD~~~I~~Kl~~VL~P~~~-------~-------~~il~d~DLwGPL~f~l~la~~Lll~-g-k-----~~  136 (234)
                      -.++-.-+.+|-+-+.+|++-+|.|++.       |       ++.++.+|+.=|++=..++-++.-.- | |     ..
T Consensus        80 ~~~~~tYF~V~n~yVi~KL~LIlfPf~nk~W~r~gd~eg~~pp~~d~nsPdmY~P~M~fvtyILl~~~~~GL~g~F~PE~  159 (284)
T COG5197          80 SQQISTYFQVSNRYVINKLKLILFPFLNKNWQRIGDSEGFLPPRDDVNSPDMYMPIMGFVTYILLWNTQQGLKGSFNPED  159 (284)
T ss_pred             ccceeEEEEechHhHHhhhheEEeecccchhhhccCCCCCCCchhhcCCccccchHHHHHHHHHHHHHHhhcccCCCHHH
Confidence            3455555788999999999999999761       2       24588899999999888776654432 2 2     45


Q ss_pred             eeeeeehhHHHHHHHHHHHHHhcCC----CCccceeeeeeecccchHHHHHHHHHHHH
Q 026709          137 FGVILGWIVVSSIFLYVVFNMLAGR----NGNLDLHTCTSVVGYCMLPVVILAAFSLF  190 (234)
Q Consensus       137 Fg~Iygi~~~Gsi~l~~~~~LL~g~----~~~Isf~q~~svLGYcLlPlvi~sli~~f  190 (234)
                      ||+.+.-...--.+-.+..+ +|+-    +..-+|...+|.-||=..|++++.+.-.+
T Consensus       160 lg~~~s~~~a~v~v~~l~tr-lg~Yll~~s~~~~~ldllaysGYKfV~liL~qL~k~~  216 (284)
T COG5197         160 LGYKLSSTLAFVCVDLLITR-LGLYLLIDSKIPSFLDLLAYSGYKFVPLILAQLLKNV  216 (284)
T ss_pred             hhHHHHHHHHHHHHHHHHHH-hceEEEeecccchhhhhhhhcccccHHHHHHHHhhhc
Confidence            66654433322222233333 3431    11244778899999999999999887644

>PF06930 DUF1282: Protein of unknown function (DUF1282); InterPro: IPR009698 This entry represents several hypothetical proteins of around 200 residues in length

Probab=86.22  E-value=1  Score=37.72  Aligned_cols=72  Identities=13%  Similarity=0.224  Sum_probs=48.4

Q ss_pred             HHHHHHhcCCCCccceeeeeeecccchHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHhhccCC-CCceE
Q 026709          152 YVVFNMLAGRNGNLDLHTCTSVVGYCMLPVVILAAFSLFLPQGGAIRFAVSAVFVLWAARASTNLMVSLADGG-EEHRG  229 (234)
Q Consensus       152 ~~~~~LL~g~~~~Isf~q~~svLGYcLlPlvi~sli~~f~~~~~~~~~il~~~~v~WSt~aas~f~~~~~~~~-~~kr~  229 (234)
                      +...+-.+++   -++-++.-..+|...|+.+..+++.....  +.......++.+|+.+--.--..... +. |++|.
T Consensus        84 ~~~~~~~~~~---~s~~~~~~~a~y~~tPl~L~~i~~~~~~~--~l~~~~~~~~~~~~~~Lly~Gv~~~~-~i~~~~~~  156 (170)
T PF06930_consen   84 HWMMKTFGGR---PSYKKCLAFAAYAATPLFLGGIVNLYPSL--WLTLLVGLIALIYSVYLLYLGVPIFM-NISEKERA  156 (170)
T ss_pred             HHHHHHcCCC---CCHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHh-CcCcccch
Confidence            4444444444   77889999999999999999988877653  44445566667777766555555555 45 33443

The function of is unknown although a number of the members are thought to be putative membrane proteins.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00