Citrus Sinensis ID: 027002

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------23
Protein Sequence
MDESYNNLPSSHLLGSVPAVVSEEKHATSYEAPEATMQTFPPGNGGGSRPGYQSLGSSSEGFEQQPANNWKGFFSISSYTQYFNVDTDIVINRLFSSLHPLSGDFFSKIDANPDLFVNVAACTVYGYAIVVPLAYYFLLQYMGSSASLVRFWCLWGYSLFIFVVTSFLLLIPIELLRWIIILLAGTTSSCFVAFNLKSYMEGNDLTVLVVASFCLQMALAIFIKVWFFP
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEcccccccccHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccEEEHHHHHHHHHHHHHHHHHHHccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEEcEcccccHHHHHHHHHHHccccccccEEEccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHcHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHcc
Coil and Loop (DISEMBL)
mdesynnlpsshllgsvpavvseekhatsyeapeatmqtfppgngggsrpgyqslgsssegfeqqpannwkgffsissytqyfnvdtdIVINRLfsslhplsgdffskidanpdlfVNVAACTVYGYAIVVPLAYYFLLQYMGSSASLVRFWCLWGYSLFIFVVTSFLLLIPIELLRWIIILLAGTTSSCFVAFNlksymegndLTVLVVASFCLQMALAIFIKVWFFP
Flexible Loop (DISEMBL)
mdesynnlpsshllgSVPAVVSEEKHATSYEAPEATMQTFPPGNGGGSRPGYQSLGSSSEGFEQQPANNWKGFFSISSYTQYFNVDTDIVINRLFSSLHPLSGDFFSKIDANPDLFVNVAACTVYGYAIVVPLAYYFLLQYMGSSASLVRFWCLWGYSLFIFVVTSFLLLIPIELLRWIIILLAGTTSSCFVAFNLKSYMEGNDLTVLVVASFCLQMALAIFIKVWFFP
Low Complexity Region (SEG)
MDESYNNLPSSHLLGSVPAVVSEEKHATSYEAPEATMQTFPPGNGGGSRPGYQSLGSSSEGFEQQPANNWKGFFSISSYTQYFNVDTDIVINRLFSSLHPLSGDFFSKIDANPDLFVNVAACTVYGYAIVVPLAYYFLLQYMGSSASLVRFWCLWGYSLFIFVVTSFLLLIPIELLRWIIILLAGTTSSCFVAFNLKSYMEGNDLTVLVVASFCLQMALAIFIKVWFFP
Disordered region (IsUnstruct)
********************************************************************NWKGFFSISSYTQYFNVDTDIVINRLFSSLHPLSGDFFSKIDANPDLFVNVAACTVYGYAIVVPLAYYFLLQYMGSSASLVRFWCLWGYSLFIFVVTSFLLLIPIELLRWIIILLAGTTSSCFVAFNLKSYMEGNDLTVLVVASFCLQMALAIFIKVWFF*
Disordered Region (DISOPRED)
******N***SHLLGSVPAVVSEE************************************************FFSISSYTQYFNVDTDIVINRLFSSLHPLSGDFFSKIDANPDLFVNVAACTVYGYAIVVPLAYYFLLQYMGSSASLVRFWCLWGYSLFIFVVTSFLLLIPIELLRWIIILLAGTTSSCFVAFNLKSYMEGNDLTVLVVASFCLQMALAIFIKVWFFP
Disordered Region (DISEMBL)
**********SHLLGSVPAVVSEEKHATSYEAPEATMQTFPPGNGGGSRPGYQ**********QQPANNWKGFFSISSYTQYFNVDTDIVINRLFSSLHPLSGDFFSKIDANPDLFVNVAACTVYGYAIVVPLAYYFLLQYMGSSASLVRFWCLWGYSLFIFVVTSFLLLIPIELLRWIIILLAGTTSSCFVAFNLKSYMEGNDLTVLVVASFCLQMALAIFIKVWFFP
Disordered Region (DISPRO)
*********************************************************************WKGFFSISSYTQYFNVDTDIVINRLFSSLHPLSGDFFSKIDANPDLFVNVAACTVYGYAIVVPLAYYFLLQYMGSSASLVRFWCLWGYSLFIFVVTSFLLLIPIELLRWIIILLAGTTSSCFVAFNLKSYMEGNDLTVLVVASFCLQMALAIFIKVWFFP
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHi
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHHHHHiiiiHHHHHHHHHHHHHHHHHHHHHHHHooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MDESYNNLPSSHLLGSVPAVVSEEKHATSYEAPEATMQTFPPGNGGGSRPGYQSLGSSSEGFEQQPANNWKGFFSISSYTQYFNVDTDIVINRLFSSLHPLSGDFFSKIDANPDLFVNVAACTVYGYAIVVPLAYYFLLQYMGSSASLVRFWCLWGYSLFIFVVTSFLLLIPIELLRWIIILLAGTTSSCFVAFNLKSYMEGNDLTVLVVASFCLQMALAIFIKVWFFP
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	229	2.2.26 [Sep-21-2011]
Q54TS4	347	Protein YIPF1 homolog OS=	yes	no	0.733	0.484	0.288	4e-17
Q5RBL0	306	Protein YIPF1 OS=Pongo ab	yes	no	0.807	0.604	0.274	2e-13
Q9Y548	306	Protein YIPF1 OS=Homo sap	yes	no	0.864	0.647	0.270	4e-13
Q91VU1	306	Protein YIPF1 OS=Mus musc	yes	no	0.829	0.620	0.267	1e-12
Q6P6G5	306	Protein YIPF1 OS=Rattus n	yes	no	0.829	0.620	0.267	4e-12
Q99LP8	312	Protein YIPF2 OS=Mus musc	no	no	0.855	0.628	0.249	3e-10
Q9BWQ6	316	Protein YIPF2 OS=Homo sap	no	no	0.541	0.392	0.289	2e-08
Q5XIT3	311	Protein YIPF2 OS=Rattus n	no	no	0.707	0.520	0.252	2e-08

>sp|Q54TS4|YIPF1_DICDI Protein YIPF1 homolog OS=Dictyostelium discoideum GN=yipf1 PE=3 SV=1

 Score = 88.2 bits (217), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 62/215 (28%), Positives = 101/215 (46%), Gaps = 47/215 (21%)

Query: 55  LGSSSEGFEQQPANNWKGFFSISSYTQYFNVDTDIVINRLFSSLHPLSGDFFSKIDANPD 114
           L ++ +G E++ +     F+ +  Y   FNVDT  V  RL  S+ P+   FF+ I  NPD
Sbjct: 112 LNTNEDGTEKKYS-----FYEVPYYRFLFNVDTKEVGLRLIRSMLPIKFSFFNLIRENPD 166

Query: 115 LF-------------------------------------VNVAACTVYGYAIVVPLAYYF 137
           L+                                     +  +A T+YGY+ V+PL  + 
Sbjct: 167 LYGPFWVLTSLVFIVAVTSNLNEYFHSSDHKSWEVDIQKIVYSAITIYGYSFVIPLILWG 226

Query: 138 LLQYMGSSASLVRFWCLWGYSLFIFVVTSFLLLIPIELLRWIIILLAGTTSSCFVAFN-- 195
           + ++M     L+   C++GY+LFIFV  S L +IP++L++WII+ +A   S  F+  N  
Sbjct: 227 IFKWMNLGLRLLDMLCIYGYTLFIFVPASILCVIPLQLVQWIIVAIASIVSGLFLVTNIF 286

Query: 196 --LKSYMEGNDLTVLVVASFCLQMALAIFIKVWFF 228
             LK       L +  V    L + LA+ +K++FF
Sbjct: 287 TPLKEDFTKRGLIICAVIG-ALHIGLALVLKLYFF 320

Dictyostelium discoideum (taxid: 44689)

>sp|Q5RBL0|YIPF1_PONAB Protein YIPF1 OS=Pongo abelii GN=YIPF1 PE=2 SV=1

 Score = 76.3 bits (186), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 65/237 (27%), Positives = 103/237 (43%), Gaps = 52/237 (21%)

Query: 44  NGGGSRPGYQSLGSSSEGFEQQPANNWKG--FFSISSYTQYFNVDTDIVINRLFSSLHPL 101
            G G     + LG+      +  A   K   F++   Y  +F+VDT  V +R+  SL P+
Sbjct: 45  RGSGREEDDELLGNDDSDKTELLAGQKKSSPFWTFEYYQTFFDVDTYQVFDRIKGSLLPI 104

Query: 102 SGDFFSK--IDANPDLF---------------------------------------VNVA 120
            G  F +  I +NPDL+                                       V++A
Sbjct: 105 PGKNFVRLYIRSNPDLYGPFWICATLVFAIAISGNLSNFLIHLGEKTYRYVPEFRKVSIA 164

Query: 121 ACTVYGYAIVVPLAYYFLLQYMGS------SASLVRFWCLWGYSLFIFVVTSFLLLIPIE 174
           A T+Y YA +VPLA +  L +  S      S S +   C++GYSLFI++ T+ L +IP +
Sbjct: 165 ATTIYAYAWLVPLALWGFLMWRNSKVMNIVSYSFLEIVCVYGYSLFIYIPTAILWIIPQK 224

Query: 175 LLRWIIILLA-GTTSSCFVAFNLKSYMEGNDLTVL--VVASFCLQMALAIFIKVWFF 228
            +RWI++++A G + S        +  E N    L  +V    L M L++    +FF
Sbjct: 225 AVRWILVMIALGISGSVLAMTFWPAVREDNRRVALATIVTIVLLHMLLSVGCLAYFF 281

Pongo abelii (taxid: 9601)

>sp|Q9Y548|YIPF1_HUMAN Protein YIPF1 OS=Homo sapiens GN=YIPF1 PE=2 SV=1

 Score = 74.7 bits (182), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 68/251 (27%), Positives = 107/251 (42%), Gaps = 53/251 (21%)

Query: 31  EAPEATMQTFPPG-NGGGSRPGYQSLGSSSEGFEQQPANNWKG--FFSISSYTQYFNVDT 87
           E P  T +  P    G G     + LG+      +  A   K   F++   Y  +F+VDT
Sbjct: 31  EDPGETPKHQPGSPRGSGREEDDELLGNDDSDKTELLAGQKKSSPFWTFEYYQTFFDVDT 90

Query: 88  DIVINRLFSSLHPLSGDFFSK--IDANPDLF----------------------------- 116
             V +R+  SL P+ G  F +  I +NPDL+                             
Sbjct: 91  YQVFDRIKGSLLPIPGKNFVRLYIRSNPDLYGPFWICATLVFAIAISGNLSNFLIHLGEK 150

Query: 117 ----------VNVAACTVYGYAIVVPLAYYFLLQYMGS------SASLVRFWCLWGYSLF 160
                     V++AA  +Y YA +VPLA +  L +  S      S S +   C++GYSLF
Sbjct: 151 TYHYVPEFRKVSIAATIIYAYAWLVPLALWGFLMWRNSKVMNIVSYSFLEIVCVYGYSLF 210

Query: 161 IFVVTSFLLLIPIELLRWIIILLAGTTSSCFVAFNL-KSYMEGNDLTVL--VVASFCLQM 217
           I++ T+ L +IP + +RWI++++A   S   +A     +  E N    L  +V    L M
Sbjct: 211 IYIPTAILWIIPQKAVRWILVMIALGISGSLLAMTFWPAVREDNRRVALATIVTIVLLHM 270

Query: 218 ALAIFIKVWFF 228
            L++    +FF
Sbjct: 271 LLSVGCLAYFF 281

Homo sapiens (taxid: 9606)

>sp|Q91VU1|YIPF1_MOUSE Protein YIPF1 OS=Mus musculus GN=Yipf1 PE=2 SV=1

 Score = 73.2 bits (178), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 65/243 (26%), Positives = 108/243 (44%), Gaps = 53/243 (21%)

Query: 38  QTFPPGNGGGSRPGYQSLGSSSEGFEQQPANNWKG--FFSISSYTQYFNVDTDIVINRLF 95
           Q  PPG+ G      + LG++     +  A   +   F++   Y  +F+VDT  V +R+ 
Sbjct: 40  QPRPPGSVGREE-DEELLGNNDSDETELLAGQKRSSPFWTFEYYQTFFDVDTYQVFDRIK 98

Query: 96  SSLHPLSGDFFSK--IDANPDLF------------------------------------- 116
            SL P+ G  F +  I +NPDL+                                     
Sbjct: 99  GSLLPVPGKNFVRLYIRSNPDLYGPFWICATLVFAIAISGNLSNFLIHLGEKTYHYVPEF 158

Query: 117 --VNVAACTVYGYAIVVPLAYYFLLQYMGS------SASLVRFWCLWGYSLFIFVVTSFL 168
             V++AA  +Y YA +VPLA +  L +  S      S S +   C++GYSLFI++ T+ L
Sbjct: 159 QKVSIAATVIYAYAWLVPLALWGFLLWRNSKVMSMVSYSFLEIVCVYGYSLFIYIPTAVL 218

Query: 169 LLIPIELLRWIIILLA-GTTSSCFVAFNLKSYMEGNDLTVL--VVASFCLQMALAIFIKV 225
            +IP  ++RW+++++A G + S  V     +  E N    L  +V    L + L++    
Sbjct: 219 WIIPQRVVRWVLVMIALGVSGSVLVMTFWPAVREDNRRVALATIVTIVLLHVLLSVGCLA 278

Query: 226 WFF 228
           +FF
Sbjct: 279 YFF 281

Mus musculus (taxid: 10090)

>sp|Q6P6G5|YIPF1_RAT Protein YIPF1 OS=Rattus norvegicus GN=Yipf1 PE=2 SV=1

 Score = 72.0 bits (175), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 65/243 (26%), Positives = 106/243 (43%), Gaps = 53/243 (21%)

Query: 38  QTFPPGNGGGSRPGYQSLGSSSEGFEQQPANNWKG--FFSISSYTQYFNVDTDIVINRLF 95
           Q  PPG+ G      + LG++     +  A   K   F++   Y  +F+VDT  V +R+ 
Sbjct: 40  QPRPPGSLGREE-DEELLGTNDSDETELLAGQKKSSPFWTFEYYQTFFDVDTYQVFDRIK 98

Query: 96  SSLHPLSGDFFSK--IDANPDLF------------------------------------- 116
            SL P+ G  F +  I +NPDL+                                     
Sbjct: 99  GSLLPVPGKNFVRLYIRSNPDLYGPFWICATLVFAIAISGNLSNFLIHLGEKTYHYVPEF 158

Query: 117 --VNVAACTVYGYAIVVPLAYYFLLQYMGS------SASLVRFWCLWGYSLFIFVVTSFL 168
             V++AA  +Y YA +VPLA +  L +  S      S S +   C++GYSLFI++ T+ L
Sbjct: 159 QKVSIAATVIYAYAWLVPLALWGFLLWRNSKVMNIVSYSFLEIVCVYGYSLFIYIPTAVL 218

Query: 169 LLIPIELLRWIIILLA-GTTSSCFVAFNLKSYMEGNDLTVL--VVASFCLQMALAIFIKV 225
            +IP  ++RW+++ +A G + S        +  E N    L  +V    L + L++    
Sbjct: 219 WIIPQRVIRWVLVTIALGISGSVLAMTFWPAVREDNRRVALATIVTIMLLHVLLSVGCLA 278

Query: 226 WFF 228
           +FF
Sbjct: 279 YFF 281

Rattus norvegicus (taxid: 10116)

>sp|Q99LP8|YIPF2_MOUSE Protein YIPF2 OS=Mus musculus GN=Yipf2 PE=2 SV=1

 Score = 65.9 bits (159), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 63/253 (24%), Positives = 107/253 (42%), Gaps = 57/253 (22%)

Query: 10  SSHLLGSVP--AVVSEEKHATSYEAPEATMQTFPPGNGGGSRPGYQSLGSSSEGFEQQPA 67
           +++LL   P  A  S+    TS E     + +   G G G+  G +    +S   E++P 
Sbjct: 15  ATNLLAETPDAATTSQSDELTSREHVAVVVGS---GIGYGAEVGEEEDDKTSLLQEEKPQ 71

Query: 68  NNWKGFFSISSYTQYFNVDTDIVINRLFSSLHPLSGDFFSK--IDANPDLF--------- 116
                F++   Y  +F+VDT  V++R+  SL P  G  F +  +   PDL+         
Sbjct: 72  PR---FWTFDYYQSFFDVDTSQVLDRIKGSLLPHPGHNFVRHHLRNRPDLYGPFWICATL 128

Query: 117 ------------------------------VNVAACTVYGYAIVVPLAYYFLLQYMGSSA 146
                                         V +A  T+Y YA +VPLA +  L++   + 
Sbjct: 129 AFVLAVTGNLTLVLAQRRDPSIHYSPQFHKVTIAGITIYCYAWLVPLALWGFLRWRQGTR 188

Query: 147 SLVRFW------CLWGYSLFIFVVTSFLLLIPIELLRWIIILLAGTTSSCFVAFNLKSYM 200
             +  +      C++GYSLF+F+ T  L LIP++ ++W+   L    S+  + F L   +
Sbjct: 189 ERMGLYTFLETVCVYGYSLFVFIPTVVLWLIPVQWIQWLFGALGLALSAAGLVFTLWPVV 248

Query: 201 EGNDLTVLVVASF 213
             +  T LV A+ 
Sbjct: 249 RED--TRLVAAAL 259

Mus musculus (taxid: 10090)

>sp|Q9BWQ6|YIPF2_HUMAN Protein YIPF2 OS=Homo sapiens GN=YIPF2 PE=2 SV=1

 Score = 59.7 bits (143), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 50/173 (28%), Positives = 75/173 (43%), Gaps = 49/173 (28%)

Query: 72  GFFSISSYTQYFNVDTDIVINRLFSSLHPLSGDFFSK--IDANPDLF------------- 116
           GF++ S Y  +F+VDT  V++R+  SL P  G  F +  +   PDL+             
Sbjct: 76  GFWTFSYYQSFFDVDTSQVLDRIKGSLLPRPGHNFVRHHLRNRPDLYGPFWICATLAFVL 135

Query: 117 --------------------------VNVAACTVYGYAIVVPLAYYFLLQY-------MG 143
                                     V VA  ++Y YA +VPLA +  L++       MG
Sbjct: 136 AVTGNLTLVLAQRRDPSIHYSPQFHKVTVAGISIYCYAWLVPLALWGFLRWRKGVQERMG 195

Query: 144 SSASLVRFWCLWGYSLFIFVVTSFLLLIPIELLRWIIILLAGTTSSCFVAFNL 196
               L    C++GYSLF+F+    L LIP+  L+W+   LA   S+  + F L
Sbjct: 196 PYTFLETV-CIYGYSLFVFIPMVVLWLIPVPWLQWLFGALALGLSAAGLVFTL 247

Homo sapiens (taxid: 9606)

>sp|Q5XIT3|YIPF2_RAT Protein YIPF2 OS=Rattus norvegicus GN=Yipf2 PE=2 SV=1

 Score = 59.3 bits (142), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 55/218 (25%), Positives = 93/218 (42%), Gaps = 56/218 (25%)

Query: 10  SSHLLGSVP--AVVSEEKHATSYEAPEATMQTFPPGNGGGSRPGYQSLGSSSEGFEQQPA 67
           +++LL   P  A  S+    TS E     + +   G G G+  G +    +S   +++P 
Sbjct: 15  AANLLAETPDAATTSQSDKLTSQEHVAVVVGS---GIGYGAE-GEEEDDKTSLLQDEKPQ 70

Query: 68  NNWKGFFSISSYTQYFNVDTDIVINRLFSSLHPLSGDFFSK--IDANPDLF--------- 116
                F++   Y  +F+VDT  V++R+  SL P  G  F +  +   PDL+         
Sbjct: 71  PR---FWTFDYYQSFFDVDTSQVLDRIKGSLLPHPGHNFVRHHLRNRPDLYGPFWICATL 127

Query: 117 ------------------------------VNVAACTVYGYAIVVPLAYYFLLQYMGSSA 146
                                         V +A  T+Y YA +VPLA +  L++   + 
Sbjct: 128 AFVLAVTGNLTLVLAQRRDPSIHYSPQFHKVTIAGITIYCYAWLVPLALWGFLRWRQGTR 187

Query: 147 SLVRFW------CLWGYSLFIFVVTSFLLLIPIELLRW 178
             +  +      C++GYSLF+F+ T  L LIP++ L+W
Sbjct: 188 ERMGLYTFLETVCVYGYSLFVFIPTVVLWLIPVQWLQW 225

Rattus norvegicus (taxid: 10116)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	229
356501093	270	PREDICTED: protein YIPF1 homolog [Glycin	0.995	0.844	0.604	4e-90
359807651	270	uncharacterized protein LOC100813483 [Gl	0.995	0.844	0.604	6e-90
359486763	270	PREDICTED: protein YIPF1 homolog [Vitis	1.0	0.848	0.603	3e-89
296086170	269	unnamed protein product [Vitis vinifera]	1.0	0.851	0.598	5e-89
255566494	271	Protein YIPF1, putative [Ricinus communi	0.995	0.841	0.611	8e-88
449441358	270	PREDICTED: protein YIPF1 homolog [Cucumi	0.995	0.844	0.597	7e-87
449495287	270	PREDICTED: LOW QUALITY PROTEIN: protein	0.995	0.844	0.597	1e-86
224109456	271	predicted protein [Populus trichocarpa]	0.991	0.837	0.616	2e-84
30688039	275	Integral membrane Yip1 family protein [A	0.995	0.829	0.572	3e-81
388505556	275	unknown [Lotus japonicus]	0.991	0.825	0.558	4e-81

>gi|356501093|ref|XP_003519363.1| PREDICTED: protein YIPF1 homolog [Glycine max]

 Score =  336 bits (862), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 162/268 (60%), Positives = 199/268 (74%), Gaps = 40/268 (14%)

Query: 2   DESYNNLPSSHLLGSVPAVVSEEKHATSYEAPEATMQTFPPGNGGGSRPGYQSLGSSSEG 61
           + SY  LP+SHLLGSVPAV++EE +AT + A  A MQTFPP NGG   PG+Q+LGS +E 
Sbjct: 3   ESSYTGLPTSHLLGSVPAVITEENNATKHVATGANMQTFPPNNGGDRGPGHQTLGSPTEA 62

Query: 62  FEQQPANNWKGFFSISSYTQYFNVDTDIVINRLFSSLHPLSGDFFSKIDANPDLF----- 116
           FEQQPANNW+G FS+SSY++YFNVDTD+V+ RL SSL+P++ DFFSKIDANPDL+     
Sbjct: 63  FEQQPANNWRGIFSMSSYSEYFNVDTDVVLIRLISSLNPVAADFFSKIDANPDLYGLIWI 122

Query: 117 -----------------------------------VNVAACTVYGYAIVVPLAYYFLLQY 141
                                              VNVAAC++YGYAIVVPLAYYF LQY
Sbjct: 123 STTLVFVLASLGNLATFLMQKHADNSTSWSFDVSYVNVAACSIYGYAIVVPLAYYFFLQY 182

Query: 142 MGSSASLVRFWCLWGYSLFIFVVTSFLLLIPIELLRWIIILLAGTTSSCFVAFNLKSYME 201
           MGS+ASL+RFWCLWGYSL IF+++SFLL+IP+E LRW+IILL G  S+ FVA NL+SY+E
Sbjct: 183 MGSNASLIRFWCLWGYSLTIFIMSSFLLIIPVEFLRWVIILLTGVASASFVALNLRSYIE 242

Query: 202 GNDLTVLVVASFCLQMALAIFIKVWFFP 229
           GN+L+V ++A+F LQMALAIFIKVWFFP
Sbjct: 243 GNELSVAIIAAFFLQMALAIFIKVWFFP 270

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359807651|ref|NP_001241169.1| uncharacterized protein LOC100813483 [Glycine max] gi|255641790|gb|ACU21164.1| unknown [Glycine max]

 Score =  335 bits (860), Expect = 6e-90,   Method: Compositional matrix adjust.
 Identities = 162/268 (60%), Positives = 198/268 (73%), Gaps = 40/268 (14%)

Query: 2   DESYNNLPSSHLLGSVPAVVSEEKHATSYEAPEATMQTFPPGNGGGSRPGYQSLGSSSEG 61
           + SY  LP+SHLLGSVPAVV+EE +A+ + A  A MQ FPP NGG   PGY +LGS +E 
Sbjct: 3   ESSYTGLPTSHLLGSVPAVVTEENNASKHVATSANMQIFPPNNGGDRGPGYNTLGSPTEA 62

Query: 62  FEQQPANNWKGFFSISSYTQYFNVDTDIVINRLFSSLHPLSGDFFSKIDANPDLF----- 116
           FEQQPANNW+G FSISSY++YFNVDTD+V+ RL SSL+P++GDFFSKIDANPDL+     
Sbjct: 63  FEQQPANNWRGVFSISSYSEYFNVDTDVVLIRLISSLNPVAGDFFSKIDANPDLYGLIWI 122

Query: 117 -----------------------------------VNVAACTVYGYAIVVPLAYYFLLQY 141
                                              VNVAAC++YGYAIVVPLAYYF LQY
Sbjct: 123 STTLVFVLASLGNLATFLMQKHVDNSTSWSFDVSYVNVAACSIYGYAIVVPLAYYFFLQY 182

Query: 142 MGSSASLVRFWCLWGYSLFIFVVTSFLLLIPIELLRWIIILLAGTTSSCFVAFNLKSYME 201
           MGS+ASL+RFWC+WGYSL IF+++SFLL+IP+E LRW+IILL G  S+ FVA NL+SY+E
Sbjct: 183 MGSNASLIRFWCMWGYSLTIFIMSSFLLIIPVEFLRWVIILLTGVASASFVALNLRSYIE 242

Query: 202 GNDLTVLVVASFCLQMALAIFIKVWFFP 229
           GN+L+V ++A+F LQMALAIFIKVWFFP
Sbjct: 243 GNELSVAIIAAFFLQMALAIFIKVWFFP 270

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359486763|ref|XP_002282343.2| PREDICTED: protein YIPF1 homolog [Vitis vinifera]

 Score =  333 bits (855), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 163/270 (60%), Positives = 201/270 (74%), Gaps = 41/270 (15%)

Query: 1   MDESYNNLPSSHLLGSVPAVVSEEKHATSYEAPEATMQTFPPGNGGGSRPGYQSLGSSSE 60
           MDESYNNLP+SHLLGSVPAVV+EEK   +YE PEA +Q FPP NG     GYQ+ GS +E
Sbjct: 1   MDESYNNLPTSHLLGSVPAVVNEEKSIATYEVPEANLQIFPPNNGARGGQGYQTPGSPAE 60

Query: 61  G-FEQQPANNWKGFFSISSYTQYFNVDTDIVINRLFSSLHPLSGDFFSKIDANPDLF--- 116
           G   QQ A+NWKG FSISSYTQYFNVDTD+V+NRL SSLHP+ GDFFSKIDANPDL+   
Sbjct: 61  GDGPQQSASNWKGVFSISSYTQYFNVDTDVVLNRLISSLHPIGGDFFSKIDANPDLYGLI 120

Query: 117 -------------------------------------VNVAACTVYGYAIVVPLAYYFLL 139
                                                +N+AAC++YGYA+VVP+A+YFLL
Sbjct: 121 WTSTTLIFVIAALGNCATYLTKKQSSSSTTWSFDVGYLNLAACSIYGYALVVPVAFYFLL 180

Query: 140 QYMGSSASLVRFWCLWGYSLFIFVVTSFLLLIPIELLRWIIILLAGTTSSCFVAFNLKSY 199
           QY+GS+ASLVRFWCLWGYSLFIF+++S LL+IP+E LRW+II+LAG  S+CFVA NL++Y
Sbjct: 181 QYLGSNASLVRFWCLWGYSLFIFILSSVLLIIPVEFLRWLIIVLAGGASACFVALNLRTY 240

Query: 200 MEGNDLTVLVVASFCLQMALAIFIKVWFFP 229
           ++GND+T+++VASF LQM LA+FIK+ FFP
Sbjct: 241 IQGNDITLVIVASFVLQMGLALFIKICFFP 270

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296086170|emb|CBI31611.3| unnamed protein product [Vitis vinifera]

 Score =  333 bits (853), Expect = 5e-89,   Method: Compositional matrix adjust.
 Identities = 161/269 (59%), Positives = 199/269 (73%), Gaps = 40/269 (14%)

Query: 1   MDESYNNLPSSHLLGSVPAVVSEEKHATSYEAPEATMQTFPPGNGGGSRPGYQSLGSSSE 60
           MDESYNNLP+SHLLGSVPAVV+EEK   +YE PEA +Q FPP NG     GYQ+ GS + 
Sbjct: 1   MDESYNNLPTSHLLGSVPAVVNEEKSIATYEVPEANLQIFPPNNGARGGQGYQTPGSPAG 60

Query: 61  GFEQQPANNWKGFFSISSYTQYFNVDTDIVINRLFSSLHPLSGDFFSKIDANPDLF---- 116
              QQ A+NWKG FSISSYTQYFNVDTD+V+NRL SSLHP+ GDFFSKIDANPDL+    
Sbjct: 61  DGPQQSASNWKGVFSISSYTQYFNVDTDVVLNRLISSLHPIGGDFFSKIDANPDLYGLIW 120

Query: 117 ------------------------------------VNVAACTVYGYAIVVPLAYYFLLQ 140
                                               +N+AAC++YGYA+VVP+A+YFLLQ
Sbjct: 121 TSTTLIFVIAALGNCATYLTKKQSSSSTTWSFDVGYLNLAACSIYGYALVVPVAFYFLLQ 180

Query: 141 YMGSSASLVRFWCLWGYSLFIFVVTSFLLLIPIELLRWIIILLAGTTSSCFVAFNLKSYM 200
           Y+GS+ASLVRFWCLWGYSLFIF+++S LL+IP+E LRW+II+LAG  S+CFVA NL++Y+
Sbjct: 181 YLGSNASLVRFWCLWGYSLFIFILSSVLLIIPVEFLRWLIIVLAGGASACFVALNLRTYI 240

Query: 201 EGNDLTVLVVASFCLQMALAIFIKVWFFP 229
           +GND+T+++VASF LQM LA+FIK+ FFP
Sbjct: 241 QGNDITLVIVASFVLQMGLALFIKICFFP 269

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255566494|ref|XP_002524232.1| Protein YIPF1, putative [Ricinus communis] gi|223536509|gb|EEF38156.1| Protein YIPF1, putative [Ricinus communis]

 Score =  328 bits (842), Expect = 8e-88,   Method: Compositional matrix adjust.
 Identities = 165/270 (61%), Positives = 197/270 (72%), Gaps = 42/270 (15%)

Query: 1   MDESYNNLPSSHLLGSVPAVVSEEKHATS-YEAPEATMQTFPPG-NGGGSRPGYQSLGSS 58
           M+ESY+NLP+SHLLGSVPAVVSEEK  T+ YE PEA MQTFPP  NGGG+  GYQ+LG+ 
Sbjct: 1   MEESYSNLPTSHLLGSVPAVVSEEKSTTTTYEVPEANMQTFPPNSNGGGTTRGYQTLGTP 60

Query: 59  SEGFEQQPANNWKGFFSISSYTQYFNVDTDIVINRLFSSLHPLSGDFFSKIDANPDL--- 115
            EGFEQQ  NNWKG FSISSYTQYFNVDTDIVINR+ SS +P+ GDFF KIDA+PDL   
Sbjct: 61  PEGFEQQAPNNWKGVFSISSYTQYFNVDTDIVINRIMSSFYPIGGDFFRKIDAHPDLYGL 120

Query: 116 -------------------------------------FVNVAACTVYGYAIVVPLAYYFL 138
                                                +VNVA   +YGYAI+VPLA+YFL
Sbjct: 121 IWISTTLICLLAGLGNCATYLMQKHTESSASWNFDVGYVNVATFAIYGYAILVPLAFYFL 180

Query: 139 LQYMGSSASLVRFWCLWGYSLFIFVVTSFLLLIPIELLRWIIILLAGTTSSCFVAFNLKS 198
            QY+G++ASL+RFWC+WGYSL IFV++SFLL++P+E  RWIIIL AG  S+CFVA NLK 
Sbjct: 181 FQYLGANASLIRFWCMWGYSLVIFVISSFLLVVPVEAFRWIIILAAGIDSACFVATNLKF 240

Query: 199 YMEGNDLTVLVVASFCLQMALAIFIKVWFF 228
            + GNDLT++VV++FCLQ+ALAIFIK WFF
Sbjct: 241 CIGGNDLTIVVVSAFCLQLALAIFIKAWFF 270

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449441358|ref|XP_004138449.1| PREDICTED: protein YIPF1 homolog [Cucumis sativus]

 Score =  325 bits (834), Expect = 7e-87,   Method: Compositional matrix adjust.
 Identities = 162/271 (59%), Positives = 200/271 (73%), Gaps = 43/271 (15%)

Query: 1   MDESYNNLPSSHLLGSVPAVVSEE--KHATSYEAPEATMQTFPPGNGGGSRPGYQSLGSS 58
           MDE+Y NLP+SHLLGSVPAV++EE  K  T +E PEA MQTFPP NGG    GYQ+L S 
Sbjct: 1   MDETYTNLPTSHLLGSVPAVINEEIEKSGTEHETPEAIMQTFPPTNGGDRGRGYQTLESP 60

Query: 59  SEGFEQQPANNWKGFFSISSYTQYFNVDTDIVINRLFSSLHPLSGDFFSKIDANPDLF-- 116
           S+   QQP+N+WKG FS+SSY+QYFNVDTDIV+NRL SSL+P+ GDF SKIDANPDL+  
Sbjct: 61  SDS-HQQPSNDWKGVFSVSSYSQYFNVDTDIVMNRLISSLYPIGGDFSSKIDANPDLYGL 119

Query: 117 --------------------------------------VNVAACTVYGYAIVVPLAYYFL 138
                                                 +NVAA +VYGYAIVVP+A+YF 
Sbjct: 120 VWITTTLVFVLAALGNCATYLMQKRSDQGAAWSFDVSYMNVAAGSVYGYAIVVPMAFYFS 179

Query: 139 LQYMGSSASLVRFWCLWGYSLFIFVVTSFLLLIPIELLRWIIILLAGTTSSCFVAFNLKS 198
           LQY+GS++SL+RFWCLWGYSLFIF++ SFLLLIP+E+LRW IILL+G  S+ FV+ NL++
Sbjct: 180 LQYLGSNSSLIRFWCLWGYSLFIFILASFLLLIPVEILRWFIILLSGAASASFVSLNLRA 239

Query: 199 YMEGNDLTVLVVASFCLQMALAIFIKVWFFP 229
           Y++GNDL+VL++A+F LQMALAIFIKVWFFP
Sbjct: 240 YIDGNDLSVLIIAAFFLQMALAIFIKVWFFP 270

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449495287|ref|XP_004159789.1| PREDICTED: LOW QUALITY PROTEIN: protein YIPF1 homolog [Cucumis sativus]

 Score =  325 bits (832), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 162/271 (59%), Positives = 199/271 (73%), Gaps = 43/271 (15%)

Query: 1   MDESYNNLPSSHLLGSVPAVVSEE--KHATSYEAPEATMQTFPPGNGGGSRPGYQSLGSS 58
           MDE+Y NLP+SHLLGSVPAV++EE  K  T +E PEA MQTFPP NGG    GYQ+L S 
Sbjct: 1   MDETYTNLPTSHLLGSVPAVINEEIEKSGTEHETPEAIMQTFPPTNGGDRGRGYQTLESP 60

Query: 59  SEGFEQQPANNWKGFFSISSYTQYFNVDTDIVINRLFSSLHPLSGDFFSKIDANPDLF-- 116
           S+   QQP+N+WKG FS+SSY+QYFNVDTDIV+NRL SSL+P+ GDF SKIDANPDL+  
Sbjct: 61  SDS-HQQPSNDWKGVFSVSSYSQYFNVDTDIVMNRLISSLYPIGGDFSSKIDANPDLYGL 119

Query: 117 --------------------------------------VNVAACTVYGYAIVVPLAYYFL 138
                                                 +NVAA +VYGYAIVVP+A+YF 
Sbjct: 120 VWITTTLVFVLAALGNCATYLMQKRSDQGAAWSFDVSYMNVAAGSVYGYAIVVPMAFYFS 179

Query: 139 LQYMGSSASLVRFWCLWGYSLFIFVVTSFLLLIPIELLRWIIILLAGTTSSCFVAFNLKS 198
           LQY+GS++SL+RFWCLWGYSLFIF++ SFLLLIP+E+LRW IILL+G  S+ FV  NL++
Sbjct: 180 LQYLGSNSSLIRFWCLWGYSLFIFILASFLLLIPVEILRWFIILLSGAASASFVXLNLRA 239

Query: 199 YMEGNDLTVLVVASFCLQMALAIFIKVWFFP 229
           Y++GNDL+VL++A+F LQMALAIFIKVWFFP
Sbjct: 240 YIDGNDLSVLIIAAFFLQMALAIFIKVWFFP 270

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224109456|ref|XP_002315201.1| predicted protein [Populus trichocarpa] gi|118485151|gb|ABK94438.1| unknown [Populus trichocarpa] gi|222864241|gb|EEF01372.1| predicted protein [Populus trichocarpa]

 Score =  317 bits (813), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 167/271 (61%), Positives = 194/271 (71%), Gaps = 44/271 (16%)

Query: 1   MDESYNNLPSSHLLGSVPAVVSEEK--HATSYEAPEATMQTFPPG-NGGGSRPGYQSLGS 57
           MDESY+NLPSSHLLGSVPAVV+EEK  +  +YE PEA MQTFP   NGGG R GYQ+LGS
Sbjct: 1   MDESYDNLPSSHLLGSVPAVVTEEKAKNVVNYEVPEANMQTFPTNINGGGGR-GYQTLGS 59

Query: 58  SSEGFEQQPANNWKGFFSISSYTQYFNVDTDIVINRLFSSLHPLSGDFFSKIDANPDL-- 115
             E FEQQP NNWKG FS+SSYTQYFNVDTD VINRL SS +P  GDFFS+IDANPDL  
Sbjct: 60  LPEEFEQQPPNNWKGIFSVSSYTQYFNVDTDTVINRLMSSFYPFGGDFFSRIDANPDLYG 119

Query: 116 --------------------------------------FVNVAACTVYGYAIVVPLAYYF 137
                                                 +VNVA  +VYGYAIVVPLA+YF
Sbjct: 120 PVWVSTTLIFVLASLGNLATYLIQKHTDHKASWSFEVGYVNVAVFSVYGYAIVVPLAFYF 179

Query: 138 LLQYMGSSASLVRFWCLWGYSLFIFVVTSFLLLIPIELLRWIIILLAGTTSSCFVAFNLK 197
           LL+Y+ S+  L++FWC+WGYSLFIFV +SFLL+IP+E+LRWIIIL AG  S  FVA NLK
Sbjct: 180 LLRYLESNPKLLQFWCMWGYSLFIFVPSSFLLVIPVEVLRWIIILAAGIDSGMFVATNLK 239

Query: 198 SYMEGNDLTVLVVASFCLQMALAIFIKVWFF 228
           + +E NDLT++VVA+F LQ+ALAIF KVWFF
Sbjct: 240 TLVEPNDLTIMVVAAFFLQLALAIFFKVWFF 270

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|30688039|ref|NP_850322.1| Integral membrane Yip1 family protein [Arabidopsis thaliana] gi|19424015|gb|AAL87303.1| unknown protein [Arabidopsis thaliana] gi|24030452|gb|AAN41379.1| unknown protein [Arabidopsis thaliana] gi|330254638|gb|AEC09732.1| Integral membrane Yip1 family protein [Arabidopsis thaliana]

 Score =  306 bits (785), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 158/276 (57%), Positives = 194/276 (70%), Gaps = 48/276 (17%)

Query: 1   MDESYNNLPSSHLLGSVPAVVSEEKHATSY------EAPEATMQTFPPGNGGGSRPGYQS 54
           MDES+ NL SSHLLGSVPAV+S++K +T+       E P A+MQ FPP N G +  GYQ+
Sbjct: 1   MDESFANLQSSHLLGSVPAVISDDKRSTNVPIASVNEGPSASMQIFPP-NLGNNTKGYQT 59

Query: 55  LGSSSEGFEQQPANNWKGFFSISSYTQYFNVDTDIVINRLFSSLHPLSGDFFSKIDANPD 114
           L S +EG  QQP+NNWKGFF++ SYTQYF+VDTD+V+NRL SSL+P SGDFF+KIDANPD
Sbjct: 60  LESPTEGPAQQPSNNWKGFFNVYSYTQYFDVDTDVVLNRLMSSLYPTSGDFFNKIDANPD 119

Query: 115 L----------------------------------------FVNVAACTVYGYAIVVPLA 134
           L                                        ++N+AA  +YGYAI+VPL 
Sbjct: 120 LYGLVWICTTLVFVLASLGNCATYLVKKRTDSNAPWIFDVNYMNLAASIIYGYAIIVPLG 179

Query: 135 YYFLLQYMGSSASLVRFWCLWGYSLFIFVVTSFLLLIPIELLRWIIILLAGTTSSCFVAF 194
           +YF L+YMGS A L+RFWCLWGYSLFIFV TS  LLIP+E LRW+IILLAG+ SSCFVA 
Sbjct: 180 FYFALRYMGSKADLLRFWCLWGYSLFIFVPTSLPLLIPVEFLRWVIILLAGSASSCFVAL 239

Query: 195 NLKSYME-GNDLTVLVVASFCLQMALAIFIKVWFFP 229
           NL+SY+E  ND+TV++ A+F LQM L+IFIKVWFFP
Sbjct: 240 NLRSYLETNNDITVVMAAAFGLQMVLSIFIKVWFFP 275

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388505556|gb|AFK40844.1| unknown [Lotus japonicus]

 Score =  306 bits (784), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 152/272 (55%), Positives = 192/272 (70%), Gaps = 45/272 (16%)

Query: 2   DESYNNLPSSHLLGSVPAVVSEEKHATSYEAPEA-----TMQTFPPGNGGGSRPGYQSLG 56
           + SY  LP+SHLLGSVPA ++E+ +++ +    A      MQ FPP NGG    GYQ++G
Sbjct: 3   ESSYTGLPTSHLLGSVPAAITEDNNSSKHAPAPAPGPGANMQNFPPRNGGDGGRGYQTIG 62

Query: 57  SSSEGFEQQPANNWKGFFSISSYTQYFNVDTDIVINRLFSSLHPLSGDFFSKIDANPDLF 116
           S +E FEQQPANNW+GFF++SSY+QYFN+DTD VI RL SSL+P++GDFFSKIDANPDL+
Sbjct: 63  SPTEAFEQQPANNWRGFFNVSSYSQYFNIDTDDVITRLISSLNPVAGDFFSKIDANPDLY 122

Query: 117 ----------------------------------------VNVAACTVYGYAIVVPLAYY 136
                                                   VN+AAC++YGY IVVP+AYY
Sbjct: 123 GLVWISTTLVFILASLGNLGTYLMQKHADKSSSWSFDVSYVNMAACSIYGYTIVVPVAYY 182

Query: 137 FLLQYMGSSASLVRFWCLWGYSLFIFVVTSFLLLIPIELLRWIIILLAGTTSSCFVAFNL 196
           F LQYMGS+ASLVRFWC+WGYSL IF ++SFLL+IP+E+LRW+IILL+G  S+ FVA NL
Sbjct: 183 FFLQYMGSNASLVRFWCMWGYSLTIFNISSFLLIIPVEILRWLIILLSGGASASFVALNL 242

Query: 197 KSYMEGNDLTVLVVASFCLQMALAIFIKVWFF 228
           +SY+E  DL V VVA+F LQ+ALA+FIKVWFF
Sbjct: 243 RSYIESVDLQVAVVAAFFLQIALAVFIKVWFF 274

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	229
TAIR|locus:504955927	276	AT2G39805 "AT2G39805" [Arabido	0.497	0.413	0.695	1.1e-41
TAIR|locus:2096324	281	AT3G05280 "AT3G05280" [Arabido	0.537	0.437	0.404	2.1e-22
TAIR|locus:2146435	282	AT5G27490 "AT5G27490" [Arabido	0.528	0.429	0.411	1.1e-21
UNIPROTKB|I3L692	306	YIPF1 "Uncharacterized protein	0.489	0.366	0.330	1.9e-16
UNIPROTKB|F1PC46	305	YIPF1 "Uncharacterized protein	0.489	0.367	0.322	4.6e-16
ASPGD|ASPL0000010437	301	AN4017 [Emericella nidulans (t	0.475	0.362	0.309	7.8e-16
DICTYBASE|DDB_G0281587	347	yipf1 "Yip1 domain-containing	0.471	0.311	0.345	2.3e-15
UNIPROTKB|F1S589	312	YIPF2 "Uncharacterized protein	0.484	0.355	0.377	1.7e-14
UNIPROTKB|Q9BWQ6	316	YIPF2 "Protein YIPF2" [Homo sa	0.484	0.351	0.352	1.9e-13
UNIPROTKB|E2RIF2	310	YIPF2 "Uncharacterized protein	0.484	0.358	0.344	2.6e-13

TAIR|locus:504955927 AT2G39805 "AT2G39805" [Arabidopsis thaliana (taxid:3702)]

 Score = 442 (160.7 bits), Expect = 1.1e-41, P = 1.1e-41
 Identities = 80/115 (69%), Positives = 98/115 (85%)

Query:   116 FVNVAACTVYGYAIVVPLAYYFLLQYMGSSASLVRFWCLWGYSLFIFVVTSFLLLIPIEL 175
             ++N+AA  +YGYAI+VPL +YF L+YMGS A L+RFWCLWGYSLFIFV TS  LLIP+E 
Sbjct:   162 YMNLAASIIYGYAIIVPLGFYFALRYMGSKADLLRFWCLWGYSLFIFVPTSLPLLIPVEF 221

Query:   176 LRWIIILLAGTTSSCFVAFNLKSYME-GNDLTVLVVASFCLQMALAIFIKVWFFP 229
             LRW+IILLAG+ SSCFVA NL+SY+E  ND+TV++ A+F LQM L+IFIKVWFFP
Sbjct:   222 LRWVIILLAGSASSCFVALNLRSYLETNNDITVVMAAAFGLQMVLSIFIKVWFFP 276

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA

TAIR|locus:2096324 AT3G05280 "AT3G05280" [Arabidopsis thaliana (taxid:3702)]

 Score = 260 (96.6 bits), Expect = 2.1e-22, P = 2.1e-22
 Identities = 51/126 (40%), Positives = 85/126 (67%)

Query:   106 FSKIDANPDL-FVNVAACTVYGYAIVVPLAYYFLLQYMGSSASLVRFWCLWGYSLFIFVV 164
             + K + N D+  V  +A   YGY  +VPLA Y +L+Y  + + LV+ +CL+GYSLF+F+ 
Sbjct:   152 WKKQEWNYDINLVTWSAGVFYGYVTIVPLALYVVLKYFSAPSGLVQLFCLYGYSLFVFIP 211

Query:   165 TSFLLLIPIELLRWIIILLAGTTSSCFVAFNLKSYMEG-NDLTVLVVAS-FCLQMALAIF 222
                L ++P+E+ RW+I  +AG  S+ FVA NLK+++    + ++L++AS F LQ+ALA+ 
Sbjct:   212 ALCLSVVPVEIFRWVIAGVAGFMSATFVALNLKAHINSAGERSILIIASIFLLQLALAVV 271

Query:   223 IKVWFF 228
             +K++ F
Sbjct:   272 LKLYIF 277

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA

GO:0005829 "cytosol" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0016192 "vesicle-mediated transport" evidence=RCA

TAIR|locus:2146435 AT5G27490 "AT5G27490" [Arabidopsis thaliana (taxid:3702)]

 Score = 253 (94.1 bits), Expect = 1.1e-21, P = 1.1e-21
 Identities = 51/124 (41%), Positives = 82/124 (66%)

Query:   108 KIDANPDL-FVNVAACTVYGYAIVVPLAYYFLLQYMGSSASLVRFWCLWGYSLFIFVVTS 166
             K + N D+  V  +A   YGY  +VPLA Y +L+Y  + + LV+ +CL+GYSLF+F+   
Sbjct:   155 KQEWNYDINLVTWSAGVFYGYVTIVPLALYVVLKYFSAPSGLVQLFCLYGYSLFVFIPAL 214

Query:   167 FLLLIPIELLRWIIILLAGTTSSCFVAFNLKSYME--GNDLTVLVVASFCLQMALAIFIK 224
              L ++P+E+ RW+I  LAG  S+ FVA NLK+++   G    ++VV+ F LQ+AL++ +K
Sbjct:   215 CLSVVPLEIFRWVIAGLAGFMSATFVALNLKAHINSAGERWFLIVVSIFLLQLALSVVLK 274

Query:   225 VWFF 228
             ++ F
Sbjct:   275 LYLF 278

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA

GO:0016192 "vesicle-mediated transport" evidence=RCA

UNIPROTKB|I3L692 YIPF1 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 153 (58.9 bits), Expect = 1.9e-16, Sum P(2) = 1.9e-16
 Identities = 40/121 (33%), Positives = 64/121 (52%)

Query:   117 VNVAACTVYGYAIVVPLAYYFLLQYMGS------SASLVRFWCLWGYSLFIFVVTSFLLL 170
             V++AA  +Y YA +VPLA +  L +  S      S S +   C++GYSLFI++ T+ L +
Sbjct:   161 VSIAATIIYAYAWLVPLALWGFLVWRNSKVMNIVSYSFLEIVCVYGYSLFIYIPTAILWI 220

Query:   171 IPIELLRWIIILLA-GTTSSCFVAFNLKSYMEGNDLTVL--VVASFCLQMALAIFIKVWF 227
             IP + +RWI++ +A G + S        +  E N    L  +V    L M L++    +F
Sbjct:   221 IPQKAVRWILVTIALGISGSVLAMTFWPAVREDNRRIALATIVTIVLLHMLLSVGCLAYF 280

Query:   228 F 228
             F
Sbjct:   281 F 281

GO:0030133 "transport vesicle" evidence=IEA

GO:0016020 "membrane" evidence=IEA

UNIPROTKB|F1PC46 YIPF1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 150 (57.9 bits), Expect = 4.6e-16, Sum P(2) = 4.6e-16
 Identities = 39/121 (32%), Positives = 64/121 (52%)

Query:   117 VNVAACTVYGYAIVVPLAYYFLLQYMGS------SASLVRFWCLWGYSLFIFVVTSFLLL 170
             V++AA  +Y YA +VPLA +  L +  S      S S +   C++GYSLFI++ T+ L +
Sbjct:   161 VSIAATIIYAYAWLVPLALWGFLMWRNSKVMNIVSYSFLEIVCVYGYSLFIYIPTAVLWV 220

Query:   171 IPIELLRWIIILLA-GTTSSCFVAFNLKSYMEGNDLTVL--VVASFCLQMALAIFIKVWF 227
             IP + +RWI++++A G + S        +  E N    L  +V    L   L++    +F
Sbjct:   221 IPQKAVRWILVMIALGISGSVLAMTFWPAVREDNRRIALATIVTIVLLHTLLSVGCLAYF 280

Query:   228 F 228
             F
Sbjct:   281 F 281

GO:0030133 "transport vesicle" evidence=IEA

GO:0016020 "membrane" evidence=IEA

ASPGD|ASPL0000010437 AN4017 [Emericella nidulans (taxid:162425)]

 Score = 147 (56.8 bits), Expect = 7.8e-16, Sum P(2) = 7.8e-16
 Identities = 35/113 (30%), Positives = 56/113 (49%)

Query:   120 AACTVYGYAIVVPLAYYFLLQYMGSS-ASLVRFWCLWGYSLFIFVVTSFLLLIPIELLRW 178
             AA  VYGY   +P+A +  L++ GSS A LV  W L+GYS  +++  + +   P+  L W
Sbjct:   158 AAGLVYGYTFALPIALWGALKWFGSSTADLVECWALYGYSNLVWIAVALVSWSPLTALNW 217

Query:   179 IIILLAGTTSSCFVAFNLKSYMEGNDLTV---LVVASFCLQMALAIFIKVWFF 228
              ++ +    +  F+  NL   +   D      L++    L    AI IK+ FF
Sbjct:   218 ALVGVGFAWTVFFLLRNLYPVLSATDAKASRALLILVIVLHAGFAIAIKILFF 270

GO:0008150 "biological_process" evidence=ND

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0003674 "molecular_function" evidence=ND

DICTYBASE|DDB_G0281587 yipf1 "Yip1 domain-containing protein" [Dictyostelium discoideum (taxid:44689)]

 Score = 197 (74.4 bits), Expect = 2.3e-15, P = 2.3e-15
 Identities = 39/113 (34%), Positives = 71/113 (62%)

Query:   120 AACTVYGYAIVVPLAYYFLLQYMGSSASLVRFWCLWGYSLFIFVVTSFLLLIPIELLRWI 179
             +A T+YGY+ V+PL  + + ++M     L+   C++GY+LFIFV  S L +IP++L++WI
Sbjct:   209 SAITIYGYSFVIPLILWGIFKWMNLGLRLLDMLCIYGYTLFIFVPASILCVIPLQLVQWI 268

Query:   180 IILLAGTTSSCFVAFNLKSYMEGNDLTV--LVVASF--CLQMALAIFIKVWFF 228
             I+ +A   S  F+  N+ + ++  D T   L++ +    L + LA+ +K++FF
Sbjct:   269 IVAIASIVSGLFLVTNIFTPLK-EDFTKRGLIICAVIGALHIGLALVLKLYFF 320

GO:0016020 "membrane" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0003674 "molecular_function" evidence=ND

GO:0016021 "integral to membrane" evidence=IEA

GO:0044351 "macropinocytosis" evidence=RCA

UNIPROTKB|F1S589 YIPF2 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 147 (56.8 bits), Expect = 1.7e-14, Sum P(2) = 1.7e-14
 Identities = 46/122 (37%), Positives = 63/122 (51%)

Query:   117 VNVAACTVYGYAIVVPLAYYFLLQY-------MGSSASLVRFWCLWGYSLFIFVVTSFLL 169
             V VA  T+Y YA +VPLA +  LQ+       MG    L    C++GYSLF+F+ T  L 
Sbjct:   159 VTVAGITIYCYAWLVPLALWGFLQWRKGVRERMGPYTFLETV-CVYGYSLFVFIPTVVLW 217

Query:   170 LIPIELLRWIIILLAGTTSSCFVAFNLKSYM-EGNDLT--VLVVASFCLQMALAIFIKVW 226
             L+PI  L+W+   LA   S+  + F L   + E   L   VL+ A   L   LA+  K +
Sbjct:   218 LVPIPWLQWLFGALALALSAAGLVFTLWPVVREDTRLAAAVLLSAVVLLHALLAMGCKFY 277

Query:   227 FF 228
             FF
Sbjct:   278 FF 279

GO:0030133 "transport vesicle" evidence=IEA

GO:0016020 "membrane" evidence=IEA

UNIPROTKB|Q9BWQ6 YIPF2 "Protein YIPF2" [Homo sapiens (taxid:9606)]

 Score = 135 (52.6 bits), Expect = 1.9e-13, Sum P(2) = 1.9e-13
 Identities = 43/122 (35%), Positives = 63/122 (51%)

Query:   117 VNVAACTVYGYAIVVPLAYYFLLQY-------MGSSASLVRFWCLWGYSLFIFVVTSFLL 169
             V VA  ++Y YA +VPLA +  L++       MG    L    C++GYSLF+F+    L 
Sbjct:   162 VTVAGISIYCYAWLVPLALWGFLRWRKGVQERMGPYTFLETV-CIYGYSLFVFIPMVVLW 220

Query:   170 LIPIELLRWIIILLAGTTSSCFVAFNLKSYM-EGNDL--TVLVVASFCLQMALAIFIKVW 226
             LIP+  L+W+   LA   S+  + F L   + E   L  TVL+     L   LA+  K++
Sbjct:   221 LIPVPWLQWLFGALALGLSAAGLVFTLWPVVREDTRLVATVLLSVVVLLHALLAMGCKLY 280

Query:   227 FF 228
             FF
Sbjct:   281 FF 282

GO:0016021 "integral to membrane" evidence=IEA

GO:0030133 "transport vesicle" evidence=IDA

UNIPROTKB|E2RIF2 YIPF2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 141 (54.7 bits), Expect = 2.6e-13, Sum P(2) = 2.6e-13
 Identities = 42/122 (34%), Positives = 62/122 (50%)

Query:   117 VNVAACTVYGYAIVVPLAYYFLLQY-------MGSSASLVRFWCLWGYSLFIFVVTSFLL 169
             V VA  T+Y Y  +VPLA +  L++       MG    L    C++GYSLF+F+ T  L 
Sbjct:   158 VTVAGVTIYCYVWLVPLALWGFLRWRKGVRERMGPYTFLETV-CIYGYSLFVFIPTVVLW 216

Query:   170 LIPIELLRWIIILLAGTTSSCFVAFNLKSYM-EGNDLTVLVVAS--FCLQMALAIFIKVW 226
             LIP+  L+W+  ++A   S+  + F L   + E   L   V+ S    L   LA+  K +
Sbjct:   217 LIPVPWLQWLFGVMALVLSAASLVFTLWPVVREDTRLVAAVLLSTVVLLHALLAVGCKFY 276

Query:   227 FF 228
             FF
Sbjct:   277 FF 278

GO:0030133 "transport vesicle" evidence=IEA

GO:0016020 "membrane" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00018405001 SubName- Full=Chromosome chr13 scaffold_17, whole genome shotgun sequence; (270 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	229
KOG3114	290	consensus Uncharacterized conserved protein [Funct	100.0
KOG2946	234	consensus Uncharacterized conserved protein [Funct	99.1
KOG3103	249	consensus Rab GTPase interacting factor, Golgi mem	99.01
PF03878	240	YIF1: YIF1; InterPro: IPR005578 This family includ	98.88
COG5080	227	YIP1 Rab GTPase interacting factor, Golgi membrane	98.69
KOG3094	284	consensus Predicted membrane protein [Function unk	98.27
PF04893	172	Yip1: Yip1 domain; InterPro: IPR006977 This entry	98.25
COG5197	284	Predicted membrane protein [Function unknown]	97.87
PF06930	170	DUF1282: Protein of unknown function (DUF1282); In	94.86
PF10348	105	DUF2427: Domain of unknown function (DUF2427); Int	87.05

>KOG3114 consensus Uncharacterized conserved protein [Function unknown]

Probab=100.00  E-value=1.3e-42  Score=311.40  Aligned_cols=217  Identities=29%  Similarity=0.460  Sum_probs=176.0

Q ss_pred             CCCCCCCCCCcCCcCccccCCCccccccCCCCCCcCCCCCCCCCCCC-----------CccCCCCCCCcccCCCCCCccc
Q 027002            4 SYNNLPSSHLLGSVPAVVSEEKHATSYEAPEATMQTFPPGNGGGSRP-----------GYQSLGSSSEGFEQQPANNWKG   72 (229)
Q Consensus         4 ~y~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~q~~p~~~~~~~~~-----------~~~~~~~p~~~~~~~~~~~~~~   72 (229)
                      ++|-++.++.+|++|+.++..+.+.....+       +|+...|+..           |.+.+..++...|||. +.+-+
T Consensus         2 ~~t~~~~~~~~~~~~~~~~~~~~~~~d~~~-------~~~~~~g~~~G~~~~~~~~~~~~~~~~~~~~~~sqq~-~~~~~   73 (290)
T KOG3114|consen    2 NLTFLDFDDVSGGFEDNPDAGGPNVIDTEY-------DPSARSGSTVGGGSDEYNEQGGFDDSKATWLLQSQQV-SDQLS   73 (290)
T ss_pred             CcchhhccccccccccCCCCCCCcccCCCC-------CCccCcCCcCCCCcccccccccccCCCcccccccccc-cCCcc
Confidence            467788899999999999887755443322       2222222222           2222222222223333 33348


Q ss_pred             ceeeeccccccCCChHHHHHHhhhccccCCCCcccccCCCCCee------------------------------------
Q 027002           73 FFSISSYTQYFNVDTDIVINRLFSSLHPLSGDFFSKIDANPDLF------------------------------------  116 (229)
Q Consensus        73 ~~si~yYq~yFdVdT~~V~~Rl~~sl~P~~~~f~~~~~~~PDLY------------------------------------  116 (229)
                      +|+++||||||||||.||++||++||+| ++.+.+.++.+||||                                    
T Consensus        74 ~~ti~yyq~fFdVDt~qV~~Rl~~SliP-~~~~~~~~~~~PDLYGPfWI~~TlVf~l~~~g~~~~~i~~~t~~g~~~g~~  152 (290)
T KOG3114|consen   74 FFTIEYYQPFFDVDTAQVRKRLKESLIP-RNYVRDQIQDNPDLYGPFWITATLVFALAISGNLATFIRNGTLKGTAYGYD  152 (290)
T ss_pred             cccHHhhccccCCCHHHHHHHHHHhcCC-ccccccccCCCccccccHHHHHHHHHHHHHcccHHHHHHhccccceeeecc
Confidence            9999999999999999999999999999 555678899999999                                    


Q ss_pred             ---ehhhHHHHHHHHHHHHHHHHHHHHHhcC-----CCchHHHHHHHhhhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHH
Q 027002          117 ---VNVAACTVYGYAIVVPLAYYFLLQYMGS-----SASLVRFWCLWGYSLFIFVVTSFLLLIPIELLRWIIILLAGTTS  188 (229)
Q Consensus       117 ---l~~aa~~~ygY~~lvPl~l~~~lk~~~~-----~~sl~~liclYGYSl~i~IPvs~L~~ip~~~l~Wilv~~g~~~S  188 (229)
                         +++|++.||+|++++|+++|.+++|++.     ..++.|++|+||||+++|||+.+++++|..++||++++.++..|
T Consensus       153 f~~v~saa~~iy~Y~~ivp~~l~~iL~~~~~~~~~~~~~l~~~~~iygysl~i~ip~~vl~iv~~~~~~wvl~~~~~~~S  232 (290)
T KOG3114|consen  153 FGLVTSAATLIYGYLTIVPLALWGILSWNGYSLLLHCYVLLELVCIYGYSLFIFIPLLVLWIVPSSMVQWVLVGTALGLS  232 (290)
T ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHHHhccccccccceehhhHHHHHhhHHHHHHHHHHHHhccHHHHHHHHHHHHHHHh
Confidence               8999999999999999999999999884     35789999999999999999999999999999999999999999


Q ss_pred             HHHHHHhhccccc-CC---ceeehHHHHHHHHHHHHHHHHHHcCC
Q 027002          189 SCFVAFNLKSYME-GN---DLTVLVVASFCLQMALAIFIKVWFFP  229 (229)
Q Consensus       189 ~~fl~~nL~~~l~-~~---k~~liv~~i~~lH~~lal~~K~yFF~  229 (229)
                      +.||..++++..+ ..   +....++.++++|+++|+++|+|||+
T Consensus       233 ~~~L~~~l~p~~~~~~~~~~a~~~iv~ivllh~lla~~~~lyfF~  277 (290)
T KOG3114|consen  233 GTFLAGTLWPAVRLDGILHFAFLLIVEIVLLHLLLALGFKLYFFD  277 (290)
T ss_pred             HHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHhccceeEEec
Confidence            9999999999986 22   34667788899999999999999995

>KOG2946 consensus Uncharacterized conserved protein [Function unknown]

Probab=99.10  E-value=4.5e-10  Score=98.07  Aligned_cols=135  Identities=19%  Similarity=0.239  Sum_probs=106.9

Q ss_pred             CCChHHHHHHhhhccccCCCCcc--cccCCCCCee------ehh--------------hHHHHHHHHHHHHHHHHHHHHH
Q 027002           84 NVDTDIVINRLFSSLHPLSGDFF--SKIDANPDLF------VNV--------------AACTVYGYAIVVPLAYYFLLQY  141 (229)
Q Consensus        84 dVdT~~V~~Rl~~sl~P~~~~f~--~~~~~~PDLY------l~~--------------aa~~~ygY~~lvPl~l~~~lk~  141 (229)
                      +-|-.+|..|+++.+.|+.- |.  .++.+.+|||      +..              -.+.+|.-+|.+-+++++..|.
T Consensus        68 krD~~~I~~kl~~Vl~P~py-~~dk~~~lRDwDlWGPl~~~~~la~iL~~s~~~~~~~vFs~vf~i~wfG~~vvtln~kL  146 (234)
T KOG2946|consen   68 KRDLRAIGSKLKHVLYPHPY-FEDKGQLLRDWDLWGPLFFCVFLALILSLSGSVKSASVFAVVFAILWFGAVVVTLNIKL  146 (234)
T ss_pred             HHHHHHHHhceEEEEccCCC-cccccceeecccccchhHHHHHHHHHHHhhcCcccchhHHHHHHHHHHHHHHHHHHHHH
Confidence            45778899999999999741 22  2345667999      111              1334777889999999999999


Q ss_pred             hcCCCchHHHHHHHhhhhhHHHHHH-HHhhh-hHHHHHHHHHHHHHHHHHHHHHHhhcccccCCceeehHHHHHHHHHHH
Q 027002          142 MGSSASLVRFWCLWGYSLFIFVVTS-FLLLI-PIELLRWIIILLAGTTSSCFVAFNLKSYMEGNDLTVLVVASFCLQMAL  219 (229)
Q Consensus       142 ~~~~~sl~~liclYGYSl~i~IPvs-~L~~i-p~~~l~Wilv~~g~~~S~~fl~~nL~~~l~~~k~~liv~~i~~lH~~l  219 (229)
                      .|++.+++|.+|+.|||+++....+ ++|.. +...+|-++..+|.+||++.-...+.....+.||.+++.+++.+-+.+
T Consensus       147 LGgnIs~fQsl~IlGYCLfPl~v~ali~~~~~~l~~lr~vv~~~~~~WSsyaa~~~l~~~~~~~kk~LavYPvFL~y~~~  226 (234)
T KOG2946|consen  147 LGGNISFFQSLCILGYCLFPLVVAALIICLFRDLFFLRLVVTSIGLAWSSYAAMGFLSISQLPRKKLLAVYPVFLFYFSV  226 (234)
T ss_pred             hCCceeEEeehhhhhhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhccccccccceehhhHHHHHHhh
Confidence            9999999999999999999999986 56665 567899999999999998887777776666788888888887665433

>KOG3103 consensus Rab GTPase interacting factor, Golgi membrane protein [Intracellular trafficking, secretion, and vesicular transport]

Probab=99.01  E-value=3.5e-09  Score=93.40  Aligned_cols=139  Identities=20%  Similarity=0.271  Sum_probs=111.9

Q ss_pred             CCChHHHHHHhhhccccCCCCcccccCCCCCee------ehhhHHH----------HHHHHHHHHHHHHHHHHHhc-CCC
Q 027002           84 NVDTDIVINRLFSSLHPLSGDFFSKIDANPDLF------VNVAACT----------VYGYAIVVPLAYYFLLQYMG-SSA  146 (229)
Q Consensus        84 dVdT~~V~~Rl~~sl~P~~~~f~~~~~~~PDLY------l~~aa~~----------~ygY~~lvPl~l~~~lk~~~-~~~  146 (229)
                      ++|-+++.+|.+..|+|+|.. -..+.+++||.      +..+.++          |||.+.+..+.++.+++.++ .+.
T Consensus        89 gInf~hI~~KT~~VLnP~r~~-~q~i~~d~DlaGPlvf~L~f~~flLl~gKi~FgyIygi~~~gsl~iy~L~nlm~~~nv  167 (249)
T KOG3103|consen   89 GINFDHIKQKTRAVLNPFRSA-DQSIMKDTDLAGPLVFCLLFGLFLLLAGKIHFGYIYGISLLGSLSIYFLLNLMSNKNV  167 (249)
T ss_pred             CCCHHHHHHHHhheecccccC-ceEEecCcccccchHHHHHHHHHHHhcCceEEEEEeeeHHHHHHHHHHHHHHHhhcCc
Confidence            688999999999999999863 15578999999      3333333          67788899999999999998 678


Q ss_pred             chHHHHHHHhhhhhHHHHHHHHhhh-h-HHHHHHHHHHHHHHHHHHHHHHhhccccc-CCceeehHHHHHHHHHHHHHHH
Q 027002          147 SLVRFWCLWGYSLFIFVVTSFLLLI-P-IELLRWIIILLAGTTSSCFVAFNLKSYME-GNDLTVLVVASFCLQMALAIFI  223 (229)
Q Consensus       147 sl~~liclYGYSl~i~IPvs~L~~i-p-~~~l~Wilv~~g~~~S~~fl~~nL~~~l~-~~k~~liv~~i~~lH~~lal~~  223 (229)
                      ++.+..++.|||+.+.+..+.+.++ + ...++.++.+++.+||+..-..-+...++ ++++.++...++.+--+|+++.
T Consensus       168 ~f~~~aSVlGYcLLPlvvlS~v~i~~~~~g~vg~il~~~~v~W~t~aaS~lfv~al~~~~~rlLiaYp~~l~Y~~Fall~  247 (249)
T KOG3103|consen  168 SFGCVASVLGYCLLPLVVLSFVNIFVGLQGTVGYILSALFVLWCTYAASKLFVSALSMENQRLLVAYPCALLYGVFALIV  247 (249)
T ss_pred             ceeeehHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhhhhHHHHHHhhheeEE
Confidence            9999999999999999999988776 3 35689999999999987766665666565 6777778788888877777653

>PF03878 YIF1: YIF1; InterPro: IPR005578 This family includes a number of eukaryotic proteins

Probab=98.88  E-value=1.6e-08  Score=89.95  Aligned_cols=156  Identities=21%  Similarity=0.292  Sum_probs=104.4

Q ss_pred             CCCCcccceeeeccccccCCChHHHHHHhhhccccCCCC-cc-----c-----ccC-CCCCeeehh--------------
Q 027002           66 PANNWKGFFSISSYTQYFNVDTDIVINRLFSSLHPLSGD-FF-----S-----KID-ANPDLFVNV--------------  119 (229)
Q Consensus        66 ~~~~~~~~~si~yYq~yFdVdT~~V~~Rl~~sl~P~~~~-f~-----~-----~~~-~~PDLYl~~--------------  119 (229)
                      -+++...+.+.+-.|.|||||++=|.+||+--+.|+... ..     +     +.+ +-||||++.              
T Consensus        26 v~~~~~~~~~~~~lk~YF~V~n~YV~~KL~lllfPf~~k~W~r~~~~~~~~~Pr~DvNAPDLYIPlMa~vTYiLl~g~~~  105 (240)
T PF03878_consen   26 VQKNLGRYVSVSSLKYYFAVDNSYVLKKLKLLLFPFLHKDWSRKYEQESYLPPREDVNAPDLYIPLMAFVTYILLSGLIL  105 (240)
T ss_pred             HHHHHhhhcCcccceeeEECCHHHHHHHHHHeecccccCCccccccccCCCCchhhccCcccccchHHHHHHHHHHHHHH
Confidence            355666677777899999999999999999999996431 10     0     112 349999222              


Q ss_pred             -------------hHHHHHHHHHHHHHHHHHHHHHhcC--CCchHHHHHHHhhhhhHHHHHHHHhhhhHHHHHHHHHHHH
Q 027002          120 -------------AACTVYGYAIVVPLAYYFLLQYMGS--SASLVRFWCLWGYSLFIFVVTSFLLLIPIELLRWIIILLA  184 (229)
Q Consensus       120 -------------aa~~~ygY~~lvPl~l~~~lk~~~~--~~sl~~liclYGYSl~i~IPvs~L~~ip~~~l~Wilv~~g  184 (229)
                                   .++-.....++==+++++.+..++.  +.++.|++|.-||..+.-|.+.+...+-..+.-|+..+..
T Consensus       106 G~~g~F~Pe~Lg~~~s~al~~~~lEv~i~k~~~y~l~~~~~~~~lDlvay~GYKfv~ii~~~l~~~l~~~~~yy~~~ly~  185 (240)
T PF03878_consen  106 GLQGRFSPELLGIQASSALVWWFLEVLIIKLGLYLLNISSSLPILDLVAYSGYKFVGIILTLLASLLFGSWVYYIALLYT  185 (240)
T ss_pred             HhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHHHhhcchHHHHHHHHHHHHHcccHHHHHHHHHH
Confidence                         2222222222222333444444555  6799999999999988887777776665568889999999


Q ss_pred             HHHHHHHHHHhhccccc-------C-------Cce-eehHHHHHHHHHHHHH
Q 027002          185 GTTSSCFVAFNLKSYME-------G-------NDL-TVLVVASFCLQMALAI  221 (229)
Q Consensus       185 ~~~S~~fl~~nL~~~l~-------~-------~k~-~liv~~i~~lH~~lal  221 (229)
                      .+..+.|+++.++..+-       +       +|+ .-.+..++++|..++.
T Consensus       186 ~~a~~~Fl~RsLk~~i~~~~~~~~~~~~~~~~~~~r~yfL~~~a~~Q~~l~~  237 (240)
T PF03878_consen  186 SFANAFFLLRSLKRVILPSPSSSYGSVSSSSQRKRRNYFLFFIAIVQPPLMF  237 (240)
T ss_pred             HHHHHHHHHHHHHHHHhcCcccccccccccccceeehhHHHHHHHHHHHHHH
Confidence            99999999999875432       1       122 2344556677776654

It is an integral membrane protein, conserved in at least 1 copy in all sequenced eukaryotes. The gene name in Schizosaccharomyces pombe (Fission yeast) is hrf1+ for Heavy metal Resistance Factor 1.

>COG5080 YIP1 Rab GTPase interacting factor, Golgi membrane protein [Intracellular trafficking and secretion]

Probab=98.69  E-value=1.9e-08  Score=87.44  Aligned_cols=135  Identities=24%  Similarity=0.331  Sum_probs=100.1

Q ss_pred             HHHHHHhhhccccCCCCcccccCCCCCee------------ehhh----HHHHHHHHHHHHHHHHHHHHHhc-CCCchHH
Q 027002           88 DIVINRLFSSLHPLSGDFFSKIDANPDLF------------VNVA----ACTVYGYAIVVPLAYYFLLQYMG-SSASLVR  150 (229)
Q Consensus        88 ~~V~~Rl~~sl~P~~~~f~~~~~~~PDLY------------l~~a----a~~~ygY~~lvPl~l~~~lk~~~-~~~sl~~  150 (229)
                      ..++++....+.|++..- .++.++.|||            ++.+    .+-+|+-.+.+-+.+.+.+|.++ .+.++++
T Consensus        70 ~~i~~ks~~vl~p~~~~~-~~i~~d~DL~gPliF~lL~sLfLsla~~shFgyiy~islfg~lsl~~~lrLl~~~ni~f~~  148 (227)
T COG5080          70 GHIKSKSDDVLGPFDNKA-FDILADCDLWGPLIFILLYSLFLSLAGKSHFGYIYGISLFGTLSLHLLLRLLGHKNISFFS  148 (227)
T ss_pred             cccccccceeeecccccc-hhhhhcccccccHHHHHHHHHHHHhcccceeehhhHHHHHHHHHHHHHHHHhccCceeeee
Confidence            455667777778876521 2467899999            2222    23477788888999999999999 5789999


Q ss_pred             HHHHHhhhhhHHHHHHHHhhhh--HHHHHHHHHHHHHHHHHHHHHHhhccccc-CCceeehHHHHHHHHHHHHHHH
Q 027002          151 FWCLWGYSLFIFVVTSFLLLIP--IELLRWIIILLAGTTSSCFVAFNLKSYME-GNDLTVLVVASFCLQMALAIFI  223 (229)
Q Consensus       151 liclYGYSl~i~IPvs~L~~ip--~~~l~Wilv~~g~~~S~~fl~~nL~~~l~-~~k~~liv~~i~~lH~~lal~~  223 (229)
                      .+|+.|||+++.+..+++|.+-  +.+.--++++++..||.......+++.++ .+|+.+++..+...--.|++.+
T Consensus       149 ~~SIlGYs~lPlv~~slv~~i~~~i~i~~~vv~~l~~~Ws~~AaS~v~~~~l~l~n~~llv~Ypl~LFY~~fa~ii  224 (227)
T COG5080         149 TISILGYSLLPLVFNSLVSIILGRILILGYVVVALFLIWSTYAASGVLKSKLQLSNKRLLVVYPLLLFYNVFAIII  224 (227)
T ss_pred             hhHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhhheEEE
Confidence            9999999999999999999873  34455666777888888877777776666 6777777777666555555443

>KOG3094 consensus Predicted membrane protein [Function unknown]

Probab=98.27  E-value=1.9e-05  Score=70.90  Aligned_cols=156  Identities=18%  Similarity=0.222  Sum_probs=96.3

Q ss_pred             CCCcccceeeeccccccCCChHHHHHHhhhccccCCC-Cccc-----------ccCCCCCeeehhhHHHHHH--------
Q 027002           67 ANNWKGFFSISSYTQYFNVDTDIVINRLFSSLHPLSG-DFFS-----------KIDANPDLFVNVAACTVYG--------  126 (229)
Q Consensus        67 ~~~~~~~~si~yYq~yFdVdT~~V~~Rl~~sl~P~~~-~f~~-----------~~~~~PDLYl~~aa~~~yg--------  126 (229)
                      +++..++++..-.+-||+||+.=|++||+--+.|+.. +...           .--+.||||+..-+.+-|.        
T Consensus        74 ~~~~~k~~~~~~l~yYF~Vdn~YV~~KL~lilfPf~hk~W~~~~~~~~~~PPr~DvNaPDLYiP~MafiTYIll~gl~lG  153 (284)
T KOG3094|consen   74 EKNLGKYVSVPKLKYYFAVDNAYVGKKLKLILFPFLHKDWTRIYERESPLPPRYDVNAPDLYIPLMAFITYILLAGLLLG  153 (284)
T ss_pred             HHHhhhhccCccceEEEEechHHHhhhheEEEeeecCcchhhhhcccCCCCccccCCCcchhhhHHHHHHHHHHHHHHhh
Confidence            4555666666667889999999999999999999743 1111           1235689994333333221        


Q ss_pred             -----------HHH-------HHHHHHHHHHHH-hcC--CCchHHHHHHHhhhhhHHHHHHHHhhhhHHHHHHHHHHHHH
Q 027002          127 -----------YAI-------VVPLAYYFLLQY-MGS--SASLVRFWCLWGYSLFIFVVTSFLLLIPIELLRWIIILLAG  185 (229)
Q Consensus       127 -----------Y~~-------lvPl~l~~~lk~-~~~--~~sl~~liclYGYSl~i~IPvs~L~~ip~~~l~Wilv~~g~  185 (229)
                                 +.+       ++=+++..+..| .+.  +.+.++++|.-||-.+..|.+.+.-.+-..+...++...-.
T Consensus       154 lqg~FsPE~Lg~~~s~al~~v~le~l~l~l~lY~l~vs~~ls~ldllAysGYKfv~liL~~L~k~~~~~~~yyi~~~yt~  233 (284)
T KOG3094|consen  154 LQGRFSPEALGILASKALAWVILEVLLLKLGLYLLNVSSSLSTLDLLAYSGYKFVGLILAQLTKLLFGPYGYYIALAYTY  233 (284)
T ss_pred             hccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHheecccCCcchhHhhhhcccchHHHHHHHHhhheecchhHHHHHHHHH
Confidence                       111       222222223333 233  67899999999999998888877766644445555555555


Q ss_pred             HHHHHHHHHhhccccc------C----C-ceeehHHHHHHHHHHHHHH
Q 027002          186 TTSSCFVAFNLKSYME------G----N-DLTVLVVASFCLQMALAIF  222 (229)
Q Consensus       186 ~~S~~fl~~nL~~~l~------~----~-k~~liv~~i~~lH~~lal~  222 (229)
                      +.-+.|+++.++..+-      +    . |+.-.+..+++.|..++..
T Consensus       234 ~a~gvFLlRSlK~~ll~~~~~~~~v~q~~r~~YfLf~ia~~Q~~~l~w  281 (284)
T KOG3094|consen  234 LAFGVFLLRSLKRALLAESSMADPVPQSSRRLYFLFFIAAVQFLILYW  281 (284)
T ss_pred             HHHHHHHHHHHHHHHcCCccccCccchhhhhHHHHHHHHHHHHHHHHH
Confidence            5557888888876542      1    1 2333445556666665543

>PF04893 Yip1: Yip1 domain; InterPro: IPR006977 This entry contains proteins belonging to the Yip1 family and represents the Yip1 domain

Probab=98.25  E-value=2.2e-05  Score=63.32  Aligned_cols=76  Identities=17%  Similarity=0.304  Sum_probs=63.5

Q ss_pred             HHHHHHHHHHHHHHHHhcCCCchHHHHHHHhhhhhHHHHHHHHhhhhHHH---HHHHHHHHHHHHHHHHHHHhhccccc
Q 027002          126 GYAIVVPLAYYFLLQYMGSSASLVRFWCLWGYSLFIFVVTSFLLLIPIEL---LRWIIILLAGTTSSCFVAFNLKSYME  201 (229)
Q Consensus       126 gY~~lvPl~l~~~lk~~~~~~sl~~liclYGYSl~i~IPvs~L~~ip~~~---l~Wilv~~g~~~S~~fl~~nL~~~l~  201 (229)
                      .-.++.+.++|.+.|.+|++.++.|.+|++|||.++.+...+++.+....   +...+..++.+|+...+..-++..-+
T Consensus        75 i~~~i~~~~~~~~~~~~gg~~~~~~~~~~~~ya~~P~~~~~~~~~~~~~~~~~~~~~~~~l~~iw~~~l~~~gl~~~~~  153 (172)
T PF04893_consen   75 IGWFILALILHLIAKLFGGKGSFKETFSVVGYALIPLLLGSLISIILSLFFGPLSLLVIILFSIWSAYLLVIGLREVHR  153 (172)
T ss_pred             HHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence            45667888999999999999999999999999999999988888875543   34577788889999888888887766

The Yip1 integral membrane domain contains four transmembrane alpha helices. The domain is characterised by the motifs DLYGP and GY. The Yip1 protein is a golgi protein involved in vesicular transport that interacts with GTPases [].; GO: 0016020 membrane

>COG5197 Predicted membrane protein [Function unknown]

Probab=97.87  E-value=0.00012  Score=64.58  Aligned_cols=129  Identities=18%  Similarity=0.282  Sum_probs=81.1

Q ss_pred             ccceeeeccccccCCChHHHHHHhhhccccCCCC-cc-----------cccCCCCCeeehhhHHHHHH------------
Q 027002           71 KGFFSISSYTQYFNVDTDIVINRLFSSLHPLSGD-FF-----------SKIDANPDLFVNVAACTVYG------------  126 (229)
Q Consensus        71 ~~~~si~yYq~yFdVdT~~V~~Rl~~sl~P~~~~-f~-----------~~~~~~PDLYl~~aa~~~yg------------  126 (229)
                      ..-.+..-.+-|||||+.-|++|++--+.|+.+. ..           ...-+.||+|+..-+.+-|.            
T Consensus        75 g~~~s~~~~~tYF~V~n~yVi~KL~LIlfPf~nk~W~r~gd~eg~~pp~~d~nsPdmY~P~M~fvtyILl~~~~~GL~g~  154 (284)
T COG5197          75 GNAASSQQISTYFQVSNRYVINKLKLILFPFLNKNWQRIGDSEGFLPPRDDVNSPDMYMPIMGFVTYILLWNTQQGLKGS  154 (284)
T ss_pred             cccccccceeEEEEechHhHHhhhheEEeecccchhhhccCCCCCCCchhhcCCccccchHHHHHHHHHHHHHHhhcccC
Confidence            3345566688999999999999999999998642 11           01236699994433333221            


Q ss_pred             -------HH----HHHHHHHHHHHHH------hcCCCchHHHHHHHhhhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHHH
Q 027002          127 -------YA----IVVPLAYYFLLQY------MGSSASLVRFWCLWGYSLFIFVVTSFLLLIPIELLRWIIILLAGTTSS  189 (229)
Q Consensus       127 -------Y~----~lvPl~l~~~lk~------~~~~~sl~~liclYGYSl~i~IPvs~L~~ip~~~l~Wilv~~g~~~S~  189 (229)
                             |.    +.+=++=.++.|.      .+...++++++|.-||-.++.|...+.-.+-..|..=++...-.+.-+
T Consensus       155 F~PE~lg~~~s~~~a~v~v~~l~trlg~Yll~~s~~~~~ldllaysGYKfV~liL~qL~k~~~Mp~v~~i~~~Ylyiaf~  234 (284)
T COG5197         155 FNPEDLGYKLSSTLAFVCVDLLITRLGLYLLIDSKIPSFLDLLAYSGYKFVPLILAQLLKNVTMPFVLNILIFYLYIAFG  234 (284)
T ss_pred             CCHHHhhHHHHHHHHHHHHHHHHHHhceEEEeecccchhhhhhhhcccccHHHHHHHHhhhccccHHHHHHHHHHHHHHH
Confidence                   11    1111111222332      123568899999999998888888877665555554455555555567


Q ss_pred             HHHHHhhccc
Q 027002          190 CFVAFNLKSY  199 (229)
Q Consensus       190 ~fl~~nL~~~  199 (229)
                      .|+.+.++-.
T Consensus       235 vFLlRSlK~~  244 (284)
T COG5197         235 VFLLRSLKFN  244 (284)
T ss_pred             HHHHHHHHHh
Confidence            8888887643

>PF06930 DUF1282: Protein of unknown function (DUF1282); InterPro: IPR009698 This entry represents several hypothetical proteins of around 200 residues in length

Probab=94.86  E-value=0.91  Score=37.78  Aligned_cols=64  Identities=16%  Similarity=0.250  Sum_probs=54.3

Q ss_pred             HHHHhcCCCchHHHHHHHhhhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhhccccc
Q 027002          138 LLQYMGSSASLVRFWCLWGYSLFIFVVTSFLLLIPIELLRWIIILLAGTTSSCFVAFNLKSYME  201 (229)
Q Consensus       138 ~lk~~~~~~sl~~liclYGYSl~i~IPvs~L~~ip~~~l~Wilv~~g~~~S~~fl~~nL~~~l~  201 (229)
                      +.|-++.+.++-|+.-..||+.++.....++..+|..|+--....++..++...++.-+....+
T Consensus        86 ~~~~~~~~~s~~~~~~~a~y~~tPl~L~~i~~~~~~~~l~~~~~~~~~~~~~~Lly~Gv~~~~~  149 (170)
T PF06930_consen   86 MMKTFGGRPSYKKCLAFAAYAATPLFLGGIVNLYPSLWLTLLVGLIALIYSVYLLYLGVPIFMN  149 (170)
T ss_pred             HHHHcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence            4455667889999999999999999999999999988877777788889999999888877665

The function of is unknown although a number of the members are thought to be putative membrane proteins.

>PF10348 DUF2427: Domain of unknown function (DUF2427); InterPro: IPR018825 This entry represents the N-terminal region of a family of proteins conserved in fungi

Probab=87.05  E-value=2.9  Score=32.72  Aligned_cols=53  Identities=11%  Similarity=0.302  Sum_probs=32.1

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHhhcccc-cC---CceeehHHHHHHHHHHHHHHHHH
Q 027002          171 IPIELLRWIIILLAGTTSSCFVAFNLKSYM-EG---NDLTVLVVASFCLQMALAIFIKV  225 (229)
Q Consensus       171 ip~~~l~Wilv~~g~~~S~~fl~~nL~~~l-~~---~k~~liv~~i~~lH~~lal~~K~  225 (229)
                      +|...+.+++.++|.+....+  .+-.|.+ .+   .|...++..+.++|.++++..|+
T Consensus        48 ~~~q~~~~~l~~~g~~~g~~~--~~~~p~lyp~n~H~k~g~il~~l~~~q~~~gv~~~~  104 (105)
T PF10348_consen   48 LPVQTVFLVLMILGLFLGSVY--NGSTPDLYPNNAHGKMGWILFVLMIVQVILGVILKL  104 (105)
T ss_pred             HHHHHHHHHHHHHHHHHHHHH--hcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            355556666666665555543  3333334 22   23445667778899999999875

Several of these proteins are annotated as being Ftp1 but this could not be confirmed. Their function is not known.

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00