Citrus Sinensis ID: 027144

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------
Protein Sequence
MMRPATMIRNACLRNFSQSLRVGSAFLKSGDFCRYTSQAAASLQQDCEPSAYSDDESADHMDWDNLGFGLTPADYMYTMKCSNDYFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNYFKVAAFSHETYSGFEF
Secondary Structure (PSIPRED)
cccccHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEEccccccccEEEEccccccccccccHHHHHHHHHHccccccccccEEEEcHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHccccccccccccEEEccEEEEEcccccccccccEEEEEEEEcccccccccccccEEEccccc
Secondary Structure Prediction (SSPRO)
cccccHHHcHHcccccccccccccHHHHcccccccccccccccEEEEEcccccccHHHHHHHHcccccccccccEEEEEEEEccEEcccEEEEcccEEEcccEHHHHcccEEEccEEEEEEcccEEEEEcHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHcHHHcccccccEEEEEEEEEEccEcccccccccEEEEEEEEEEccccccccccEEEEEEccc
Coil and Loop (DISEMBL)
MMRPATMIRNACLRNFsqslrvgsaflksgdfcRYTSQAAASLQqdcepsaysddesadhmdwdnlgfgltpadymytmkcsndyfekgrlsrygkielspssgvlnygQGLFEGMKAYRKedgqlvlfrpdqnairlqtgaermcmpspsiDQFIDAVKQTALankrwvpppgkgslyirpllvgsgpilglapapeytflvfaspvgnyfKVAAFshetysgfef
Flexible Loop (DISEMBL)
MMRPATMIRNACLRNFSQSLRVGSAFLKSGDFCRYTSQAAASLQQDCEPSAYSDDESADHMDWDNLGFGLTPADYMYTMKCSNDYFEKGRLSRYGKielspssgvLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALAnkrwvpppgkGSLYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNYFKVAAFSHETYSGFEF
Low Complexity Region (SEG)
MMRPATMIRNACLRNFSQSLRVGSAFLKSGDFCRYTSQAAASLQQDCEPSAYSDDESADHMDWDNLGFGLTPADYMYTMKCSNDYFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNYFKVAAFSHETYSGFEF
Disordered region (IsUnstruct)
*******IRNACLRNFSQSLRVGSAFLKSGDFCRYTS***********************MDWDNLGFGLTPADYMYTMKCSNDYFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNYFKVAAFSHETY*****
Disordered Region (DISOPRED)
**************************************************************WDNLGFGLTPADYMYTMKCSNDYFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNYFKVAAFSHETYSGFEF
Disordered Region (DISEMBL)
MMRPATMIRNACLRNFSQSLRVGSAFLKSGDFCRYTSQA*****************SADHMDWDNLGFGLTPADYMYTMKCSNDYFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNYFKVAAFSHETYSGFEF
Disordered Region (DISPRO)
*MRPATMIRNACLRNFSQSLRVGSAFL*SGDFCRYTSQAAASLQQDCEPSAYSDDESADHMDWDNLGFGLTPADYMYTMKCSNDYFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNYFKVAAFSHETYSGFE*
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MMRPATMIRNACLRNFSQSLRVGSAFLKSGDFCRYTSQAAASLQQDCEPSAYSDDESADHMDWDNLGFGLTPADYMYTMKCSNDYFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNYFKVAAFSHETYSGFEF
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	227	2.2.26 [Sep-21-2011]
Q9M439	388	Branched-chain-amino-acid	yes	no	0.907	0.530	0.629	8e-75
Q9FYA6	415	Branched-chain-amino-acid	no	no	0.885	0.484	0.592	8e-69
Q9M401	413	Branched-chain-amino-acid	no	no	0.691	0.380	0.7	1e-66
Q93Y32	384	Branched-chain-amino-acid	no	no	0.872	0.515	0.588	7e-65
Q9LPM9	356	Branched-chain-amino-acid	no	no	0.713	0.455	0.638	5e-62
Q9LPM8	367	Putative branched-chain-a	no	no	0.713	0.441	0.631	1e-61
Q9LE06	354	Methionine aminotransfera	no	no	0.722	0.463	0.560	3e-53
Q9ZJF1	340	Branched-chain-amino-acid	yes	no	0.682	0.455	0.448	9e-35
O26004	340	Branched-chain-amino-acid	yes	no	0.682	0.455	0.448	3e-34
P54689	343	Branched-chain-amino-acid	yes	no	0.674	0.446	0.422	6e-32

>sp|Q9M439|BCAT2_ARATH Branched-chain-amino-acid aminotransferase 2, chloroplastic OS=Arabidopsis thaliana GN=BCAT2 PE=1 SV=1

 Score =  280 bits (715), Expect = 8e-75,   Method: Compositional matrix adjust.
 Identities = 136/216 (62%), Positives = 166/216 (76%), Gaps = 10/216 (4%)

Query: 1   MMRPATMIRNACLRNFSQSLRVGSAFLKSGDFCRYTSQAAASLQQDCEPSAYS--DDESA 58
           M++  T +R   +      +R    F K      Y +QAA++L+++ +   Y   DD  A
Sbjct: 1   MIKTITSLRKTLVLPLHLHIRTLQTFAK------YNAQAASALREERKKPLYQNGDDVYA 54

Query: 59  DHMDWDNLGFGLTPADYMYTMKCSND-YFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMK 117
           D +DWDNLGFGL PADYMY MKCS D  F +G LS YG I+LSPS+GVLNYGQ ++EG K
Sbjct: 55  D-LDWDNLGFGLNPADYMYVMKCSKDGEFTQGELSPYGNIQLSPSAGVLNYGQAIYEGTK 113

Query: 118 AYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGKGS 177
           AYRKE+G+L+LFRPD NAIR++ GAERM MPSPS+DQF++AVKQTALANKRWVPP GKG+
Sbjct: 114 AYRKENGKLLLFRPDHNAIRMKLGAERMLMPSPSVDQFVNAVKQTALANKRWVPPAGKGT 173

Query: 178 LYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNYFK 213
           LYIRPLL+GSGPILGL PAPEYTF+V+ASPVGNYFK
Sbjct: 174 LYIRPLLMGSGPILGLGPAPEYTFIVYASPVGNYFK 209

Converts 2-oxo acids to branched-chain amino acids. Acts on leucine, isoleucine and valine.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 6EC: .EC: 1EC: .EC: 4EC: 2

>sp|Q9FYA6|BCAT5_ARATH Branched-chain-amino-acid aminotransferase 5, chloroplastic OS=Arabidopsis thaliana GN=BCAT5 PE=1 SV=1

 Score =  259 bits (663), Expect = 8e-69,   Method: Compositional matrix adjust.
 Identities = 122/206 (59%), Positives = 159/206 (77%), Gaps = 5/206 (2%)

Query: 11  ACLRNF-SQSLRVGSA-FLKSGDFCRYTSQAAASLQQDCEPSAYSDDESADHMDWDNLGF 68
           + LRNF S SLR+       S +F    S+ + + + D   S+ +D      +DWD + F
Sbjct: 32  SSLRNFPSSSLRIRHCPSPISSNFI--VSEVSRNRRCDAVSSSTTDVTELAEIDWDKIDF 89

Query: 69  GLTPADYMYTMKCSND-YFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLV 127
           GL P DYMY MKCS D  F +G+L  +G I+++P++GVLNYGQGLFEG+KAYRK+DG ++
Sbjct: 90  GLKPTDYMYAMKCSRDGEFSQGQLQPFGNIDINPAAGVLNYGQGLFEGLKAYRKQDGNIL 149

Query: 128 LFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGKGSLYIRPLLVGS 187
           LFRP++NAIR++ GAERMCMPSP+++QF++AVK T LANKRW+PPPGKGSLYIRPLL+G+
Sbjct: 150 LFRPEENAIRMRNGAERMCMPSPTVEQFVEAVKTTVLANKRWIPPPGKGSLYIRPLLMGT 209

Query: 188 GPILGLAPAPEYTFLVFASPVGNYFK 213
           G +LGLAPAPEYTFL+F SPVGNYFK
Sbjct: 210 GAVLGLAPAPEYTFLIFVSPVGNYFK 235

Converts 2-oxo acids to branched-chain amino acids. Acts on leucine, isoleucine and valine.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 4

EC: 2

>sp|Q9M401|BCAT3_ARATH Branched-chain-amino-acid aminotransferase 3, chloroplastic OS=Arabidopsis thaliana GN=BCAT3 PE=1 SV=1

 Score =  252 bits (644), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 112/160 (70%), Positives = 140/160 (87%), Gaps = 3/160 (1%)

Query: 56  ESADHMDWDNLGFGLTPADYMYTMKCSND-YFEKGRLSRYGKIELSPSSGVLNYGQGLFE 114
           E AD +DWD +GFGL PADYMY MKC+ D  F KG L R+G IE+SPS+GVLNYGQGLFE
Sbjct: 75  ELAD-IDWDTVGFGLKPADYMYVMKCNIDGEFSKGELQRFGNIEISPSAGVLNYGQGLFE 133

Query: 115 GMKAYRKEDGQ-LVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPP 173
           G+KAYRK+DG  ++LFRP++NA R++ GAERMCMP+P+++QF++AV +T LANKRWVPPP
Sbjct: 134 GLKAYRKKDGNNILLFRPEENAKRMRNGAERMCMPAPTVEQFVEAVTETVLANKRWVPPP 193

Query: 174 GKGSLYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNYFK 213
           GKGSLY+RPLL+G+G +LGLAPAPEYTF+++ SPVGNYFK
Sbjct: 194 GKGSLYVRPLLMGTGAVLGLAPAPEYTFIIYVSPVGNYFK 233

Converts 2-oxo acids to branched-chain amino acids. Acts on leucine, isoleucine and valine.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 4

EC: 2

>sp|Q93Y32|BCAT1_ARATH Branched-chain-amino-acid aminotransferase 1, mitochondrial OS=Arabidopsis thaliana GN=BCAT1 PE=1 SV=2

 Score =  246 bits (629), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 120/204 (58%), Positives = 152/204 (74%), Gaps = 6/204 (2%)

Query: 12  CLRNFSQSLRVGSAFL-KSGDFCRYTSQAAASLQQDCEPSAYSDDESADHMDWDNLGFGL 70
           CL  +S +    S++L K   F  + ++AAAS+ ++    A  +DE    +DWDNLGF L
Sbjct: 6   CLPQYSTT----SSYLSKIWGFRMHGTKAAASVVEEHVSGAEREDEEYADVDWDNLGFSL 61

Query: 71  TPADYMYTMK-CSNDYFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLF 129
              D+M+  K C +  FE+G LSRYG IEL+P++G+LNYGQGL EGMKAYR EDG+++LF
Sbjct: 62  VRTDFMFATKSCRDGNFEQGYLSRYGNIELNPAAGILNYGQGLIEGMKAYRGEDGRVLLF 121

Query: 130 RPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGKGSLYIRPLLVGSGP 189
           RP+ NA+R++ GAERMCM SPS+ QFI+ VKQT LAN+RWVPPPGKGSLY+RPLL GSG 
Sbjct: 122 RPELNAMRMKIGAERMCMHSPSVHQFIEGVKQTVLANRRWVPPPGKGSLYLRPLLFGSGA 181

Query: 190 ILGLAPAPEYTFLVFASPVGNYFK 213
            LG+A A EYTFLVF SPV NYFK
Sbjct: 182 SLGVAAASEYTFLVFGSPVQNYFK 205

Converts 2-oxo acids to branched-chain amino acids. Acts on leucine, isoleucine and valine.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 4

EC: 2

>sp|Q9LPM9|BCAT6_ARATH Branched-chain-amino-acid aminotransferase 6 OS=Arabidopsis thaliana GN=BCAT6 PE=1 SV=1

 Score =  237 bits (605), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 104/163 (63%), Positives = 134/163 (82%), Gaps = 1/163 (0%)

Query: 55  DESADHMDWDNLGFGLTPADYMYTMKC-SNDYFEKGRLSRYGKIELSPSSGVLNYGQGLF 113
           DE   ++ W+ LGF LTP DYMY  KC   + F +G++  YG I +SP S +LNYGQGLF
Sbjct: 15  DEKYANVKWEELGFALTPIDYMYVAKCRQGESFTQGKIVPYGDISISPCSPILNYGQGLF 74

Query: 114 EGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPP 173
           EG+KAYR ED ++ +FRPDQNA+R+QTGAER+CM  P+++QF++AVKQT LANK+WVPPP
Sbjct: 75  EGLKAYRTEDDRIRIFRPDQNALRMQTGAERLCMTPPTLEQFVEAVKQTVLANKKWVPPP 134

Query: 174 GKGSLYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNYFKVAA 216
           GKG+LYIRPLL+GSG  LG+APAPEYTFL++ASPVG+Y KV++
Sbjct: 135 GKGTLYIRPLLLGSGATLGVAPAPEYTFLIYASPVGDYHKVSS 177

Converts 2-oxo acids to branched-chain amino acids. Acts on leucine, isoleucine and valine.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 4

EC: 2

>sp|Q9LPM8|BCAT7_ARATH Putative branched-chain-amino-acid aminotransferase 7 OS=Arabidopsis thaliana GN=BCAT7 PE=5 SV=1

 Score =  236 bits (602), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 103/163 (63%), Positives = 129/163 (79%), Gaps = 1/163 (0%)

Query: 55  DESADHMDWDNLGFGLTPADYMYTMKCSN-DYFEKGRLSRYGKIELSPSSGVLNYGQGLF 113
           DE   ++ WD LGF L P DYMY  KC   + F  G +  YG I +SP +G+LNYGQGLF
Sbjct: 18  DEKYANVKWDELGFALVPTDYMYVAKCKQGESFSTGEIVPYGDISISPCAGILNYGQGLF 77

Query: 114 EGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPP 173
           EG+KAYR EDG++ LFRPDQNAIR+QTGA+R+CM  PS +QF++AVKQT LAN +WVPPP
Sbjct: 78  EGLKAYRTEDGRITLFRPDQNAIRMQTGADRLCMTPPSPEQFVEAVKQTVLANNKWVPPP 137

Query: 174 GKGSLYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNYFKVAA 216
           GKG+LYIRPLL+G+G +LG+A APEYTFL++ SPVGNY K ++
Sbjct: 138 GKGALYIRPLLIGTGAVLGVASAPEYTFLIYTSPVGNYHKASS 180

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LE06|BCAT4_ARATH Methionine aminotransferase BCAT4 OS=Arabidopsis thaliana GN=BCAT4 PE=1 SV=1

 Score =  207 bits (528), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 93/166 (56%), Positives = 126/166 (75%), Gaps = 2/166 (1%)

Query: 49  PSAYSDDESADHMDWDNLGFGLTPADYMYTMKCSN-DYFEKGRLSRYGKIELSPSSGVLN 107
           P + SD++ A ++ W+ L F     DYMY  KC++ + F++G++  +  ++L+P + VL 
Sbjct: 9   PVSVSDEKYA-NVKWEELAFKFVRTDYMYVAKCNHGESFQEGKILPFADLQLNPCAAVLQ 67

Query: 108 YGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANK 167
           YGQGL+EG+KAYR EDG+++LFRPDQN +RLQ GA+R+ MP PS+DQF+ A+KQ ALANK
Sbjct: 68  YGQGLYEGLKAYRTEDGRILLFRPDQNGLRLQAGADRLYMPYPSVDQFVSAIKQVALANK 127

Query: 168 RWVPPPGKGSLYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNYFK 213
           +W+PPPGKG+LYIRP+L GSGPILG  P PE TF  FA PVG Y K
Sbjct: 128 KWIPPPGKGTLYIRPILFGSGPILGSFPIPETTFTAFACPVGRYHK 173

May convert 2-oxo acids to branched-chain amino acids.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9ZJF1|ILVE_HELPJ Branched-chain-amino-acid aminotransferase OS=Helicobacter pylori (strain J99) GN=ilvE PE=3 SV=1

 Score =  146 bits (369), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 70/156 (44%), Positives = 98/156 (62%), Gaps = 1/156 (0%)

Query: 59  DHMDWDNLGFGLTPADYMYTMKCSNDYFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKA 118
           +++DW NLGF     D+ +     N  + +G L     ++LS  S VL+YGQ  FEG+KA
Sbjct: 5   ENLDWKNLGFSYIKTDFRFIATYKNGSWSQGELVSENALQLSEGSPVLHYGQACFEGLKA 64

Query: 119 YRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGKG-S 177
           YR + G+ +LFRP +NA RLQT  ER+ MP  S + F+ A  +   AN++W+ P   G S
Sbjct: 65  YRSQKGKALLFRPLENAKRLQTSCERLLMPKVSEELFLKACAEVIKANQKWLAPYKSGAS 124

Query: 178 LYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNYFK 213
           LY+RP ++G G  LG+ PA EY F+VF +PVG YFK
Sbjct: 125 LYLRPFVIGVGDNLGVKPASEYLFIVFCAPVGAYFK 160

Acts on leucine, isoleucine and valine.

Helicobacter pylori (strain J99) (taxid: 85963)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 4

EC: 2

>sp|O26004|ILVE_HELPY Branched-chain-amino-acid aminotransferase OS=Helicobacter pylori (strain ATCC 700392 / 26695) GN=ilvE PE=3 SV=1

 Score =  145 bits (365), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 70/156 (44%), Positives = 98/156 (62%), Gaps = 1/156 (0%)

Query: 59  DHMDWDNLGFGLTPADYMYTMKCSNDYFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKA 118
           +++DW NLGF     D+ +     N  + +G L     ++LS  S VL+YGQ  FEG+KA
Sbjct: 5   ENLDWKNLGFSYIKTDFRFIATYKNGSWSQGGLVSENMLQLSEGSPVLHYGQACFEGLKA 64

Query: 119 YRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGKG-S 177
           YR + G+ +LFRP +NA RLQT  ER+ MP  S + F+ A  +   AN++W+ P   G S
Sbjct: 65  YRSQKGKALLFRPLENAKRLQTSCERLLMPKVSEELFLRACAEVVKANQKWLAPYKSGAS 124

Query: 178 LYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNYFK 213
           LY+RP ++G G  LG+ PA EY F+VF +PVG YFK
Sbjct: 125 LYLRPFVIGVGDNLGVKPANEYLFIVFCAPVGAYFK 160

Acts on leucine, isoleucine and valine.

Helicobacter pylori (strain ATCC 700392 / 26695) (taxid: 85962)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 4

EC: 2

>sp|P54689|ILVE_HAEIN Branched-chain-amino-acid aminotransferase OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=ilvE PE=3 SV=1

 Score =  137 bits (345), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 65/154 (42%), Positives = 94/154 (61%), Gaps = 1/154 (0%)

Query: 61  MDWDNLGFGLTPADYMYTMKCSNDYFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYR 120
           +DW+NLGF     DY +     +  +++G+L+    + +   S  L+YGQ  FEG+KAYR
Sbjct: 4   LDWNNLGFSYIKTDYRFIAHWKDGKWDEGKLTTDSTLHIHEGSTALHYGQQCFEGLKAYR 63

Query: 121 KEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGKG-SLY 179
            +DG + LFRP  NA R+Q  A+R+ MP    + F+ A K+   AN+ W+ P G G +LY
Sbjct: 64  CKDGSINLFRPQANAERMQRTADRLLMPRVPTELFVRACKEVVKANQDWLGPYGSGATLY 123

Query: 180 IRPLLVGSGPILGLAPAPEYTFLVFASPVGNYFK 213
           +RP L+G G  +G+  APE+ F VF  PVG YFK
Sbjct: 124 LRPFLIGVGENIGVKTAPEFIFSVFCCPVGAYFK 157

Acts on leucine, isoleucine and valine.

Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) (taxid: 71421)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 4

EC: 2

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	227
302142143	387	unnamed protein product [Vitis vinifera]	0.898	0.527	0.733	5e-82
225458938	387	PREDICTED: branched-chain-amino-acid ami	0.898	0.527	0.728	2e-80
255537936	399	branched-chain amino acid aminotransfera	0.964	0.548	0.644	7e-79
449450320	390	PREDICTED: branched-chain-amino-acid ami	0.876	0.510	0.678	1e-74
14280354	385	branched-chain amino acid aminotransfera	0.867	0.511	0.660	2e-74
288310302	389	branched chain amino acid transaminase [	0.832	0.485	0.696	6e-74
407317193	393	mitochodrial branched-chain aminotransfe	0.898	0.519	0.655	9e-74
15218409	388	branched-chain-amino-acid aminotransfera	0.907	0.530	0.629	4e-73
359492522	379	PREDICTED: branched-chain-amino-acid ami	0.713	0.427	0.798	6e-73
297843816	388	ATBCAT-2 [Arabidopsis lyrata subsp. lyra	0.797	0.466	0.697	9e-73

>gi|302142143|emb|CBI19346.3| unnamed protein product [Vitis vinifera]

 Score =  309 bits (792), Expect = 5e-82,   Method: Compositional matrix adjust.
 Identities = 151/206 (73%), Positives = 167/206 (81%), Gaps = 2/206 (0%)

Query: 9   RNACLRNFSQSLRVGSAFLKSGDFCRYTSQAAASLQQDCEPSAYSDDESADHMDWDNLGF 68
           R AC RN   SLR GS   K      +TS+ A SLQ   EPS YSDDE AD +DWDNLGF
Sbjct: 4   RRACFRNLILSLRTGSTASKLRSSNCFTSRTAPSLQPLVEPSPYSDDEYAD-VDWDNLGF 62

Query: 69  GLTPADYMYTMKCSND-YFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLV 127
           GL P DYMYT KCS    FE+G LSRYG IELSPS+GVLNYGQGLFEG KAYR+E+G+L 
Sbjct: 63  GLIPTDYMYTTKCSEGGNFEEGHLSRYGNIELSPSAGVLNYGQGLFEGTKAYRRENGRLC 122

Query: 128 LFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGKGSLYIRPLLVGS 187
           LFRPDQNAIR+Q GAERMCMPSPSI  F++AVKQTALANKRW+PPPGKGSLYIRPLL+GS
Sbjct: 123 LFRPDQNAIRMQVGAERMCMPSPSIHHFVEAVKQTALANKRWIPPPGKGSLYIRPLLMGS 182

Query: 188 GPILGLAPAPEYTFLVFASPVGNYFK 213
           GP+LGL PAPE TFL++ASPVGNYFK
Sbjct: 183 GPVLGLGPAPECTFLIYASPVGNYFK 208

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225458938|ref|XP_002285511.1| PREDICTED: branched-chain-amino-acid aminotransferase 2, chloroplastic [Vitis vinifera] gi|302142142|emb|CBI19345.3| unnamed protein product [Vitis vinifera]

 Score =  303 bits (777), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 150/206 (72%), Positives = 165/206 (80%), Gaps = 2/206 (0%)

Query: 9   RNACLRNFSQSLRVGSAFLKSGDFCRYTSQAAASLQQDCEPSAYSDDESADHMDWDNLGF 68
           R AC RN  QSLR GS   K      YTS+ A SLQ   E S  SDDE AD +DWDNLGF
Sbjct: 4   RRACFRNLIQSLRTGSTASKLRSSNCYTSRTAPSLQPVVELSPDSDDEYAD-VDWDNLGF 62

Query: 69  GLTPADYMYTMKCSN-DYFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLV 127
            L P DYMY  KCS  D FE+G LSRYG IELSPS+GVLNYGQGLFEG KAYR+E+G+L 
Sbjct: 63  SLRPTDYMYITKCSGGDSFEEGHLSRYGNIELSPSAGVLNYGQGLFEGTKAYRRENGRLC 122

Query: 128 LFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGKGSLYIRPLLVGS 187
           LFRPDQNAIR+Q GAERMCMPSPSI QF++AVKQTA ANKRW+PPPGKGSLYIRPLL+GS
Sbjct: 123 LFRPDQNAIRMQAGAERMCMPSPSIHQFVEAVKQTAFANKRWIPPPGKGSLYIRPLLMGS 182

Query: 188 GPILGLAPAPEYTFLVFASPVGNYFK 213
           GP+LGL PAPE TFL++ASPVGNYFK
Sbjct: 183 GPVLGLGPAPECTFLIYASPVGNYFK 208

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255537936|ref|XP_002510033.1| branched-chain amino acid aminotransferase, putative [Ricinus communis] gi|223550734|gb|EEF52220.1| branched-chain amino acid aminotransferase, putative [Ricinus communis]

 Score =  299 bits (765), Expect = 7e-79,   Method: Compositional matrix adjust.
 Identities = 152/236 (64%), Positives = 181/236 (76%), Gaps = 17/236 (7%)

Query: 7   MIRNA-CLRNFSQSLRVGSAFLKSGDFCRYTSQAAASLQQDCEPSAY------------- 52
           MIR   CL +  QSLR+ S+  + G +  YTSQAA+S Q+  +PSA              
Sbjct: 1   MIRRGRCLHSLVQSLRISSSS-QLGAYICYTSQAASSQQRVNKPSANFIFALFLLGGSSD 59

Query: 53  SDDESADHMDWDNLGFGLTPADYMYTMKCSND-YFEKGRLSRYGKIELSPSSGVLNYGQG 111
            +DE A+ +DWDNLGFG+TP DYMY MKC+ D  F +G+LSRYG +ELSPS+GVLNYGQG
Sbjct: 60  GEDEYAN-LDWDNLGFGVTPTDYMYLMKCAKDGSFVQGQLSRYGNLELSPSAGVLNYGQG 118

Query: 112 LFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVP 171
           L+EG KAYRKEDG+L+LFRPDQNAIR+Q GA+RMCMP PSIDQF+DAVKQ A +NKRWVP
Sbjct: 119 LYEGTKAYRKEDGRLLLFRPDQNAIRMQMGADRMCMPCPSIDQFVDAVKQVAFSNKRWVP 178

Query: 172 PPGKGSLYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNYFKVAAFSHETYSGFEF 227
           PPGKG+LYIRPLL+GSGP+LGLAPAPEYTFLV+ASPVGNYFK  +     Y   EF
Sbjct: 179 PPGKGTLYIRPLLMGSGPVLGLAPAPEYTFLVYASPVGNYFKEGSAPLNLYIEEEF 234

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449450320|ref|XP_004142911.1| PREDICTED: branched-chain-amino-acid aminotransferase 2, chloroplastic-like [Cucumis sativus] gi|449494398|ref|XP_004159536.1| PREDICTED: branched-chain-amino-acid aminotransferase 2, chloroplastic-like [Cucumis sativus]

 Score =  285 bits (729), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 137/202 (67%), Positives = 162/202 (80%), Gaps = 3/202 (1%)

Query: 28  KSGDFCRYTS-QAAASLQQDCEPSAYSDDESADHMDWDNLGFGLTPADYMYTMKCSND-Y 85
           K G  CR    +A +S+ + C+ S +SDDES D  DWD+LGFGL P DYMY MKCS D  
Sbjct: 25  KLGGVCRGDGFRAVSSMPEPCQSSPFSDDESCD-FDWDSLGFGLMPTDYMYIMKCSKDGN 83

Query: 86  FEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERM 145
           FE+G++SR+G IELSPS+GVLNYGQGLFEG+KAYRK+DG   LFRPDQNA+R+ TGAERM
Sbjct: 84  FERGQMSRFGNIELSPSAGVLNYGQGLFEGLKAYRKKDGGFRLFRPDQNALRMMTGAERM 143

Query: 146 CMPSPSIDQFIDAVKQTALANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAPEYTFLVFA 205
           CMPSPSI+QFIDAVKQ  +AN+RWVPP GKGSLYIRPLL+G+GP+LGLAPAPEYTFL++A
Sbjct: 144 CMPSPSIEQFIDAVKQITIANRRWVPPLGKGSLYIRPLLIGTGPVLGLAPAPEYTFLIYA 203

Query: 206 SPVGNYFKVAAFSHETYSGFEF 227
           SPV NYFK  +     Y   EF
Sbjct: 204 SPVCNYFKEGSAPLNLYVENEF 225

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|14280354|gb|AAK57535.1| branched-chain amino acid aminotransferase [Capsicum annuum]

 Score =  284 bits (727), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 138/209 (66%), Positives = 162/209 (77%), Gaps = 12/209 (5%)

Query: 7   MIRNA-CLRNFSQSLRVGSAFLKSGDFCRYTSQAAASLQQDCEPSAYSDDESADHMDWDN 65
           MIR A C R   QS  + S F        YT+QAA       +P+ YS DE +  +DWDN
Sbjct: 1   MIRGAACFRKLFQSSALSSKFTTR----YYTAQAA------VQPAIYSSDEESGSIDWDN 50

Query: 66  LGFGLTPADYMYTMKCSND-YFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDG 124
           LGF L   DYMY  K S+D  F +G+L RYG I+LSPS+GVLNYGQGLFEG KA+R+EDG
Sbjct: 51  LGFKLMQTDYMYVTKTSDDGIFRQGQLDRYGNIQLSPSAGVLNYGQGLFEGTKAFRREDG 110

Query: 125 QLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGKGSLYIRPLL 184
           +L LFRP+QNAIR+Q GAERMCMP+PS DQF+DA+KQTAL+NKRW+PPPGKGSLYIRPLL
Sbjct: 111 RLFLFRPEQNAIRMQIGAERMCMPAPSTDQFVDALKQTALSNKRWIPPPGKGSLYIRPLL 170

Query: 185 VGSGPILGLAPAPEYTFLVFASPVGNYFK 213
           +G+GPILGLAPAPEYTFLV+A PVGNYFK
Sbjct: 171 IGTGPILGLAPAPEYTFLVYACPVGNYFK 199

Source: Capsicum annuum

Species: Capsicum annuum

Genus: Capsicum

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|288310302|gb|ADC45390.1| branched chain amino acid transaminase [Cucumis melo]

 Score =  282 bits (722), Expect = 6e-74,   Method: Compositional matrix adjust.
 Identities = 133/191 (69%), Positives = 157/191 (82%), Gaps = 2/191 (1%)

Query: 38  QAAASLQQDCEPSAYSDDESADHMDWDNLGFGLTPADYMYTMKCSND-YFEKGRLSRYGK 96
           +A +S+ + C+ S  SDDES D  DWD+LGFGL P DYMY MKCS D  FE+G++SRYG 
Sbjct: 35  RAVSSMPEPCQSSPLSDDESCD-FDWDSLGFGLMPTDYMYIMKCSKDGKFERGQMSRYGN 93

Query: 97  IELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFI 156
           IELSPS+GVLNYGQGLFEG+KAYRK+DG   LFRPDQNA+R+ TGAERMCMPSPSI+QF+
Sbjct: 94  IELSPSAGVLNYGQGLFEGLKAYRKKDGGFRLFRPDQNALRMMTGAERMCMPSPSIEQFV 153

Query: 157 DAVKQTALANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNYFKVAA 216
           DAVKQ  +AN+RWVPP GKGSLYIRPLL+G+GP+LGLAPAPEYTFL++ASPV NYFK  +
Sbjct: 154 DAVKQITIANRRWVPPLGKGSLYIRPLLIGTGPVLGLAPAPEYTFLIYASPVRNYFKEGS 213

Query: 217 FSHETYSGFEF 227
                Y   EF
Sbjct: 214 APLNLYVENEF 224

Source: Cucumis melo

Species: Cucumis melo

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|407317193|gb|AFU07634.1| mitochodrial branched-chain aminotransferase 1 [Humulus lupulus]

 Score =  282 bits (721), Expect = 9e-74,   Method: Compositional matrix adjust.
 Identities = 139/212 (65%), Positives = 167/212 (78%), Gaps = 8/212 (3%)

Query: 9   RNACLRNFSQSLRVGSAFLKSGDF---CRY---TSQAAASLQQDCEPSAYSDDESADHMD 62
           R   L N  QS RVGS+   S  F    RY   TS A +SL+Q CE S  S+ E ++ MD
Sbjct: 4   RGLWLHNLVQSYRVGSSSSSSTLFKLVYRYNSSTSLAKSSLKQSCELSCKSNTEPSN-MD 62

Query: 63  WDNLGFGLTPADYMYTMKCSND-YFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRK 121
           WD LGF L P DY+Y+MKCSN+  FE+GRL  +G IELSP++ VLNYGQG+FEG KAYRK
Sbjct: 63  WDKLGFKLMPTDYVYSMKCSNEGNFEQGRLELHGNIELSPAAAVLNYGQGIFEGTKAYRK 122

Query: 122 EDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGKGSLYIR 181
           EDG L+LFRPDQN +R++ GAERMCMPSPS+DQF+DAVKQTA+AN+RWVPP GKGSLYIR
Sbjct: 123 EDGSLLLFRPDQNGVRMRIGAERMCMPSPSVDQFVDAVKQTAIANRRWVPPSGKGSLYIR 182

Query: 182 PLLVGSGPILGLAPAPEYTFLVFASPVGNYFK 213
           PLL+G+G +LG+APAP+YTFL +ASPVGNYFK
Sbjct: 183 PLLMGTGAVLGVAPAPQYTFLAYASPVGNYFK 214

Source: Humulus lupulus

Species: Humulus lupulus

Genus: Humulus

Family: Cannabaceae

Order: Rosales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15218409|ref|NP_172478.1| branched-chain-amino-acid aminotransferase 2 [Arabidopsis thaliana] gi|79317492|ref|NP_001031015.1| branched-chain-amino-acid aminotransferase 2 [Arabidopsis thaliana] gi|26391680|sp|Q9M439.1|BCAT2_ARATH RecName: Full=Branched-chain-amino-acid aminotransferase 2, chloroplastic; Short=Atbcat-2; Flags: Precursor gi|13877745|gb|AAK43950.1|AF370135_1 putative tat-binding protein [Arabidopsis thaliana] gi|8249004|emb|CAB93128.1| branched-chain amino acid transaminase [Arabidopsis thaliana] gi|15293209|gb|AAK93715.1| putative tat-binding protein [Arabidopsis thaliana] gi|222424474|dbj|BAH20192.1| AT1G10070 [Arabidopsis thaliana] gi|332190416|gb|AEE28537.1| branched-chain-amino-acid aminotransferase 2 [Arabidopsis thaliana] gi|332190417|gb|AEE28538.1| branched-chain-amino-acid aminotransferase 2 [Arabidopsis thaliana]

 Score =  280 bits (715), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 136/216 (62%), Positives = 166/216 (76%), Gaps = 10/216 (4%)

Query: 1   MMRPATMIRNACLRNFSQSLRVGSAFLKSGDFCRYTSQAAASLQQDCEPSAYS--DDESA 58
           M++  T +R   +      +R    F K      Y +QAA++L+++ +   Y   DD  A
Sbjct: 1   MIKTITSLRKTLVLPLHLHIRTLQTFAK------YNAQAASALREERKKPLYQNGDDVYA 54

Query: 59  DHMDWDNLGFGLTPADYMYTMKCSND-YFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMK 117
           D +DWDNLGFGL PADYMY MKCS D  F +G LS YG I+LSPS+GVLNYGQ ++EG K
Sbjct: 55  D-LDWDNLGFGLNPADYMYVMKCSKDGEFTQGELSPYGNIQLSPSAGVLNYGQAIYEGTK 113

Query: 118 AYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGKGS 177
           AYRKE+G+L+LFRPD NAIR++ GAERM MPSPS+DQF++AVKQTALANKRWVPP GKG+
Sbjct: 114 AYRKENGKLLLFRPDHNAIRMKLGAERMLMPSPSVDQFVNAVKQTALANKRWVPPAGKGT 173

Query: 178 LYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNYFK 213
           LYIRPLL+GSGPILGL PAPEYTF+V+ASPVGNYFK
Sbjct: 174 LYIRPLLMGSGPILGLGPAPEYTFIVYASPVGNYFK 209

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359492522|ref|XP_002285506.2| PREDICTED: branched-chain-amino-acid aminotransferase 2, chloroplastic [Vitis vinifera]

 Score =  279 bits (714), Expect = 6e-73,   Method: Compositional matrix adjust.
 Identities = 131/164 (79%), Positives = 146/164 (89%), Gaps = 2/164 (1%)

Query: 54  DDESADHMDWDNLGFGLTPADYMYTMKCSND-YFEKGRLSRYGKIELSPSSGVLNYGQGL 112
           DDE AD +DWDNLGFGL P DYMYT KCS    FE+G LSRYG IELSPS+GVLNYGQGL
Sbjct: 42  DDEYAD-VDWDNLGFGLIPTDYMYTTKCSEGGNFEEGHLSRYGNIELSPSAGVLNYGQGL 100

Query: 113 FEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPP 172
           FEG KAYR+E+G+L LFRPDQNAIR+Q GAERMCMPSPSI  F++AVKQTALANKRW+PP
Sbjct: 101 FEGTKAYRRENGRLCLFRPDQNAIRMQVGAERMCMPSPSIHHFVEAVKQTALANKRWIPP 160

Query: 173 PGKGSLYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNYFKVAA 216
           PGKGSLYIRPLL+GSGP+LGL PAPE TFL++ASPVGNYFKV+A
Sbjct: 161 PGKGSLYIRPLLMGSGPVLGLGPAPECTFLIYASPVGNYFKVSA 204

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297843816|ref|XP_002889789.1| ATBCAT-2 [Arabidopsis lyrata subsp. lyrata] gi|297335631|gb|EFH66048.1| ATBCAT-2 [Arabidopsis lyrata subsp. lyrata]

 Score =  278 bits (712), Expect = 9e-73,   Method: Compositional matrix adjust.
 Identities = 129/185 (69%), Positives = 157/185 (84%), Gaps = 4/185 (2%)

Query: 32  FCRYTSQAAASLQQDCEPSAYS--DDESADHMDWDNLGFGLTPADYMYTMKCSN-DYFEK 88
           F +Y +QAA++L+++ +   Y   DDE  D +DWDNLGFGLTPADYMY MKCS    F +
Sbjct: 26  FAKYNAQAASALREERKTPLYQNGDDEYVD-LDWDNLGFGLTPADYMYVMKCSKVGEFTQ 84

Query: 89  GRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMP 148
           G LS YG I+LSPS+GVLNYGQ ++EG KAYRKE+G+L+LFRPD NA+R++ GAERM MP
Sbjct: 85  GELSPYGNIQLSPSAGVLNYGQAIYEGTKAYRKENGKLLLFRPDHNALRMKLGAERMLMP 144

Query: 149 SPSIDQFIDAVKQTALANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAPEYTFLVFASPV 208
           SPS+DQF++A+KQTALANKRWVPP GKG+LYIRPLL+GSGPILGL PAPEYTF+V+ASPV
Sbjct: 145 SPSVDQFVNAIKQTALANKRWVPPSGKGTLYIRPLLMGSGPILGLGPAPEYTFIVYASPV 204

Query: 209 GNYFK 213
           GNYFK
Sbjct: 205 GNYFK 209

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	227
TAIR|locus:2201921	388	BCAT-2 "branched-chain amino a	0.797	0.466	0.708	3e-69
TAIR|locus:2097320	413	BCAT3 "branched-chain aminotra	0.691	0.380	0.7	4.8e-62
TAIR|locus:2201931	384	BCAT-1 "branched-chain amino a	0.894	0.528	0.578	1.7e-59
TAIR|locus:2031030	356	AT1G50110 [Arabidopsis thalian	0.713	0.455	0.638	1.4e-57
TAIR|locus:2031040	367	BCAT7 "branched-chain amino ac	0.779	0.482	0.597	1.7e-57
TAIR|locus:2091216	354	BCAT4 "branched-chain aminotra	0.722	0.463	0.560	1.1e-50
UNIPROTKB|A0R066	368	ilvE "Branched-chain-amino-aci	0.656	0.404	0.437	3e-30
UNIPROTKB|Q10399	368	ilvE "Branched-chain-amino-aci	0.647	0.399	0.422	5.7e-27
TIGR_CMR|GSU_0656	357	GSU_0656 "branched-chain amino	0.687	0.436	0.391	5.2e-26
ZFIN|ZDB-GENE-030131-9358	385	bcat1 "branched chain aminotra	0.682	0.402	0.371	2.3e-23

TAIR|locus:2201921 BCAT-2 "branched-chain amino acid transaminase 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 702 (252.2 bits), Expect = 3.0e-69, P = 3.0e-69
 Identities = 131/185 (70%), Positives = 157/185 (84%)

Query:    32 FCRYTSQAAASLQQDCEPSAYS--DDESADHMDWDNLGFGLTPADYMYTMKCSND-YFEK 88
             F +Y +QAA++L+++ +   Y   DD  AD +DWDNLGFGL PADYMY MKCS D  F +
Sbjct:    26 FAKYNAQAASALREERKKPLYQNGDDVYAD-LDWDNLGFGLNPADYMYVMKCSKDGEFTQ 84

Query:    89 GRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMP 148
             G LS YG I+LSPS+GVLNYGQ ++EG KAYRKE+G+L+LFRPD NAIR++ GAERM MP
Sbjct:    85 GELSPYGNIQLSPSAGVLNYGQAIYEGTKAYRKENGKLLLFRPDHNAIRMKLGAERMLMP 144

Query:   149 SPSIDQFIDAVKQTALANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAPEYTFLVFASPV 208
             SPS+DQF++AVKQTALANKRWVPP GKG+LYIRPLL+GSGPILGL PAPEYTF+V+ASPV
Sbjct:   145 SPSVDQFVNAVKQTALANKRWVPPAGKGTLYIRPLLMGSGPILGLGPAPEYTFIVYASPV 204

Query:   209 GNYFK 213
             GNYFK
Sbjct:   205 GNYFK 209

GO:0003824 "catalytic activity" evidence=IEA;ISS

GO:0004084 "branched-chain-amino-acid transaminase activity" evidence=IEA;IGI

GO:0005737 "cytoplasm" evidence=ISM

GO:0005739 "mitochondrion" evidence=ISM

GO:0008152 "metabolic process" evidence=IEA

GO:0009081 "branched-chain amino acid metabolic process" evidence=IEA

GO:0009507 "chloroplast" evidence=IDA

GO:0009407 "toxin catabolic process" evidence=RCA

GO:0009744 "response to sucrose stimulus" evidence=RCA

GO:0009750 "response to fructose stimulus" evidence=RCA

TAIR|locus:2097320 BCAT3 "branched-chain aminotransferase 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 634 (228.2 bits), Expect = 4.8e-62, P = 4.8e-62
 Identities = 112/160 (70%), Positives = 140/160 (87%)

Query:    56 ESADHMDWDNLGFGLTPADYMYTMKCSND-YFEKGRLSRYGKIELSPSSGVLNYGQGLFE 114
             E AD +DWD +GFGL PADYMY MKC+ D  F KG L R+G IE+SPS+GVLNYGQGLFE
Sbjct:    75 ELAD-IDWDTVGFGLKPADYMYVMKCNIDGEFSKGELQRFGNIEISPSAGVLNYGQGLFE 133

Query:   115 GMKAYRKEDGQ-LVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPP 173
             G+KAYRK+DG  ++LFRP++NA R++ GAERMCMP+P+++QF++AV +T LANKRWVPPP
Sbjct:   134 GLKAYRKKDGNNILLFRPEENAKRMRNGAERMCMPAPTVEQFVEAVTETVLANKRWVPPP 193

Query:   174 GKGSLYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNYFK 213
             GKGSLY+RPLL+G+G +LGLAPAPEYTF+++ SPVGNYFK
Sbjct:   194 GKGSLYVRPLLMGTGAVLGLAPAPEYTFIIYVSPVGNYFK 233

GO:0003824 "catalytic activity" evidence=IEA;ISS

GO:0004084 "branched-chain-amino-acid transaminase activity" evidence=IEA;IGI

GO:0008152 "metabolic process" evidence=IEA

GO:0009081 "branched-chain amino acid metabolic process" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0009570 "chloroplast stroma" evidence=IDA

GO:0005829 "cytosol" evidence=RCA

GO:0009407 "toxin catabolic process" evidence=RCA

GO:0019932 "second-messenger-mediated signaling" evidence=RCA

TAIR|locus:2201931 BCAT-1 "branched-chain amino acid transaminase 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 610 (219.8 bits), Expect = 1.7e-59, P = 1.7e-59
 Identities = 121/209 (57%), Positives = 153/209 (73%)

Query:     7 MIRNACLRNFSQSLRVGSAFL-KSGDFCRYTSQAAASLQQDCEPSAYSDDESADHMDWDN 65
             M    CL  +S +    S++L K   F  + ++AAAS+ ++    A  +DE    +DWDN
Sbjct:     1 MALRRCLPQYSTT----SSYLSKIWGFRMHGTKAAASVVEEHVSGAEREDEEYADVDWDN 56

Query:    66 LGFGLTPADYMYTMK-CSNDYFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDG 124
             LGF L   D+M+  K C +  FE+G LSRYG IEL+P++G+LNYGQGL EGMKAYR EDG
Sbjct:    57 LGFSLVRTDFMFATKSCRDGNFEQGYLSRYGNIELNPAAGILNYGQGLIEGMKAYRGEDG 116

Query:   125 QLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGKGSLYIRPLL 184
             +++LFRP+ NA+R++ GAERMCM SPS+ QFI+ VKQT LAN+RWVPPPGKGSLY+RPLL
Sbjct:   117 RVLLFRPELNAMRMKIGAERMCMHSPSVHQFIEGVKQTVLANRRWVPPPGKGSLYLRPLL 176

Query:   185 VGSGPILGLAPAPEYTFLVFASPVGNYFK 213
              GSG  LG+A A EYTFLVF SPV NYFK
Sbjct:   177 FGSGASLGVAAASEYTFLVFGSPVQNYFK 205

GO:0003824 "catalytic activity" evidence=IEA;ISS

GO:0004084 "branched-chain-amino-acid transaminase activity" evidence=IEA;IGI;IDA

GO:0005737 "cytoplasm" evidence=ISM

GO:0005739 "mitochondrion" evidence=ISM;IDA

GO:0008152 "metabolic process" evidence=IEA

GO:0009081 "branched-chain amino acid metabolic process" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0009407 "toxin catabolic process" evidence=RCA

TAIR|locus:2031030 AT1G50110 [Arabidopsis thaliana (taxid:3702)]

 Score = 592 (213.5 bits), Expect = 1.4e-57, P = 1.4e-57
 Identities = 104/163 (63%), Positives = 134/163 (82%)

Query:    55 DESADHMDWDNLGFGLTPADYMYTMKC-SNDYFEKGRLSRYGKIELSPSSGVLNYGQGLF 113
             DE   ++ W+ LGF LTP DYMY  KC   + F +G++  YG I +SP S +LNYGQGLF
Sbjct:    15 DEKYANVKWEELGFALTPIDYMYVAKCRQGESFTQGKIVPYGDISISPCSPILNYGQGLF 74

Query:   114 EGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPP 173
             EG+KAYR ED ++ +FRPDQNA+R+QTGAER+CM  P+++QF++AVKQT LANK+WVPPP
Sbjct:    75 EGLKAYRTEDDRIRIFRPDQNALRMQTGAERLCMTPPTLEQFVEAVKQTVLANKKWVPPP 134

Query:   174 GKGSLYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNYFKVAA 216
             GKG+LYIRPLL+GSG  LG+APAPEYTFL++ASPVG+Y KV++
Sbjct:   135 GKGTLYIRPLLLGSGATLGVAPAPEYTFLIYASPVGDYHKVSS 177

GO:0003824 "catalytic activity" evidence=IEA;ISS

GO:0004084 "branched-chain-amino-acid transaminase activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008152 "metabolic process" evidence=IEA

GO:0009081 "branched-chain amino acid metabolic process" evidence=IEA

GO:0006084 "acetyl-CoA metabolic process" evidence=RCA

GO:0009407 "toxin catabolic process" evidence=RCA

TAIR|locus:2031040 BCAT7 "branched-chain amino acid transaminase 7" [Arabidopsis thaliana (taxid:3702)]

 Score = 591 (213.1 bits), Expect = 1.7e-57, P = 1.7e-57
 Identities = 107/179 (59%), Positives = 134/179 (74%)

Query:    40 AASLQQDCEPSAYSD-DESADHMDWDNLGFGLTPADYMYTMKCSN-DYFEKGRLSRYGKI 97
             A S+     P   S  DE   ++ WD LGF L P DYMY  KC   + F  G +  YG I
Sbjct:     2 APSVHPSSSPLFTSKADEKYANVKWDELGFALVPTDYMYVAKCKQGESFSTGEIVPYGDI 61

Query:    98 ELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFID 157
              +SP +G+LNYGQGLFEG+KAYR EDG++ LFRPDQNAIR+QTGA+R+CM  PS +QF++
Sbjct:    62 SISPCAGILNYGQGLFEGLKAYRTEDGRITLFRPDQNAIRMQTGADRLCMTPPSPEQFVE 121

Query:   158 AVKQTALANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNYFKVAA 216
             AVKQT LAN +WVPPPGKG+LYIRPLL+G+G +LG+A APEYTFL++ SPVGNY K ++
Sbjct:   122 AVKQTVLANNKWVPPPGKGALYIRPLLIGTGAVLGVASAPEYTFLIYTSPVGNYHKASS 180

GO:0003824 "catalytic activity" evidence=IEA;ISS

GO:0004084 "branched-chain-amino-acid transaminase activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008152 "metabolic process" evidence=IEA

GO:0009081 "branched-chain amino acid metabolic process" evidence=IEA

GO:0009407 "toxin catabolic process" evidence=RCA

TAIR|locus:2091216 BCAT4 "branched-chain aminotransferase4" [Arabidopsis thaliana (taxid:3702)]

 Score = 527 (190.6 bits), Expect = 1.1e-50, P = 1.1e-50
 Identities = 93/166 (56%), Positives = 126/166 (75%)

Query:    49 PSAYSDDESADHMDWDNLGFGLTPADYMYTMKCSN-DYFEKGRLSRYGKIELSPSSGVLN 107
             P + SD++ A+ + W+ L F     DYMY  KC++ + F++G++  +  ++L+P + VL 
Sbjct:     9 PVSVSDEKYAN-VKWEELAFKFVRTDYMYVAKCNHGESFQEGKILPFADLQLNPCAAVLQ 67

Query:   108 YGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANK 167
             YGQGL+EG+KAYR EDG+++LFRPDQN +RLQ GA+R+ MP PS+DQF+ A+KQ ALANK
Sbjct:    68 YGQGLYEGLKAYRTEDGRILLFRPDQNGLRLQAGADRLYMPYPSVDQFVSAIKQVALANK 127

Query:   168 RWVPPPGKGSLYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNYFK 213
             +W+PPPGKG+LYIRP+L GSGPILG  P PE TF  FA PVG Y K
Sbjct:   128 KWIPPPGKGTLYIRPILFGSGPILGSFPIPETTFTAFACPVGRYHK 173

GO:0003824 "catalytic activity" evidence=IEA;ISS

GO:0004084 "branched-chain-amino-acid transaminase activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0005829 "cytosol" evidence=IDA

GO:0009416 "response to light stimulus" evidence=IEP

GO:0009611 "response to wounding" evidence=IEP

GO:0010326 "methionine-oxo-acid transaminase activity" evidence=IDA

GO:0019761 "glucosinolate biosynthetic process" evidence=RCA;IMP

GO:0009407 "toxin catabolic process" evidence=RCA

GO:0009684 "indoleacetic acid biosynthetic process" evidence=RCA

GO:0019344 "cysteine biosynthetic process" evidence=RCA

UNIPROTKB|A0R066 ilvE "Branched-chain-amino-acid aminotransferase" [Mycobacterium smegmatis str. MC2 155 (taxid:246196)]

 Score = 334 (122.6 bits), Expect = 3.0e-30, P = 3.0e-30
 Identities = 66/151 (43%), Positives = 100/151 (66%)

Query:    65 NLGFGLTPADYMYTMKCSNDY-FEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKED 123
             N GFG    D+M ++  + D  +   ++  YG I+L PS+ VL+YGQ +FEG+KAYR  D
Sbjct:    28 NPGFGKYYTDHMVSIDYTVDEGWHNAQVIPYGPIQLDPSAIVLHYGQEIFEGLKAYRWAD 87

Query:   124 GQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPG-KGSLYIRP 182
             G +V FRP+ NA RLQ+ A R+ +P    + FI++++Q    +++WVPP G + SLY+RP
Sbjct:    88 GSIVSFRPEANAARLQSSARRLAIPELPEEVFIESLRQLIAVDEKWVPPAGGEESLYLRP 147

Query:   183 LLVGSGPILGLAPAPEYTFLVFASPVGNYFK 213
              ++ + P LG+ P+ EY +L+ ASP G YFK
Sbjct:   148 FVIATEPGLGVRPSNEYRYLLIASPAGAYFK 178

GO:0004084 "branched-chain-amino-acid transaminase activity" evidence=IDA

GO:0009081 "branched-chain amino acid metabolic process" evidence=IDA

GO:0018272 "protein-pyridoxal-5-phosphate linkage via peptidyl-N6-pyridoxal phosphate-L-lysine" evidence=IDA

GO:0030170 "pyridoxal phosphate binding" evidence=IDA

UNIPROTKB|Q10399 ilvE "Branched-chain-amino-acid aminotransferase" [Mycobacterium tuberculosis (taxid:1773)]

 Score = 303 (111.7 bits), Expect = 5.7e-27, P = 5.7e-27
 Identities = 63/149 (42%), Positives = 92/149 (61%)

Query:    67 GFGLTPADYMYTMKCSNDY-FEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQ 125
             GFG    D+M ++  +    +   R+  YG IEL PS+ VL+Y Q +FEG+KAYR  DG 
Sbjct:    30 GFGKYHTDHMVSIDYAEGRGWHNARVIPYGPIELDPSAIVLHYAQEVFEGLKAYRWADGS 89

Query:   126 LVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPG-KGSLYIRPLL 184
             +V FR D NA RL++ A R+ +P      FI++++Q    +K WVP  G + +LY+RP +
Sbjct:    90 IVSFRADANAARLRSSARRLAIPELPDAVFIESLRQLIAVDKAWVPGAGGEEALYLRPFI 149

Query:   185 VGSGPILGLAPAPEYTFLVFASPVGNYFK 213
               + P LG+ PA +Y +L+ ASP G YFK
Sbjct:   150 FATEPGLGVRPATQYRYLLIASPAGAYFK 178

GO:0004084 "branched-chain-amino-acid transaminase activity" evidence=IDA

GO:0009081 "branched-chain amino acid metabolic process" evidence=IDA

GO:0009082 "branched-chain amino acid biosynthetic process" evidence=IDA

GO:0018272 "protein-pyridoxal-5-phosphate linkage via peptidyl-N6-pyridoxal phosphate-L-lysine" evidence=IDA

GO:0030170 "pyridoxal phosphate binding" evidence=IDA

GO:0040007 "growth" evidence=IMP

GO:0042803 "protein homodimerization activity" evidence=IPI

GO:0071267 "L-methionine salvage" evidence=IDA

TIGR_CMR|GSU_0656 GSU_0656 "branched-chain amino acid aminotransferase" [Geobacter sulfurreducens PCA (taxid:243231)]

 Score = 294 (108.6 bits), Expect = 5.2e-26, P = 5.2e-26
 Identities = 63/161 (39%), Positives = 82/161 (50%)

Query:    56 ESADHMDWDN--LGFGLTPADYMYTM--KCSNDYFEKGRLSRYGKIELSPSSGVLNYGQG 111
             E   H   D   LGFG    D M     K    + +  R+  Y    L P+  V +Y Q 
Sbjct:    11 EQKKHKATDETALGFGRLFTDRMLVAEWKVGQGWVD-ARIEPYAPFSLDPACAVFHYAQE 69

Query:   112 LFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVP 171
             +FEG+KAY+  DG + LFRP+ NA R    AER+CMP    D FI  ++Q     + W+P
Sbjct:    70 IFEGLKAYKWADGSIALFRPEMNARRFNHSAERLCMPEVPEDLFIGGIEQLVALERDWIP 129

Query:   172 PPGKGSLYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNYF 212
                  SLYIRP ++   P LG+ PA  Y F V  SPVG Y+
Sbjct:   130 ASAGTSLYIRPAMIAVEPALGVKPADHYYFFVILSPVGAYY 170

GO:0004084 "branched-chain-amino-acid transaminase activity" evidence=ISS

GO:0009082 "branched-chain amino acid biosynthetic process" evidence=ISS

ZFIN|ZDB-GENE-030131-9358 bcat1 "branched chain aminotransferase 1, cytosolic" [Danio rerio (taxid:7955)]

 Score = 269 (99.8 bits), Expect = 2.3e-23, P = 2.3e-23
 Identities = 58/156 (37%), Positives = 84/156 (53%)

Query:    62 DWDNLGFGLTPADYMYTMKCS-NDYFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYR 120
             D + L FG    D+M T+K S  + ++K  +  +G + + P    L+Y   LFEGMKAYR
Sbjct:    44 DPNGLVFGSVFTDHMLTIKWSLQEGWQKPHIQPFGNLSMHPGCSALHYAIQLFEGMKAYR 103

Query:   121 KEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGKGSLYI 180
               D ++ LFRP  N  R+   A R C+PS    + ++ +K+    ++ WVP     SLYI
Sbjct:   104 GPDNKVRLFRPMLNMKRMLKSAHRACLPSFDCAELMECIKKLVDLDQDWVPHSDSASLYI 163

Query:   181 RPLLVGSGPILGLAPAPEYTFLVFASPVGNYFKVAA 216
             RP L+G+ P LG+         V  SPVG+YF   A
Sbjct:   164 RPTLLGTEPTLGVKKPSSALLFVILSPVGSYFSTGA 199

GO:0004084 "branched-chain-amino-acid transaminase activity" evidence=IEA

GO:0009081 "branched-chain amino acid metabolic process" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0052654 "L-leucine transaminase activity" evidence=IEA

GO:0052655 "L-valine transaminase activity" evidence=IEA

GO:0052656 "L-isoleucine transaminase activity" evidence=IEA

GO:0008483 "transaminase activity" evidence=IEA

GO:0008652 "cellular amino acid biosynthetic process" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0009082 "branched-chain amino acid biosynthetic process" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	2.6.1	0.766
4th Layer	2.6.1.42	0.824

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	227
PLN02782	403	PLN02782, PLN02782, Branched-chain amino acid amin	1e-103
PLN02259	388	PLN02259, PLN02259, branched-chain-amino-acid amin	2e-94
PLN03117	355	PLN03117, PLN03117, Branched-chain-amino-acid amin	1e-88
PLN02883	384	PLN02883, PLN02883, Branched-chain amino acid amin	5e-81
PRK13357	356	PRK13357, PRK13357, branched-chain amino acid amin	2e-76
cd01557	279	cd01557, BCAT_beta_family, BCAT_beta_family: Branc	1e-54
TIGR01123	313	TIGR01123, ilvE_II, branched-chain amino acid amin	2e-53
COG0115	284	COG0115, IlvE, Branched-chain amino acid aminotran	2e-30
cd00449	256	cd00449, PLPDE_IV, PyridoxaL 5'-Phosphate Dependen	1e-27
TIGR01122	298	TIGR01122, ilvE_I, branched-chain amino acid amino	2e-11
PRK06606	306	PRK06606, PRK06606, branched-chain amino acid amin	1e-10
cd01559	249	cd01559, ADCL_like, ADCL_like: 4-Amino-4-deoxychor	7e-06
PRK08320	288	PRK08320, PRK08320, branched-chain amino acid amin	2e-04
PRK06092	268	PRK06092, PRK06092, 4-amino-4-deoxychorismate lyas	7e-04
TIGR03461	261	TIGR03461, pabC_Proteo, aminodeoxychorismate lyase	0.001
cd01558	270	cd01558, D-AAT_like, D-Alanine aminotransferase (D	0.004

>gnl|CDD|215418 PLN02782, PLN02782, Branched-chain amino acid aminotransferase

 Score =  303 bits (778), Expect = e-103
 Identities = 124/197 (62%), Positives = 152/197 (77%), Gaps = 8/197 (4%)

Query: 18  QSLRVGSAFLKSGDFCRYTSQAAASLQQDCEPSAYSDDESADHMDWDNLGFGLTPADYMY 77
            +  V S  + S         A +S       S+Y++      +DWDNLGFGL P DYMY
Sbjct: 34  SNSSVSSNPISSKAISLTRCDAVSS-------SSYTEVTELADIDWDNLGFGLVPTDYMY 86

Query: 78  TMKCSND-YFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAI 136
            MKC+ D  F KG L R+G IELSPS+GVLNYGQGLFEG+KAYRKEDG ++LFRP++NAI
Sbjct: 87  IMKCNRDGEFSKGELQRFGNIELSPSAGVLNYGQGLFEGLKAYRKEDGNILLFRPEENAI 146

Query: 137 RLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGKGSLYIRPLLVGSGPILGLAPA 196
           R++ GAERMCMP+P+++QF++AVK+T LANKRWVPPPGKGSLYIRPLL+GSG +LGLAPA
Sbjct: 147 RMRNGAERMCMPAPTVEQFVEAVKETVLANKRWVPPPGKGSLYIRPLLMGSGAVLGLAPA 206

Query: 197 PEYTFLVFASPVGNYFK 213
           PEYTFL++ SPVGNYFK
Sbjct: 207 PEYTFLIYVSPVGNYFK 223

Length = 403

>gnl|CDD|177901 PLN02259, PLN02259, branched-chain-amino-acid aminotransferase 2

 Score =  281 bits (719), Expect = 2e-94
 Identities = 130/185 (70%), Positives = 156/185 (84%), Gaps = 4/185 (2%)

Query: 32  FCRYTSQAAASLQQDCEPSAYS--DDESADHMDWDNLGFGLTPADYMYTMKCSN-DYFEK 88
           F +Y +QAA++L+++ +   Y   DD  AD +DWDNLGFGL PADYMY MKCS    F +
Sbjct: 26  FAKYNAQAASALREERKKPLYQNGDDVYAD-LDWDNLGFGLNPADYMYVMKCSKDGEFTQ 84

Query: 89  GRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMP 148
           G LS YG I+LSPS+GVLNYGQ ++EG KAYRKE+G+L+LFRPD NAIR++ GAERM MP
Sbjct: 85  GELSPYGNIQLSPSAGVLNYGQAIYEGTKAYRKENGKLLLFRPDHNAIRMKLGAERMLMP 144

Query: 149 SPSIDQFIDAVKQTALANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAPEYTFLVFASPV 208
           SPS+DQF++AVKQTALANKRWVPP GKG+LYIRPLL+GSGPILGL PAPEYTF+V+ASPV
Sbjct: 145 SPSVDQFVNAVKQTALANKRWVPPAGKGTLYIRPLLMGSGPILGLGPAPEYTFIVYASPV 204

Query: 209 GNYFK 213
           GNYFK
Sbjct: 205 GNYFK 209

Length = 388

>gnl|CDD|178664 PLN03117, PLN03117, Branched-chain-amino-acid aminotransferase; Provisional

 Score =  265 bits (678), Expect = 1e-88
 Identities = 105/163 (64%), Positives = 135/163 (82%), Gaps = 1/163 (0%)

Query: 55  DESADHMDWDNLGFGLTPADYMYTMKCSN-DYFEKGRLSRYGKIELSPSSGVLNYGQGLF 113
           DE   ++ W+ LGF L P DYMY  KC   + F +G++  YG I +SP +G+LNYGQGLF
Sbjct: 14  DEKYANVKWEELGFALVPTDYMYVAKCKQGESFSEGKIVPYGDISISPCAGILNYGQGLF 73

Query: 114 EGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPP 173
           EG+KAYR EDG++ LFRPDQNA+R+QTGA+R+CM  PS++QF++AVKQT LANK+WVPPP
Sbjct: 74  EGLKAYRTEDGRITLFRPDQNALRMQTGADRLCMTPPSLEQFVEAVKQTVLANKKWVPPP 133

Query: 174 GKGSLYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNYFKVAA 216
           GKG+LYIRPLL+GSG +LG+APAPEYTFL++ASPVGNY K ++
Sbjct: 134 GKGTLYIRPLLIGSGAVLGVAPAPEYTFLIYASPVGNYHKASS 176

Length = 355

>gnl|CDD|178471 PLN02883, PLN02883, Branched-chain amino acid aminotransferase

 Score =  246 bits (630), Expect = 5e-81
 Identities = 120/208 (57%), Positives = 149/208 (71%), Gaps = 4/208 (1%)

Query: 7   MIRNACLRNFSQSLRVGSAFLKSGDFCRYTSQAAASLQQDCEPSAYSDDESADHMDWDNL 66
           M    CL   S +    S   K   F  + ++AAAS+ ++    A  +DE    +DWD L
Sbjct: 1   MALRRCLPQSSTT---SSYLSKIWGFRMHGTKAAASVVEEHVSGAEREDEEYADVDWDKL 57

Query: 67  GFGLTPADYMYTMK-CSNDYFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQ 125
           GF L   D+M+  K C +  FE+G LSRYG IEL+P++G+LNYGQGL EGMKAYR EDG+
Sbjct: 58  GFSLVRTDFMFATKSCRDGNFEQGYLSRYGNIELNPAAGILNYGQGLIEGMKAYRGEDGR 117

Query: 126 LVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGKGSLYIRPLLV 185
           ++LFRP+ NA+R++ GAERMCM SPS+ QFI+ VKQT LAN+RWVPPPGKGSLY+RPLL 
Sbjct: 118 ILLFRPELNAMRMKIGAERMCMHSPSVHQFIEGVKQTVLANRRWVPPPGKGSLYLRPLLF 177

Query: 186 GSGPILGLAPAPEYTFLVFASPVGNYFK 213
           GSG  LG+A APEYTFLVF SPV NYFK
Sbjct: 178 GSGASLGVAAAPEYTFLVFGSPVQNYFK 205

Length = 384

>gnl|CDD|237363 PRK13357, PRK13357, branched-chain amino acid aminotransferase; Provisional

 Score =  233 bits (598), Expect = 2e-76
 Identities = 79/153 (51%), Positives = 104/153 (67%), Gaps = 1/153 (0%)

Query: 62  DWDNLGFGLTPADYMYTMKCSNDYFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRK 121
           DW NLGFG    D+M  +   +  +   RL  YG +EL P++ VL+YGQ +FEG+KAYR 
Sbjct: 18  DWANLGFGYVFTDHMVVIDYKDGKWHDARLVPYGPLELDPAATVLHYGQEIFEGLKAYRH 77

Query: 122 EDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGKG-SLYI 180
           +DG +VLFRPD NA RLQ  A+R+ MP    + F++AVKQ   A++ WVPP G+G SLY+
Sbjct: 78  KDGSIVLFRPDANAKRLQRSADRLLMPELPEELFLEAVKQLVKADRDWVPPYGEGASLYL 137

Query: 181 RPLLVGSGPILGLAPAPEYTFLVFASPVGNYFK 213
           RP ++ + P LG+ PA EY F V ASPVG YFK
Sbjct: 138 RPFMIATEPFLGVKPAEEYIFCVIASPVGAYFK 170

Length = 356

>gnl|CDD|238798 cd01557, BCAT_beta_family, BCAT_beta_family: Branched-chain aminotransferase catalyses the transamination of the branched-chain amino acids leusine, isoleucine and valine to their respective alpha-keto acids, alpha-ketoisocaproate, alpha-keto-beta-methylvalerate and alpha-ketoisovalerate

 Score =  175 bits (446), Expect = 1e-54
 Identities = 63/116 (54%), Positives = 83/116 (71%)

Query: 98  ELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFID 157
            L P++  L+YGQ +FEG+KAYR  DG++VLFRPD+NA RL   A R+ +P  S+++FID
Sbjct: 1   SLHPATHALHYGQAVFEGLKAYRTPDGKIVLFRPDENAERLNRSARRLGLPPFSVEEFID 60

Query: 158 AVKQTALANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNYFK 213
           A+K+    +  WVP  G  SLYIRP + G+ P LG++PA EY F VFASPVG YFK
Sbjct: 61  AIKELVKLDADWVPYGGGASLYIRPFIFGTDPQLGVSPALEYLFAVFASPVGAYFK 116

The enzyme requires pyridoxal 5'-phosphate (PLP) as a cofactor to catalyze the reaction. It has been found that mammals have two foms of the enzyme - mitochondrial and cytosolic forms while bacteria contain only one form of the enzyme. The mitochondrial form plays a significant role in skeletal muscle glutamine and alanine synthesis and in interorgan nitrogen metabolism.Members of this subgroup are widely distributed in all three forms of life. Length = 279

>gnl|CDD|233278 TIGR01123, ilvE_II, branched-chain amino acid aminotransferase, group II

 Score =  173 bits (441), Expect = 2e-53
 Identities = 73/127 (57%), Positives = 90/127 (70%), Gaps = 1/127 (0%)

Query: 89  GRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMP 148
           GRL+ YG + L P S VL+YGQ  FEG+KAYR  DG +VLFRPD NA RL+  A R+ MP
Sbjct: 4   GRLTPYGPLHLDPGSTVLHYGQECFEGLKAYRCADGSIVLFRPDANAARLRRSARRLLMP 63

Query: 149 SPSIDQFIDAVKQTALANKRWVPPPGKG-SLYIRPLLVGSGPILGLAPAPEYTFLVFASP 207
               + F++A++Q   ANK WVPP G G SLY+RP ++G+ P LG+ PAPEY F VFASP
Sbjct: 64  ELPDELFLEALRQLVKANKDWVPPYGSGASLYLRPFVIGTEPNLGVRPAPEYLFYVFASP 123

Query: 208 VGNYFKV 214
           VG YFK 
Sbjct: 124 VGAYFKG 130

Among the class IV aminotransferases are two phylogenetically separable groups of branched-chain amino acid aminotransferase (IlvE). The last common ancestor of the two lineages appears also to have given rise to a family of D-amino acid aminotransferases (DAAT). This model represents the IlvE family less similar to the DAAT family [Amino acid biosynthesis, Pyruvate family]. Length = 313

>gnl|CDD|223193 COG0115, IlvE, Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase [Amino acid transport and metabolism / Coenzyme metabolism]

 Score =  113 bits (284), Expect = 2e-30
 Identities = 49/126 (38%), Positives = 68/126 (53%), Gaps = 10/126 (7%)

Query: 88  KGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCM 147
            G L      +LS     L+YG G+FE ++AY  +     LFR D++  RL+  A+R+ +
Sbjct: 7   NGELVPEEDAKLSVLDRGLHYGDGVFETLRAYNGK-----LFRLDEHLARLKRSAKRLGL 61

Query: 148 PSPSIDQFIDAVKQTALANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAPEYTFLVFASP 207
           P P  ++ I+ + Q  LA    VP      LYIRPL+ G G  LG+  A E T +V ASP
Sbjct: 62  PRPESEEEIELLIQLLLAKNNLVPG-----LYIRPLVRGGGGGLGVRDATEPTLIVAASP 116

Query: 208 VGNYFK 213
           VG Y K
Sbjct: 117 VGAYLK 122

Length = 284

>gnl|CDD|238254 cd00449, PLPDE_IV, PyridoxaL 5'-Phosphate Dependent Enzymes class IV (PLPDE_IV)

 Score =  104 bits (263), Expect = 1e-27
 Identities = 47/115 (40%), Positives = 64/115 (55%), Gaps = 15/115 (13%)

Query: 105 VLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSP-SIDQFIDAVKQTA 163
            L+YG G+FEG++A +       LFR D++  RL   A+R+ +P P   ++  +A+K+  
Sbjct: 3   GLHYGDGVFEGLRAGK-----GRLFRLDEHLDRLNRSAKRLGLPIPYDREELREALKELV 57

Query: 164 LANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAP--EYTFLVFASPVGNYFKVAA 216
            AN          SLYIRPLL      LG+AP P  E TF+VFASPVG Y K   
Sbjct: 58  AANN-------GASLYIRPLLTRGVGGLGVAPPPSPEPTFVVFASPVGAYAKGGE 105

This D-amino acid superfamily, one of five classes of PLPDE, consists of branched-chain amino acid aminotransferases (BCAT), D-amino acid transferases (DAAT), and 4-amino-4-deoxychorismate lyases (ADCL). BCAT catalyzes the reversible transamination reaction between the L-branched-chain amino and alpha-keto acids. DAAT catalyzes the synthesis of D-glutamic acid and D-alanine, and ADCL converts 4-amino-4-deoxychorismate to p-aminobenzoate and pyruvate. Except for a few enzymes, i. e., Escherichia coli and Salmonella BCATs, which are homohexamers arranged as a double trimer, the class IV PLPDEs are homodimers. Homodimer formation is required for catalytic activity. Length = 256

>gnl|CDD|130192 TIGR01122, ilvE_I, branched-chain amino acid aminotransferase, group I

 Score = 61.6 bits (150), Expect = 2e-11
 Identities = 38/111 (34%), Positives = 56/111 (50%), Gaps = 13/111 (11%)

Query: 105 VLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSP-SIDQFIDAVKQTA 163
            L+YG G+FEG++AY  + G   +FR  ++  RL   A+   M  P S ++ ++A ++T 
Sbjct: 20  ALHYGTGVFEGIRAYDTDKG-PAIFRLKEHIQRLYDSAKIYRMEIPYSKEELMEATRETL 78

Query: 164 LANKRWVPPPGKGSLYIRPLL-VGSGPILGLAPAPEYT--FLVFASPVGNY 211
             N          S YIRPL+  G G  LGL P   Y    ++ A P G Y
Sbjct: 79  RKN-------NLRSAYIRPLVFRGDGD-LGLNPRAGYKPDVIIAAWPWGAY 121

Among the class IV aminotransferases are two phylogenetically separable groups of branched-chain amino acid aminotransferase (IlvE). The last common ancestor of the two lineages appears also to have given rise to a family of D-amino acid aminotransferases (DAAT). This model represents the IlvE family more strongly similar to the DAAT family [Amino acid biosynthesis, Pyruvate family]. Length = 298

>gnl|CDD|235841 PRK06606, PRK06606, branched-chain amino acid aminotransferase; Validated

 Score = 59.4 bits (145), Expect = 1e-10
 Identities = 36/111 (32%), Positives = 53/111 (47%), Gaps = 16/111 (14%)

Query: 106 LNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSP-SIDQFIDAVKQTAL 164
           L+YG G+FEG++AY    G  + FR  ++  RL   A+ + M  P S+D+ ++A ++   
Sbjct: 30  LHYGTGVFEGIRAYDTPKGPAI-FRLREHTKRLFNSAKILRMEIPYSVDELMEAQREVVR 88

Query: 165 ANKRWVPPPGKGSLYIRPLL-VGSGPILGLAPAPEYT---FLVFASPVGNY 211
            N          S YIRPL+ VG     GL   P        + A P G Y
Sbjct: 89  KNNL-------KSAYIRPLVFVGDE---GLGVRPHGLPTDVAIAAWPWGAY 129

Length = 306

>gnl|CDD|238800 cd01559, ADCL_like, ADCL_like: 4-Amino-4-deoxychorismate lyase: is a member of the fold-type IV of PLP dependent enzymes that converts 4-amino-4-deoxychorismate (ADC) to p-aminobenzoate and pyruvate

 Score = 45.4 bits (108), Expect = 7e-06
 Identities = 33/103 (32%), Positives = 47/103 (45%), Gaps = 16/103 (15%)

Query: 108 YGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANK 167
           YG G+FE M+A    DG+L L   D +  RL+  A R+ +P P + +   A++    AN 
Sbjct: 6   YGDGVFETMRAL---DGRLFLL--DAHLARLERSARRLGIPEPDLPRLRAALESLLAAN- 59

Query: 168 RWVPPPGKGSLYIRPLLV-GSGPILGLAPA--PEYTFLVFASP 207
                  +G   IR +L  G G   G AP+  P     V   P
Sbjct: 60  ----DIDEG--RIRLILSRGPGG-RGYAPSVCPGPALYVSVIP 95

Based on the information available from the crystal structure, most members of this subgroup are likely to function as dimers. The enzyme from E.Coli, the structure of which is available, is a homodimer that is folded into a small and a larger domain. The coenzyme pyridoxal 5; -phosphate resides at the interface of the two domains that is linked by a flexible loop. Members of this subgroup are found in Eukaryotes and bacteria. Length = 249

>gnl|CDD|236238 PRK08320, PRK08320, branched-chain amino acid aminotransferase; Reviewed

 Score = 41.4 bits (98), Expect = 2e-04
 Identities = 37/119 (31%), Positives = 56/119 (47%), Gaps = 28/119 (23%)

Query: 104 GVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSP-SIDQFIDAVKQT 162
           G L YG G+FEG++AY   +G   +FR  ++  RL   A+ + +  P S ++  + V +T
Sbjct: 25  GFL-YGDGVFEGIRAY---NG--RVFRLKEHIDRLYDSAKAIMLEIPLSKEEMTEIVLET 78

Query: 163 ALANKRWVPPPGKGSL---YIRPLL---VGSGPILGLAP--APEYTFLVFASPVGNYFK 213
              N           L   YIR ++   VG    LGL P   P+ T +  A P+G Y  
Sbjct: 79  LRKNN----------LRDAYIRLVVSRGVGD---LGLDPRKCPKPTVVCIAEPIGLYPG 124

Length = 288

>gnl|CDD|235696 PRK06092, PRK06092, 4-amino-4-deoxychorismate lyase; Reviewed

 Score = 39.4 bits (93), Expect = 7e-04
 Identities = 22/68 (32%), Positives = 28/68 (41%), Gaps = 5/68 (7%)

Query: 98  ELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFID 157
            LS S     YG G F      R  DGQ+ L    ++  RLQ   ER+ +P     Q   
Sbjct: 11  SLSVSDRSTQYGDGCFTTA---RVRDGQVSLL--SRHLQRLQDACERLAIPLDDWAQLEQ 65

Query: 158 AVKQTALA 165
            +KQ A  
Sbjct: 66  EMKQLAAE 73

Length = 268

>gnl|CDD|132501 TIGR03461, pabC_Proteo, aminodeoxychorismate lyase

 Score = 39.1 bits (92), Expect = 0.001
 Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 5/67 (7%)

Query: 98  ELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFID 157
           ++S S   L YG G F   K     +G++ L   D +  RLQ  A R+ +P P  D   +
Sbjct: 9   QISVSDRGLQYGDGCFTTAKVR---NGKIELL--DLHLERLQDAAARLGIPLPDWDALRE 63

Query: 158 AVKQTAL 164
            + Q A 
Sbjct: 64  EMAQLAA 70

Members of this protein family are aminodeoxychorismate lyase (ADC lyase), EC 4.1.3.38, the PabC protein of PABA biosynthesis. PABA (para-aminobenzoate) is a precursor of folate, needed for de novo purine biosynthesis. This enzyme is a pyridoxal-phosphate-binding protein in the class IV aminotransferase family (pfam01063) [Biosynthesis of cofactors, prosthetic groups, and carriers, Folic acid]. Length = 261

>gnl|CDD|238799 cd01558, D-AAT_like, D-Alanine aminotransferase (D-AAT_like): D-amino acid aminotransferase catalyzes transamination between D-amino acids and their respective alpha-keto acids

 Score = 37.2 bits (87), Expect = 0.004
 Identities = 21/101 (20%), Positives = 46/101 (45%), Gaps = 12/101 (11%)

Query: 108 YGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSP-SIDQFIDAVKQTALAN 166
           +G G++E ++ Y   +G    F  D++  RL   A+ + +  P + ++  + +++    N
Sbjct: 23  FGDGVYEVIRVY---NG--KPFALDEHLDRLYRSAKELRIDIPYTREELKELIRELVAKN 77

Query: 167 KRWVPPPGKGSLYIRPLLVGSGPILGLAPAPEYTFLVFASP 207
           +      G+G +YI+ +  G GP     P      +V  + 
Sbjct: 78  EG-----GEGDVYIQ-VTRGVGPRGHDFPKCVKPTVVIITQ 112

It plays a major role in the synthesis of bacterial cell wall components like D-alanine and D-glutamate in addition to other D-amino acids. The enzyme like other members of this superfamily requires PLP as a cofactor. Members of this subgroup are found in all three forms of life. Length = 270

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	227
PLN02883	384	Branched-chain amino acid aminotransferase	100.0
PLN02259	388	branched-chain-amino-acid aminotransferase 2	100.0
PLN02782	403	Branched-chain amino acid aminotransferase	100.0
KOG0975	379	consensus Branched chain aminotransferase BCAT1, p	100.0
PLN03117	355	Branched-chain-amino-acid aminotransferase; Provis	100.0
PRK13357	356	branched-chain amino acid aminotransferase; Provis	100.0
TIGR01123	313	ilvE_II branched-chain amino acid aminotransferase	99.93
TIGR01122	298	ilvE_I branched-chain amino acid aminotransferase,	99.9
COG0115	284	IlvE Branched-chain amino acid aminotransferase/4-	99.9
PRK07544	292	branched-chain amino acid aminotransferase; Valida	99.89
PRK12479	299	branched-chain amino acid aminotransferase; Provis	99.89
PRK06606	306	branched-chain amino acid aminotransferase; Valida	99.89
PRK08320	288	branched-chain amino acid aminotransferase; Review	99.88
PRK06680	286	D-amino acid aminotransferase; Reviewed	99.88
cd01557	279	BCAT_beta_family BCAT_beta_family: Branched-chain	99.87
cd01558	270	D-AAT_like D-Alanine aminotransferase (D-AAT_like)	99.87
PRK13356	286	aminotransferase; Provisional	99.86
PRK07650	283	4-amino-4-deoxychorismate lyase; Provisional	99.86
TIGR01121	276	D_amino_aminoT D-amino acid aminotransferase. Spec	99.86
PLN02845	336	Branched-chain-amino-acid aminotransferase-like pr	99.85
PRK12400	290	D-amino acid aminotransferase; Reviewed	99.84
PRK07849	292	4-amino-4-deoxychorismate lyase; Provisional	99.82
TIGR03461	261	pabC_Proteo aminodeoxychorismate lyase. Members of	99.82
PRK06092	268	4-amino-4-deoxychorismate lyase; Reviewed	99.8
PRK09266	266	hypothetical protein; Provisional	99.78
cd01559	249	ADCL_like ADCL_like: 4-Amino-4-deoxychorismate lya	99.76
cd00449	256	PLPDE_IV PyridoxaL 5'-Phosphate Dependent Enzymes	99.75
PRK07546	209	hypothetical protein; Provisional	98.75
PF01063	231	Aminotran_4: Aminotransferase class IV; InterPro:	98.41
PRK07101	187	hypothetical protein; Provisional	98.31

>PLN02883 Branched-chain amino acid aminotransferase

Probab=100.00  E-value=8.8e-49  Score=365.20  Aligned_cols=205  Identities=58%  Similarity=0.992  Sum_probs=188.9

Q ss_pred             HHHH-hhhhhhccccccccCcccchhhhhhhccccccCCCCCCCccccCCCCCCCCCCCcccCCceEEEEecc-ceEEcC
Q 027144           12 CLRN-FSQSLRVGSAFLKSGDFCRYTSQAAASLQQDCEPSAYSDDESADHMDWDNLGFGLTPADYMYTMKCSN-DYFEKG   89 (227)
Q Consensus        12 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~fg~~~td~m~~~~~~~-~~W~nG   89 (227)
                      .||+ |.|++.++|+++..+.+.++.+++..++...+.......+++.+++||++|+||++|||||++++|.+ ++|.++
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~fg~~~td~m~~~~~~~~~~w~~~   81 (384)
T PLN02883          2 ALRRCLPQSSTTSSYLSKIWGFRMHGTKAAASVVEEHVSGAEREDEEYADVDWDKLGFSLVRTDFMFATKSCRDGNFEQG   81 (384)
T ss_pred             chhhhccccccchhhhhccccceeccccccccchhhhcccccccccccccCCchhcCcCCeecCceEEEEEcCCCcccCC
Confidence            3566 88999999999999999999998877765445555557777888999999999999999999999876 589999


Q ss_pred             eEeeCCCcccCcCCcceeecCeEEeEEEEEEcCCCeEEeeChhhHHHHHHHhHhhcCCCCCCHHHHHHHHHHHHHhcCCc
Q 027144           90 RLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRW  169 (227)
Q Consensus        90 ~ivp~~~~~I~~~d~gL~YGdgvFEglKayr~~dG~i~lFRpd~H~~RL~~Sa~rL~mp~~~~e~l~~~i~~lV~~n~~w  169 (227)
                      +|+|+++++|||++++||||||||||||+||+.||++.+|||++|++||++||++|+||.++.++|.++|+++|+.|+.|
T Consensus        82 ~i~p~~~l~l~p~a~~l~YGdgvFEg~kayr~~dG~i~lfr~~~h~~RL~~SA~rL~lp~~~~e~~~~~i~~lv~~n~~w  161 (384)
T PLN02883         82 YLSRYGNIELNPAAGILNYGQGLIEGMKAYRGEDGRILLFRPELNAMRMKIGAERMCMHSPSVHQFIEGVKQTVLANRRW  161 (384)
T ss_pred             eEeeCCCcccCccccHhhcceeeeeeEEEEECCCCCEeeeChhHHHHHHHHHHHHhCCCCcCHHHHHHHHHHHHHhcccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCccEEEEEEEEecCCccccCCCCCcEEEEEEeecCCCccccc
Q 027144          170 VPPPGKGSLYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNYFKVAA  216 (227)
Q Consensus       170 vP~~~~~slYIRP~v~~~~~~lGv~ps~~~~f~I~~sP~g~Y~~~g~  216 (227)
                      ||+.+++++||||+++++++.+|+.++.+++|+|+++|+++|+++|+
T Consensus       162 vp~~~~~~lYIRp~v~~~~~~lG~~~~~~~~~~i~~~p~~~y~~~g~  208 (384)
T PLN02883        162 VPPPGKGSLYLRPLLFGSGASLGVAAAPEYTFLVFGSPVQNYFKEGT  208 (384)
T ss_pred             CCCCCCceEEEEEEEEecCCccCCCCCCCeEEEEEEEecccccccCc
Confidence            99987789999999999999999998889999999999999998764

>PLN02259 branched-chain-amino-acid aminotransferase 2

Probab=100.00  E-value=7.9e-47  Score=352.51  Aligned_cols=208  Identities=63%  Similarity=1.115  Sum_probs=186.7

Q ss_pred             HHH-HHHHHH-hhhhhhccccccccCcccchhhhhhhcccc-ccCCCCCCCccccCCCCCCCCCCCcccCCceEEEEecc
Q 027144            7 MIR-NACLRN-FSQSLRVGSAFLKSGDFCRYTSQAAASLQQ-DCEPSAYSDDESADHMDWDNLGFGLTPADYMYTMKCSN   83 (227)
Q Consensus         7 ~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~~~l~fg~~~td~m~~~~~~~   83 (227)
                      ||+ ..+||+ |+..+++ +. ..++.+.++.+++++++.. .+.......+.+.+++||++|+||+++||||++++|++
T Consensus         1 ~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~f~~~~td~m~~~~~~~   78 (388)
T PLN02259          1 MIKTITSLRKTLVLPLHL-HI-RTLQTFAKYNAQAASALREERKKPLYQNGDDVYADLDWDNLGFGLNPADYMYVMKCSK   78 (388)
T ss_pred             CccchhhhhhheEeeeeh-hh-hhhhhhhhhccccccccchhhccccccccccccccCCccccCCCCcccCceEEEEECC
Confidence            677 889999 8887776 44 7788888898888776633 23444456677778999999999999999999999975


Q ss_pred             -ceEEcCeEeeCCCcccCcCCcceeecCeEEeEEEEEEcCCCeEEeeChhhHHHHHHHhHhhcCCCCCCHHHHHHHHHHH
Q 027144           84 -DYFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQT  162 (227)
Q Consensus        84 -~~W~nG~ivp~~~~~I~~~d~gL~YGdgvFEglKayr~~dG~i~lFRpd~H~~RL~~Sa~rL~mp~~~~e~l~~~i~~l  162 (227)
                       ++|.||+++|++++.|+|.|++||||||||||||+||.+||++++|||++|++||++||++|+||.++.++|.++|+++
T Consensus        79 ~~~w~~g~ivp~~~~~i~~~drgl~YGdgvFEglkayr~~~G~i~lfr~~~h~~RL~~SA~rL~lp~~~~e~~~~~i~~l  158 (388)
T PLN02259         79 DGEFTQGELSPYGNIQLSPSAGVLNYGQAIYEGTKAYRKENGKLLLFRPDHNAIRMKLGAERMLMPSPSVDQFVNAVKQT  158 (388)
T ss_pred             CCeEECCEEeEchhCeeCchhhHHHhhhhhhhcEEEEECCCCeEeecCcHHHHHHHHHhHHHhCCCCcCHHHHHHHHHHH
Confidence             5899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhcCCcCCCCCCccEEEEEEEEecCCccccCCCCCcEEEEEEeecCCCccccc
Q 027144          163 ALANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNYFKVAA  216 (227)
Q Consensus       163 V~~n~~wvP~~~~~slYIRP~v~~~~~~lGv~ps~~~~f~I~~sP~g~Y~~~g~  216 (227)
                      |+.|+.|||+.+++++||||+++++++.+|+.|+.+++++|+++|+++|++.|+
T Consensus       159 v~~n~~~vp~~~~~~lyiRp~v~g~~~~lG~~p~~~~~~~i~~~p~~~~~~~g~  212 (388)
T PLN02259        159 ALANKRWVPPAGKGTLYIRPLLMGSGPILGLGPAPEYTFIVYASPVGNYFKEGM  212 (388)
T ss_pred             HHhccccCCCCCCceEEEEEEEEecCCccCcCCCCCcEEEEEEEechhhhhcCc
Confidence            999999999988789999999999888899998888999999999999998764

>PLN02782 Branched-chain amino acid aminotransferase

Probab=100.00  E-value=9.2e-44  Score=333.31  Aligned_cols=163  Identities=71%  Similarity=1.340  Sum_probs=153.5

Q ss_pred             CccccCCCCCCCCCCCcccCCceEEEEecc-ceEEcCeEeeCCCcccCcCCcceeecCeEEeEEEEEEcCCCeEEeeChh
Q 027144           54 DDESADHMDWDNLGFGLTPADYMYTMKCSN-DYFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPD  132 (227)
Q Consensus        54 ~~~~~~~~d~~~l~fg~~~td~m~~~~~~~-~~W~nG~ivp~~~~~I~~~d~gL~YGdgvFEglKayr~~dG~i~lFRpd  132 (227)
                      ...+..++||++|+||+++||||++++|++ |+|.||+++|++++.|+|.|++||||||||||||+|+++||++++|||+
T Consensus        63 ~~~~~~~~~~~~l~fg~~~td~m~~~~~~~~~~w~ng~ivp~~~~~i~~~d~gl~YGdgvFEg~kayr~~~G~i~lFr~d  142 (403)
T PLN02782         63 EVTELADIDWDNLGFGLVPTDYMYIMKCNRDGEFSKGELQRFGNIELSPSAGVLNYGQGLFEGLKAYRKEDGNILLFRPE  142 (403)
T ss_pred             CCcccccCCccccCCCccccCceEEEEECCCCcEeCCEEEECCCCEeChhhhHHhhhhhhhheEEEEEcCCCcEeeeChH
Confidence            344456899999999999999999999965 5899999999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHhHhhcCCCCCCHHHHHHHHHHHHHhcCCcCCCCCCccEEEEEEEEecCCccccCCCCCcEEEEEEeecCCCc
Q 027144          133 QNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNYF  212 (227)
Q Consensus       133 ~H~~RL~~Sa~rL~mp~~~~e~l~~~i~~lV~~n~~wvP~~~~~slYIRP~v~~~~~~lGv~ps~~~~f~I~~sP~g~Y~  212 (227)
                      +|++||++||++|+||.++.|+|.++|+++|+.|+.|||+.+++++||||+++++++.+|+.|+.+++++|+++|+++||
T Consensus       143 ~H~~RL~~SA~rL~lp~~~~e~l~~~i~~lv~~n~~~vP~~~~~~lyiRp~v~g~~~~lG~~~~~~~~~~i~~~p~~~~~  222 (403)
T PLN02782        143 ENAIRMRNGAERMCMPAPTVEQFVEAVKETVLANKRWVPPPGKGSLYIRPLLMGSGAVLGLAPAPEYTFLIYVSPVGNYF  222 (403)
T ss_pred             HHHHHHHHHHHHhCcCCCCHHHHHHHHHHHHHhccccCCCCCCccEEEEEEEEecCCCcCcCCCCCcEEEEEEEECcccc
Confidence            99999999999999999999999999999999999999998878999999999999999999888899999999999999


Q ss_pred             cccc
Q 027144          213 KVAA  216 (227)
Q Consensus       213 ~~g~  216 (227)
                      +.|.
T Consensus       223 ~~g~  226 (403)
T PLN02782        223 KEGV  226 (403)
T ss_pred             ccCC
Confidence            7764

>KOG0975 consensus Branched chain aminotransferase BCAT1, pyridoxal phosphate enzymes type IV superfamily [Amino acid transport and metabolism]

Probab=100.00  E-value=3.1e-44  Score=329.25  Aligned_cols=165  Identities=57%  Similarity=1.066  Sum_probs=158.9

Q ss_pred             CCCccccCCCCCCCCCCCcccCCceEEEEeccceEEcCeEeeCCCcccCcCCcceeecCeEEeEEEEEEcCCCeEEeeCh
Q 027144           52 YSDDESADHMDWDNLGFGLTPADYMYTMKCSNDYFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRP  131 (227)
Q Consensus        52 ~~~~~~~~~~d~~~l~fg~~~td~m~~~~~~~~~W~nG~ivp~~~~~I~~~d~gL~YGdgvFEglKayr~~dG~i~lFRp  131 (227)
                      ...+.+...+||++|+||.+|||||++++|+.+.|..|+|.|++++++||++.+|||||++||||||||++||++++|||
T Consensus        36 ~~~~~k~~~~d~~~L~fg~~~td~m~~~k~~~~gw~~~~I~p~gni~~~Paa~vlhy~~~lfEG~KAyRt~d~~i~LFrP  115 (379)
T KOG0975|consen   36 TQTDEKPAPIDWDELGFGLVFTDHMLTIKWSEDGWSQGEISPFGNLSLHPAAKVLHYGQGLFEGLKAYRTEDGKIRLFRP  115 (379)
T ss_pred             ccCCCccCcCCHHHhccCCcccceeEEEeccccCcCCCCccCcCCEeeChhhhceecchhhccccccccCCCCeEEEecc
Confidence            34466677899999999999999999999997689999999999999999999999999999999999999999999999


Q ss_pred             hhHHHHHHHhHhhcCCCCCCHHHHHHHHHHHHHhcCCcCCCCCCccEEEEEEEEecCCccccCCCCCcEEEEEEeecCCC
Q 027144          132 DQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNY  211 (227)
Q Consensus       132 d~H~~RL~~Sa~rL~mp~~~~e~l~~~i~~lV~~n~~wvP~~~~~slYIRP~v~~~~~~lGv~ps~~~~f~I~~sP~g~Y  211 (227)
                      +.|+.||++||.|++||.|+.++|.++|++++.+|+.|||+.+++++||||+++++++.+|+.++++++|+|+++|+|+|
T Consensus       116 d~N~~Rm~~sA~r~~lP~p~~~e~ie~i~~lv~~~~~wVP~~~~~SLyirp~l~Gt~~~Lgv~~~~e~~l~vi~spvg~y  195 (379)
T KOG0975|consen  116 DQNMDRMLRSAERACLPSPDVEEFIEAIKQLVLADKEWVPPPGKGSLYIRPLLIGTDPVLGVSPAPEATLFVIVSPVGPY  195 (379)
T ss_pred             hhhHHHHHhhhhhccCCCCCHHHHHHHHHHHHHhcCcccCCCCCceEEEeeeeccCCcccccccCCcceEEEEEcccchh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccccc
Q 027144          212 FKVAA  216 (227)
Q Consensus       212 ~~~g~  216 (227)
                      |+.|+
T Consensus       196 f~~g~  200 (379)
T KOG0975|consen  196 FKSGF  200 (379)
T ss_pred             ccccc
Confidence            99974

>PLN03117 Branched-chain-amino-acid aminotransferase; Provisional

Probab=100.00  E-value=5.7e-37  Score=283.00  Aligned_cols=162  Identities=65%  Similarity=1.263  Sum_probs=148.6

Q ss_pred             CCCccccCCCCCCCCCCCcccCCceEEEEeccc-eEEcCeEeeCCCcccCcCCcceeecCeEEeEEEEEEcCCCeEEeeC
Q 027144           52 YSDDESADHMDWDNLGFGLTPADYMYTMKCSND-YFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFR  130 (227)
Q Consensus        52 ~~~~~~~~~~d~~~l~fg~~~td~m~~~~~~~~-~W~nG~ivp~~~~~I~~~d~gL~YGdgvFEglKayr~~dG~i~lFR  130 (227)
                      .....+..++||++||||++|||||+.++|.++ +|.||+++|.+++.|++.|+|||||||||||||+|+..||++++|+
T Consensus        11 ~~~~~~~~~~~~~~~~f~~~~~~~m~~~~~~~~~~~~ng~~v~~~~a~i~~~drgl~yGDGvFEtir~y~~~~G~i~lf~   90 (355)
T PLN03117         11 SKADEKYANVKWEELGFALVPTDYMYVAKCKQGESFSEGKIVPYGDISISPCAGILNYGQGLFEGLKAYRTEDGRITLFR   90 (355)
T ss_pred             CCccccccccCccccCCCccccCceEEEEcCCCCeEECCEEEEchhceeCcchhhhhhcceeEeeEEEEECCCCcEeeeC
Confidence            344455577999999999999999999999876 7999999999999999999999999999999999988899988999


Q ss_pred             hhhHHHHHHHhHhhcCCCCCCHHHHHHHHHHHHHhcCCcCCCCCCccEEEEEEEEecCCccccCCCCCcEEEEEEeecCC
Q 027144          131 PDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAPEYTFLVFASPVGN  210 (227)
Q Consensus       131 pd~H~~RL~~Sa~rL~mp~~~~e~l~~~i~~lV~~n~~wvP~~~~~slYIRP~v~~~~~~lGv~ps~~~~f~I~~sP~g~  210 (227)
                      +++|++||++||++|+||.++.++|.++|.++++.|+.|||+.+.+.+||||+++++++.+|+.|.+++.++|+++|+++
T Consensus        91 l~~Hl~RL~~Sa~~L~i~~p~~~~l~~~i~~lv~~n~~~i~~~~~~~~yir~~~~g~~~~~g~~~~~~~~~~i~~~p~~~  170 (355)
T PLN03117         91 PDQNALRMQTGADRLCMTPPSLEQFVEAVKQTVLANKKWVPPPGKGTLYIRPLLIGSGAVLGVAPAPEYTFLIYASPVGN  170 (355)
T ss_pred             cHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHhccccccCCCCCcEEEEEEEEEecCccCcCCCCCcEEEEEEEeccc
Confidence            99999999999999999999999999999999999999999887778999999998877888887777889999999987


Q ss_pred             Ccc
Q 027144          211 YFK  213 (227)
Q Consensus       211 Y~~  213 (227)
                      |+.
T Consensus       171 ~~~  173 (355)
T PLN03117        171 YHK  173 (355)
T ss_pred             ccc
Confidence            663

>PRK13357 branched-chain amino acid aminotransferase; Provisional

Probab=100.00  E-value=8.9e-33  Score=254.96  Aligned_cols=165  Identities=47%  Similarity=0.871  Sum_probs=147.0

Q ss_pred             CCCCCccccCCCCCCCCCCCcccCCceEEEEeccceEEcCeEeeCCCcccCcCCcceeecCeEEeEEEEEEcCCCeEEee
Q 027144           50 SAYSDDESADHMDWDNLGFGLTPADYMYTMKCSNDYFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLF  129 (227)
Q Consensus        50 ~~~~~~~~~~~~d~~~l~fg~~~td~m~~~~~~~~~W~nG~ivp~~~~~I~~~d~gL~YGdgvFEglKayr~~dG~i~lF  129 (227)
                      .+.+....+..+||++||||++.+|||++..|++|.|.||+++|.+++.|++.|+||+||||||||+|+|+..+|++++|
T Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nG~~vp~~~a~is~~Drg~~yGDGvFEtir~~~~~~G~~~~f   85 (356)
T PRK13357          6 KPNPTSDEKRAIDWANLGFGYVFTDHMVVIDYKDGKWHDARLVPYGPLELDPAATVLHYGQEIFEGLKAYRHKDGSIVLF   85 (356)
T ss_pred             CCCcccccccCCCccccCCCccccceeEEEEecCCcccCCeEeeCCCceeCcccchhhhcceeeeeEEEEEcCCCcEeee
Confidence            34455566677899999999999999999999999999999999999999999999999999999999998778988999


Q ss_pred             ChhhHHHHHHHhHhhcCCCCCCHHHHHHHHHHHHHhcCCcCCCC-CCccEEEEEEEEecCCccccCCCCCcEEEEEEeec
Q 027144          130 RPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPP-GKGSLYIRPLLVGSGPILGLAPAPEYTFLVFASPV  208 (227)
Q Consensus       130 Rpd~H~~RL~~Sa~rL~mp~~~~e~l~~~i~~lV~~n~~wvP~~-~~~slYIRP~v~~~~~~lGv~ps~~~~f~I~~sP~  208 (227)
                      ++++|++||.+||++|+||.++.++|.+++.++++.|..++++. .++.+||||+++++...+|+.+..++.++|++.|.
T Consensus        86 ~l~~Hl~RL~~Sa~~L~i~~~~~~~l~~~i~~li~~n~~~~~~~~~~~~~~ir~~v~rg~~~~g~~~~~~~~~~i~~~~~  165 (356)
T PRK13357         86 RPDANAKRLQRSADRLLMPELPEELFLEAVKQLVKADRDWVPPYGEGASLYLRPFMIATEPFLGVKPAEEYIFCVIASPV  165 (356)
T ss_pred             ChHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHhcccccCCCCCCccEEEEEEEEccCCcccccCCCccEEEEEEEec
Confidence            99999999999999999997799999999999999998776443 33589999999999888888766678999999988


Q ss_pred             CCCccc
Q 027144          209 GNYFKV  214 (227)
Q Consensus       209 g~Y~~~  214 (227)
                      ++|+..
T Consensus       166 ~~~~~~  171 (356)
T PRK13357        166 GAYFKG  171 (356)
T ss_pred             hhhccc
Confidence            776654

>TIGR01123 ilvE_II branched-chain amino acid aminotransferase, group II

Probab=99.93  E-value=5.1e-26  Score=205.82  Aligned_cols=130  Identities=55%  Similarity=1.008  Sum_probs=117.7

Q ss_pred             EEcCeEeeCCCcccCcCCcceeecCeEEeEEEEEEcCCCeEEeeChhhHHHHHHHhHhhcCCCCCCHHHHHHHHHHHHHh
Q 027144           86 FEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALA  165 (227)
Q Consensus        86 W~nG~ivp~~~~~I~~~d~gL~YGdgvFEglKayr~~dG~i~lFRpd~H~~RL~~Sa~rL~mp~~~~e~l~~~i~~lV~~  165 (227)
                      |.||+++|.+++.|++.|+||+||||||||||+|+..+|++++|++++|++||.+||++|+||.++.++|.+.++++++.
T Consensus         1 ~~nG~~~~~~~a~i~~~Drg~~yGdGvFEtir~~~~~~g~~~~~~l~~Hl~RL~~sa~~L~i~~~~~~~l~~~l~~~~~~   80 (313)
T TIGR01123         1 WHNGRLTPYGPLHLDPGSTVLHYGQECFEGLKAYRCADGSIVLFRPDANAARLRRSARRLLMPELPDELFLEALRQLVKA   80 (313)
T ss_pred             CCCCEEEECccCeeCcchhHHHhhhhheeeeeEEECCCCcEeeeChHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHH
Confidence            88999999999999999999999999999999998889988899999999999999999999988999999999999999


Q ss_pred             cCCcCCCCC-CccEEEEEEEEecCCccccCCCCCcEEEEEEeecCCCcccc
Q 027144          166 NKRWVPPPG-KGSLYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNYFKVA  215 (227)
Q Consensus       166 n~~wvP~~~-~~slYIRP~v~~~~~~lGv~ps~~~~f~I~~sP~g~Y~~~g  215 (227)
                      |..++++.. ++.+||||+++++.+.+|+.+.+.+.++|++.|.++|+..|
T Consensus        81 ~~~~~~~~~~~~~~~ir~~v~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~  131 (313)
T TIGR01123        81 NKDWVPPYGSGASLYLRPFVIGTEPNLGVRPAPEYLFYVFASPVGAYFKGG  131 (313)
T ss_pred             ccccCCCCCCCCcEEEEeEEEecCCccccCCCCccEEEEEEEEchhhcccc
Confidence            998877544 35799999999998888888766788999999887776544

Among the class IV aminotransferases are two phylogenetically separable groups of branched-chain amino acid aminotransferase (IlvE). The last common ancestor of the two lineages appears also to have given rise to a family of D-amino acid aminotransferases (DAAT). This model represents the IlvE family less similar to the DAAT family.

>TIGR01122 ilvE_I branched-chain amino acid aminotransferase, group I

Probab=99.90  E-value=3.2e-23  Score=186.06  Aligned_cols=120  Identities=30%  Similarity=0.542  Sum_probs=106.4

Q ss_pred             EEcCeEeeCCCcccCcCCcceeecCeEEeEEEEEEcCCCeEEeeChhhHHHHHHHhHhhcCCCCC-CHHHHHHHHHHHHH
Q 027144           86 FEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSP-SIDQFIDAVKQTAL  164 (227)
Q Consensus        86 W~nG~ivp~~~~~I~~~d~gL~YGdgvFEglKayr~~dG~i~lFRpd~H~~RL~~Sa~rL~mp~~-~~e~l~~~i~~lV~  164 (227)
                      |.||+++|.+++.|++.|+||+||||||||||+|.+.|| .++|++++|++||.+||++|+|+.+ +.++|.+.+.++++
T Consensus         1 ~~ng~~v~~~~~~i~~~drg~~~GdgvFEt~r~~~g~~~-~~~~~l~~Hl~RL~~Sa~~l~i~~~~~~~~l~~~i~~~i~   79 (298)
T TIGR01122         1 WMDGEFVDWEDAKVHVLTHALHYGTGVFEGIRAYDTDKG-PAIFRLKEHIQRLYDSAKIYRMEIPYSKEELMEATRETLR   79 (298)
T ss_pred             CcCCEEEEhhhcccChhhhhhhccceEEEEEEEEcCCCc-ceeeChHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHH
Confidence            789999999999999999999999999999999955443 3689999999999999999999976 89999999999999


Q ss_pred             hcCCcCCCCCCccEEEEEEEEecCCccccCCCC--CcEEEEEEeecCCCcc
Q 027144          165 ANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAP--EYTFLVFASPVGNYFK  213 (227)
Q Consensus       165 ~n~~wvP~~~~~slYIRP~v~~~~~~lGv~ps~--~~~f~I~~sP~g~Y~~  213 (227)
                      .|..       .++|||++++++.+.+|+.|..  ++.++|+++|.+.|+.
T Consensus        80 ~~~~-------~~~~ir~~v~rg~~~~g~~~~~~~~~~~~v~~~~~~~~~~  123 (298)
T TIGR01122        80 KNNL-------RSAYIRPLVFRGDGDLGLNPRAGYKPDVIIAAWPWGAYLG  123 (298)
T ss_pred             hcCC-------CCEEEEEEEEEccCCCCcCCCCCCCceEEEEEeccccccC
Confidence            9875       5799999999999888887633  6788999999877654

Among the class IV aminotransferases are two phylogenetically separable groups of branched-chain amino acid aminotransferase (IlvE). The last common ancestor of the two lineages appears also to have given rise to a family of D-amino acid aminotransferases (DAAT). This model represents the IlvE family more strongly similar to the DAAT family.

>COG0115 IlvE Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase [Amino acid transport and metabolism / Coenzyme metabolism]

Probab=99.90  E-value=6e-23  Score=183.68  Aligned_cols=121  Identities=39%  Similarity=0.602  Sum_probs=107.2

Q ss_pred             eEEcCeEeeCCCcccCcCCcceeecCeEEeEEEEEEcCCCeEEeeChhhHHHHHHHhHhhcCCCCC-CHHHHHHHHHHHH
Q 027144           85 YFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSP-SIDQFIDAVKQTA  163 (227)
Q Consensus        85 ~W~nG~ivp~~~~~I~~~d~gL~YGdgvFEglKayr~~dG~i~lFRpd~H~~RL~~Sa~rL~mp~~-~~e~l~~~i~~lV  163 (227)
                      .|.||+++|.+++.+++.|+++||||+||||+|+|   +|  .+||+++|++||++||++|+||.+ +.+++......++
T Consensus         4 ~~~~g~~~~~~~~~~~~~~~~~~~g~~vFE~~r~~---~g--~~~~l~~H~~RL~~Sa~~l~~~~~~~~~~~~~~~~~~~   78 (284)
T COG0115           4 IWVNGELVPEEDAKLSVLDRGLHYGDGVFETLRAY---NG--KLFRLDEHLARLKRSAKRLGLPRPESEEEIELLIQLLL   78 (284)
T ss_pred             EeECCEEccCcccccCcccceeccccceeEEEEEe---CC--cccChHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHH
Confidence            69999999999999999999999999999999999   77  689999999999999999999998 6666666666666


Q ss_pred             HhcCCcCCCCCCccEEEEEEEEecCCccccCCCCCcEEEEEEeecCCCccccc
Q 027144          164 LANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNYFKVAA  216 (227)
Q Consensus       164 ~~n~~wvP~~~~~slYIRP~v~~~~~~lGv~ps~~~~f~I~~sP~g~Y~~~g~  216 (227)
                      +.|+. .     ..+|+||+++++++.+|+.+..++.+.|+++|+++|++.+.
T Consensus        79 ~~~~~-~-----~~~y~r~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~  125 (284)
T COG0115          79 AKNNL-V-----PGLYIRPLVRGGGGGLGVRDATEPTLIVAASPVGAYLKGGR  125 (284)
T ss_pred             HhhCC-C-----CceEEEEEEEeecCCCCcCCCCccEEEEEEEecccccCccc
Confidence            65553 2     23999999999999999999668999999999999999764

>PRK07544 branched-chain amino acid aminotransferase; Validated

Probab=99.89  E-value=5.5e-23  Score=184.23  Aligned_cols=117  Identities=25%  Similarity=0.422  Sum_probs=103.8

Q ss_pred             eEEcCeEeeCCCcccCcCCcceeecCeEEeEEEEEEcCCCeEEeeChhhHHHHHHHhHhhcCCCCC-CHHHHHHHHHHHH
Q 027144           85 YFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSP-SIDQFIDAVKQTA  163 (227)
Q Consensus        85 ~W~nG~ivp~~~~~I~~~d~gL~YGdgvFEglKayr~~dG~i~lFRpd~H~~RL~~Sa~rL~mp~~-~~e~l~~~i~~lV  163 (227)
                      .|.||+++|.+++.|++.|+||+||||||||+|+|   +|  ++|++++|++||++||++|+|+.+ +.+.|.+.+.+++
T Consensus        11 ~~~nG~~~~~~~~~i~~~drg~~~GdgvFEt~r~~---~g--~~~~l~~Hl~RL~~Sa~~l~i~~~~~~~~l~~~i~~~i   85 (292)
T PRK07544         11 IWMDGELVPWRDAKVHVLTHGLHYASSVFEGERAY---GG--KIFKLREHSERLRRSAELLDFEIPYSVAEIDAAKKETL   85 (292)
T ss_pred             EEECCEEEEhHHCccChhhhHhhhcceeEEeeEee---CC--cccChHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHH
Confidence            79999999999999999999999999999999999   99  578999999999999999999977 8999999999999


Q ss_pred             HhcCCcCCCCCCccEEEEEEEEecCCccccCCCC-CcEEEEEEeecCCCcc
Q 027144          164 LANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAP-EYTFLVFASPVGNYFK  213 (227)
Q Consensus       164 ~~n~~wvP~~~~~slYIRP~v~~~~~~lGv~ps~-~~~f~I~~sP~g~Y~~  213 (227)
                      +.|..       .++|||++++++.+.+|+.+.. ...++|...|.++++.
T Consensus        86 ~~~~~-------~~~~ir~~v~rg~~~~g~~~~~~~~~~~v~~~~~~~~~~  129 (292)
T PRK07544         86 AANGL-------TDAYVRPVAWRGSEMMGVSAQQNKIHLAIAAWEWPSYFD  129 (292)
T ss_pred             HhcCC-------CCeEEEEEEEecCCCCCcCCCCCCcEEEEEEeccccccC
Confidence            99975       5789999999999888877554 4567777777665553

>PRK12479 branched-chain amino acid aminotransferase; Provisional

Probab=99.89  E-value=1.4e-22  Score=182.54  Aligned_cols=114  Identities=26%  Similarity=0.440  Sum_probs=103.4

Q ss_pred             eEEcCeEeeCCCcccCcCCcceeecCeEEeEEEEEEcCCCeEEeeChhhHHHHHHHhHhhcCCCCC-CHHHHHHHHHHHH
Q 027144           85 YFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSP-SIDQFIDAVKQTA  163 (227)
Q Consensus        85 ~W~nG~ivp~~~~~I~~~d~gL~YGdgvFEglKayr~~dG~i~lFRpd~H~~RL~~Sa~rL~mp~~-~~e~l~~~i~~lV  163 (227)
                      .|.||+++|.+++.|++.|+||+||||||||||+|   +|  ++|++++|++||.+||++|+|+.+ +.+++.+.+.+++
T Consensus         6 ~~~nG~~~~~~~~~i~~~drg~~~GdgvFEt~r~~---~g--~~~~l~~Hl~RL~~Sa~~l~i~~p~~~~~l~~~i~~~i   80 (299)
T PRK12479          6 IYMNGEFVEKEKAVVSVYDHGFLYGDGVFEGIRSY---GG--NVFCLKEHVKRLYESAKSILLTIPLTVDEMEEAVLQTL   80 (299)
T ss_pred             EEECCEEeEHHHCccccccchhheeeeEEEEEEEE---CC--EecCHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHH
Confidence            79999999999999999999999999999999999   99  578999999999999999999877 7999999999999


Q ss_pred             HhcCCcCCCCCCccEEEEEEEEecCCccccCCCC--CcEEEEEEeecCC
Q 027144          164 LANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAP--EYTFLVFASPVGN  210 (227)
Q Consensus       164 ~~n~~wvP~~~~~slYIRP~v~~~~~~lGv~ps~--~~~f~I~~sP~g~  210 (227)
                      +.|..       .++|||++++++.+.+|+.+..  ++.++|++.|...
T Consensus        81 ~~~~~-------~~~~ir~~v~rg~g~~g~~~~~~~~~~~~i~~~~~~~  122 (299)
T PRK12479         81 QKNEY-------ADAYIRLIVSRGKGDLGLDPRSCVKPSVIIIAEQLKL  122 (299)
T ss_pred             HHcCC-------CCeEEEEEEEecCCCCCCCCccCCCceEEEEEEEccc
Confidence            99865       5789999999998888887654  5688888888754

>PRK06606 branched-chain amino acid aminotransferase; Validated

Probab=99.89  E-value=1.5e-22  Score=182.64  Aligned_cols=121  Identities=30%  Similarity=0.522  Sum_probs=107.6

Q ss_pred             eEEcCeEeeCCCcccCcCCcceeecCeEEeEEEEEEcCCCeEEeeChhhHHHHHHHhHhhcCCCCC-CHHHHHHHHHHHH
Q 027144           85 YFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSP-SIDQFIDAVKQTA  163 (227)
Q Consensus        85 ~W~nG~ivp~~~~~I~~~d~gL~YGdgvFEglKayr~~dG~i~lFRpd~H~~RL~~Sa~rL~mp~~-~~e~l~~~i~~lV  163 (227)
                      .|.||+++|.+++.|++.|+||+||||||||+|++.+.+|. .+|++++|++||++||++|+|+.+ +.++|.+.+.+++
T Consensus         9 ~~~nG~~~~~~~~~i~~~drg~~~GdgvFEtir~~~g~~~~-~~~~l~~Hl~RL~~Sa~~l~i~~~~~~~~l~~~i~~~i   87 (306)
T PRK06606          9 IWFNGELVPWEDAKVHVLTHALHYGTGVFEGIRAYDTPKGP-AIFRLREHTKRLFNSAKILRMEIPYSVDELMEAQREVV   87 (306)
T ss_pred             EEECCEEEEhHHcccChhhhhhhhcceeEEEEEEecCCCCC-eeeChHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHH
Confidence            79999999999999999999999999999999999555443 489999999999999999999977 7899999999999


Q ss_pred             HhcCCcCCCCCCccEEEEEEEEecCCccccCCCC-CcEEEEEEeecCCCcc
Q 027144          164 LANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAP-EYTFLVFASPVGNYFK  213 (227)
Q Consensus       164 ~~n~~wvP~~~~~slYIRP~v~~~~~~lGv~ps~-~~~f~I~~sP~g~Y~~  213 (227)
                      +.|..       .++|||++++++.+.+|+.+.. ++.++|.+.|.++|+.
T Consensus        88 ~~~~~-------~~~~ir~~v~rg~~~~g~~~~~~~~~~~i~~~~~~~~~~  131 (306)
T PRK06606         88 RKNNL-------KSAYIRPLVFVGDEGLGVRPHGLPTDVAIAAWPWGAYLG  131 (306)
T ss_pred             HhcCC-------CCEEEEEEEEecCCccCcCCCCCCceEEEEEeccccccC
Confidence            99875       5799999999998888887654 6788899998877653

>PRK08320 branched-chain amino acid aminotransferase; Reviewed

Probab=99.88  E-value=3.1e-22  Score=178.72  Aligned_cols=116  Identities=28%  Similarity=0.455  Sum_probs=103.9

Q ss_pred             eEEcCeEeeCCCcccCcCCcceeecCeEEeEEEEEEcCCCeEEeeChhhHHHHHHHhHhhcCCCCC-CHHHHHHHHHHHH
Q 027144           85 YFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSP-SIDQFIDAVKQTA  163 (227)
Q Consensus        85 ~W~nG~ivp~~~~~I~~~d~gL~YGdgvFEglKayr~~dG~i~lFRpd~H~~RL~~Sa~rL~mp~~-~~e~l~~~i~~lV  163 (227)
                      .|.||++++..++.|++.|+|++||||||||||++   +|  .+|++++|++||.+||++|+|+.+ +.+.+.+++.+++
T Consensus         5 ~~~nG~~~~~~~~~i~~~drg~~~GdgvFEt~~v~---~g--~~~~l~~Hl~RL~~Sa~~l~i~~p~~~~~l~~~i~~~i   79 (288)
T PRK08320          5 IYLNGEFVPKEEAKVSVFDHGFLYGDGVFEGIRAY---NG--RVFRLKEHIDRLYDSAKAIMLEIPLSKEEMTEIVLETL   79 (288)
T ss_pred             EEECCEEEEHHHCcccccchhhhhcceEEEEEEEE---CC--EeecHHHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHH
Confidence            79999999999999999999999999999999999   99  578999999999999999999877 7999999999999


Q ss_pred             HhcCCcCCCCCCccEEEEEEEEecCCccccCCCC--CcEEEEEEeecCCCc
Q 027144          164 LANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAP--EYTFLVFASPVGNYF  212 (227)
Q Consensus       164 ~~n~~wvP~~~~~slYIRP~v~~~~~~lGv~ps~--~~~f~I~~sP~g~Y~  212 (227)
                      ++|+.       .+++||++++++.+.+|+.|..  .+.+++++.|..++.
T Consensus        80 ~~~~~-------~~~~iri~v~rg~g~~g~~~~~~~~~~~~~~~~~~~~~~  123 (288)
T PRK08320         80 RKNNL-------RDAYIRLVVSRGVGDLGLDPRKCPKPTVVCIAEPIGLYP  123 (288)
T ss_pred             HhcCC-------CCEEEEEEEEECCCcCCCCcccCCCceEEEEEEEcCcCC
Confidence            99865       5789999999988888887653  567888888876544

>PRK06680 D-amino acid aminotransferase; Reviewed

Probab=99.88  E-value=8.5e-22  Score=176.25  Aligned_cols=115  Identities=16%  Similarity=0.228  Sum_probs=101.5

Q ss_pred             eEEcCeEeeCCCcccCcCCcceeecCeEEeEEEEEEcCCCeEEeeChhhHHHHHHHhHhhcCCCCC-CHHHHHHHHHHHH
Q 027144           85 YFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSP-SIDQFIDAVKQTA  163 (227)
Q Consensus        85 ~W~nG~ivp~~~~~I~~~d~gL~YGdgvFEglKayr~~dG~i~lFRpd~H~~RL~~Sa~rL~mp~~-~~e~l~~~i~~lV  163 (227)
                      +|.||+++|.+++.|++.|++++||||||||+|+|   +|  ++|++++|++||.+||++|+|+.+ +.++|.+.+.+++
T Consensus         5 ~~~nG~~~~~~~~~i~~~drg~~yGdGvFEt~r~~---~g--~~~~l~~Hl~RL~~Sa~~L~i~~~~~~~~l~~~i~~~~   79 (286)
T PRK06680          5 AYVNGRYVNHREARVHIEDRGFQFADGIYEVCAVR---DG--KLVDLDRHLARLFRSLGEIRIAPPMTRAELVEVLRELI   79 (286)
T ss_pred             EEECCEEEEHHHCcccccccccceeeEEEEEEEEE---CC--EEechHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHH
Confidence            79999999999999999999999999999999999   99  467889999999999999999976 8999999999999


Q ss_pred             HhcCCcCCCCCCccEEEEEEEEecCCccccC-CC--CCcEEEEEEeecCCC
Q 027144          164 LANKRWVPPPGKGSLYIRPLLVGSGPILGLA-PA--PEYTFLVFASPVGNY  211 (227)
Q Consensus       164 ~~n~~wvP~~~~~slYIRP~v~~~~~~lGv~-ps--~~~~f~I~~sP~g~Y  211 (227)
                      ++|+.       ..++||+.++++.+..|.. |.  .++.++|++.|.++|
T Consensus        80 ~~~~~-------~~~~lr~~vtrG~~~~~~~~~~~~~~~~~~i~~~~~~~~  123 (286)
T PRK06680         80 RRNRV-------REGLVYLQVTRGVARRDHVFPAADVKPSVVVFAKSVDFA  123 (286)
T ss_pred             HHcCC-------CceEEEEEEEeCCCCCCCCCCCCCCCcEEEEEEEecccc
Confidence            99875       5679999999887666654 32  367899999998753

>cd01557 BCAT_beta_family BCAT_beta_family: Branched-chain aminotransferase catalyses the transamination of the branched-chain amino acids leusine, isoleucine and valine to their respective alpha-keto acids, alpha-ketoisocaproate, alpha-keto-beta-methylvalerate and alpha-ketoisovalerate

Probab=99.87  E-value=1.3e-21  Score=174.69  Aligned_cols=116  Identities=54%  Similarity=0.999  Sum_probs=102.4

Q ss_pred             ccCcCCcceeecCeEEeEEEEEEcCCCeEEeeChhhHHHHHHHhHhhcCCCCCCHHHHHHHHHHHHHhcCCcCCCCCCcc
Q 027144           98 ELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGKGS  177 (227)
Q Consensus        98 ~I~~~d~gL~YGdgvFEglKayr~~dG~i~lFRpd~H~~RL~~Sa~rL~mp~~~~e~l~~~i~~lV~~n~~wvP~~~~~s  177 (227)
                      +|++.|+||+||||||||+|+|...||+.++|++++|++||.+||++|+|+.++.++|.+.+.++++.|+.|.|..+..+
T Consensus         1 ~i~~~drg~~yGdgvFEtir~~~~~~g~g~~~~l~~Hl~RL~~sa~~l~i~~~~~~~l~~~i~~~i~~~~~~~~~~~~~~   80 (279)
T cd01557           1 SLHPATHALHYGQAVFEGLKAYRTPDGKIVLFRPDENAERLNRSARRLGLPPFSVEEFIDAIKELVKLDADWVPYGGGAS   80 (279)
T ss_pred             CcCccccHhhcChhheeeEEEEecCCCCEeEECHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHhccccCCCCCCCC
Confidence            47899999999999999999995555655799999999999999999999966999999999999999999977665678


Q ss_pred             EEEEEEEEecCCccccCCCCCcEEEEEEeecCCCcc
Q 027144          178 LYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNYFK  213 (227)
Q Consensus       178 lYIRP~v~~~~~~lGv~ps~~~~f~I~~sP~g~Y~~  213 (227)
                      +|||++++++.+.+|+.+..+++++|++.|.++++.
T Consensus        81 ~~ir~~v~rg~~~~g~~~~~~~~~~i~~~~~~~~~~  116 (279)
T cd01557          81 LYIRPFIFGTDPQLGVSPALEYLFAVFASPVGAYFK  116 (279)
T ss_pred             EEEEEEEEeccccCCcCCCCccEEEEEEEEcccccc
Confidence            999999999988888876666889999999877664

The enzyme requires pyridoxal 5'-phosphate (PLP) as a cofactor to catalyze the reaction. It has been found that mammals have two foms of the enzyme - mitochondrial and cytosolic forms while bacteria contain only one form of the enzyme. The mitochondrial form plays a significant role in skeletal muscle glutamine and alanine synthesis and in interorgan nitrogen metabolism.Members of this subgroup are widely distributed in all three forms of life.

>cd01558 D-AAT_like D-Alanine aminotransferase (D-AAT_like): D-amino acid aminotransferase catalyzes transamination between D-amino acids and their respective alpha-keto acids

Probab=99.87  E-value=1e-21  Score=173.28  Aligned_cols=113  Identities=16%  Similarity=0.257  Sum_probs=95.8

Q ss_pred             EEcCeEeeCCCcccCcCCcceeecCeEEeEEEEEEcCCCeEEeeChhhHHHHHHHhHhhcCCCCC-CHHHHHHHHHHHHH
Q 027144           86 FEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSP-SIDQFIDAVKQTAL  164 (227)
Q Consensus        86 W~nG~ivp~~~~~I~~~d~gL~YGdgvFEglKayr~~dG~i~lFRpd~H~~RL~~Sa~rL~mp~~-~~e~l~~~i~~lV~  164 (227)
                      |.||+++|.+++.|++.|++|+||||||||||++   +|  ++|++++|++||.+||++|+||.+ +.+++.+.+.++++
T Consensus         1 ~~nG~~~~~~~~~i~~~d~g~~~G~gvFEt~r~~---~g--~~~~l~~Hl~RL~~Sa~~l~~~~~~~~~~l~~~i~~~~~   75 (270)
T cd01558           1 YLNGEYVPREEAKVSVFDRGFLFGDGVYEVIRVY---NG--KPFALDEHLDRLYRSAKELRIDIPYTREELKELIRELVA   75 (270)
T ss_pred             CcCCeEeEHHHCccccccchhcccceEEEEEEEE---CC--EEecHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHH
Confidence            8899999999999999999999999999999999   99  578999999999999999999966 89999999999999


Q ss_pred             hcCCcCCCCCCccEEEEEEEEecCCccccCCCC--CcEEEEEEeecCC
Q 027144          165 ANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAP--EYTFLVFASPVGN  210 (227)
Q Consensus       165 ~n~~wvP~~~~~slYIRP~v~~~~~~lGv~ps~--~~~f~I~~sP~g~  210 (227)
                      .|..       ...++|+.++++.+..|+.+..  .+.++|++.|.++
T Consensus        76 ~~~~-------~~~~~~~~~t~g~~~~~~~~~~~~~~~~~i~~~~~~~  116 (270)
T cd01558          76 KNEG-------GEGDVYIQVTRGVGPRGHDFPKCVKPTVVIITQPLPL  116 (270)
T ss_pred             HcCC-------CCceEEEEEEeCCCccCCCCCCCCCCEEEEEEEecCC
Confidence            9864       3344555557776666665532  5678888888764

It plays a major role in the synthesis of bacterial cell wall components like D-alanine and D-glutamate in addition to other D-amino acids. The enzyme like other members of this superfamily requires PLP as a cofactor. Members of this subgroup are found in all three forms of life.

>PRK13356 aminotransferase; Provisional

Probab=99.86  E-value=2.7e-21  Score=172.90  Aligned_cols=113  Identities=21%  Similarity=0.350  Sum_probs=94.8

Q ss_pred             eEEcCeEeeCCCcccCcCCcceeecCeEEeEEEEEEcCCCeEEeeChhhHHHHHHHhHhhcCCCCC-CHHHHHHHHHHHH
Q 027144           85 YFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSP-SIDQFIDAVKQTA  163 (227)
Q Consensus        85 ~W~nG~ivp~~~~~I~~~d~gL~YGdgvFEglKayr~~dG~i~lFRpd~H~~RL~~Sa~rL~mp~~-~~e~l~~~i~~lV  163 (227)
                      .|.||++++.+.+.|++.|+||+||||||||+|+|   +|  ++|++++|++||.+||++|+|+.+ +.+++.+.+.+++
T Consensus         9 ~~~nG~~~~~~~~~i~~~drg~~yGdgvFEtir~~---~g--~~~~l~~Hl~RL~~Sa~~L~i~~~~~~~~l~~~i~~~i   83 (286)
T PRK13356          9 TFFDGEWHEGNVPIMGPADHAAWLGSTVFDGARAF---EG--VTPDLDLHCARVNRSAEALGLKPTVSAEEIEALAREGL   83 (286)
T ss_pred             EEECCEEcchhhcccccccchhhhcceeEEEEEEe---cC--CCCCHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHH
Confidence            79999999999999999999999999999999999   89  468899999999999999999865 8999999999999


Q ss_pred             HhcCCcCCCCCCccEEEEEEEEecCCcc-ccCCCC-CcEEEEEEeec
Q 027144          164 LANKRWVPPPGKGSLYIRPLLVGSGPIL-GLAPAP-EYTFLVFASPV  208 (227)
Q Consensus       164 ~~n~~wvP~~~~~slYIRP~v~~~~~~l-Gv~ps~-~~~f~I~~sP~  208 (227)
                      +.|..      ..++|||++++++.+.. |+.+.+ ...+++...+.
T Consensus        84 ~~~~~------~~~~~ir~~v~rg~g~~~~~~~~~~~~~~~~~~~~~  124 (286)
T PRK13356         84 KRFDP------DTALYIRPMYWAEDGFASGVAPDPESTRFALCLEEA  124 (286)
T ss_pred             HHcCC------CCcEEEEEEEEeccCcccCcCCCcCCceEEEEEEcc
Confidence            99864      24689999999986644 444433 34445555543

>PRK07650 4-amino-4-deoxychorismate lyase; Provisional

Probab=99.86  E-value=4e-21  Score=171.37  Aligned_cols=114  Identities=22%  Similarity=0.331  Sum_probs=101.4

Q ss_pred             eEEcCeEeeCCCcccCcCCcceeecCeEEeEEEEEEcCCCeEEeeChhhHHHHHHHhHhhcCCCCC-CHHHHHHHHHHHH
Q 027144           85 YFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSP-SIDQFIDAVKQTA  163 (227)
Q Consensus        85 ~W~nG~ivp~~~~~I~~~d~gL~YGdgvFEglKayr~~dG~i~lFRpd~H~~RL~~Sa~rL~mp~~-~~e~l~~~i~~lV  163 (227)
                      +|.||+++|..++.+++.|+|++||||||||||+|   +|+  +|++++|++||.+||+.|+|+.+ +.+.+.+.+.+++
T Consensus         2 ~~~nG~~~~~~~~~v~~~drg~~~GdgvFEt~r~~---~g~--~~~l~~Hl~RL~~Sa~~l~~~~~~~~~~l~~~l~~~~   76 (283)
T PRK07650          2 IYVNGQYVEEEEARISPFDHGYLYGLGVFETFRIY---NGH--PFLLDDHYDRLNDALDTLQIEWTMTKDEVLLILKNLL   76 (283)
T ss_pred             EEECCEEeEHHHCeecccccccccccEEEEEEEEE---CCE--EEcHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHH
Confidence            69999999999999999999999999999999999   994  68899999999999999999976 7999999999999


Q ss_pred             HhcCCcCCCCCCccEEEEEEEEecCCccccCCCC--CcEEEEEEeecCC
Q 027144          164 LANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAP--EYTFLVFASPVGN  210 (227)
Q Consensus       164 ~~n~~wvP~~~~~slYIRP~v~~~~~~lGv~ps~--~~~f~I~~sP~g~  210 (227)
                      +.++.       .++|||++++++.+.+|+.+..  .+.++|+.+|..+
T Consensus        77 ~~~~~-------~~~~iRl~v~rg~~~~~~~~~~~~~~~~~i~~~~~~~  118 (283)
T PRK07650         77 EKNGL-------ENAYVRFNVSAGIGEIGLQTEMYEEPTVIVYMKPLAP  118 (283)
T ss_pred             HhcCC-------CcEEEEEEEEeCCCCCCCCCCCCCCCEEEEEEEcCCC
Confidence            98764       5789999999987777776543  5788888888743

>TIGR01121 D_amino_aminoT D-amino acid aminotransferase

Probab=99.86  E-value=4.2e-21  Score=170.82  Aligned_cols=113  Identities=14%  Similarity=0.217  Sum_probs=97.1

Q ss_pred             eEEcCeEeeCCCcccCcCCcceeecCeEEeEEEEEEcCCCeEEeeChhhHHHHHHHhHhhcCCCCC-CHHHHHHHHHHHH
Q 027144           85 YFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSP-SIDQFIDAVKQTA  163 (227)
Q Consensus        85 ~W~nG~ivp~~~~~I~~~d~gL~YGdgvFEglKayr~~dG~i~lFRpd~H~~RL~~Sa~rL~mp~~-~~e~l~~~i~~lV  163 (227)
                      .|.||+++|.+++.|++.|++|+||||||||||+|   +|  .+|++++|++||++||++|+|+.+ +.|.+.+.|.+++
T Consensus         2 ~~~nG~~~~~~~~~i~~~drgl~yGdgvFEtir~~---~g--~~~~l~~H~~RL~~Sa~~l~i~~~~~~~~l~~~i~~~~   76 (276)
T TIGR01121         2 VLWNGQLVEREEAKIDIEDRGYQFGDGVYEVIRVY---NG--KLFTVNEHIDRLYASAAKIRIDIPYTKEELHQLLHELV   76 (276)
T ss_pred             EEECCEEeEHHHCeecccccccccccEEEEEEEEE---CC--EEeChHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHH
Confidence            69999999999999999999999999999999999   99  578999999999999999999976 8999999999999


Q ss_pred             HhcCCcCCCCCCccEEEEEEEEecCCccccCC-CC--CcEEEEEEeecC
Q 027144          164 LANKRWVPPPGKGSLYIRPLLVGSGPILGLAP-AP--EYTFLVFASPVG  209 (227)
Q Consensus       164 ~~n~~wvP~~~~~slYIRP~v~~~~~~lGv~p-s~--~~~f~I~~sP~g  209 (227)
                      +.|..       .+++||+.++++....|..+ ..  .+.++++..|.+
T Consensus        77 ~~~~~-------~~~~irl~~~rg~~~~~~~~~~~~~~~~~~~~~~~~~  118 (276)
T TIGR01121        77 EKNNL-------NTGHVYFQVTRGVAPRNHQFPAGTVKPVITAYTKEVP  118 (276)
T ss_pred             HhcCC-------CceEEEEEEEcCCCCcCCCCCCCCCCcEEEEEEeccc
Confidence            99875       56889999988765555442 22  356667777654

Specificity is broad for various D-amino acids, and differs among members of the family; the family is designated equivalog, but with this caveat attached.

>PLN02845 Branched-chain-amino-acid aminotransferase-like protein

Probab=99.85  E-value=5.5e-21  Score=175.49  Aligned_cols=113  Identities=19%  Similarity=0.219  Sum_probs=100.6

Q ss_pred             eEEcCeEeeCCCcccCcCCcceeecCeEEeEEEEEEcCCCeEEeeChhhHHHHHHHhHhhcCCCCC-CHHHHHHHHHHHH
Q 027144           85 YFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSP-SIDQFIDAVKQTA  163 (227)
Q Consensus        85 ~W~nG~ivp~~~~~I~~~d~gL~YGdgvFEglKayr~~dG~i~lFRpd~H~~RL~~Sa~rL~mp~~-~~e~l~~~i~~lV  163 (227)
                      +|.||+++|.+++.|++.|+||+||||||||||++   +|  .+|++++|++||.+||++|+|+.+ +.+++.+.+.+++
T Consensus        43 ~~~nG~~v~~~~a~i~~~Drgl~~GdGvFETirv~---~G--~~~~le~Hl~RL~~Sa~~L~i~~p~~~~~l~~~i~~~i  117 (336)
T PLN02845         43 SVVGGITTDPAAMVIPLDDHMVHRGHGVFDTATIR---DG--HLYELDAHLDRFLRSAAKAKIPLPFDRATLRRILLQTV  117 (336)
T ss_pred             EEECCEEccHHHCcccccccceeecceEEEEEEEE---CC--EEcCHHHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHH
Confidence            79999999999999999999999999999999999   99  578999999999999999999977 8999999999999


Q ss_pred             HhcCCcCCCCCCccEEEEEEEEecCCccccCCC--CCcEEEEEEeecC
Q 027144          164 LANKRWVPPPGKGSLYIRPLLVGSGPILGLAPA--PEYTFLVFASPVG  209 (227)
Q Consensus       164 ~~n~~wvP~~~~~slYIRP~v~~~~~~lGv~ps--~~~~f~I~~sP~g  209 (227)
                      ++|..       .+++||+.++++.+.+++.+.  ..+.+++++.|.+
T Consensus       118 ~~~~~-------~~~~irl~vtrG~g~~~~~~~~~~~~~~~i~~~~~~  158 (336)
T PLN02845        118 AASGC-------RNGSLRYWLSAGPGGFSLSPSGCSEPAFYAVVIEDT  158 (336)
T ss_pred             HhcCC-------CcEEEEEEEEeCCCCCCCCCCCCCCCEEEEEEcccc
Confidence            99865       578999999998776666543  3577888887754

>PRK12400 D-amino acid aminotransferase; Reviewed

Probab=99.84  E-value=1.7e-20  Score=168.17  Aligned_cols=116  Identities=15%  Similarity=0.127  Sum_probs=96.3

Q ss_pred             eccceEEcCeEeeCC--CcccCcCCcceeecCeEEeEEEEEEcCCCeEEeeChhhHHHHHHHhHhhcCCCCC-CHHHHHH
Q 027144           81 CSNDYFEKGRLSRYG--KIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSP-SIDQFID  157 (227)
Q Consensus        81 ~~~~~W~nG~ivp~~--~~~I~~~d~gL~YGdgvFEglKayr~~dG~i~lFRpd~H~~RL~~Sa~rL~mp~~-~~e~l~~  157 (227)
                      |+.-+|.||+++|.+  +..|++.|+||+||||||||||+|   +|+  +|++++|++||.+||++|+|+.+ +.+++.+
T Consensus         3 ~~~~~~~ng~~v~~~~~~~~i~~~drgl~yGdgvFEtir~~---~G~--~~~l~~Hl~RL~~Sa~~L~i~~p~~~~~l~~   77 (290)
T PRK12400          3 YERFVLWNDAVIDTTKQKTYIELEERGLQFGDGVYEVIRLY---KGN--FHLLDPHITRLYRSMEEIELTLPFSKAELIT   77 (290)
T ss_pred             cccEEEECCEEechHHcCceeccccchhhhcceEEEEEEEE---CCE--ecccHHHHHHHHHHHHHhCCCCCCCHHHHHH
Confidence            333489999999999  455999999999999999999999   994  67789999999999999999977 7999999


Q ss_pred             HHHHHHHhcCCcCCCCCCccEEEEEEEEecCCccccCCCC--CcEEEEEEee
Q 027144          158 AVKQTALANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAP--EYTFLVFASP  207 (227)
Q Consensus       158 ~i~~lV~~n~~wvP~~~~~slYIRP~v~~~~~~lGv~ps~--~~~f~I~~sP  207 (227)
                      .+.++++.|+.      ...++||+.++++.+..|..++.  .+.+++++.|
T Consensus        78 ~l~~~~~~~~~------~~~~~iri~v~rG~~~~~~~~~~~~~~~~~~~~~~  123 (290)
T PRK12400         78 LLYKLIENNNF------HEDGTIYLQVSRGVQARTHTFSYDVPPTIYAYITK  123 (290)
T ss_pred             HHHHHHHhcCC------CCCEEEEEEEEeCCCCCCCCCCCCCCcEEEEEEec
Confidence            99999999863      13678999999987666665432  4566666654

>PRK07849 4-amino-4-deoxychorismate lyase; Provisional

Probab=99.82  E-value=8.4e-20  Score=164.24  Aligned_cols=111  Identities=21%  Similarity=0.202  Sum_probs=95.5

Q ss_pred             eEEcC-----eEeeCCCcccCcCCcceeecCeEEeEEEEEEcCCCeEEeeChhhHHHHHHHhHhhcCCCCCCHHHHHHHH
Q 027144           85 YFEKG-----RLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAV  159 (227)
Q Consensus        85 ~W~nG-----~ivp~~~~~I~~~d~gL~YGdgvFEglKayr~~dG~i~lFRpd~H~~RL~~Sa~rL~mp~~~~e~l~~~i  159 (227)
                      +|.||     +++|.+++.|++.|+|++||||||||||++   +|+  ++.+++|++||.+||++|+|+.++.++|.++|
T Consensus         9 ~~~ng~~~~~~~~~~~~a~i~~~drg~~~GdgvFEt~rv~---~g~--i~~l~~Hl~RL~~Sa~~l~i~~~~~~~l~~~i   83 (292)
T PRK07849          9 VTLDPYGGSERVHDPSAPLLHADDLAAVRGDGVFETLLVR---DGR--PCNLEAHLERLARSAALLDLPEPDLDRWRRAV   83 (292)
T ss_pred             EEECCCCccceEechHHCCccchhcchhccceEEEEEEEE---CCE--ECCHHHHHHHHHHHHHhcCCCCCCHHHHHHHH
Confidence            79999     999999999999999999999999999999   995  67789999999999999999999999999999


Q ss_pred             HHHHHhcCCcCCCCCCccEEEEEEEEecCCccccCCCCCcEEEEEEeecCC
Q 027144          160 KQTALANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAPEYTFLVFASPVGN  210 (227)
Q Consensus       160 ~~lV~~n~~wvP~~~~~slYIRP~v~~~~~~lGv~ps~~~~f~I~~sP~g~  210 (227)
                      .++++.+..     +...++||++++++.+..+     ++.++|.+.|+..
T Consensus        84 ~~~v~~~~~-----~~~~~~iRl~v~~g~~~~~-----~~~~~i~~~p~~~  124 (292)
T PRK07849         84 ELAIEEWRA-----PEDEAALRLVYSRGRESGG-----APTAWVTVSPVPE  124 (292)
T ss_pred             HHHHHHhcC-----CCCCeEEEEEEeCCCCCCC-----CCeEEEEEeecCc
Confidence            999998741     1146899999998765332     4567777777653

>TIGR03461 pabC_Proteo aminodeoxychorismate lyase

Probab=99.82  E-value=1.2e-19  Score=159.56  Aligned_cols=110  Identities=25%  Similarity=0.353  Sum_probs=93.6

Q ss_pred             EEcCeEeeCCCcccCcCCcceeecCeEEeEEEEEEcCCCeEEeeChhhHHHHHHHhHhhcCCCCCCHHHHHHHHHHHHHh
Q 027144           86 FEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALA  165 (227)
Q Consensus        86 W~nG~ivp~~~~~I~~~d~gL~YGdgvFEglKayr~~dG~i~lFRpd~H~~RL~~Sa~rL~mp~~~~e~l~~~i~~lV~~  165 (227)
                      |.||+.    +..|++.|+||+||||||||||++   +|+  +|++++|++||.+||+.|+||.++.+++.+.+.++++.
T Consensus         1 ~~nG~~----~~~i~~~d~g~~~G~gvFEt~r~~---~G~--~~~l~~Hl~RL~~Sa~~l~~~~~~~~~l~~~~~~~~~~   71 (261)
T TIGR03461         1 WVNGVL----QTQISVSDRGLQYGDGCFTTAKVR---NGK--IELLDLHLERLQDAAARLGIPLPDWDALREEMAQLAAG   71 (261)
T ss_pred             CcCCcc----cCccCcccccccccceeEEEEEEE---CCE--eccHHHHHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHh
Confidence            789995    678999999999999999999999   994  68889999999999999999998999999999999987


Q ss_pred             cCCcCCCCCCccEEEEEEEEecCCccccCCC--CCcEEEEEEeecCCCcc
Q 027144          166 NKRWVPPPGKGSLYIRPLLVGSGPILGLAPA--PEYTFLVFASPVGNYFK  213 (227)
Q Consensus       166 n~~wvP~~~~~slYIRP~v~~~~~~lGv~ps--~~~~f~I~~sP~g~Y~~  213 (227)
                      +.         +++||+.++++....|+.+.  .++.++|.+.|+.+++.
T Consensus        72 ~~---------~~~ir~~v~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~  112 (261)
T TIGR03461        72 YS---------LGVLKVIISRGSGGRGYSPPGCSDPTRIISVSPYPAHYS  112 (261)
T ss_pred             CC---------CeEEEEEEecCCCCCCCCCCCCCCCcEEEEeccCcccCh
Confidence            63         37899999987665565543  35678888888876553

Members of this protein family are aminodeoxychorismate lyase (ADC lyase), EC 4.1.3.38, the PabC protein of PABA biosynthesis. PABA (para-aminobenzoate) is a precursor of folate, needed for de novo purine biosynthesis. This enzyme is a pyridoxal-phosphate-binding protein in the class IV aminotransferase family (pfam01063).

>PRK06092 4-amino-4-deoxychorismate lyase; Reviewed

Probab=99.80  E-value=5.6e-19  Score=156.11  Aligned_cols=110  Identities=25%  Similarity=0.327  Sum_probs=92.8

Q ss_pred             eEEcCeEeeCCCcccCcCCcceeecCeEEeEEEEEEcCCCeEEeeChhhHHHHHHHhHhhcCCCCCCHHHHHHHHHHHHH
Q 027144           85 YFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTAL  164 (227)
Q Consensus        85 ~W~nG~ivp~~~~~I~~~d~gL~YGdgvFEglKayr~~dG~i~lFRpd~H~~RL~~Sa~rL~mp~~~~e~l~~~i~~lV~  164 (227)
                      .|.||++    ...|++.|++++||||||||||++   +|+  +|++++|++||++||++|+||.++.+.+.+.+.+++.
T Consensus         2 ~~~nG~~----~~~i~~~d~g~~~GdgvFEtir~~---~g~--~~~l~~Hl~RL~~Sa~~l~~~~~~~~~~~~~l~~~~~   72 (268)
T PRK06092          2 FWINGQP----QESLSVSDRSTQYGDGCFTTARVR---DGQ--VSLLSRHLQRLQDACERLAIPLDDWAQLEQEMKQLAA   72 (268)
T ss_pred             EEECCcC----cCccCccccccccccceeeEEEEE---CCe--eccHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHh
Confidence            5899986    478999999999999999999999   994  6788999999999999999998887888888888773


Q ss_pred             hcCCcCCCCCCccEEEEEEEEecCCccccCCCC--CcEEEEEEeecCCCc
Q 027144          165 ANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAP--EYTFLVFASPVGNYF  212 (227)
Q Consensus       165 ~n~~wvP~~~~~slYIRP~v~~~~~~lGv~ps~--~~~f~I~~sP~g~Y~  212 (227)
                      .  .       .+++||+.++++.+..|+.+..  ++.++|.+.|+.++.
T Consensus        73 ~--~-------~~~~iri~v~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~  113 (268)
T PRK06092         73 E--L-------ENGVLKVIISRGSGGRGYSPAGCAAPTRILSVSPYPAHY  113 (268)
T ss_pred             h--C-------CCeEEEEEEEccCCCCCCCCCCCCCCeEEEEeccCCccC
Confidence            2  1       3589999999988777776654  568888888887655

>PRK09266 hypothetical protein; Provisional

Probab=99.78  E-value=1.5e-18  Score=153.64  Aligned_cols=110  Identities=16%  Similarity=0.106  Sum_probs=90.7

Q ss_pred             eEEcCeEeeCCCcccCcCCcceeecCeEEeEEEEEEcCCCeEEeeChhhHHHHHHHhHhhcCCCCCCHHHHHHHHHHHHH
Q 027144           85 YFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTAL  164 (227)
Q Consensus        85 ~W~nG~ivp~~~~~I~~~d~gL~YGdgvFEglKayr~~dG~i~lFRpd~H~~RL~~Sa~rL~mp~~~~e~l~~~i~~lV~  164 (227)
                      +|.||+++|.+++.     ++++||||||||||++   +|  ++|++++|++||.+||++|+++.++.+++.+.+.++++
T Consensus         5 ~~~nG~~~~~~~a~-----~~~~~GdgvFETir~~---~g--~~~~l~~Hl~RL~~sa~~l~~~~~~~~~l~~~l~~~~~   74 (266)
T PRK09266          5 IELNGRPATAEDLA-----ALALANYGHFTSMQVR---DG--RVRGLDLHLQRLRRASRELFGAALDDDRVRAQLRAALA   74 (266)
T ss_pred             EEECCEECCHHHhh-----hHhhccceEEEEEEEE---CC--EEcCHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHh
Confidence            79999999998876     4999999999999999   99  46789999999999999997776789999999999994


Q ss_pred             hcCCcCCCCCCccEEEEEEEEecCCccccCCCC-CcEEEEEEeecCCCc
Q 027144          165 ANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAP-EYTFLVFASPVGNYF  212 (227)
Q Consensus       165 ~n~~wvP~~~~~slYIRP~v~~~~~~lGv~ps~-~~~f~I~~sP~g~Y~  212 (227)
                      . ..       .++|||++++++.+.+|..+.. ++.++|.+.|..++.
T Consensus        75 ~-~~-------~~~~ir~~v~r~~g~~~~~~~~~~~~~~i~~~~~~~~~  115 (266)
T PRK09266         75 A-GP-------ADASVRVTVFAPDFDFRNPLADVAPDVLVATSPPADGP  115 (266)
T ss_pred             c-CC-------CcEEEEEEEEecCcccCCCCCCCCceEEEEEecCCcCC
Confidence            3 22       4689999999876667764432 577888888765443

>cd01559 ADCL_like ADCL_like: 4-Amino-4-deoxychorismate lyase: is a member of the fold-type IV of PLP dependent enzymes that converts 4-amino-4-deoxychorismate (ADC) to p-aminobenzoate and pyruvate

Probab=99.76  E-value=5.4e-18  Score=148.34  Aligned_cols=95  Identities=32%  Similarity=0.467  Sum_probs=82.6

Q ss_pred             CcceeecCeEEeEEEEEEcCCCeEEeeChhhHHHHHHHhHhhcCCCCCCHHHHHHHHHHHHHhcCCcCCCCCCccEEEEE
Q 027144          103 SGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGKGSLYIRP  182 (227)
Q Consensus       103 d~gL~YGdgvFEglKayr~~dG~i~lFRpd~H~~RL~~Sa~rL~mp~~~~e~l~~~i~~lV~~n~~wvP~~~~~slYIRP  182 (227)
                      |+||+||||||||||+|   +|  .+|++++|++||.+||++|+||.++.+++.+.+.++++.|..       .+++||+
T Consensus         1 Drg~~~GdgvFEt~~~~---~g--~~~~l~~Hl~RL~~Sa~~l~~~~~~~~~l~~~i~~~i~~~~~-------~~~~ir~   68 (249)
T cd01559           1 DRGFAYGDGVFETMRAL---DG--RLFLLDAHLARLERSARRLGIPEPDLPRLRAALESLLAANDI-------DEGRIRL   68 (249)
T ss_pred             CCcccccceeEEEEEEE---CC--EEccHHHHHHHHHHHHHhcCcCCCCHHHHHHHHHHHHHhCCC-------CceEEEE
Confidence            78999999999999999   99  478899999999999999999966999999999999999875       5689999


Q ss_pred             EEEecCCccccCCC--CCcEEEEEEeecC
Q 027144          183 LLVGSGPILGLAPA--PEYTFLVFASPVG  209 (227)
Q Consensus       183 ~v~~~~~~lGv~ps--~~~~f~I~~sP~g  209 (227)
                      .++++.+..|+.+.  .++.++|.+.|..
T Consensus        69 ~v~rg~~~~~~~~~~~~~~~~~i~~~~~~   97 (249)
T cd01559          69 ILSRGPGGRGYAPSVCPGPALYVSVIPLP   97 (249)
T ss_pred             EEecCCCCCCCCCCCCCCCEEEEEeccCC
Confidence            99988766666544  3578888888765

Based on the information available from the crystal structure, most members of this subgroup are likely to function as dimers. The enzyme from E.Coli, the structure of which is available, is a homodimer that is folded into a small and a larger domain. The coenzyme pyridoxal 5; -phosphate resides at the interface of the two domains that is linked by a flexible loop. Members of this subgroup are found in Eukaryotes and bacteria.

>cd00449 PLPDE_IV PyridoxaL 5'-Phosphate Dependent Enzymes class IV (PLPDE_IV)

Probab=99.75  E-value=1.6e-17  Score=144.76  Aligned_cols=97  Identities=47%  Similarity=0.756  Sum_probs=85.4

Q ss_pred             CcceeecCeEEeEEEEEEcCCCeEEeeChhhHHHHHHHhHhhcCCCC-CCHHHHHHHHHHHHHhcCCcCCCCCCccEEEE
Q 027144          103 SGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPS-PSIDQFIDAVKQTALANKRWVPPPGKGSLYIR  181 (227)
Q Consensus       103 d~gL~YGdgvFEglKayr~~dG~i~lFRpd~H~~RL~~Sa~rL~mp~-~~~e~l~~~i~~lV~~n~~wvP~~~~~slYIR  181 (227)
                      |++++||||||||||++   +|  ++|++++|++||.+||+.|+|+. ++.+.+.+.+.++++.+..       .+++||
T Consensus         1 drg~~~GdgvFEt~r~~---~g--~~~~l~~Hl~RL~~sa~~l~~~~~~~~~~~~~~i~~~~~~~~~-------~~~~ir   68 (256)
T cd00449           1 DRGLHYGDGVFEGLRAG---KG--RLFRLDEHLDRLNRSAKRLGLPIPYDREELREALKELVAANNG-------ASLYIR   68 (256)
T ss_pred             CceeeccceEEEEEEEc---Cc--EEEChHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHhCCC-------CCEEEE
Confidence            78999999999999999   99  57889999999999999999995 5999999999999998754       579999


Q ss_pred             EEEEecCCccccCCC--CCcEEEEEEeecCCC
Q 027144          182 PLLVGSGPILGLAPA--PEYTFLVFASPVGNY  211 (227)
Q Consensus       182 P~v~~~~~~lGv~ps--~~~~f~I~~sP~g~Y  211 (227)
                      +.++++...+|..+.  .++.++|++.|.++|
T Consensus        69 ~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  100 (256)
T cd00449          69 PLLTRGVGGLGVAPPPSPEPTFVVFASPVGAY  100 (256)
T ss_pred             EEEEecccccCCCCCCCCCcEEEEEEeecccc
Confidence            999999877787643  368899999988765

This D-amino acid superfamily, one of five classes of PLPDE, consists of branched-chain amino acid aminotransferases (BCAT), D-amino acid transferases (DAAT), and 4-amino-4-deoxychorismate lyases (ADCL). BCAT catalyzes the reversible transamination reaction between the L-branched-chain amino and alpha-keto acids. DAAT catalyzes the synthesis of D-glutamic acid and D-alanine, and ADCL converts 4-amino-4-deoxychorismate to p-aminobenzoate and pyruvate. Except for a few enzymes, i. e., Escherichia coli and Salmonella BCATs, which are homohexamers arranged as a double trimer, the class IV PLPDEs are homodimers. Homodimer formation is required for catalytic activity.

>PRK07546 hypothetical protein; Provisional

Probab=98.75  E-value=6.4e-08  Score=83.09  Aligned_cols=66  Identities=20%  Similarity=0.253  Sum_probs=53.9

Q ss_pred             CeEEeEEEEEEcCCCeEEeeChhhHHHHHHHhHhhcCCCCCCHHHHHHHHHHHHHhcCCcCCCCCCccEEEEEEEEecC
Q 027144          110 QGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGKGSLYIRPLLVGSG  188 (227)
Q Consensus       110 dgvFEglKayr~~dG~i~lFRpd~H~~RL~~Sa~rL~mp~~~~e~l~~~i~~lV~~n~~wvP~~~~~slYIRP~v~~~~  188 (227)
                      -++||||+++  ++|  .++++++|++||.+||+.|++|.+ .+.+.+.+.++++.+ .       +.++||.++.+++
T Consensus         4 ~~lfETi~~~--~~G--~~~~l~~Hl~RL~~sa~~l~~~~~-~~~l~~~l~~~~~~~-~-------~~~~vrl~~~~~g   69 (209)
T PRK07546          4 FELIETLRWE--PGA--GFPRLDRHLARLERSARALGFPCD-PAAVRAKLAEAVAGA-Q-------GPLRLRLTLARDG   69 (209)
T ss_pred             ccEEEEEEEe--CCC--CcccHHHHHHHHHHHHHHhCCCCC-HHHHHHHHHHHhhcc-C-------CCeEEEEEEcCCC
Confidence            3699999987  256  467789999999999999999975 678889999988763 2       4578999988764

>PF01063 Aminotran_4: Aminotransferase class IV; InterPro: IPR001544 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue

Probab=98.41  E-value=7.6e-07  Score=76.12  Aligned_cols=62  Identities=27%  Similarity=0.398  Sum_probs=52.6

Q ss_pred             eChhhHHHHHHHhHhhcCCCCC-CHHHHHHHHHHHHHhcCCcCCCCCCccEEEEEEEEecCCccccCCCC
Q 027144          129 FRPDQNAIRLQTGAERMCMPSP-SIDQFIDAVKQTALANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAP  197 (227)
Q Consensus       129 FRpd~H~~RL~~Sa~rL~mp~~-~~e~l~~~i~~lV~~n~~wvP~~~~~slYIRP~v~~~~~~lGv~ps~  197 (227)
                      |++++|++||.+||+.+ ++.+ +.+.+.+.+.++++.+..      .++.|||++++++.+..+..+..
T Consensus         1 f~l~~Hl~Rl~~S~~~l-~~~~~~~~~l~~~i~~~~~~~~~------~~~~~ir~~v~~g~~~~~~~~~~   63 (231)
T PF01063_consen    1 FFLDEHLERLRRSARAL-IGLPFSREELREIIQELLEANPD------QGEGYIRITVTRGGGPLGGSPPE   63 (231)
T ss_dssp             ETHHHHHHHHHHHHHHT-TTHSSHHHHHHHHHHHHHHHTTS------SSSEEEEEEEEETSSSSSSSECS
T ss_pred             CCHHHHHHHHHHHHHHH-ccCCcCHHHHHHHHHHHHHHcCC------CCCcEEEEEEEcCCCCcCccCcc
Confidence            78999999999999999 5544 889999999999999872      15679999999998877776654

On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-IV, currently consists of proteins of about 270 to 415 amino-acid residues that share a few regions of sequence similarity. Surprisingly, the best conserved region does not include the lysine residue to which the pyridoxal-phosphate group is known to be attached, in ilvE, but is located some 40 residues at the C terminus side of the pyridoxal-phosphate-lysine. The D-amino acid transferases (D-AAT), which are among the members of this entry, are required by bacteria to catalyse the synthesis of D-glutamic acid and D-alanine, which are essential constituents of bacterial cell wall and are the building block for other D-amino acids. Despite the difference in the structure of the substrates, D-AATs and L-ATTs have strong similarity [, ]. ; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1EKV_A 2HGX_A 1EKP_A 1KTA_B 1KT8_B 2A1H_B 2HDK_A 2HGW_B 1EKF_B 2HG8_A ....

>PRK07101 hypothetical protein; Provisional

Probab=98.31  E-value=1.5e-06  Score=73.91  Aligned_cols=58  Identities=17%  Similarity=0.246  Sum_probs=45.4

Q ss_pred             eEEeEEEEEEcCCCeEEeeChhhHHHHHHHhHhhcCCCC-C-CHHHHHHHHHHHHHhcCCcCCCCCCccEEEEEEE
Q 027144          111 GLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPS-P-SIDQFIDAVKQTALANKRWVPPPGKGSLYIRPLL  184 (227)
Q Consensus       111 gvFEglKayr~~dG~i~lFRpd~H~~RL~~Sa~rL~mp~-~-~~e~l~~~i~~lV~~n~~wvP~~~~~slYIRP~v  184 (227)
                      ++|||||++   +|+  ++++++|++||.+||+.+++.. + +.+.+.+.+.++    .       ++..++|.++
T Consensus         4 ~l~ETir~~---~g~--~~~l~~Hl~RL~~Sa~~l~~~~~~~~~~~~~~~~~~~----~-------~~~~r~rl~~   63 (187)
T PRK07101          4 PLFETIAIE---DGE--IQNLSYHQQRYERTLAEFYGKEAPFDLAEIIQPPTEL----Q-------EGLVRCRIDY   63 (187)
T ss_pred             cceEEEeee---CCe--eccHHHHHHHHHHHHHHHcccCCcccHHHHhhchhhh----c-------CCCEEEEEEe
Confidence            699999999   994  6889999999999999998865 3 777777777554    1       1346677766

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	227
4dqn_A	345	Crystal Structure Of The Branched-Chain Aminotransf		2e-38
3uyy_A	358	Crystal Structures Of Branched-Chain Aminotransfera		1e-33
3jz6_A	373	Crystal Structure Of Mycobacterium Smegmatis Branch		6e-32
3dtf_A	372	Structural Analysis Of Mycobacterial Branched Chain		6e-32
3ht5_A	368	Crystal Structure Of Ilve A Branched Chain Amino Ac		2e-28
2cog_A	386	Crystal Structure Of Oxidized Human Cytosolic Branc		8e-23
2abj_A	366	Crystal Structure Of Human Branched Chain Amino Aci		9e-23
1ekf_A	365	Crystallographic Structure Of Human Branched Chain		2e-22
2hg8_A	365	Crystal Structure Of Cys315ala Mutant Of Human Mito		3e-22
2hgw_A	365	Crystal Structure Of Cys318ala Mutant Of Human Mito		3e-22
2hdk_A	365	Crystal Structure Of Cys315ala-Cys318ala Mutant Of		3e-22
2hhf_B	365	X-ray Crystal Structure Of Oxidized Human Mitochond		5e-21
2hhf_A	365	X-ray Crystal Structure Of Oxidized Human Mitochond		4e-20
1i1k_A	309	Crystal Structure Of Eschelichia Coli Branched-chai		4e-07
1a3g_A	308	Branched-chain Amino Acid Aminotransferase From Esc		7e-07
3u0g_A	328	Crystal Structure Of Branched-Chain Amino Acid Amin		1e-06
1wrv_A	308	Crystal Structure Of T.Th.Hb8 Branched-Chain Amino		2e-04

>pdb|4DQN|A Chain A, Crystal Structure Of The Branched-Chain Aminotransferase From Streptococcus Mutans Length = 345

Iteration: 1
 Score =  155 bits (392), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 75/154 (48%), Positives = 101/154 (65%), Gaps = 1/154 (0%)
Query: 61  MDWDNLGFGLTPADYMYTMKCSNDYFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYR 120
           +DW NLGF      + Y     +  ++ G+L+    + +S SS  L+YGQ  FEG+KAYR
Sbjct: 9   LDWKNLGFEYHKLPFRYISYYKDGKWDDGKLTEDATLHISESSPALHYGQEAFEGLKAYR 68
Query: 121 KEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGKG-SLY 179
            +DG + LFRP+ NA RLQ  A+R+ MP    D+FIDA KQ   AN+ +VPP G G +LY
Sbjct: 69  TKDGSVQLFRPNMNAERLQRTADRLLMPQVPTDKFIDAAKQVVRANEEYVPPYGTGATLY 128
Query: 180 IRPLLVGSGPILGLAPAPEYTFLVFASPVGNYFK 213
           +RPLL+G G ++G+ PA EY F +FA PVGNYFK
Sbjct: 129 LRPLLIGVGDVIGVHPADEYIFTIFAMPVGNYFK 162

>pdb|3UYY|A Chain A, Crystal Structures Of Branched-Chain Aminotransferase From Deinococcus Radiodurans Complexes With Alpha-Ketoisocaproate And L-Glutamate Suggest Its Radio-Resistance For Catalysis Length = 358

Iteration: 1
 Score =  139 bits (350), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 70/154 (45%), Positives = 93/154 (60%), Gaps = 1/154 (0%)
Query: 61  MDWDNLGFGLTPADYMYTMKCSNDYFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYR 120
           +DW  LGF     D  Y     +  ++ G L+   +I L+  S  L+YGQ  FEG+KAYR
Sbjct: 24  IDWSTLGFSYIRTDLRYLAHWKDGEWDAGTLTEDNQIHLAEGSTALHYGQQCFEGLKAYR 83
Query: 121 KEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGK-GSLY 179
             DG + LFRPDQNA R++    R+ MP  S +QFIDA  Q   AN+ ++PP G  GSLY
Sbjct: 84  CADGSINLFRPDQNAARMRMSCRRLLMPELSDEQFIDACLQVVRANEHFLPPYGTGGSLY 143
Query: 180 IRPLLVGSGPILGLAPAPEYTFLVFASPVGNYFK 213
           +RP ++G G  +G+  APE+ F VF  PVG YFK
Sbjct: 144 LRPFVIGVGDNIGVRTAPEFIFSVFCVPVGPYFK 177

>pdb|3JZ6|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Branched Chain Aminotransferase In Complex With Pyridoxal-5'-Phosphate At 1.9 Angstrom. Length = 373

Iteration: 1
 Score =  134 bits (336), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 66/151 (43%), Positives = 100/151 (66%), Gaps = 2/151 (1%)
Query: 65  NLGFGLTPADYMYTMKCSNDY-FEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKED 123
           N GFG    D+M ++  + D  +   ++  YG I+L PS+ VL+YGQ +FEG+KAYR  D
Sbjct: 33  NPGFGKYYTDHMVSIDYTVDEGWHNAQVIPYGPIQLDPSAIVLHYGQEIFEGLKAYRWAD 92
Query: 124 GQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPP-GKGSLYIRP 182
           G +V FRP+ NA RLQ+ A R+ +P    + FI++++Q    +++WVPP  G+ SLY+RP
Sbjct: 93  GSIVSFRPEANAARLQSSARRLAIPELPEEVFIESLRQLIAVDEKWVPPAGGEESLYLRP 152
Query: 183 LLVGSGPILGLAPAPEYTFLVFASPVGNYFK 213
            ++ + P LG+ P+ EY +L+ ASP G YFK
Sbjct: 153 FVIATEPGLGVRPSNEYRYLLIASPAGAYFK 183

>pdb|3DTF|A Chain A, Structural Analysis Of Mycobacterial Branched Chain Aminotransferase- Implications For Inhibitor Design Length = 372

Iteration: 1
 Score =  134 bits (336), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 66/151 (43%), Positives = 100/151 (66%), Gaps = 2/151 (1%)
Query: 65  NLGFGLTPADYMYTMKCSNDY-FEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKED 123
           N GFG    D+M ++  + D  +   ++  YG I+L PS+ VL+YGQ +FEG+KAYR  D
Sbjct: 32  NPGFGKYYTDHMVSIDYTVDEGWHNAQVIPYGPIQLDPSAIVLHYGQEIFEGLKAYRWAD 91
Query: 124 GQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPP-GKGSLYIRP 182
           G +V FRP+ NA RLQ+ A R+ +P    + FI++++Q    +++WVPP  G+ SLY+RP
Sbjct: 92  GSIVSFRPEANAARLQSSARRLAIPELPEEVFIESLRQLIAVDEKWVPPAGGEESLYLRP 151
Query: 183 LLVGSGPILGLAPAPEYTFLVFASPVGNYFK 213
            ++ + P LG+ P+ EY +L+ ASP G YFK
Sbjct: 152 FVIATEPGLGVRPSNEYRYLLIASPAGAYFK 182

>pdb|3HT5|A Chain A, Crystal Structure Of Ilve A Branched Chain Amino Acid Transaminase From Mycobacterium Tuberculosis Length = 368

Iteration: 1
 Score =  121 bits (304), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 63/149 (42%), Positives = 92/149 (61%), Gaps = 2/149 (1%)
Query: 67  GFGLTPADYMYTMKCSNDY-FEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQ 125
           GFG    D+M ++  +    +   R+  YG IEL PS+ VL+Y Q +FEG+KAYR  DG 
Sbjct: 30  GFGKYHTDHMVSIDYAEGRGWHNARVIPYGPIELDPSAIVLHYAQEVFEGLKAYRWADGS 89
Query: 126 LVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVP-PPGKGSLYIRPLL 184
           +V FR D NA RL++ A R+ +P      FI++++Q    +K WVP   G+ +LY+RP +
Sbjct: 90  IVSFRADANAARLRSSARRLAIPELPDAVFIESLRQLIAVDKAWVPGAGGEEALYLRPFI 149
Query: 185 VGSGPILGLAPAPEYTFLVFASPVGNYFK 213
             + P LG+ PA +Y +L+ ASP G YFK
Sbjct: 150 FATEPGLGVRPATQYRYLLIASPAGAYFK 178

>pdb|2COG|A Chain A, Crystal Structure Of Oxidized Human Cytosolic Branched-Chain Aminotransferase Complexed With 4-Methylvalerate Length = 386

Iteration: 1
 Score =  103 bits (257), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 54/158 (34%), Positives = 86/158 (54%), Gaps = 1/158 (0%)
Query: 62  DWDNLGFGLTPADYMYTMKCSNDY-FEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYR 120
           D +NL FG    D+M T++ S+++ +EK  +     + L P S  L+Y   LFEG+KA+R
Sbjct: 43  DPNNLVFGTVFTDHMLTVEWSSEFGWEKPHIKPLQNLSLHPGSSALHYAVELFEGLKAFR 102
Query: 121 KEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGKGSLYI 180
             D ++ LF+P+ N  R+   A R  +P    ++ ++ ++Q    ++ WVP     SLYI
Sbjct: 103 GVDNKIRLFQPNLNMDRMYRSAVRATLPVFDKEELLECIQQLVKLDQEWVPYSTSASLYI 162
Query: 181 RPLLVGSGPILGLAPAPEYTFLVFASPVGNYFKVAAFS 218
           RP  +G+ P LG+    +    V  SPVG YF    F+
Sbjct: 163 RPTFIGTEPSLGVKKPTKALLFVLLSPVGPYFSSGTFN 200

>pdb|2ABJ|A Chain A, Crystal Structure Of Human Branched Chain Amino Acid Transaminase In A Complex With An Inhibitor, C16h10n2o4f3scl, And Pyridoxal 5' Phosphate. Length = 366

Iteration: 1
 Score =  103 bits (257), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 54/158 (34%), Positives = 86/158 (54%), Gaps = 1/158 (0%)
Query: 62  DWDNLGFGLTPADYMYTMKCSNDY-FEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYR 120
           D +NL FG    D+M T++ S+++ +EK  +     + L P S  L+Y   LFEG+KA+R
Sbjct: 23  DPNNLVFGTVFTDHMLTVEWSSEFGWEKPHIKPLQNLSLHPGSSALHYAVELFEGLKAFR 82
Query: 121 KEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGKGSLYI 180
             D ++ LF+P+ N  R+   A R  +P    ++ ++ ++Q    ++ WVP     SLYI
Sbjct: 83  GVDNKIRLFQPNLNMDRMYRSAVRATLPVFDKEELLECIQQLVKLDQEWVPYSTSASLYI 142
Query: 181 RPLLVGSGPILGLAPAPEYTFLVFASPVGNYFKVAAFS 218
           RP  +G+ P LG+    +    V  SPVG YF    F+
Sbjct: 143 RPAFIGTEPSLGVKKPTKALLFVLLSPVGPYFSSGTFN 180

>pdb|1EKF|A Chain A, Crystallographic Structure Of Human Branched Chain Amino Acid Aminotransferase (Mitochondrial) Complexed With Pyridoxal-5'- Phosphate At 1.95 Angstroms (Orthorhombic Form) Length = 365

Iteration: 1
 Score =  102 bits (253), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 52/149 (34%), Positives = 85/149 (57%)
Query: 64  DNLGFGLTPADYMYTMKCSNDYFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKED 123
           + L FG T  D+M  ++ ++  + + R+  +  + L P+S  L+Y   LFEGMKA++ +D
Sbjct: 26  EPLVFGKTFTDHMLMVEWNDKGWGQPRIQPFQNLTLHPASSSLHYSLQLFEGMKAFKGKD 85
Query: 124 GQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGKGSLYIRPL 183
            Q+ LFRP  N  R+   A R+C+PS    + ++ +++    +K WVP     SLY+RP+
Sbjct: 86  QQVRLFRPWLNMDRMLRSAMRLCLPSFDKLELLECIRRLIEVDKDWVPDAAGTSLYVRPV 145
Query: 184 LVGSGPILGLAPAPEYTFLVFASPVGNYF 212
           L+G+ P LG++        V   PVG YF
Sbjct: 146 LIGNEPSLGVSQPRRALLFVILCPVGAYF 174

>pdb|2HG8|A Chain A, Crystal Structure Of Cys315ala Mutant Of Human Mitochondrial Branched Chain Aminotransferase Complexed With Its Substrate Mimic, N-Methyl Leucine. Length = 365

Iteration: 1
 Score =  101 bits (252), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 52/149 (34%), Positives = 85/149 (57%)
Query: 64  DNLGFGLTPADYMYTMKCSNDYFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKED 123
           + L FG T  D+M  ++ ++  + + R+  +  + L P+S  L+Y   LFEGMKA++ +D
Sbjct: 26  EPLVFGKTFTDHMLMVEWNDKGWGQPRIQPFQNLTLHPASSSLHYSLQLFEGMKAFKGKD 85
Query: 124 GQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGKGSLYIRPL 183
            Q+ LFRP  N  R+   A R+C+PS    + ++ +++    +K WVP     SLY+RP+
Sbjct: 86  QQVRLFRPWLNMDRMLRSAMRLCLPSFDKLELLECIRRLIEVDKDWVPDAAGTSLYVRPV 145
Query: 184 LVGSGPILGLAPAPEYTFLVFASPVGNYF 212
           L+G+ P LG++        V   PVG YF
Sbjct: 146 LIGNEPSLGVSQPRRALLFVILCPVGAYF 174

>pdb|2HGW|A Chain A, Crystal Structure Of Cys318ala Mutant Of Human Mitochondrial Branched Chain Aminotransferase Length = 365

Iteration: 1
 Score =  101 bits (252), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 52/149 (34%), Positives = 85/149 (57%)
Query: 64  DNLGFGLTPADYMYTMKCSNDYFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKED 123
           + L FG T  D+M  ++ ++  + + R+  +  + L P+S  L+Y   LFEGMKA++ +D
Sbjct: 26  EPLVFGKTFTDHMLMVEWNDKGWGQPRIQPFQNLTLHPASSSLHYSLQLFEGMKAFKGKD 85
Query: 124 GQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGKGSLYIRPL 183
            Q+ LFRP  N  R+   A R+C+PS    + ++ +++    +K WVP     SLY+RP+
Sbjct: 86  QQVRLFRPWLNMDRMLRSAMRLCLPSFDKLELLECIRRLIEVDKDWVPDAAGTSLYVRPV 145
Query: 184 LVGSGPILGLAPAPEYTFLVFASPVGNYF 212
           L+G+ P LG++        V   PVG YF
Sbjct: 146 LIGNEPSLGVSQPRRALLFVILCPVGAYF 174

>pdb|2HDK|A Chain A, Crystal Structure Of Cys315ala-Cys318ala Mutant Of Human Mitochondrial Branched Chain Aminotransferase Length = 365

Iteration: 1
 Score =  101 bits (252), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 52/149 (34%), Positives = 85/149 (57%)
Query: 64  DNLGFGLTPADYMYTMKCSNDYFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKED 123
           + L FG T  D+M  ++ ++  + + R+  +  + L P+S  L+Y   LFEGMKA++ +D
Sbjct: 26  EPLVFGKTFTDHMLMVEWNDKGWGQPRIQPFQNLTLHPASSSLHYSLQLFEGMKAFKGKD 85
Query: 124 GQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGKGSLYIRPL 183
            Q+ LFRP  N  R+   A R+C+PS    + ++ +++    +K WVP     SLY+RP+
Sbjct: 86  QQVRLFRPWLNMDRMLRSAMRLCLPSFDKLELLECIRRLIEVDKDWVPDAAGTSLYVRPV 145
Query: 184 LVGSGPILGLAPAPEYTFLVFASPVGNYF 212
           L+G+ P LG++        V   PVG YF
Sbjct: 146 LIGNEPSLGVSQPRRALLFVILCPVGAYF 174

>pdb|2HHF|B Chain B, X-ray Crystal Structure Of Oxidized Human Mitochondrial Branched Chain Aminotransferase (hbcatm) Length = 365

Iteration: 1
 Score = 97.4 bits (241), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 51/149 (34%), Positives = 84/149 (56%)
Query: 64  DNLGFGLTPADYMYTMKCSNDYFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKED 123
           + L FG T  D+M  ++ ++  + + R+  +  + L P+S  L+Y   LFEGMKA++ +D
Sbjct: 26  EPLVFGKTFTDHMLMVEWNDKGWGQPRIQPFQNLTLHPASSSLHYSLQLFEGMKAFKGKD 85
Query: 124 GQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGKGSLYIRPL 183
            Q+ LFRP  N  R+   A R+ +PS    + ++ +++    +K WVP     SLY+RP+
Sbjct: 86  QQVRLFRPWLNMDRMLRSAMRLXLPSFDKLELLECIRRLIEVDKDWVPDAAGTSLYVRPV 145
Query: 184 LVGSGPILGLAPAPEYTFLVFASPVGNYF 212
           L+G+ P LG++        V   PVG YF
Sbjct: 146 LIGNEPSLGVSQPRRALLFVILCPVGAYF 174

>pdb|2HHF|A Chain A, X-ray Crystal Structure Of Oxidized Human Mitochondrial Branched Chain Aminotransferase (hbcatm) Length = 365

Iteration: 1
 Score = 94.7 bits (234), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 50/149 (33%), Positives = 83/149 (55%)
Query: 64  DNLGFGLTPADYMYTMKCSNDYFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKED 123
           + L FG T  D+M  ++ ++  + + R+  +  + L P+S  L+Y   LFEGMKA++ +D
Sbjct: 26  EPLVFGKTFTDHMLMVEWNDKGWGQPRIQPFQNLTLHPASSSLHYSLQLFEGMKAFKGKD 85
Query: 124 GQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGKGSLYIRPL 183
            Q+ LFRP  N  R+   A R+ +PS    + ++ +++    +K WVP     SL +RP+
Sbjct: 86  QQVRLFRPWLNMDRMLRSAMRLXLPSFDKLELLECIRRLIEVDKDWVPDAAGTSLXVRPV 145
Query: 184 LVGSGPILGLAPAPEYTFLVFASPVGNYF 212
           L+G+ P LG++        V   PVG YF
Sbjct: 146 LIGNEPSLGVSQPRRALLFVILCPVGAYF 174

>pdb|1I1K|A Chain A, Crystal Structure Of Eschelichia Coli Branched-chain Amino Acid Aminotransferase. Length = 309

Iteration: 1
 Score = 51.2 bits (121), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 42/147 (28%), Positives = 65/147 (44%), Gaps = 12/147 (8%)
Query: 76  MYTMKCSNDYFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNA 135
           M T K    +F  G + R+   ++   S  L+YG  +FEG++ Y    G  V+FR  ++ 
Sbjct: 1   MTTKKADYIWF-NGEMVRWEDAKVHVMSHALHYGTSVFEGIRCYDSHKGP-VVFRHREHM 58
Query: 136 IRLQTGAERMCMP-SPSIDQFIDAVKQTALANKRWVPPPGKGSLYIRPLLVGSGPILGLA 194
            RL   A+    P S SID+ ++A +     N          S YIRPL+      +G+ 
Sbjct: 59  QRLHDSAKIYRFPVSQSIDELMEACRDVIRKNNL-------TSAYIRPLIFVGDVGMGVN 111
Query: 195 PAPEYT--FLVFASPVGNYFKVAAFSH 219
           P   Y+   ++ A P G Y    A   
Sbjct: 112 PPAGYSTDVIIAAFPWGAYLGAEALEQ 138

>pdb|1A3G|A Chain A, Branched-chain Amino Acid Aminotransferase From Escherichia Coli Length = 308

Iteration: 1
 Score = 50.4 bits (119), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 40/145 (27%), Positives = 65/145 (44%), Gaps = 11/145 (7%)
Query: 78  TMKCSNDYFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIR 137
           T K ++  +  G + R+   ++   S  L+YG  +FEG++ Y    G  V+FR  ++  R
Sbjct: 1   TTKKADYIWFNGEMVRWEDAKVHVMSHALHYGTSVFEGIRCYDSHKGP-VVFRHREHMQR 59
Query: 138 LQTGAERMCMP-SPSIDQFIDAVKQTALANKRWVPPPGKGSLYIRPLLVGSGPILGLAPA 196
           L   A+    P S SID+ ++A +     N          S YIRPL+      +G+ P 
Sbjct: 60  LHDSAKIYRFPVSQSIDELMEACRDVIRKNNL-------TSAYIRPLIFVGDVGMGVNPP 112
Query: 197 PEYT--FLVFASPVGNYFKVAAFSH 219
             Y+   ++ A P G Y    A   
Sbjct: 113 AGYSTDVIIAAFPWGAYLGAEALEQ 137

>pdb|3U0G|A Chain A, Crystal Structure Of Branched-Chain Amino Acid Aminotransferase From Burkholderia Pseudomallei Length = 328

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/125 (24%), Positives = 59/125 (47%), Gaps = 7/125 (5%)
Query: 89  GRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMP 148
           G+L  +   ++   +  L+YG G+FEG++AY+  DG   +FR  ++  RL   A+   M 
Sbjct: 35  GKLIEWRDAKIHVLTHTLHYGMGVFEGVRAYKTADGGTAIFRLKEHTKRLLNSAKIFQMD 94
Query: 149 SPSIDQFIDAVKQTALANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAPEYTFLVFAS-P 207
            P   + ++A ++  +   +        S Y+RP++      LG++       +  A+ P
Sbjct: 95  VPFDQETLEAAQRDVVRENK------LESCYLRPIIWIGSEKLGVSAKGNTIHVAIAAWP 148
Query: 208 VGNYF 212
            G Y 
Sbjct: 149 WGAYL 153

>pdb|1WRV|A Chain A, Crystal Structure Of T.Th.Hb8 Branched-Chain Amino Acid Aminotransferase Length = 308

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/96 (31%), Positives = 46/96 (47%), Gaps = 9/96 (9%)
Query: 103 SGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSP-SIDQFIDAVKQ 161
           S  L+YG  +FEG++AY    G   +FR  ++  R    A+ + M  P + ++  +A+K+
Sbjct: 26  SHALHYGTSVFEGIRAYETAKGP-AIFRLKEHVKRFYNSAKVLRMEIPFAPEELEEAIKE 84
Query: 162 TALANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAP 197
               N       G  S YIRPL       LG+ P P
Sbjct: 85  VVRRN-------GYRSCYIRPLAWMGAKALGVNPLP 113
  Database: pdbaa

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	227
3dth_A	372	Branched-chain amino acid aminotransferase; open t	3e-81
2a1h_A	365	Branched chain aminotransferase; fold type IV; HET	3e-80
2coi_A	386	Branched chain aminotransferase 1, cytosolic; PLP-	2e-78
2eiy_A	308	ILVE, branched-chain amino acid aminotransferase;	1e-13
1iye_A	309	Branched-chain amino acid aminotransferase; hexame	2e-13
3u0g_A	328	Putative branched-chain amino acid aminotransfera;	2e-13
3lul_A	272	4-amino-4-deoxychorismate lyase; structural genomi	5e-11
3csw_A	285	BCAT, putative branched-chain-amino-acid aminotran	5e-10
2xpf_A	292	4-amino-4-deoxychorismate lyase; para-aminobenzoic	5e-10
3sno_A	315	Hypothetical aminotransferase; D-aminoacid aminotr	3e-09
1i2k_A	269	4-amino-4-deoxychorismate lyase; pyridoxal phospha	4e-09
2zgi_A	246	Putative 4-amino-4-deoxychorismate lyase; TTHA0621	2e-08
3daa_A	277	D-amino acid aminotransferase; pyridoxal phosphate	1e-06
3qqm_A	221	MLR3007 protein; structural genomics, joint center	5e-05

>2a1h_A Branched chain aminotransferase; fold type IV; HET: PLP GBN; 1.80A {Homo sapiens} SCOP: e.17.1.1 PDB: 1ekp_A* 1ekv_A* 1ekf_A* 1kta_A* 1kt8_A* 2hhf_B* 2hhf_A* 2hgw_A* 2hg8_A* 2hgx_A* 2hdk_A* Length = 365

 Score =  243 bits (623), Expect = 3e-80
 Identities = 52/152 (34%), Positives = 85/152 (55%)

Query: 62  DWDNLGFGLTPADYMYTMKCSNDYFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRK 121
             + L FG T  D+M  ++ ++  + + R+  +  + L P+S  L+Y   LFEGMKA++ 
Sbjct: 24  PGEPLVFGKTFTDHMLMVEWNDKGWGQPRIQPFQNLTLHPASSSLHYSLQLFEGMKAFKG 83

Query: 122 EDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGKGSLYIR 181
           +D Q+ LFRP  N  R+   A R+C+PS    + ++ +++    +K WVP     SLY+R
Sbjct: 84  KDQQVRLFRPWLNMDRMLRSAMRLCLPSFDKLELLECIRRLIEVDKDWVPDAAGTSLYVR 143

Query: 182 PLLVGSGPILGLAPAPEYTFLVFASPVGNYFK 213
           P+L+G+ P LG++        V   PVG YF 
Sbjct: 144 PVLIGNEPSLGVSQPRRALLFVILCPVGAYFP 175

>2coi_A Branched chain aminotransferase 1, cytosolic; PLP-dependent enzyme; HET: PLP GBN; 1.90A {Homo sapiens} PDB: 2cog_A* 2coj_A* 2abj_A* Length = 386

 Score =  239 bits (612), Expect = 2e-78
 Identities = 53/153 (34%), Positives = 84/153 (54%), Gaps = 1/153 (0%)

Query: 62  DWDNLGFGLTPADYMYTMKCSNDY-FEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYR 120
           D +NL FG    D+M T++ S+++ +EK  +     + L P S  L+Y   LFEG+KA+R
Sbjct: 43  DPNNLVFGTVFTDHMLTVEWSSEFGWEKPHIKPLQNLSLHPGSSALHYAVELFEGLKAFR 102

Query: 121 KEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGKGSLYI 180
             D ++ LF+P+ N  R+   A R  +P    ++ ++ ++Q    ++ WVP     SLYI
Sbjct: 103 GVDNKIRLFQPNLNMDRMYRSAVRATLPVFDKEELLECIQQLVKLDQEWVPYSTSASLYI 162

Query: 181 RPLLVGSGPILGLAPAPEYTFLVFASPVGNYFK 213
           RP  +G+ P LG+    +    V  SPVG YF 
Sbjct: 163 RPTFIGTEPSLGVKKPTKALLFVLLSPVGPYFS 195

>2eiy_A ILVE, branched-chain amino acid aminotransferase; PLP-dependent enzyme; HET: PLP; 1.35A {Thermus thermophilus} PDB: 1wrv_A* 2ej0_A* 2ej2_A* 2ej3_A* Length = 308

 Score = 67.6 bits (166), Expect = 1e-13
 Identities = 34/111 (30%), Positives = 53/111 (47%), Gaps = 13/111 (11%)

Query: 106 LNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSP-SIDQFIDAVKQTAL 164
           L+YG  +FEG++AY    G  + FR  ++  R    A+ + M  P + ++  +A+K+   
Sbjct: 29  LHYGTSVFEGIRAYETAKGPAI-FRLKEHVKRFYNSAKVLRMEIPFAPEELEEAIKEVVR 87

Query: 165 ANKRWVPPPGKGSLYIRPLL-VGSGPILGLAPAPEY--TFLVFASPVGNYF 212
            N       G  S YIRPL  +G+   LG+ P P      +V A   G Y 
Sbjct: 88  RN-------GYRSCYIRPLAWMGAKA-LGVNPLPNNPAEVMVAAWEWGAYL 130

>1iye_A Branched-chain amino acid aminotransferase; hexamer, PLP; HET: PGU; 1.82A {Escherichia coli} SCOP: e.17.1.1 PDB: 1i1l_A* 1i1m_A* 1iyd_A* 1i1k_A* 1a3g_A* Length = 309

 Score = 66.8 bits (164), Expect = 2e-13
 Identities = 35/111 (31%), Positives = 53/111 (47%), Gaps = 13/111 (11%)

Query: 106 LNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSP-SIDQFIDAVKQTAL 164
           L+YG  +FEG++ Y    G +V FR  ++  RL   A+    P   SID+ ++A +    
Sbjct: 30  LHYGTSVFEGIRCYDSHKGPVV-FRHREHMQRLHDSAKIYRFPVSQSIDELMEACRDVIR 88

Query: 165 ANKRWVPPPGKGSLYIRPLL-VGSGPILGLAPAPEYT--FLVFASPVGNYF 212
            N          S YIRPL+ VG    +G+ P   Y+   ++ A P G Y 
Sbjct: 89  KN-------NLTSAYIRPLIFVGDVG-MGVNPPAGYSTDVIIAAFPWGAYL 131

>3u0g_A Putative branched-chain amino acid aminotransfera; structural genomics, seattle structural genomics center for infectious disease; 1.90A {Burkholderia pseudomallei} Length = 328

 Score = 66.9 bits (164), Expect = 2e-13
 Identities = 33/110 (30%), Positives = 51/110 (46%), Gaps = 11/110 (10%)

Query: 106 LNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSP-SIDQFIDAVKQTAL 164
           L+YG G+FEG++AY+  DG   +FR  ++  RL   A+   M  P   +    A +    
Sbjct: 52  LHYGMGVFEGVRAYKTADGGTAIFRLKEHTKRLLNSAKIFQMDVPFDQETLEAAQRDVVR 111

Query: 165 ANKRWVPPPGKGSLYIRPLL-VGSGPILGLAPAP-EYTFLVFASPVGNYF 212
            NK         S Y+RP++ +GS   LG++         + A P G Y 
Sbjct: 112 ENKL-------ESCYLRPIIWIGSEK-LGVSAKGNTIHVAIAAWPWGAYL 153

>3lul_A 4-amino-4-deoxychorismate lyase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2, pyridoxal phosphate; HET: MSE LLP; 1.78A {Legionella pneumophila} Length = 272

 Score = 59.8 bits (146), Expect = 5e-11
 Identities = 23/113 (20%), Positives = 45/113 (39%), Gaps = 18/113 (15%)

Query: 98  ELSPSSGV---LNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSP-SID 153
           +++PS G+   +  G+GLFE ++       +        +  RL   A ++ +P   S D
Sbjct: 12  DMTPSFGIDDRIFLGEGLFETIRVN---SSK--PSFAYMHWERLGNSARQLGIPFEISFD 66

Query: 154 QFIDAVKQTALANKRWVPPPGKGSLYIRPLL-VGSGPILGLAPAPEYTFLVFA 205
            + + + Q    +             I+ +L  G     GLA   + + L+F 
Sbjct: 67  DWFEHLIQKIQKDNL-------YHGGIKAILSGGPAS-RGLAERGQVSQLIFQ 111

>3csw_A BCAT, putative branched-chain-amino-acid aminotransfera; TM0831, putative branched-chain amino acid aminotransferase; HET: PLP CIT; 2.15A {Thermotoga maritima MSB8} Length = 285

 Score = 57.2 bits (139), Expect = 5e-10
 Identities = 18/94 (19%), Positives = 35/94 (37%), Gaps = 16/94 (17%)

Query: 106 LNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSP-SIDQFIDAVKQTAL 164
            +    ++E ++ Y         F   ++  RL+  A+   +P   S D+F   +K  A 
Sbjct: 36  KSLQGAVYETLRTY---SRA--PFAAYKHYTRLKRSADFFNLPLSLSFDEFTKVLKAGAD 90

Query: 165 ANKRWVPPPGKGSLYIRPLL-VGSGPILGLAPAP 197
             K+         + I+  L   SG +     +P
Sbjct: 91  EFKQ--------EVRIKVYLFPDSGEV-LFVFSP 115

>3sno_A Hypothetical aminotransferase; D-aminoacid aminotransferase-like PLP-dependent enzymes, STR genomics; HET: MSE; 1.60A {Corynebacterium glutamicum} Length = 315

 Score = 54.6 bits (132), Expect = 3e-09
 Identities = 21/104 (20%), Positives = 35/104 (33%), Gaps = 10/104 (9%)

Query: 106 LNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALA 165
           L  G G+FE +      DG        ++  R +  A  + +P P ++ +  A +     
Sbjct: 43  LTRGDGIFETLLIR---DGHA--CNVRRHGERFKASAALLGLPEPILEDWEKATQMGI-- 95

Query: 166 NKRWVPPPGKGSLYIRPLL-VGSGPILGLAPAPEYTFLVFASPV 208
            + W   P  G       L  G     GLA        V +  +
Sbjct: 96  -ESWYSHPNAGEASCTWTLSRGRSS-TGLASGWLTITPVSSDKL 137

>1i2k_A 4-amino-4-deoxychorismate lyase; pyridoxal phosphate, PABC; HET: PLP; 1.79A {Escherichia coli} SCOP: e.17.1.1 PDB: 1et0_A* 1i2l_A* Length = 269

 Score = 54.1 bits (131), Expect = 4e-09
 Identities = 18/111 (16%), Positives = 40/111 (36%), Gaps = 20/111 (18%)

Query: 106 LNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALA 165
             +G G F   +     DG++ L     +  RLQ   +R+ +      Q    +K  A  
Sbjct: 19  TQFGDGCFTTARVI---DGKVSLL--SAHIQRLQDACQRLMISCDFWPQLEQEMKTLAAE 73

Query: 166 NKRWVPPPGKGSLYIRPLLV--GSGPILGLAPAPEY--TFLVFASPVGNYF 212
            +         +  ++ +++  GSG   G +       T ++  +    ++
Sbjct: 74  QQ---------NGVLK-VVISRGSGG-RGYSTLNSGPATRILSVTAYPAHY 113

>2zgi_A Putative 4-amino-4-deoxychorismate lyase; TTHA0621, PLP cofactor, pyridoxal enzyme, structural NPPSFA; HET: PLP PGE; 1.93A {Thermus thermophilus} Length = 246

 Score = 52.1 bits (126), Expect = 2e-08
 Identities = 17/100 (17%), Positives = 37/100 (37%), Gaps = 15/100 (15%)

Query: 99  LSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDA 158
           L+     L +G  +F  ++A     G+      +++  RL+  A  + +  P  + F++ 
Sbjct: 11  LALPEAFLYHGASVFTTLRAE---GGR--PLWLEEHLARLRRHALALGLSYPGDEAFLED 65

Query: 159 VKQTALANKRWVPPPGKGSLYIRPLL-VGSGPILGLAPAP 197
           ++    A  +        +  +R    VG G        P
Sbjct: 66  LEALLRAFPK--------APCLRLRFTVGEGV-RLSEARP 96

>3daa_A D-amino acid aminotransferase; pyridoxal phosphate, transaminase; HET: PDD; 1.90A {Bacillus SP} SCOP: e.17.1.1 PDB: 4daa_A* 3lqs_A* 1daa_A* 2daa_A* 5daa_A* 1g2w_A* 1a0g_A* 2dab_A* Length = 277

 Score = 47.5 bits (114), Expect = 1e-06
 Identities = 22/123 (17%), Positives = 46/123 (37%), Gaps = 25/123 (20%)

Query: 106 LNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSP-SIDQFIDAVKQTAL 164
             +G G++E +K Y   +G+  +F  +++  RL   AE++ +  P + D+F   + +   
Sbjct: 24  YQFGDGVYEVVKVY---NGE--MFTVNEHIDRLYASAEKIRITIPYTKDKFHQLLHELVE 78

Query: 165 ANKRWVPPPGKGSLYIRPLL-VGSGPILGLAPAPEYTFLVFASPVGNYFKVAAFSHETYS 223
            N          + +I   +  G+ P                 PV     +  ++ E   
Sbjct: 79  KN-------ELNTGHIYFQVTRGTSP-RAHQFPENTV-----KPV-----IIGYTKENPR 120

Query: 224 GFE 226
             E
Sbjct: 121 PLE 123

>3qqm_A MLR3007 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, transferase; HET: LLP; 2.30A {Mesorhizobium loti} Length = 221

 Score = 41.9 bits (99), Expect = 5e-05
 Identities = 18/92 (19%), Positives = 24/92 (26%), Gaps = 14/92 (15%)

Query: 106 LNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALA 165
                 L E M+      G   L      A RL   A  +        Q I  V   AL 
Sbjct: 12  DTADFELIETMRWQ---PGTSFLRFDRHLA-RLYGSAAELGFACD--PQRIAEVLSDALD 65

Query: 166 NKRWVPPPGKGSLYIRPLLVGSGPILGLAPAP 197
             R        ++  R L +        +  P
Sbjct: 66  GAR-------TAMRTR-LALARNGDATASAQP 89

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	227
3dth_A	372	Branched-chain amino acid aminotransferase; open t	100.0
3dtg_A	372	Branched-chain amino acid aminotransferase; open t	100.0
3uzo_A	358	Branched-chain-amino-acid aminotransferase; BCAT,	100.0
2coi_A	386	Branched chain aminotransferase 1, cytosolic; PLP-	100.0
4dqn_A	345	Putative branched-chain amino acid aminotransfera;	100.0
2a1h_A	365	Branched chain aminotransferase; fold type IV; HET	100.0
3u0g_A	328	Putative branched-chain amino acid aminotransfera;	99.95
1iye_A	309	Branched-chain amino acid aminotransferase; hexame	99.93
2eiy_A	308	ILVE, branched-chain amino acid aminotransferase;	99.92
3daa_A	277	D-amino acid aminotransferase; pyridoxal phosphate	99.92
3sno_A	315	Hypothetical aminotransferase; D-aminoacid aminotr	99.88
1i2k_A	269	4-amino-4-deoxychorismate lyase; pyridoxal phospha	99.88
2xpf_A	292	4-amino-4-deoxychorismate lyase; para-aminobenzoic	99.87
3lul_A	272	4-amino-4-deoxychorismate lyase; structural genomi	99.87
3csw_A	285	BCAT, putative branched-chain-amino-acid aminotran	99.75
2zgi_A	246	Putative 4-amino-4-deoxychorismate lyase; TTHA0621	99.75
3ceb_A	194	D-aminoacid aminotransferase-like PLP-dependent E;	99.5
3qqm_A	221	MLR3007 protein; structural genomics, joint center	99.45

>3dtg_A Branched-chain amino acid aminotransferase; open twisted alpha/beta; HET: PLP; 1.90A {Mycobacterium smegmatis} PDB: 3dtf_A* 3jz6_A* 3ht5_A*

Probab=100.00  E-value=4.8e-45  Score=336.91  Aligned_cols=181  Identities=36%  Similarity=0.691  Sum_probs=158.3

Q ss_pred             hhhhhccccccCCCCCCCccccCCCCCCCCCCCcccCCceEEEEecc-ceEEcCeEeeCCCcccCcCCcceeecCeEEeE
Q 027144           37 SQAAASLQQDCEPSAYSDDESADHMDWDNLGFGLTPADYMYTMKCSN-DYFEKGRLSRYGKIELSPSSGVLNYGQGLFEG  115 (227)
Q Consensus        37 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~fg~~~td~m~~~~~~~-~~W~nG~ivp~~~~~I~~~d~gL~YGdgvFEg  115 (227)
                      .+.++++.+.+.+++.+.+....+--++|||||++|||||++++|+. ++|.||+++|+++++|||.+++||||||||||
T Consensus         4 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~fg~~~tdhm~~~~~~~~~gW~ng~ivp~~~~~i~p~~~~lhYG~gvFEg   83 (372)
T 3dtg_A            4 HHNSGPLEFTVSANTNPATDAVRESILANPGFGKYYTDHMVSIDYTVDEGWHNAQVIPYGPIQLDPSAIVLHYGQEIFEG   83 (372)
T ss_dssp             ------CCCEECCCSSCCCHHHHHHHHHSCCSSSCCCSEEEEEEEETTTEEEEEEEEESCCEEECTTCTHHHHCCEEECC
T ss_pred             ccCCcceEEEEeCCCCCCCcchhhhHhhccCCCCCccceeEEEEECCCCcEeCCEEEEchhceeCcchhhhhccceeeee
Confidence            34445557777766554443222222789999999999999999974 48999999999999999999999999999999


Q ss_pred             EEEEEcCCCeEEeeChhhHHHHHHHhHhhcCCCCCCHHHHHHHHHHHHHhcCCcCCCCCC-ccEEEEEEEEecCCccccC
Q 027144          116 MKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGK-GSLYIRPLLVGSGPILGLA  194 (227)
Q Consensus       116 lKayr~~dG~i~lFRpd~H~~RL~~Sa~rL~mp~~~~e~l~~~i~~lV~~n~~wvP~~~~-~slYIRP~v~~~~~~lGv~  194 (227)
                      ||+|+++||++.+|||++|++||++||++|+||.++.|++.++++++++.|..|||..++ .++||||+++++++.+|+.
T Consensus        84 iraY~~~dG~i~~Fr~~~h~~Rl~~Sa~~l~iP~~~~e~~~~~~~~l~~~~~~~v~~~~~~~~~YiRp~~~~~~~~lgv~  163 (372)
T 3dtg_A           84 LKAYRWADGSIVSFRPEANAARLQSSARRLAIPELPEEVFIESLRQLIAVDEKWVPPAGGEESLYLRPFVIATEPGLGVR  163 (372)
T ss_dssp             EEEEECTTSCEEEESHHHHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHGGGSCCSSSSCEEEEEEEEEECCCCCSCS
T ss_pred             EEEEECCCCeEEeeCchHHHHHHhhcccccCCCCCCHHHHHHHHHHHHHHhhhhccccCCCCceEEEEEEEeecCccCcC
Confidence            999999999999999999999999999999999999999999999999999999999876 6999999999999999999


Q ss_pred             CCCCcEEEEEEeecCCCcccccC
Q 027144          195 PAPEYTFLVFASPVGNYFKVAAF  217 (227)
Q Consensus       195 ps~~~~f~I~~sP~g~Y~~~g~~  217 (227)
                      |+.++.++|+++|+++|+.+|..
T Consensus       164 p~~~~~~~ii~~p~~~~~~~~~~  186 (372)
T 3dtg_A          164 PSNEYRYLLIASPAGAYFKGGIK  186 (372)
T ss_dssp             CCSEEEEEEEEEEESCSSTTSSS
T ss_pred             CCCCceeeeEecccccccccCcc
Confidence            99999999999999999987754

>3uzo_A Branched-chain-amino-acid aminotransferase; BCAT, amino-acid biosynthesis, branched-CH acid biosynthesis, pyridoxal phosphate, L-GLUT; HET: PLP GLU; 2.00A {Deinococcus radiodurans} PDB: 3uzb_A* 3uyy_A*

Probab=100.00  E-value=2.7e-44  Score=330.82  Aligned_cols=162  Identities=43%  Similarity=0.791  Sum_probs=149.3

Q ss_pred             CccccCCCCCCCCCCCcccCCceEEEEeccceEEcCeEeeCCCcccCcCCcceeecCeEEeEEEEEEcCCCeEEeeChhh
Q 027144           54 DDESADHMDWDNLGFGLTPADYMYTMKCSNDYFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQ  133 (227)
Q Consensus        54 ~~~~~~~~d~~~l~fg~~~td~m~~~~~~~~~W~nG~ivp~~~~~I~~~d~gL~YGdgvFEglKayr~~dG~i~lFRpd~  133 (227)
                      .+++.+++||++|+||++|||||++++|++|.|.||+++|++++.|++.|++||||||||||||+|+++||++++|||++
T Consensus        17 ~~~~~~~~~~~~l~fg~~~td~m~~~~~~~~~w~ng~i~p~~~~~i~~~d~gl~yGdgvFE~ir~y~~~dG~i~lfrl~~   96 (358)
T 3uzo_A           17 QAKKLADIDWSTLGFSYIRTDLRYLAHWKDGEWDAGTLTEDNQIHLAEGSTALHYGQQCFEGLKAYRCADGSINLFRPDQ   96 (358)
T ss_dssp             -------CCGGGCCSCCCCCSCEEEEEEETTEECCCEEESCCEEEEETTCHHHHSCCEEECCEEEEECTTSCEEECCHHH
T ss_pred             ccccccCCCcccCCCCCcccCeeEEEEEeCCcEECCEEeEcccceeChHHcceecCcEEEEEEEEEECCCCcEeecCHHH
Confidence            44456789999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhHhhcCCCCCCHHHHHHHHHHHHHhcCCcCCCCCC-ccEEEEEEEEecCCccccCCCCCcEEEEEEeecCCCc
Q 027144          134 NAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGK-GSLYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNYF  212 (227)
Q Consensus       134 H~~RL~~Sa~rL~mp~~~~e~l~~~i~~lV~~n~~wvP~~~~-~slYIRP~v~~~~~~lGv~ps~~~~f~I~~sP~g~Y~  212 (227)
                      |++||++||++|+||.++.++|.++|+++|+.|+.|||+.+. +++||||+++++++.+|+.|+.++.++|+++|+++||
T Consensus        97 Hl~RL~~Sa~~L~ip~~~~e~l~~~i~~lv~~n~~~vp~~~~~~~~yiR~~v~~~~~~~G~~p~~~~~~~i~~~P~~~~~  176 (358)
T 3uzo_A           97 NAARMRMSCRRLLMPELSDEQFIDACLQVVRANEHFLPPYGTGGSLYLRPFVIGVGDNIGVRTAPEFIFSVFCVPVGPYF  176 (358)
T ss_dssp             HHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHTGGGSCCTTSCCEEEEEEEEEEESSCCSSSCCSEEEEEEEEEEECCSS
T ss_pred             HHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHcCCcCCCCCCCceEEEEEEEEecCCccccCCCCCeEEEEEEecChhhh
Confidence            999999999999999779999999999999999999999755 6899999999999999999988899999999999999


Q ss_pred             ccc
Q 027144          213 KVA  215 (227)
Q Consensus       213 ~~g  215 (227)
                      +.|
T Consensus       177 ~~g  179 (358)
T 3uzo_A          177 KGG  179 (358)
T ss_dssp             CSS
T ss_pred             hcC
Confidence            876

>2coi_A Branched chain aminotransferase 1, cytosolic; PLP-dependent enzyme; HET: PLP GBN; 1.90A {Homo sapiens} PDB: 2cog_A* 2coj_A* 2abj_A*

Probab=100.00  E-value=3.3e-42  Score=319.57  Aligned_cols=160  Identities=33%  Similarity=0.587  Sum_probs=148.3

Q ss_pred             cccCCCCCCCCCCCcccCCceEEEEeccc-eEEcCeEeeCCCcccCcCCcceeecCeEEeEEEEEEcCCCeEEeeChhhH
Q 027144           56 ESADHMDWDNLGFGLTPADYMYTMKCSND-YFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQN  134 (227)
Q Consensus        56 ~~~~~~d~~~l~fg~~~td~m~~~~~~~~-~W~nG~ivp~~~~~I~~~d~gL~YGdgvFEglKayr~~dG~i~lFRpd~H  134 (227)
                      .++.++||++|+||++|||||+.++|+++ +|.||+++|++++.|+|.|++||||||||||||+|+++||+|++|||++|
T Consensus        37 ~~~~~~~~~~~~fg~~~td~m~~~~~~~~~~w~ng~~~p~~~~~i~~~d~~l~yG~gvFEg~k~y~g~dg~i~~frld~H  116 (386)
T 2coi_A           37 ILKEKPDPNNLVFGTVFTDHMLTVEWSSEFGWEKPHIKPLQNLSLHPGSSALHYAVELFEGLKAFRGVDNKIRLFQPNLN  116 (386)
T ss_dssp             SCCCCCCCC-CCTTCCCCSEEEEEEEETTTEECCCEEEECCCEEECTTCHHHHSCCEEECCEEEEECTTSCEEEESHHHH
T ss_pred             CcccCCCccccCCccccccceEEEEeCCCcEEECCEEeecccCccCcccchhhcCceeEEEEEEEeCCCCceeecCHHHH
Confidence            34667899999999999999999999887 79999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhHhhcCCCCCCHHHHHHHHHHHHHhcCCcCCCCCCccEEEEEEEEecCCccccCCCCCcEEEEEEeecCCCccc
Q 027144          135 AIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNYFKV  214 (227)
Q Consensus       135 ~~RL~~Sa~rL~mp~~~~e~l~~~i~~lV~~n~~wvP~~~~~slYIRP~v~~~~~~lGv~ps~~~~f~I~~sP~g~Y~~~  214 (227)
                      ++||++||++|+||.++.++|.++|+++|+.|+.|+|+..+.++||||+++++++.+|+.|+.+++++|+++|+++|++.
T Consensus       117 ~~RL~~Sa~~l~~p~~~~e~~~~~i~~lv~~~~~~vp~~~g~~~yiR~~~~~~~~~~g~~p~~~~~~~i~~~p~~~y~~~  196 (386)
T 2coi_A          117 MDRMYRSAVRATLPVFDKEELLECIQQLVKLDQEWVPYSTSASLYIRPTFIGTEPSLGVKKPTKALLFVLLSPVGPYFSS  196 (386)
T ss_dssp             HHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHTGGGSCSSSSCEEEEEEEEEECCCSCSCSCCSEEEEEEEEEEECCCC--
T ss_pred             HHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhccccCCCCCCccEEEEEEEEecCCccccCCCCCcEEEEEEEECcccccc
Confidence            99999999999999779999999999999999999998656799999999999888999998899999999999999976


Q ss_pred             c
Q 027144          215 A  215 (227)
Q Consensus       215 g  215 (227)
                      |
T Consensus       197 ~  197 (386)
T 2coi_A          197 G  197 (386)
T ss_dssp             -
T ss_pred             c
Confidence            6

>4dqn_A Putative branched-chain amino acid aminotransfera; aminotransferase, transferase; 1.97A {Streptococcus mutans}

Probab=100.00  E-value=8e-42  Score=312.76  Aligned_cols=157  Identities=47%  Similarity=0.862  Sum_probs=148.8

Q ss_pred             CCCCCCCCCCCcccCCceEEEEeccceEEcCeEeeCCCcccCcCCcceeecCeEEeEEEEEEcCCCeEEeeChhhHHHHH
Q 027144           59 DHMDWDNLGFGLTPADYMYTMKCSNDYFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRL  138 (227)
Q Consensus        59 ~~~d~~~l~fg~~~td~m~~~~~~~~~W~nG~ivp~~~~~I~~~d~gL~YGdgvFEglKayr~~dG~i~lFRpd~H~~RL  138 (227)
                      +++||++|+||++|||||++++|++|.|.||+++|.+++.|++.|++||||||||||||+|++.||++++|||++|++||
T Consensus         7 ~~~~~~~l~fg~~~td~m~~~~~~~~~w~nG~~vp~~~~~i~~~d~gl~yGdgvFE~ir~~~g~dg~~~~f~l~~Hl~RL   86 (345)
T 4dqn_A            7 VDLDWKNLGFEYHKLPFRYISYYKDGKWDDGKLTEDATLHISESSPALHYGQEAFEGLKAYRTKDGSVQLFRPNMNAERL   86 (345)
T ss_dssp             CCCCGGGCCSCCCCCSCEEEEEEETTEECCCEEESCCSCCCCTTCHHHHSCCEEECCEEEEECTTSCEEEESHHHHHHHH
T ss_pred             CCCCchhcCCCCcccCceEEEEecCCcEECCEEeEhhhcccCccccccccccEEEEEEEEEeCCCCcccccCHHHHHHHH
Confidence            46899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhHhhcCCCCCCHHHHHHHHHHHHHhcCCcCCCCCC-ccEEEEEEEEecCCccccCCCCCcEEEEEEeecCCCcccc
Q 027144          139 QTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGK-GSLYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNYFKVA  215 (227)
Q Consensus       139 ~~Sa~rL~mp~~~~e~l~~~i~~lV~~n~~wvP~~~~-~slYIRP~v~~~~~~lGv~ps~~~~f~I~~sP~g~Y~~~g  215 (227)
                      ++||++|+||.++.++|.++|+++|+.|+.|||+.+. +++||||+++++.+.+|+.|+.+++++|+++|+++|++.+
T Consensus        87 ~~Sa~~L~i~~~~~~~l~~~i~~lv~~n~~~vp~~~~~~~~yiR~~v~~~~~~~g~~p~~~~~~~i~~~p~~~~~~~~  164 (345)
T 4dqn_A           87 QRTADRLLMPQVPTDKFIDAAKQVVRANEEYVPPYGTGATLYLRPLLIGVGDVIGVHPADEYIFTIFAMPVGNYFKGG  164 (345)
T ss_dssp             HHHHHHTTCCCCCHHHHHHHHHHHHHHTGGGSCCTTSSCEEEEEEEEEEESCCCSSCCCSEEEEEEEEEEECCSCTTS
T ss_pred             HHHHHHhCCCCCCHHHHHHHHHHHHHhccccCCCCCCCCcEEEEEEEEeCCCccCCCCCCCeEEEEEEEECccccccC
Confidence            9999999999779999999999999999999998644 5899999999999999999887899999999999998653

>2a1h_A Branched chain aminotransferase; fold type IV; HET: PLP GBN; 1.80A {Homo sapiens} SCOP: e.17.1.1 PDB: 1ekp_A* 1ekv_A* 1ekf_A* 1kta_A* 1kt8_A* 2hhf_B* 2hhf_A* 2hgw_A* 2hg8_A* 2hgx_A* 2hdk_A*

Probab=100.00  E-value=3.5e-40  Score=303.46  Aligned_cols=160  Identities=33%  Similarity=0.592  Sum_probs=149.5

Q ss_pred             cccCCCCC-CCCCCCcccCCceEEEEeccceEEcCeEeeCCCcccCcCCcceeecCeEEeEEEEEEcCCCeEEeeChhhH
Q 027144           56 ESADHMDW-DNLGFGLTPADYMYTMKCSNDYFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQN  134 (227)
Q Consensus        56 ~~~~~~d~-~~l~fg~~~td~m~~~~~~~~~W~nG~ivp~~~~~I~~~d~gL~YGdgvFEglKayr~~dG~i~lFRpd~H  134 (227)
                      .++.++|| ++|+||++|||||+.++|++.+|.||+++|++++.|++.|++||||||||||||+|+++||++++|||++|
T Consensus        17 ~~~~~~~~~~~l~fg~~~~d~m~~~~~~~~~w~ng~~~p~~~~~i~~~d~~l~yG~gvFEt~r~y~g~dG~i~~f~l~~H   96 (365)
T 2a1h_A           17 KPHKKPGPGEPLVFGKTFTDHMLMVEWNDKGWGQPRIQPFQNLTLHPASSSLHYSLQLFEGMKAFKGKDQQVRLFRPWLN   96 (365)
T ss_dssp             SCCCCCCTTSCCCTTCSCCSEEEEEEEETTEECCCEEEESCCEEECTTBHHHHSCCEEECCEEEEECTTSCEEEESHHHH
T ss_pred             CccCCCccccccCcCCccccceeeeecccCeEECCEEeEcccceeCccchhhhcCceeEeEEEEEecCCCceeecCHHHH
Confidence            33456778 99999999999999999987779999999999999999999999999999999999998999999999999


Q ss_pred             HHHHHHhHhhcCCCCCCHHHHHHHHHHHHHhcCCcCCCCCCccEEEEEEEEecCCccccCCCCCcEEEEEEeecCCCccc
Q 027144          135 AIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNYFKV  214 (227)
Q Consensus       135 ~~RL~~Sa~rL~mp~~~~e~l~~~i~~lV~~n~~wvP~~~~~slYIRP~v~~~~~~lGv~ps~~~~f~I~~sP~g~Y~~~  214 (227)
                      ++||++||++|+||.++.++|.++|.++|+.|+.|+|...+.++||||+++++++.+|+.|+.+++++|+++|+++|+..
T Consensus        97 l~RL~~Sa~~l~~~~~~~~~l~~~i~~lv~~~~~~~p~~~g~~~yiR~~~~~~~~~~g~~p~~~~~~~i~~~p~~~~~~~  176 (365)
T 2a1h_A           97 MDRMLRSAMRLCLPSFDKLELLECIRRLIEVDKDWVPDAAGTSLYVRPVLIGNEPSLGVSQPRRALLFVILCPVGAYFPG  176 (365)
T ss_dssp             HHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHTGGGSCCSTTCEEEEEEEEEECCBCCSCSCCSEEEEEEEEEEECCSSSS
T ss_pred             HHHHHHHHHHhCCCCCCHHHHHHHHHHHHHhccccCCCCCCceEEEEEEEEecCCccCCCCCCCcEEEEEEEECcccccc
Confidence            99999999999999779999999999999999999997655689999999999989999988889999999999999976


Q ss_pred             c
Q 027144          215 A  215 (227)
Q Consensus       215 g  215 (227)
                      |
T Consensus       177 g  177 (365)
T 2a1h_A          177 G  177 (365)
T ss_dssp             S
T ss_pred             c
Confidence            6

>3u0g_A Putative branched-chain amino acid aminotransfera; structural genomics, seattle structural genomics center for infectious disease; 1.90A {Burkholderia pseudomallei}

Probab=99.95  E-value=1.5e-28  Score=223.32  Aligned_cols=126  Identities=26%  Similarity=0.463  Sum_probs=113.3

Q ss_pred             eccc-eEEcCeEeeCCCcccCcCCcceeecCeEEeEEEEEEcCCCeEEeeChhhHHHHHHHhHhhcCCCCC-CHHHHHHH
Q 027144           81 CSND-YFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSP-SIDQFIDA  158 (227)
Q Consensus        81 ~~~~-~W~nG~ivp~~~~~I~~~d~gL~YGdgvFEglKayr~~dG~i~lFRpd~H~~RL~~Sa~rL~mp~~-~~e~l~~~  158 (227)
                      ++++ +|.||+++|.+++.|++.|++||||||||||||+|+++||++++||+++|++||++||++|+||.+ +.++|.++
T Consensus        26 ~~~~~~w~nG~~vp~~~~~i~~~drg~~yGdgvFEtir~~~~~dG~~~~f~l~~Hl~RL~~Sa~~l~i~~p~~~~~l~~~  105 (328)
T 3u0g_A           26 DRDGKIWMDGKLIEWRDAKIHVLTHTLHYGMGVFEGVRAYKTADGGTAIFRLKEHTKRLLNSAKIFQMDVPFDQETLEAA  105 (328)
T ss_dssp             SCCSEEEETTEEEEGGGCEEESSCHHHHHCCEEECCEEEEECTTSCEEEESHHHHHHHHHHHHHHTTCCCSSCHHHHHHH
T ss_pred             cCCCEEEECCEEeehHhCccCccchHHhcCceEEEEEEEEECCCCCeeeCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
Confidence            3445 799999999999999999999999999999999998888988899999999999999999999987 99999999


Q ss_pred             HHHHHHhcCCcCCCCCCccEEEEEEEEecCCccccCCCC-CcEEEEEEeecCCCcc
Q 027144          159 VKQTALANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAP-EYTFLVFASPVGNYFK  213 (227)
Q Consensus       159 i~~lV~~n~~wvP~~~~~slYIRP~v~~~~~~lGv~ps~-~~~f~I~~sP~g~Y~~  213 (227)
                      ++++++.|+.       .++||||+++++.+.+|+.|.. .++++|++.|+++|++
T Consensus       106 i~~lv~~n~~-------~~~~iR~~vtrg~~~~g~~p~~~~~~~~i~~~p~~~~~~  154 (328)
T 3u0g_A          106 QRDVVRENKL-------ESCYLRPIIWIGSEKLGVSAKGNTIHVAIAAWPWGAYLG  154 (328)
T ss_dssp             HHHHHHHTTC-------SSEEEEEEEEECSSCCSTTCCCCCEEEEEEEEECC----
T ss_pred             HHHHHHhcCC-------CCeEEEEEEEecCCCCCcCCCCCCcEEEEEEEEcCCCCC
Confidence            9999999976       6799999999999889998765 6899999999999875

>1iye_A Branched-chain amino acid aminotransferase; hexamer, PLP; HET: PGU; 1.82A {Escherichia coli} SCOP: e.17.1.1 PDB: 1i1l_A* 1i1m_A* 1iyd_A* 1i1k_A* 1a3g_A*

Probab=99.93  E-value=2.9e-25  Score=198.56  Aligned_cols=122  Identities=29%  Similarity=0.540  Sum_probs=111.8

Q ss_pred             eEEcCeEeeCCCcccCcCCcceeecCeEEeEEEEEEcCCCeEEeeChhhHHHHHHHhHhhcCCCCC-CHHHHHHHHHHHH
Q 027144           85 YFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSP-SIDQFIDAVKQTA  163 (227)
Q Consensus        85 ~W~nG~ivp~~~~~I~~~d~gL~YGdgvFEglKayr~~dG~i~lFRpd~H~~RL~~Sa~rL~mp~~-~~e~l~~~i~~lV  163 (227)
                      +|.||+++|.+++.|++.|++||||||||||||+|+++||+ ++|++++|++||++||++|+||.+ +.+++.+++.+++
T Consensus         9 ~~~ng~~~~~~~~~i~~~d~g~~yG~gvFEtir~~~~~~G~-~~~~l~~Hl~RL~~Sa~~l~~~~~~~~~~l~~~i~~~~   87 (309)
T 1iye_A            9 IWFNGEMVRWEDAKVHVMSHALHYGTSVFEGIRCYDSHKGP-VVFRHREHMQRLHDSAKIYRFPVSQSIDELMEACRDVI   87 (309)
T ss_dssp             EEETTEEEEGGGCCCCTTCHHHHHCCEEECCEEEECCTTSS-EEETHHHHHHHHHHHHHHHTCCCCSCHHHHHHHHHHHH
T ss_pred             EEECCEEEEhHHcccCccchHHhccceeEEEEEEEECCCCc-EEcCHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHH
Confidence            79999999999999999999999999999999999887885 579999999999999999999966 9999999999999


Q ss_pred             HhcCCcCCCCCCccEEEEEEEEecCCccccCCCC--CcEEEEEEeecCCCccc
Q 027144          164 LANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAP--EYTFLVFASPVGNYFKV  214 (227)
Q Consensus       164 ~~n~~wvP~~~~~slYIRP~v~~~~~~lGv~ps~--~~~f~I~~sP~g~Y~~~  214 (227)
                      +.|..       +++|||++++++...+|+.|+.  +++++|.+.|+++|+..
T Consensus        88 ~~~~~-------~~~~iR~~v~~g~~~~g~~p~~~~~~~~~i~~~p~~~~~~~  133 (309)
T 1iye_A           88 RKNNL-------TSAYIRPLIFVGDVGMGVNPPAGYSTDVIIAAFPWGAYLGA  133 (309)
T ss_dssp             HHTTC-------SSEEEEEEEEECSSCSSSSCCTTCCEEEEEEEECCCCTTCT
T ss_pred             HhcCC-------CCEEEEEEEEeCCCccCCCCCCCCCcEEEEEEEEcCccCCc
Confidence            99874       6799999999998888988653  78999999999988753

>2eiy_A ILVE, branched-chain amino acid aminotransferase; PLP-dependent enzyme; HET: PLP; 1.35A {Thermus thermophilus} PDB: 1wrv_A* 2ej0_A* 2ej2_A* 2ej3_A*

Probab=99.92  E-value=2.7e-25  Score=198.80  Aligned_cols=122  Identities=28%  Similarity=0.437  Sum_probs=107.2

Q ss_pred             eEEcCeEeeCCCcccCcCCcceeecCeEEeEEEEEEcCCCeEEeeChhhHHHHHHHhHhhcCCCCC-CHHHHHHHHHHHH
Q 027144           85 YFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSP-SIDQFIDAVKQTA  163 (227)
Q Consensus        85 ~W~nG~ivp~~~~~I~~~d~gL~YGdgvFEglKayr~~dG~i~lFRpd~H~~RL~~Sa~rL~mp~~-~~e~l~~~i~~lV  163 (227)
                      .|.||+++|.+++.|++.|++||||||||||||+|.++||. ++|++++|++||++||++|+||.+ +.+++.+++.+++
T Consensus         8 ~~~nG~~~~~~~~~i~~~d~g~~yG~gvFEtir~~~g~~g~-~~~~l~~Hl~RL~~Sa~~l~~~~~~~~~~l~~~i~~~~   86 (308)
T 2eiy_A            8 IWMNGAFVPQEEAKTSVLSHALHYGTSVFEGIRAYETAKGP-AIFRLKEHVKRFYNSAKVLRMEIPFAPEELEEAIKEVV   86 (308)
T ss_dssp             EEETTEEECGGGCCCCTTCHHHHHCCEEECCEEEECCTTSC-EEETHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHH
T ss_pred             EEECCEEeEhHHCccCccchHhhhcceEEEEEEEECCCCcc-cccCHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHH
Confidence            79999999999999999999999999999999999776666 789999999999999999999976 9999999999999


Q ss_pred             HhcCCcCCCCCCccEEEEEEEEecCCccccCCC--CCcEEEEEEeecCCCccc
Q 027144          164 LANKRWVPPPGKGSLYIRPLLVGSGPILGLAPA--PEYTFLVFASPVGNYFKV  214 (227)
Q Consensus       164 ~~n~~wvP~~~~~slYIRP~v~~~~~~lGv~ps--~~~~f~I~~sP~g~Y~~~  214 (227)
                      +.|..       .++|||++++++...+|+.|.  .+++++|.+.|+++|+..
T Consensus        87 ~~~~~-------~~~~iR~~v~~g~~~~~~~p~~~~~~~~~i~~~p~~~~~~~  132 (308)
T 2eiy_A           87 RRNGY-------RSCYIRPLAWMGAKALGVNPLPNNPAEVMVAAWEWGAYLGE  132 (308)
T ss_dssp             HHTTC-------SSEEEEEEEECCSSCCSSCCGGGCSCEEEEEEEEC------
T ss_pred             HhCCC-------CcEEEEEEEEecCCccCcCCCCCCCeEEEEEEEEcCccCCc
Confidence            99874       579999999999888888876  478999999999988753

>3daa_A D-amino acid aminotransferase; pyridoxal phosphate, transaminase; HET: PDD; 1.90A {Bacillus SP} SCOP: e.17.1.1 PDB: 4daa_A* 3lqs_A* 1daa_A* 2daa_A* 5daa_A* 1g2w_A* 1a0g_A* 2dab_A*

Probab=99.92  E-value=7.1e-25  Score=194.36  Aligned_cols=115  Identities=14%  Similarity=0.220  Sum_probs=103.7

Q ss_pred             eEEcCeEeeCCCcccCcCCcceeecCeEEeEEEEEEcCCCeEEeeChhhHHHHHHHhHhhcCCCCC-CHHHHHHHHHHHH
Q 027144           85 YFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSP-SIDQFIDAVKQTA  163 (227)
Q Consensus        85 ~W~nG~ivp~~~~~I~~~d~gL~YGdgvFEglKayr~~dG~i~lFRpd~H~~RL~~Sa~rL~mp~~-~~e~l~~~i~~lV  163 (227)
                      +|.||+++|.+++.|++.|++||||||||||||+|   +|  ++|++++|++||++||++|+||.+ +.++|.++|++++
T Consensus         3 ~~~nG~~~~~~~~~i~~~d~g~~yGdgvFEtir~~---~g--~~f~l~~Hl~RL~~Sa~~l~i~~~~~~~~l~~~i~~li   77 (277)
T 3daa_A            3 TLWNDQIVKDEEVKIDKEDRGYQFGDGVYEVVKVY---NG--EMFTVNEHIDRLYASAEKIRITIPYTKDKFHQLLHELV   77 (277)
T ss_dssp             EEETTEEEEGGGCCBCTTBHHHHTCCEEEEEEEEE---TT--EETTHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHH
T ss_pred             EEECCEEeEhHHCeechhhhHHhcccEEEEEEEEE---CC--EEcCHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHH
Confidence            69999999999999999999999999999999999   89  589999999999999999999966 9999999999999


Q ss_pred             HhcCCcCCCCCCccEEEEEEEEecCCccccCC---CCCcEEEEEEeecCCC
Q 027144          164 LANKRWVPPPGKGSLYIRPLLVGSGPILGLAP---APEYTFLVFASPVGNY  211 (227)
Q Consensus       164 ~~n~~wvP~~~~~slYIRP~v~~~~~~lGv~p---s~~~~f~I~~sP~g~Y  211 (227)
                      +.|+.       .++|||+.++++.+..|..+   ..+++++|++.|++++
T Consensus        78 ~~n~~-------~~~~lri~vtrG~~~r~~~~p~~~~~~~~~i~~~p~~~~  121 (277)
T 3daa_A           78 EKNEL-------NTGHIYFQVTRGTSPRAHQFPENTVKPVIIGYTKENPRP  121 (277)
T ss_dssp             HHHTC-------CSEEEEEEEESCBCSCCSSCCSSCCCCEEEEEEEECCCC
T ss_pred             HhcCC-------CcEEEEEEEEecCCCcCCCCCCCCCCcEEEEEEEECCCC
Confidence            99976       56789999998777666553   3478999999999864

>3sno_A Hypothetical aminotransferase; D-aminoacid aminotransferase-like PLP-dependent enzymes, STR genomics; HET: MSE; 1.60A {Corynebacterium glutamicum}

Probab=99.88  E-value=1.2e-22  Score=183.62  Aligned_cols=115  Identities=17%  Similarity=0.182  Sum_probs=100.2

Q ss_pred             eEEc---CeE--eeCCCcccCcCCcceeecCeEEeEEEEEEcCCCeEEeeChhhHHHHHHHhHhhcCCCCCCHHHHHHHH
Q 027144           85 YFEK---GRL--SRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAV  159 (227)
Q Consensus        85 ~W~n---G~i--vp~~~~~I~~~d~gL~YGdgvFEglKayr~~dG~i~lFRpd~H~~RL~~Sa~rL~mp~~~~e~l~~~i  159 (227)
                      +|.|   |++  +|.+++.|++.|+||+||||||||||+|   +|  ++|++++|++||.+||++|+||.++.+++.+++
T Consensus        17 v~~n~~~G~~~~~~~~~a~i~~~Drg~~yGdgvFEtirv~---~G--~~~~l~~Hl~RL~~Sa~~L~i~~p~~~~l~~~i   91 (315)
T 3sno_A           17 LIVEPYGGSIRQQNPNLPMVFWDDAALTRGDGIFETLLIR---DG--HACNVRRHGERFKASAALLGLPEPILEDWEKAT   91 (315)
T ss_dssp             EEECSTTCCEEEECTTSCCCCTTBTTTTTCCEEEEEEEEE---TT--EETTHHHHHHHHHHHHHHHTCCCCCHHHHHHHH
T ss_pred             EEEECCCCeEEEeeHHHCcccccchHhhcCCEeEEEEEEE---CC--EECCHHHHHHHHHHHHHHhCCCCcCHHHHHHHH
Confidence            6899   999  9999999999999999999999999999   99  579999999999999999999999999999999


Q ss_pred             HHHHHhcCCcCCCCCCccEEEEEEEEecCCccccCCCCCcEEEEEEeecCCCc
Q 027144          160 KQTALANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNYF  212 (227)
Q Consensus       160 ~~lV~~n~~wvP~~~~~slYIRP~v~~~~~~lGv~ps~~~~f~I~~sP~g~Y~  212 (227)
                      +++++.+..   ..+..++|||++++++.+..|     .++++|++.|+++++
T Consensus        92 ~~~v~~~~~---~n~~~~~~iRl~vtrG~~~~g-----~p~~~v~~~p~~~~~  136 (315)
T 3sno_A           92 QMGIESWYS---HPNAGEASCTWTLSRGRSSTG-----LASGWLTITPVSSDK  136 (315)
T ss_dssp             HHHHHHHHT---C--CCCEEEEEEEECCBTTTC-----CCEEEEEEEECCHHH
T ss_pred             HHHHHhhcc---cCCCCCEEEEEEEEeCCCCCC-----CCEEEEEEEECCCcc
Confidence            999998321   111267999999999876554     357889999988764

>1i2k_A 4-amino-4-deoxychorismate lyase; pyridoxal phosphate, PABC; HET: PLP; 1.79A {Escherichia coli} SCOP: e.17.1.1 PDB: 1et0_A* 1i2l_A*

Probab=99.88  E-value=2.4e-22  Score=176.37  Aligned_cols=110  Identities=15%  Similarity=0.209  Sum_probs=99.1

Q ss_pred             eEEcCeEeeCCCcccCcCCcceeecCeEEeEEEEEEcCCCeEEeeChhhHHHHHHHhHhhcCCCCCCHHHHHHHHHHHHH
Q 027144           85 YFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTAL  164 (227)
Q Consensus        85 ~W~nG~ivp~~~~~I~~~d~gL~YGdgvFEglKayr~~dG~i~lFRpd~H~~RL~~Sa~rL~mp~~~~e~l~~~i~~lV~  164 (227)
                      .|.||+.    ++.|++.|+++|||||||||||+|   +|  ++|++++|++||.+||++|+||.++.+++.+++.++++
T Consensus         2 ~~~nG~~----~~~i~~~d~g~~yG~gvfEtir~~---~G--~~~~l~~Hl~RL~~Sa~~l~~~~~~~~~l~~~i~~~~~   72 (269)
T 1i2k_A            2 FLINGHK----QESLAVSDRATQFGDGCFTTARVI---DG--KVSLLSAHIQRLQDACQRLMISCDFWPQLEQEMKTLAA   72 (269)
T ss_dssp             EEETTEE----ESCCCTTCHHHHHCCEEEEEEEEE---TT--EETTHHHHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHH
T ss_pred             EEECCCc----CCccCccccccccceeEEEEEEEE---CC--EEecHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHH
Confidence            5899992    478999999999999999999999   99  58999999999999999999998889999999999998


Q ss_pred             hcCCcCCCCCCccEEEEEEEEecCCccccCCC--CCcEEEEEEeecCCCc
Q 027144          165 ANKRWVPPPGKGSLYIRPLLVGSGPILGLAPA--PEYTFLVFASPVGNYF  212 (227)
Q Consensus       165 ~n~~wvP~~~~~slYIRP~v~~~~~~lGv~ps--~~~~f~I~~sP~g~Y~  212 (227)
                      .+.         ++|||++++++.+++|+.|+  .+++++|.+.|+++|+
T Consensus        73 ~~~---------~~~iR~~v~~g~~~~g~~p~~~~~~~~~i~~~p~~~~~  113 (269)
T 1i2k_A           73 EQQ---------NGVLKVVISRGSGGRGYSTLNSGPATRILSVTAYPAHY  113 (269)
T ss_dssp             HHC---------SEEEEEEEECCSCCSTTCCTTCCCCEEEEEEECCCSHH
T ss_pred             hCC---------CeEEEEEEEcCCCCCCCCCccCCCcEEEEEEEECCCcc
Confidence            652         48999999999888888876  3789999999999865

>3lul_A 4-amino-4-deoxychorismate lyase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2, pyridoxal phosphate; HET: MSE LLP; 1.78A {Legionella pneumophila}

Probab=99.87  E-value=9.2e-22  Score=173.77  Aligned_cols=104  Identities=18%  Similarity=0.155  Sum_probs=91.7

Q ss_pred             eEEcCeEeeCCCcccCcCCcceeecCeEEeEEEEEEcCCCeEEeeChhhHHHHHHHhHhhcCCCCC-CHHHHHHHHHHHH
Q 027144           85 YFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSP-SIDQFIDAVKQTA  163 (227)
Q Consensus        85 ~W~nG~ivp~~~~~I~~~d~gL~YGdgvFEglKayr~~dG~i~lFRpd~H~~RL~~Sa~rL~mp~~-~~e~l~~~i~~lV  163 (227)
                      .|.||    .+++.|++.|+++|||||||||||+|   +|  ++|++++|++||++||++|+||.+ +.+++.+++.+++
T Consensus         6 ~~~nG----~~~a~i~~~d~g~~yG~gvFEtir~~---~g--~~~~l~~Hl~RL~~Sa~~l~i~~p~~~~~l~~~i~~l~   76 (272)
T 3lul_A            6 VIEDK----GDMTPSFGIDDRIFLGEGLFETIRVN---SS--KPSFAYMHWERLGNSARQLGIPFEISFDDWFEHLIQKI   76 (272)
T ss_dssp             ECCCC----C--CCCCCTTBGGGGTCEEEEEEEEE---TT--EESSHHHHHHHHHHHHHHHTCCCCCCHHHHHHHHHHHH
T ss_pred             EEECC----ccccccCCccchhhcceEeEEEEEEE---CC--EeCCHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHH
Confidence            68888    77889999999999999999999999   89  589999999999999999999998 9999999999999


Q ss_pred             HhcCCcCCCCCCccEEEEEEEEecCCccccCCCCC--cEEEEE
Q 027144          164 LANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAPE--YTFLVF  204 (227)
Q Consensus       164 ~~n~~wvP~~~~~slYIRP~v~~~~~~lGv~ps~~--~~f~I~  204 (227)
                      +.|+.       .++|||++++++.+.+|+.++..  ++++|.
T Consensus        77 ~~~~~-------~~~~irl~v~rg~~~~g~~~~~~~~~~~~~~  112 (272)
T 3lul_A           77 QKDNL-------YHGGIKAILSGGPASRGLAERGQVSQLIFQT  112 (272)
T ss_dssp             HHTTC-------SSEEEEEEEECCBCCSSTTCCCSSEEEEEEE
T ss_pred             HhcCC-------CCEEEEEEEEecCCccCcCCCCCCCcEEEEE
Confidence            99876       67999999999988888887653  455554

>3csw_A BCAT, putative branched-chain-amino-acid aminotransfera; TM0831, putative branched-chain amino acid aminotransferase; HET: PLP CIT; 2.15A {Thermotoga maritima MSB8}

Probab=99.75  E-value=8.2e-19  Score=155.81  Aligned_cols=111  Identities=20%  Similarity=0.172  Sum_probs=93.0

Q ss_pred             CceEEEEeccceEEcCeEeeCCCcccCcCCcceeecCeEEeEEEEEEcCCCeEEeeChhhHHHHHHHhHhhcCCCCC-CH
Q 027144           74 DYMYTMKCSNDYFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSP-SI  152 (227)
Q Consensus        74 d~m~~~~~~~~~W~nG~ivp~~~~~I~~~d~gL~YGdgvFEglKayr~~dG~i~lFRpd~H~~RL~~Sa~rL~mp~~-~~  152 (227)
                      -|+.+.-|.   |.+|++++..++.|++.|+++  |||||||||+|   +|  .+|++++|++||++||++|+||.+ +.
T Consensus         9 ~~~~~~~~~---~~~~~~~~~~~~~i~~~d~g~--G~gvFEtir~~---~G--~~~~l~~Hl~RL~~Sa~~l~~~~p~~~   78 (285)
T 3csw_A            9 HHHHVLIWW---RGKFRRADEISLDFSLFEKSL--QGAVYETLRTY---SR--APFAAYKHYTRLKRSADFFNLPLSLSF   78 (285)
T ss_dssp             ---CCEEEE---TTEEEESSEEEEEHHHHHHHT--TCCEEEEEEEE---TT--EETTHHHHHHHHHHHHHTTTCCCSSCH
T ss_pred             ccceEEEEE---ccCceEcccccCEeCCccccc--ceeeEEEEEEE---CC--EECCHHHHHHHHHHHHHHhCCCCCCCH
Confidence            344444554   889999999999999999999  99999999999   99  589999999999999999999966 99


Q ss_pred             HHHHHHHHHHHHhcCCcCCCCCCccEEEEEEEEecCCccccCCCCCcEEEEEEeecCCCc
Q 027144          153 DQFIDAVKQTALANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNYF  212 (227)
Q Consensus       153 e~l~~~i~~lV~~n~~wvP~~~~~slYIRP~v~~~~~~lGv~ps~~~~f~I~~sP~g~Y~  212 (227)
                      +++.+++.++++.|.        +++|||+++..         . .++++|.+.|+++|+
T Consensus        79 ~~l~~~i~~~~~~~~--------~~~~iR~~v~~---------~-~~~~~i~~~p~~~~~  120 (285)
T 3csw_A           79 DEFTKVLKAGADEFK--------QEVRIKVYLFP---------D-SGEVLFVFSPLNIPD  120 (285)
T ss_dssp             HHHHHHHHHHHTTCS--------SCEEEEEEECT---------T-TCCEEEEEEECCCCC
T ss_pred             HHHHHHHHHHHHhhC--------CCeEEEEEEEc---------C-CCEEEEEEEeCCCcc
Confidence            999999999998874        24899999931         1 126788888888775

>2zgi_A Putative 4-amino-4-deoxychorismate lyase; TTHA0621, PLP cofactor, pyridoxal enzyme, structural NPPSFA; HET: PLP PGE; 1.93A {Thermus thermophilus}

Probab=99.75  E-value=1.2e-18  Score=151.26  Aligned_cols=94  Identities=17%  Similarity=0.195  Sum_probs=82.4

Q ss_pred             eEEcCeEeeCCCcccCcCCcceee-cCeEEeEEEEEEcCCCeEEeeChhhHHHHHHHhHhhcCCCCCCHHHHHHHHHHHH
Q 027144           85 YFEKGRLSRYGKIELSPSSGVLNY-GQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTA  163 (227)
Q Consensus        85 ~W~nG~ivp~~~~~I~~~d~gL~Y-GdgvFEglKayr~~dG~i~lFRpd~H~~RL~~Sa~rL~mp~~~~e~l~~~i~~lV  163 (227)
                      .|.||+.+      +++.|++++| |||||||||+|   +|  ++|++++|++||++||++|+||.+..+++.+++.+++
T Consensus         2 ~~~nG~~~------~~~~d~g~~y~G~gvFEtir~~---~G--~~~~l~~Hl~RL~~Sa~~l~~~~p~~~~l~~~i~~~~   70 (246)
T 2zgi_A            2 RLLNGTPL------ALALPEAFLYHGASVFTTLRAE---GG--RPLWLEEHLARLRRHALALGLSYPGDEAFLEDLEALL   70 (246)
T ss_dssp             EEETTEEC------CCSSCHHHHHSCCCEEEEEEEE---TT--EETTHHHHHHHHHHHHHHTTCCCCCHHHHHHHHHHHT
T ss_pred             EEECCccc------CCCccCcccccCeeEEEEEEEE---CC--EeCCHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHH
Confidence            48899954      4999999999 99999999999   89  6899999999999999999999873499999999999


Q ss_pred             Hhc-CCcCCCCCCccEEEEEEEEecCCccccCCC
Q 027144          164 LAN-KRWVPPPGKGSLYIRPLLVGSGPILGLAPA  196 (227)
Q Consensus       164 ~~n-~~wvP~~~~~slYIRP~v~~~~~~lGv~ps  196 (227)
                      +.| +.       +++|||+++++++..+|+.|.
T Consensus        71 ~~~~~~-------~~~~vR~~v~~g~~~~~~~p~   97 (246)
T 2zgi_A           71 RAFPKA-------PCLRLRFTVGEGVRLSEARPY   97 (246)
T ss_dssp             TSCTTC-------SEEEEEEEEETTEEEEEEEEC
T ss_pred             HhcCCC-------CCEEEEEEEECCCCccCcCcC
Confidence            887 33       689999999988877777654

>3ceb_A D-aminoacid aminotransferase-like PLP-dependent E; joint center for structural genomics, protein structure initiative, PSI-2, lyase; HET: LLP; 2.40A {Haemophilus somnus}

Probab=99.50  E-value=1.1e-14  Score=121.91  Aligned_cols=69  Identities=13%  Similarity=0.102  Sum_probs=62.0

Q ss_pred             eecCeEEeEEEEEEcCCCeEEeeChhhHHHHHHHhH-hhcCCC--CC-CHHHHHHHHHHHHHhcCCcCCCCCCccEEEEE
Q 027144          107 NYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGA-ERMCMP--SP-SIDQFIDAVKQTALANKRWVPPPGKGSLYIRP  182 (227)
Q Consensus       107 ~YGdgvFEglKayr~~dG~i~lFRpd~H~~RL~~Sa-~rL~mp--~~-~~e~l~~~i~~lV~~n~~wvP~~~~~slYIRP  182 (227)
                      +||+|||||||+|   +|  .+|++++|++||++|| ++|+||  .+ +.+++.+++. +++.|..       +++|||+
T Consensus         2 ~~g~~vfEt~r~~---~g--~~~~l~~Hl~RL~~Sa~~~l~~~~~~~~~~~~~~~~i~-~~~~~~~-------~~~~iR~   68 (194)
T 3ceb_A            2 MWQFPLFETILIE---QG--QAKNISYHQQRYEKSLLKFYPKMKLQPFDLAKIIAKHT-ALFTHRE-------GLIRCRI   68 (194)
T ss_dssp             CTTCCEEEEEEEE---TT--EECSHHHHHHHHHHHHHHHSTTCCCCCCCHHHHHHTCG-GGGSCSS-------SEEEEEE
T ss_pred             CCCCeEEEEEEEE---CC--EecCHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH-HHhhCCC-------CCEEEEE
Confidence            7999999999999   99  5899999999999999 999999  44 8999999998 8887764       6899999


Q ss_pred             EEEecC
Q 027144          183 LLVGSG  188 (227)
Q Consensus       183 ~v~~~~  188 (227)
                      +++++.
T Consensus        69 ~~~~g~   74 (194)
T 3ceb_A           69 DYNHHD   74 (194)
T ss_dssp             EECSSC
T ss_pred             EEeCCc
Confidence            999874

>3qqm_A MLR3007 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, transferase; HET: LLP; 2.30A {Mesorhizobium loti}

Probab=99.45  E-value=4.7e-13  Score=114.76  Aligned_cols=82  Identities=17%  Similarity=0.169  Sum_probs=67.5

Q ss_pred             eecCeEEeEEEEEEcCCCeEEeeChhhHHHHHHHhHhhcCCCCCCHHHHHHHHHHHHHhcCCcCCCCCCccEEEEEEEEe
Q 027144          107 NYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGKGSLYIRPLLVG  186 (227)
Q Consensus       107 ~YGdgvFEglKayr~~dG~i~lFRpd~H~~RL~~Sa~rL~mp~~~~e~l~~~i~~lV~~n~~wvP~~~~~slYIRP~v~~  186 (227)
                      .-|+|||||||+|  ++|  .+|++++|++||++||++|+||. +.+++.+++.++++ |..       +++|||+++++
T Consensus        13 ~~g~glFEtir~~--~~G--~~~~l~~Hl~RL~~Sa~~l~~~~-~~~~l~~~i~~~~~-~~~-------~~~~iR~~~~~   79 (221)
T 3qqm_A           13 TADFELIETMRWQ--PGT--SFLRFDRHLARLYGSAAELGFAC-DPQRIAEVLSDALD-GAR-------TAMRTRLALAR   79 (221)
T ss_dssp             TSCCEEEEEEEEE--TTT--EETTHHHHHHHHHHHHHHHTCCC-CHHHHHHHHHHHHT-TCC-------SCEEEEEEEET
T ss_pred             CCCCEEEEEEEEe--cCC--cCcCHHHHHHHHHHHHHHcCCCC-CHHHHHHHHHHHHh-cCC-------CCEEEEEEEEc
Confidence            4689999999999  367  57999999999999999999995 88999999999997 433       67999999998


Q ss_pred             cCCccccCCCCCcEEEEEEeecCCCc
Q 027144          187 SGPILGLAPAPEYTFLVFASPVGNYF  212 (227)
Q Consensus       187 ~~~~lGv~ps~~~~f~I~~sP~g~Y~  212 (227)
                      ++           .+.|.+.|+++++
T Consensus        80 ~g-----------~~~i~~~p~~~~~   94 (221)
T 3qqm_A           80 NG-----------DATASAQPYEPLA   94 (221)
T ss_dssp             TS-----------CEEEEEEECCCCC
T ss_pred             CC-----------CEEEEEEcCCCCC
Confidence            64           2456666666554

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	227
d2a1ha1	363	e.17.1.1 (A:3-365) Branched-chain aminoacid aminot	6e-45
d1iyea_	304	e.17.1.1 (A:) Branched-chain aminoacid aminotransf	5e-17
d1daaa_	277	e.17.1.1 (A:) D-aminoacid aminotransferase {Bacill	8e-09
d1i2ka_	269	e.17.1.1 (A:) Aminodeoxychorismate lyase {Escheric	4e-06

>d2a1ha1 e.17.1.1 (A:3-365) Branched-chain aminoacid aminotransferase {Human (Homo sapiens), mitochondrial [TaxId: 9606]} Length = 363

class: Multi-domain proteins (alpha and beta)
fold: D-aminoacid aminotransferase-like PLP-dependent enzymes
superfamily: D-aminoacid aminotransferase-like PLP-dependent enzymes
family: D-aminoacid aminotransferase-like PLP-dependent enzymes
domain: Branched-chain aminoacid aminotransferase
species: Human (Homo sapiens), mitochondrial [TaxId: 9606]

 Score =  151 bits (382), Expect = 6e-45
 Identities = 52/157 (33%), Positives = 86/157 (54%)

Query: 61  MDWDNLGFGLTPADYMYTMKCSNDYFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYR 120
              + L FG T  D+M  ++ ++  + + R+  +  + L P+S  L+Y   LFEGMKA++
Sbjct: 21  GPGEPLVFGKTFTDHMLMVEWNDKGWGQPRIQPFQNLTLHPASSSLHYSLQLFEGMKAFK 80

Query: 121 KEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGKGSLYI 180
            +D Q+ LFRP  N  R+   A R+C+PS    + ++ +++    +K WVP     SLY+
Sbjct: 81  GKDQQVRLFRPWLNMDRMLRSAMRLCLPSFDKLELLECIRRLIEVDKDWVPDAAGTSLYV 140

Query: 181 RPLLVGSGPILGLAPAPEYTFLVFASPVGNYFKVAAF 217
           RP+L+G+ P LG++        V   PVG YF   + 
Sbjct: 141 RPVLIGNEPSLGVSQPRRALLFVILCPVGAYFPGGSV 177

>d1iyea_ e.17.1.1 (A:) Branched-chain aminoacid aminotransferase {Escherichia coli [TaxId: 562]} Length = 304

class: Multi-domain proteins (alpha and beta)
fold: D-aminoacid aminotransferase-like PLP-dependent enzymes
superfamily: D-aminoacid aminotransferase-like PLP-dependent enzymes
family: D-aminoacid aminotransferase-like PLP-dependent enzymes
domain: Branched-chain aminoacid aminotransferase
species: Escherichia coli [TaxId: 562]

 Score = 76.1 bits (186), Expect = 5e-17
 Identities = 33/133 (24%), Positives = 54/133 (40%), Gaps = 9/133 (6%)

Query: 89  GRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMP 148
           G + R+   ++   S  L+YG  +FEG++ Y    G  V+FR  ++  RL   A+    P
Sbjct: 9   GEMVRWEDAKVHVMSHALHYGTSVFEGIRCYDSHKGP-VVFRHREHMQRLHDSAKIYRFP 67

Query: 149 SPSIDQFIDAVKQTALANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAPEYTF--LVFAS 206
                  +        A +  +      S YIRPL+      +G+ P   Y+   ++ A 
Sbjct: 68  VSQSIDELME------ACRDVIRKNNLTSAYIRPLIFVGDVGMGVNPPAGYSTDVIIAAF 121

Query: 207 PVGNYFKVAAFSH 219
           P G Y    A   
Sbjct: 122 PWGAYLGAEALEQ 134

>d1daaa_ e.17.1.1 (A:) D-aminoacid aminotransferase {Bacillus sp., strain YM-1 [TaxId: 1409]} Length = 277

class: Multi-domain proteins (alpha and beta)
fold: D-aminoacid aminotransferase-like PLP-dependent enzymes
superfamily: D-aminoacid aminotransferase-like PLP-dependent enzymes
family: D-aminoacid aminotransferase-like PLP-dependent enzymes
domain: D-aminoacid aminotransferase
species: Bacillus sp., strain YM-1 [TaxId: 1409]

 Score = 52.3 bits (124), Expect = 8e-09
 Identities = 13/82 (15%), Positives = 34/82 (41%), Gaps = 6/82 (7%)

Query: 89  GRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMP 148
            ++ +  ++++        +G G++E +K Y  E     +F  +++  RL   AE++ + 
Sbjct: 7   DQIVKDEEVKIDKEDRGYQFGDGVYEVVKVYNGE-----MFTVNEHIDRLYASAEKIRIT 61

Query: 149 SPSIDQFI-DAVKQTALANKRW 169
            P         + +    N+  
Sbjct: 62  IPYTKDKFHQLLHELVEKNELN 83

>d1i2ka_ e.17.1.1 (A:) Aminodeoxychorismate lyase {Escherichia coli [TaxId: 562]} Length = 269

class: Multi-domain proteins (alpha and beta)
fold: D-aminoacid aminotransferase-like PLP-dependent enzymes
superfamily: D-aminoacid aminotransferase-like PLP-dependent enzymes
family: D-aminoacid aminotransferase-like PLP-dependent enzymes
domain: Aminodeoxychorismate lyase
species: Escherichia coli [TaxId: 562]

 Score = 44.3 bits (103), Expect = 4e-06
 Identities = 17/115 (14%), Positives = 33/115 (28%), Gaps = 12/115 (10%)

Query: 99  LSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDA 158
           L+ S     +G G F   +     DG+  +     +  RLQ   +R+ +      Q    
Sbjct: 12  LAVSDRATQFGDGCFTTARVI---DGK--VSLLSAHIQRLQDACQRLMISCDFWPQLEQ- 65

Query: 159 VKQTALANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNYFK 213
                   K        G L +       G       +   T ++  +    ++ 
Sbjct: 66  ------EMKTLAAEQQNGVLKVVISRGSGGRGYSTLNSGPATRILSVTAYPAHYD 114

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	227
d2a1ha1	363	Branched-chain aminoacid aminotransferase {Human (	100.0
d1iyea_	304	Branched-chain aminoacid aminotransferase {Escheri	99.91
d1daaa_	277	D-aminoacid aminotransferase {Bacillus sp., strain	99.87
d1i2ka_	269	Aminodeoxychorismate lyase {Escherichia coli [TaxI	99.81

>d2a1ha1 e.17.1.1 (A:3-365) Branched-chain aminoacid aminotransferase {Human (Homo sapiens), mitochondrial [TaxId: 9606]}

class: Multi-domain proteins (alpha and beta)
fold: D-aminoacid aminotransferase-like PLP-dependent enzymes
superfamily: D-aminoacid aminotransferase-like PLP-dependent enzymes
family: D-aminoacid aminotransferase-like PLP-dependent enzymes
domain: Branched-chain aminoacid aminotransferase
species: Human (Homo sapiens), mitochondrial [TaxId: 9606]

Probab=100.00  E-value=2.5e-42  Score=314.01  Aligned_cols=157  Identities=33%  Similarity=0.600  Sum_probs=149.5

Q ss_pred             CCCCCCCCCcccCCceEEEEeccceEEcCeEeeCCCcccCcCCcceeecCeEEeEEEEEEcCCCeEEeeChhhHHHHHHH
Q 027144           61 MDWDNLGFGLTPADYMYTMKCSNDYFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQT  140 (227)
Q Consensus        61 ~d~~~l~fg~~~td~m~~~~~~~~~W~nG~ivp~~~~~I~~~d~gL~YGdgvFEglKayr~~dG~i~lFRpd~H~~RL~~  140 (227)
                      .+.++|+||++|||||++++|++|+|.||+++|+++++|||+|++||||||||||||+|+++||++++||||+|++||++
T Consensus        21 ~~~~~~~f~~~~~d~m~~~~~~~~~W~ng~ivp~~~~~isp~~~~l~YG~gvFEgiR~y~~~~g~i~lFrld~Hl~RL~~  100 (363)
T d2a1ha1          21 GPGEPLVFGKTFTDHMLMVEWNDKGWGQPRIQPFQNLTLHPASSSLHYSLQLFEGMKAFKGKDQQVRLFRPWLNMDRMLR  100 (363)
T ss_dssp             CTTSCCCTTCSCCSEEEEEEEETTEECCCEEEESCCEEECTTBHHHHSCCEEECCEEEEECTTSCEEEESHHHHHHHHHH
T ss_pred             CCcccCCCCCcccceEEEEEecCCeeeCCEEeEcccceeCcchhhccccceeeeeEEEEECCCCCEEEEccHHHHHHHHH
Confidence            35799999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hHhhcCCCCCCHHHHHHHHHHHHHhcCCcCCCCCCccEEEEEEEEecCCccccCCCCCcEEEEEEeecCCCcccccC
Q 027144          141 GAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNYFKVAAF  217 (227)
Q Consensus       141 Sa~rL~mp~~~~e~l~~~i~~lV~~n~~wvP~~~~~slYIRP~v~~~~~~lGv~ps~~~~f~I~~sP~g~Y~~~g~~  217 (227)
                      ||++|+||.++.+++.++|.++|+.|+.|+|..++.++||||+++++++.+|+.|+..+.++++++|.+.|++.+..
T Consensus       101 Sa~~l~~~~~~~~~~~~~i~~~v~~n~~~v~~~~~~~~yiR~~v~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~  177 (363)
T d2a1ha1         101 SAMRLCLPSFDKLELLECIRRLIEVDKDWVPDAAGTSLYVRPVLIGNEPSLGVSQPRRALLFVILCPVGAYFPGGSV  177 (363)
T ss_dssp             HHHHTTCCCCCHHHHHHHHHHHHHHTGGGSCCSTTCEEEEEEEEEECCBCCSCSCCSEEEEEEEEEEECCSSSSSSC
T ss_pred             HHHHhCCCCCChHHHHHHHHHHHHHHHhhccccccccEEEEEeeccCCccccccCCcccceeEEEeeccccCccccc
Confidence            99999999889999999999999999999999888899999999999999999998888888899999988876643

>d1iyea_ e.17.1.1 (A:) Branched-chain aminoacid aminotransferase {Escherichia coli [TaxId: 562]}

class: Multi-domain proteins (alpha and beta)
fold: D-aminoacid aminotransferase-like PLP-dependent enzymes
superfamily: D-aminoacid aminotransferase-like PLP-dependent enzymes
family: D-aminoacid aminotransferase-like PLP-dependent enzymes
domain: Branched-chain aminoacid aminotransferase
species: Escherichia coli [TaxId: 562]

Probab=99.91  E-value=2.2e-24  Score=188.61  Aligned_cols=121  Identities=28%  Similarity=0.540  Sum_probs=109.6

Q ss_pred             eEEcCeEeeCCCcccCcCCcceeecCeEEeEEEEEEcCCCeEEeeChhhHHHHHHHhHhhcCCCCC-CHHHHHHHHHHHH
Q 027144           85 YFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSP-SIDQFIDAVKQTA  163 (227)
Q Consensus        85 ~W~nG~ivp~~~~~I~~~d~gL~YGdgvFEglKayr~~dG~i~lFRpd~H~~RL~~Sa~rL~mp~~-~~e~l~~~i~~lV  163 (227)
                      +|.||+++|.+++.|++.|+||+||||||||||+|++.+|++ +|++++|++||.+||++|+|+.+ +.+++.+++++++
T Consensus         5 i~~nG~~~~~~~a~i~~~d~g~~yGdgvFEt~r~~~g~~~~~-lf~l~~Hl~RL~~Sa~~l~i~~~~~~~~~~~~~~~~v   83 (304)
T d1iyea_           5 IWFNGEMVRWEDAKVHVMSHALHYGTSVFEGIRCYDSHKGPV-VFRHREHMQRLHDSAKIYRFPVSQSIDELMEACRDVI   83 (304)
T ss_dssp             EEETTEEEEGGGCCCCTTCHHHHHCCEEECCEEEECCTTSSE-EETHHHHHHHHHHHHHHHTCCCCSCHHHHHHHHHHHH
T ss_pred             EEECCEEeehHHCccCccccHHhhceeeeecEEEEECCCCCe-ecCHHHHHHHHHHhcccccCCCcchhhHHHHHHHHHH
Confidence            899999999999999999999999999999999997766665 89999999999999999999998 8889999999999


Q ss_pred             HhcCCcCCCCCCccEEEEEEEEecCCccccCCCC--CcEEEEEEeecCCCcc
Q 027144          164 LANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAP--EYTFLVFASPVGNYFK  213 (227)
Q Consensus       164 ~~n~~wvP~~~~~slYIRP~v~~~~~~lGv~ps~--~~~f~I~~sP~g~Y~~  213 (227)
                      +.|..       .++|||+.++++....|+.++.  .+.+++.+.|...|..
T Consensus        84 ~~n~~-------~~~~vr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  128 (304)
T d1iyea_          84 RKNNL-------TSAYIRPLIFVGDVGMGVNPPAGYSTDVIIAAFPWGAYLG  128 (304)
T ss_dssp             HHTTC-------SSEEEEEEEEECSSCSSSSCCTTCCEEEEEEEECCCCTTC
T ss_pred             Hhccc-------ccceEEEEeeecccccccCCccccccceeeccccccccCC
Confidence            99976       6799999999999888887765  6778888888877754

>d1daaa_ e.17.1.1 (A:) D-aminoacid aminotransferase {Bacillus sp., strain YM-1 [TaxId: 1409]}

class: Multi-domain proteins (alpha and beta)
fold: D-aminoacid aminotransferase-like PLP-dependent enzymes
superfamily: D-aminoacid aminotransferase-like PLP-dependent enzymes
family: D-aminoacid aminotransferase-like PLP-dependent enzymes
domain: D-aminoacid aminotransferase
species: Bacillus sp., strain YM-1 [TaxId: 1409]

Probab=99.87  E-value=4.7e-22  Score=170.54  Aligned_cols=112  Identities=14%  Similarity=0.218  Sum_probs=96.9

Q ss_pred             eEEcCeEeeCCCcccCcCCcceeecCeEEeEEEEEEcCCCeEEeeChhhHHHHHHHhHhhcCCCCC-CHHHHHHHHHHHH
Q 027144           85 YFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSP-SIDQFIDAVKQTA  163 (227)
Q Consensus        85 ~W~nG~ivp~~~~~I~~~d~gL~YGdgvFEglKayr~~dG~i~lFRpd~H~~RL~~Sa~rL~mp~~-~~e~l~~~i~~lV  163 (227)
                      .|+||+++|.+++.|++.|+||+||||||||||++   +|  ++|++++|++||.+||+.|+|+.+ +.+.+...+.+++
T Consensus         3 ~~~ng~~v~~~~~~i~~~d~g~~~GdgvFEt~r~~---~g--~~~~l~~Hl~RL~~Sa~~l~~~~p~~~~~~~~~~~~~~   77 (277)
T d1daaa_           3 TLWNDQIVKDEEVKIDKEDRGYQFGDGVYEVVKVY---NG--EMFTVNEHIDRLYASAEKIRITIPYTKDKFHQLLHELV   77 (277)
T ss_dssp             EEETTEEEEGGGCCBCTTBHHHHHCCEEEEEEEEE---TT--EESSHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHH
T ss_pred             EEECCEEeEHHHCccCCcchHhhhcceeeeeEEEE---CC--EECChHHHHHHHHHhhhhhhhcccchHHHHHHHHHHHH
Confidence            68999999999999999999999999999999999   99  579999999999999999999988 8999999999999


Q ss_pred             HhcCCcCCCCCCccEEEEEEEEecCCccccCCCC--CcEEEEEEeec
Q 027144          164 LANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAP--EYTFLVFASPV  208 (227)
Q Consensus       164 ~~n~~wvP~~~~~slYIRP~v~~~~~~lGv~ps~--~~~f~I~~sP~  208 (227)
                      ++|..       ..++||+.++++....+..+..  ...+++...+.
T Consensus        78 ~~n~~-------~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  117 (277)
T d1daaa_          78 EKNEL-------NTGHIYFQVTRGTSPRAHQFPENTVKPVIIGYTKE  117 (277)
T ss_dssp             HHHTC-------CSEEEEEEEECCBCSSCSSCCSSCCCCEEEEEEEE
T ss_pred             Hhccc-------ccceEEeeecccCCcccccCccccccceeEEeecc
Confidence            99976       6789999999888776665543  33444444443

>d1i2ka_ e.17.1.1 (A:) Aminodeoxychorismate lyase {Escherichia coli [TaxId: 562]}

class: Multi-domain proteins (alpha and beta)
fold: D-aminoacid aminotransferase-like PLP-dependent enzymes
superfamily: D-aminoacid aminotransferase-like PLP-dependent enzymes
family: D-aminoacid aminotransferase-like PLP-dependent enzymes
domain: Aminodeoxychorismate lyase
species: Escherichia coli [TaxId: 562]

Probab=99.81  E-value=5.1e-20  Score=157.83  Aligned_cols=110  Identities=15%  Similarity=0.213  Sum_probs=93.3

Q ss_pred             eEEcCeEeeCCCcccCcCCcceeecCeEEeEEEEEEcCCCeEEeeChhhHHHHHHHhHhhcCCCCCCHHHHHHHHHHHHH
Q 027144           85 YFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTAL  164 (227)
Q Consensus        85 ~W~nG~ivp~~~~~I~~~d~gL~YGdgvFEglKayr~~dG~i~lFRpd~H~~RL~~Sa~rL~mp~~~~e~l~~~i~~lV~  164 (227)
                      .|.||+    .+..|++.|+||+||||||||||++   +|  ++|++++|++||.+||+.|+|+.+..+++.+.++.++.
T Consensus         2 ~~~NG~----~~a~i~~~drg~~~G~gvFEt~r~~---~g--~i~~l~~Hl~RL~~Sa~~l~i~~~~~~~~~~~i~~~~~   72 (269)
T d1i2ka_           2 FLINGH----KQESLAVSDRATQFGDGCFTTARVI---DG--KVSLLSAHIQRLQDACQRLMISCDFWPQLEQEMKTLAA   72 (269)
T ss_dssp             EEETTE----EESCCCTTCHHHHHCCEEEEEEEEE---TT--EETTHHHHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHH
T ss_pred             EEECCc----ccceeCCCChHHHhhhhheeeEEEE---CC--EECCHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHhh
Confidence            489997    3578999999999999999999999   99  57899999999999999999999878888888888887


Q ss_pred             hcCCcCCCCCCccEEEEEEEEecCCccccCCCC--CcEEEEEEeecCCCc
Q 027144          165 ANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAP--EYTFLVFASPVGNYF  212 (227)
Q Consensus       165 ~n~~wvP~~~~~slYIRP~v~~~~~~lGv~ps~--~~~f~I~~sP~g~Y~  212 (227)
                      .+..         +|||+.++++....+..+..  ...+++.+.+.+.++
T Consensus        73 ~~~~---------~~iri~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  113 (269)
T d1i2ka_          73 EQQN---------GVLKVVISRGSGGRGYSTLNSGPATRILSVTAYPAHY  113 (269)
T ss_dssp             HHCS---------EEEEEEEECCSCCSTTCCTTCCCCEEEEEEECCCSHH
T ss_pred             cccc---------ceEEEeeecCCCccccccccccccceeEEeeccccCc
Confidence            7654         79999999998887776654  467777777766543