Citrus Sinensis ID: 027183

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------
Protein Sequence
MAVGLLAAIVPKPFCLLTTKLQPSSLLTTKPAPLFAPLGTHRGFFNGKNRRKLNSFTVCFVLEEKKQSTQIETFTEEEEEESGTQISTAARVAEKLARKRSERFTYLVAAVMSSFGITSMAVMAVYYRFWWQMEGGEVPLAEMFGTFALSVGAAVGMEFWARWAHKALWHASLWHMHESHHRPREGPFELNDVFAIINAVPAIALLSFGFFHKGLVPGLCFGAVSSQ
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEccccccccccccccHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccHHHHHHHHHHHHHHHHHHHcccccccccHHcccccc
Secondary Structure Prediction (SSPRO)
ccccEEEEccccccHccccccccccccccccccccccccccccccccccccccccEEEEEEEcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHccc
Coil and Loop (DISEMBL)
MAVGLLAAivpkpfcllttklqpssllttkpaplfaplgthrgffngknrrklnSFTVCFVLEEKKQSTQIETFteeeeeesgtqISTAARVAEKLARKRSERFTYLVAAVMSSFGITSMAVMAVYYRFWwqmeggevplaEMFGTFALSVGAAVGMEFWARWAHKALWHASLWHmheshhrpregpfelnDVFAIINAVPAIALLSFgffhkglvpglcfgavssq
Flexible Loop (DISEMBL)
MAVGLLAAIVPKPFCLLTTKLQPSSLLTTKPAPLFAPLGthrgffngknrrKLNSFTVCFVleekkqstqietfteeeeeesgtqistAARVAEKLARKRSERFTYLVAAVMSSFGITSMAVMAVYYRFWWQMEGGEVPLAEMFGTFALSVGAAVGMEFWARWAHKALWHASLWHMHESHHRPREGPFELNDVFAIINAVPAIALLSFGFFHKGLVPGLCFGAVSSQ
Low Complexity Region (SEG)
MAVGLLAAIVPKPFCLLTTKLQPSSLLTTKPAPLFAPLGTHRGFFNGKNRRKLNSFTVCFVLEEKKqstqietfteeeeeesgtqistAARVAEKLARKRSERFTYLVAAVMSSFGITSMAVMAVYYRFWWQMEGGEVPLAEMFGTFALSVGAAVGMEFWARWAHKALWHASLWHMHESHHRPREGPFELNDVFAIINAVPAIALLSFGFFHKGLVPGLCFGAVSSQ
Disordered region (IsUnstruct)
**VGLLAAIVPKPFCLLTTKLQPSSLLTTKPAPLFAPLGTHRGFFNGKNRRKLNSFTVCFVLE**************************************ERFTYLVAAVMSSFGITSMAVMAVYYRFWWQMEGGEVPLAEMFGTFALSVGAAVGMEFWARWAHKALWHASLWHMHESHHRPREGPFELNDVFAIINAVPAIALLSFGFFHKGLVPGLCFGA****
Disordered Region (DISOPRED)
*******AIVPKP****************KPAPLFAPLGT*************NSFTVCFV*********************************************LVAAVMSSFGITSMAVMAVYYRFWWQMEGGEVPLAEMFGTFALSVGAAVGMEFWARWAHKALWHASLWHMHESHHRPREGPFELNDVFAIINAVPAIALLSFGFFHKGLVPGLCFGAVSSQ
Disordered Region (DISEMBL)
MAVGLLAAIVPKPFCLLTTKLQPSSLLTTKPAPLFAPLGTHRGFFNGKNRRKLNSFTVCFVLEEKKQ********************TAARVAEKLARKRSERFTYLVAAVMSSFGITSMAVMAVYYRFWWQMEGGEVPLAEMFGTFALSVGAAVGMEFWARWAHKALWHASLWHMHESHHRPREGPFELNDVFAIINAVPAIALLSFGFFHKGLVPGLCFGAVSSQ
Disordered Region (DISPRO)
**VGLLAAIVPKPFCLLTTKLQPSSLLTTKPAPLFAPLGTHRGFFNGKNRRKLNSFTVCFVLEEK************************ARVAEKL*RKRSERFTYLVAAVMSSFGITSMAVMAVYYRFWWQMEGGEVPLAEMFGTFALSVGAAVGMEFWARWAHKALWHASLWHMHESHHRPREGPFELNDVFAIINAVPAIALLSFGFFHKGLVPGLCFGAVSSQ
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAVGLLAAIVPKPFCLLTTKLQPSSLLTTKPAPLFAPLGTHRGFFNGKNRRKLNSFTVCFVLEEKKQSTQIETFTEEEEEESGTQISTAARVAEKLARKRSERFTYLVAAVMSSFGITSMAVMAVYYRFWWQMEGGEVPLAEMFGTFALSVGAAVGMEFWARWAHKALWHASLWHMHESHHRPREGPFELNDVFAIINAVPAIALLSFGFFHKGLVPGLCFGAVSSQ
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	227	2.2.26 [Sep-21-2011]
O49814	316	Beta-carotene hydroxylase	N/A	no	0.757	0.544	0.832	6e-80
B3SGL0	320	Beta-carotene 3-hydroxyla	N/A	no	0.762	0.540	0.733	2e-74
Q9LTG0	303	Beta-carotene 3-hydroxyla	yes	no	0.779	0.584	0.709	3e-72
Q9SZZ8	310	Beta-carotene 3-hydroxyla	no	no	0.757	0.554	0.72	2e-71
O49815	315	Beta-carotene hydroxylase	N/A	no	0.876	0.631	0.629	1e-70
Q9SPK6	322	Beta-carotene 3-hydroxyla	N/A	no	0.533	0.375	0.5	1e-28
Q01332	176	Beta-carotene hydroxylase	N/A	no	0.251	0.323	0.473	5e-07
P21688	175	Beta-carotene hydroxylase	yes	no	0.242	0.314	0.454	3e-06

>sp|O49814|BCH2_CAPAN Beta-carotene hydroxylase 2, chloroplastic (Fragment) OS=Capsicum annuum GN=CA2 PE=2 SV=1

 Score =  296 bits (759), Expect = 6e-80,   Method: Compositional matrix adjust.
 Identities = 144/173 (83%), Positives = 155/173 (89%), Gaps = 1/173 (0%)

Query: 51  RKLNSFTVCFVLEEKKQSTQIETFTEEEEEESGTQISTAARVAEKLARKRSERFTYLVAA 110
           R+  SFTVCFVLE+ K  TQ E   E+ E +   QIS A R+AEKLARK+SERFTYLVAA
Sbjct: 59  RRRPSFTVCFVLEDDKFKTQFEAGEEDIEMKIEEQIS-ATRLAEKLARKKSERFTYLVAA 117

Query: 111 VMSSFGITSMAVMAVYYRFWWQMEGGEVPLAEMFGTFALSVGAAVGMEFWARWAHKALWH 170
           VMSSFGITSMAVMAVYYRF+WQMEGGEVP +EMFGTFALSVGAAVGMEFWARWAHKALWH
Sbjct: 118 VMSSFGITSMAVMAVYYRFYWQMEGGEVPFSEMFGTFALSVGAAVGMEFWARWAHKALWH 177

Query: 171 ASLWHMHESHHRPREGPFELNDVFAIINAVPAIALLSFGFFHKGLVPGLCFGA 223
           ASLWHMHESHH+PREGPFELNDVFAIINAVPAIALL +GFFHKGL+PGLCFGA
Sbjct: 178 ASLWHMHESHHKPREGPFELNDVFAIINAVPAIALLDYGFFHKGLIPGLCFGA 230

Nonheme diiron monooxygenase involved in the biosynthesis of xanthophylls. Specific for beta-ring hydroxylations of beta-carotene. Produces beta-cryptoxanthin and zeaxanthin. Uses ferredoxin as an electron donor.
Capsicum annuum (taxid: 4072)
EC: 1EC: .EC: 1EC: 4EC: .EC: 1EC: 3EC: .EC: 1EC: 2EC: 9

>sp|B3SGL0|BCH_GENLU Beta-carotene 3-hydroxylase, chloroplastic OS=Gentiana lutea GN=BHY PE=2 SV=1

 Score =  278 bits (712), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 132/180 (73%), Positives = 157/180 (87%), Gaps = 7/180 (3%)

Query: 51  RKLNSFTVCFVLEEKKQSTQIETFTEEEE------EESGTQISTAA-RVAEKLARKRSER 103
           R     TVCFVLEEK+   ++   +++++      ++   +IS +A ++A+KLARK+SER
Sbjct: 56  RSKPRLTVCFVLEEKELRGKLVVASDDDDGAGEVRKQREKEISASAEKLAQKLARKKSER 115

Query: 104 FTYLVAAVMSSFGITSMAVMAVYYRFWWQMEGGEVPLAEMFGTFALSVGAAVGMEFWARW 163
           FTYLVAAVMSSFGITSMAV++VYYRF WQMEGGE+PL+EMFGTFALSVGAAVGMEFWARW
Sbjct: 116 FTYLVAAVMSSFGITSMAVLSVYYRFSWQMEGGEIPLSEMFGTFALSVGAAVGMEFWARW 175

Query: 164 AHKALWHASLWHMHESHHRPREGPFELNDVFAIINAVPAIALLSFGFFHKGLVPGLCFGA 223
           AH+ALWHASLWHMHESHH+PREGPFELND+FAIINAVPAIALLS+GFFHKGL+PGLCFGA
Sbjct: 176 AHEALWHASLWHMHESHHKPREGPFELNDIFAIINAVPAIALLSYGFFHKGLIPGLCFGA 235

Nonheme diiron monooxygenase involved in the biosynthesis of xanthophylls. Specific for beta-ring hydroxylations of beta-carotene. Uses ferredoxin as an electron donor.

Gentiana lutea (taxid: 38851)

EC: 1

EC: .

EC: 1

EC: 4

EC: .

EC: 1

EC: 3

EC: .

EC: 1

EC: 2

EC: 9

>sp|Q9LTG0|BCH2_ARATH Beta-carotene 3-hydroxylase 2, chloroplastic OS=Arabidopsis thaliana GN=BETA-OHASE 2 PE=2 SV=1

 Score =  271 bits (693), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 127/179 (70%), Positives = 150/179 (83%), Gaps = 2/179 (1%)

Query: 45  FNGKNRRKLNSFTVCFVLEEKKQSTQIETFTEEEEEESGTQISTAARVAEKLARKRSERF 104
           FNG  RRK+   TVCFV+EE+KQS+ ++   + E   S ++I   +R+ +K  +K+SERF
Sbjct: 37  FNGFRRRKI--LTVCFVVEERKQSSPMDDDNKPESTTSSSEILMTSRLLKKAEKKKSERF 94

Query: 105 TYLVAAVMSSFGITSMAVMAVYYRFWWQMEGGEVPLAEMFGTFALSVGAAVGMEFWARWA 164
           TYL+AAVMSSFGITSMA+MAVYYRF WQM+GGEV + EMFGTFALSVGAAVGMEFWARWA
Sbjct: 95  TYLIAAVMSSFGITSMAIMAVYYRFSWQMKGGEVSVLEMFGTFALSVGAAVGMEFWARWA 154

Query: 165 HKALWHASLWHMHESHHRPREGPFELNDVFAIINAVPAIALLSFGFFHKGLVPGLCFGA 223
           H+ALWH SLW+MHESHH+PREG FELNDVFAI NAVPAI LL +GF +KGLVPGLCFGA
Sbjct: 155 HRALWHDSLWNMHESHHKPREGAFELNDVFAITNAVPAIGLLYYGFLNKGLVPGLCFGA 213

Nonheme diiron monooxygenase involved in the biosynthesis of xanthophylls. Specific for beta-ring hydroxylations of beta-carotene. Has also a low activity toward the beta- and epsilon-rings of alpha-carotene. No activity with acyclic carotenoids such as lycopene and neurosporene. Uses ferredoxin as an electron donor.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: 4

EC: .

EC: 1

EC: 3

EC: .

EC: 1

EC: 2

EC: 9

>sp|Q9SZZ8|BCH1_ARATH Beta-carotene 3-hydroxylase 1, chloroplastic OS=Arabidopsis thaliana GN=BETA-OHASE 1 PE=1 SV=1

 Score =  268 bits (686), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 126/175 (72%), Positives = 147/175 (84%), Gaps = 3/175 (1%)

Query: 52  KLNSFTVCFVLEEKKQSTQIETFTEEEEEESGTQIST---AARVAEKLARKRSERFTYLV 108
           +   F+VC+V+EE++Q++ IE     E   S   I     A R+AEKL RK+SER TYL+
Sbjct: 41  RFKRFSVCYVVEERRQNSPIENDERPESTSSTNAIDAEYLALRLAEKLERKKSERSTYLI 100

Query: 109 AAVMSSFGITSMAVMAVYYRFWWQMEGGEVPLAEMFGTFALSVGAAVGMEFWARWAHKAL 168
           AA++SSFGITSMAVMAVYYRF WQMEGGE+ + EMFGTFALSVGAAVGMEFWARWAH+AL
Sbjct: 101 AAMLSSFGITSMAVMAVYYRFSWQMEGGEISMLEMFGTFALSVGAAVGMEFWARWAHRAL 160

Query: 169 WHASLWHMHESHHRPREGPFELNDVFAIINAVPAIALLSFGFFHKGLVPGLCFGA 223
           WHASLW+MHESHH+PREGPFELNDVFAI+NA PAI LLS+GFF+KGLVPGLCFGA
Sbjct: 161 WHASLWNMHESHHKPREGPFELNDVFAIVNAGPAIGLLSYGFFNKGLVPGLCFGA 215

Nonheme diiron monooxygenase involved in the biosynthesis of xanthophylls. Specific for beta-ring hydroxylations of beta-carotene. Has also a low activity toward the beta- and epsilon-rings of alpha-carotene. No activity with acyclic carotenoids such as lycopene and neurosporene. Uses ferredoxin as an electron donor.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: 4

EC: .

EC: 1

EC: 3

EC: .

EC: 1

EC: 2

EC: 9

>sp|O49815|BCH1_CAPAN Beta-carotene hydroxylase 1, chloroplastic OS=Capsicum annuum GN=CA1 PE=1 SV=1

 Score =  266 bits (679), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 131/208 (62%), Positives = 155/208 (74%), Gaps = 9/208 (4%)

Query: 23  PSSLLTTKPAPLFAPLGTHRGFFNGKNRRKLNSFTVCFVLEEKK-------QSTQIETFT 75
           P    T  P   F+PL  +      ++RRK      CFVL++ K       + +  E   
Sbjct: 24  PKYFATAPPLLFFSPLTCNLDAIL-RSRRK-PRLAACFVLKDDKLYTAQSGKQSDTEAIG 81

Query: 76  EEEEEESGTQISTAARVAEKLARKRSERFTYLVAAVMSSFGITSMAVMAVYYRFWWQMEG 135
           +E E E+  + S A R+AEK ARK+SERFTYLVAAVMSS GITSMAV++VYYRF WQMEG
Sbjct: 82  DEIEVETNEEKSLAVRLAEKFARKKSERFTYLVAAVMSSLGITSMAVISVYYRFSWQMEG 141

Query: 136 GEVPLAEMFGTFALSVGAAVGMEFWARWAHKALWHASLWHMHESHHRPREGPFELNDVFA 195
           GE+P +EMF TFAL+ GAA+GME+WARWAH+ALWHASLWHMHESHHRPREGPFELND+FA
Sbjct: 142 GEMPFSEMFCTFALAFGAAIGMEYWARWAHRALWHASLWHMHESHHRPREGPFELNDIFA 201

Query: 196 IINAVPAIALLSFGFFHKGLVPGLCFGA 223
           IINAVPAIA  SFGF HKGL+PG+CFGA
Sbjct: 202 IINAVPAIAFFSFGFNHKGLIPGICFGA 229

Nonheme diiron monooxygenase involved in the biosynthesis of xanthophylls. Specific for beta-ring hydroxylations of beta-carotene. Produces beta-cryptoxanthin and zeaxanthin. Uses ferredoxin as an electron donor.

Capsicum annuum (taxid: 4072)

EC: 1

EC: .

EC: 1

EC: 4

EC: .

EC: 1

EC: 3

EC: .

EC: 1

EC: 2

EC: 9

>sp|Q9SPK6|BCH_HAEPL Beta-carotene 3-hydroxylase, chloroplastic (Fragment) OS=Haematococcus pluvialis GN=CRTZ PE=2 SV=1

 Score =  126 bits (317), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 62/124 (50%), Positives = 84/124 (67%), Gaps = 3/124 (2%)

Query: 103 RFTYLVAAVMSSFGITSMAVMAVYYRFWWQME-GGEVPLAEMFGTFALSVGAAVGMEFWA 161
           + +Y  AA+ +S G++ +A+ A Y RF   M  GG VP  E+ GT  L VG A+GME +A
Sbjct: 114 QLSYQAAAIAASIGVSGIAIFATYLRFAMHMTVGGAVPWGEVAGTLLLVVGGALGMEMYA 173

Query: 162 RWAHKALWHASL--WHMHESHHRPREGPFELNDVFAIINAVPAIALLSFGFFHKGLVPGL 219
           R+AHKA+WH S   W +H+SHH PR GPFE ND+FAIIN +PA+ L +FGF+   ++   
Sbjct: 174 RYAHKAIWHESPLGWLLHKSHHTPRTGPFEANDLFAIINGLPAMLLCTFGFWLPNVLGAA 233

Query: 220 CFGA 223
           CFGA
Sbjct: 234 CFGA 237

Nonheme diiron monooxygenase involved in the biosynthesis of astaxanthin. Hydroxylates beta-ring of beta-carotene and catalyzes the conversion of canthaxanthin to astaxanthin. Uses ferredoxin as an electron donor.

Haematococcus pluvialis (taxid: 44745)

EC: 1

EC: .

EC: 1

EC: 4

EC: .

EC: 1

EC: 3

EC: .

EC: 1

EC: 2

EC: 9

>sp|Q01332|CRTZ_ESCVU Beta-carotene hydroxylase OS=Escherichia vulneris GN=crtZ PE=3 SV=1

 Score = 54.7 bits (130), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 27/57 (47%), Positives = 38/57 (66%)

Query: 153 AAVGMEFWARWAHKALWHASLWHMHESHHRPREGPFELNDVFAIINAVPAIALLSFG 209
           + + ME  A + H+ + H   W  HESHH PR+G FELND+FA++ A  AIAL++ G
Sbjct: 11  SVIAMEGIAAFTHRYIMHGWGWRWHESHHTPRKGVFELNDLFAVVFAGVAIALIAVG 67

Catalyzes the hydroxylation reaction from beta-carotene to zeaxanthin.

Escherichia vulneris (taxid: 566)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|P21688|CRTZ_PANAN Beta-carotene hydroxylase OS=Pantoea ananas GN=crtZ PE=3 SV=1

 Score = 52.0 bits (123), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 25/55 (45%), Positives = 35/55 (63%)

Query: 155 VGMEFWARWAHKALWHASLWHMHESHHRPREGPFELNDVFAIINAVPAIALLSFG 209
           +GME  A  AHK + H   W  H SHH PR+G FE+ND++A++ A  +I L+  G
Sbjct: 15  IGMEVIAALAHKYIMHGWGWGWHLSHHEPRKGAFEVNDLYAVVFAALSILLIYLG 69

Catalyzes the hydroxylation reaction from beta-carotene to zeaxanthin.

Pantoea ananas (taxid: 553)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	227
78711803	311	carotenoid beta-ring hydroxylase [Citrus	0.982	0.717	0.995	1e-126
11245486	311	beta-carotene hydroxylase [Citrus unshiu	0.982	0.717	0.991	1e-125
62912179	311	beta carotene hydoxylase [Citrus maxima]	0.982	0.717	0.986	1e-125
9988836	311	beta-carotene hydroxylase [Citrus unshiu	0.982	0.717	0.986	1e-125
116874786	311	beta-carotene hydroxylase [Citrus kinoku	0.982	0.717	0.982	1e-124
49036137	198	beta-carotene hydroxylase [Citrus sinens	0.872	1.0	0.979	1e-109
255545186	303	beta-carotene hydroxylase, putative [Ric	0.947	0.709	0.702	2e-80
325461582	305	beta-carotene hydroxylase [Carica papaya	0.929	0.691	0.688	2e-78
225464577	306	PREDICTED: beta-carotene hydroxylase 2,	0.854	0.633	0.758	2e-78
262036878	310	beta-carotene hydroxylase [Ipomoea nil]	0.973	0.712	0.697	2e-78

>gi|78711803|gb|ABB49053.1| carotenoid beta-ring hydroxylase [Citrus sinensis]

 Score =  457 bits (1175), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 222/223 (99%), Positives = 223/223 (100%)

Query: 1   MAVGLLAAIVPKPFCLLTTKLQPSSLLTTKPAPLFAPLGTHRGFFNGKNRRKLNSFTVCF 60
           MAVGLLAAIVPKPFCLLTTKLQPSSLLTTKPAPLFAPLGTHRGFFNGKNRRKLNSFTVCF
Sbjct: 1   MAVGLLAAIVPKPFCLLTTKLQPSSLLTTKPAPLFAPLGTHRGFFNGKNRRKLNSFTVCF 60

Query: 61  VLEEKKQSTQIETFTEEEEEESGTQISTAARVAEKLARKRSERFTYLVAAVMSSFGITSM 120
           VLEEKKQSTQIETFT+EEEEESGTQISTAARVAEKLARKRSERFTYLVAAVMSSFGITSM
Sbjct: 61  VLEEKKQSTQIETFTDEEEEESGTQISTAARVAEKLARKRSERFTYLVAAVMSSFGITSM 120

Query: 121 AVMAVYYRFWWQMEGGEVPLAEMFGTFALSVGAAVGMEFWARWAHKALWHASLWHMHESH 180
           AVMAVYYRFWWQMEGGEVPLAEMFGTFALSVGAAVGMEFWARWAHKALWHASLWHMHESH
Sbjct: 121 AVMAVYYRFWWQMEGGEVPLAEMFGTFALSVGAAVGMEFWARWAHKALWHASLWHMHESH 180

Query: 181 HRPREGPFELNDVFAIINAVPAIALLSFGFFHKGLVPGLCFGA 223
           HRPREGPFELNDVFAIINAVPAIALLSFGFFHKGLVPGLCFGA
Sbjct: 181 HRPREGPFELNDVFAIINAVPAIALLSFGFFHKGLVPGLCFGA 223

Source: Citrus sinensis

Species: Citrus sinensis

Genus: Citrus

Family: Rutaceae

Order: Sapindales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|11245486|gb|AAG33636.1|AF315289_1 beta-carotene hydroxylase [Citrus unshiu]

 Score =  454 bits (1169), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 221/223 (99%), Positives = 222/223 (99%)

Query: 1   MAVGLLAAIVPKPFCLLTTKLQPSSLLTTKPAPLFAPLGTHRGFFNGKNRRKLNSFTVCF 60
           MAVGLLAAIVPKPFCLLTTKLQPSSLLTTKPAPLFAPLGTH GFFNGKNRRKLNSFTVCF
Sbjct: 1   MAVGLLAAIVPKPFCLLTTKLQPSSLLTTKPAPLFAPLGTHHGFFNGKNRRKLNSFTVCF 60

Query: 61  VLEEKKQSTQIETFTEEEEEESGTQISTAARVAEKLARKRSERFTYLVAAVMSSFGITSM 120
           VLEEKKQSTQIETFT+EEEEESGTQISTAARVAEKLARKRSERFTYLVAAVMSSFGITSM
Sbjct: 61  VLEEKKQSTQIETFTDEEEEESGTQISTAARVAEKLARKRSERFTYLVAAVMSSFGITSM 120

Query: 121 AVMAVYYRFWWQMEGGEVPLAEMFGTFALSVGAAVGMEFWARWAHKALWHASLWHMHESH 180
           AVMAVYYRFWWQMEGGEVPLAEMFGTFALSVGAAVGMEFWARWAHKALWHASLWHMHESH
Sbjct: 121 AVMAVYYRFWWQMEGGEVPLAEMFGTFALSVGAAVGMEFWARWAHKALWHASLWHMHESH 180

Query: 181 HRPREGPFELNDVFAIINAVPAIALLSFGFFHKGLVPGLCFGA 223
           HRPREGPFELNDVFAIINAVPAIALLSFGFFHKGLVPGLCFGA
Sbjct: 181 HRPREGPFELNDVFAIINAVPAIALLSFGFFHKGLVPGLCFGA 223

Source: Citrus unshiu

Species: Citrus unshiu

Genus: Citrus

Family: Rutaceae

Order: Sapindales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|62912179|gb|AAY21681.1| beta carotene hydoxylase [Citrus maxima]

 Score =  452 bits (1163), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 220/223 (98%), Positives = 221/223 (99%)

Query: 1   MAVGLLAAIVPKPFCLLTTKLQPSSLLTTKPAPLFAPLGTHRGFFNGKNRRKLNSFTVCF 60
           MAVGLLAAIVPKPFCLLTTKLQPSSLLTTKPAPL+APLGTH GFFNGKNRRKLNSFTVCF
Sbjct: 1   MAVGLLAAIVPKPFCLLTTKLQPSSLLTTKPAPLYAPLGTHHGFFNGKNRRKLNSFTVCF 60

Query: 61  VLEEKKQSTQIETFTEEEEEESGTQISTAARVAEKLARKRSERFTYLVAAVMSSFGITSM 120
           VLEEKKQSTQIETFTEEEEEESGTQISTAARVAEKLARKRSERFTYLVAAVMSSFGITSM
Sbjct: 61  VLEEKKQSTQIETFTEEEEEESGTQISTAARVAEKLARKRSERFTYLVAAVMSSFGITSM 120

Query: 121 AVMAVYYRFWWQMEGGEVPLAEMFGTFALSVGAAVGMEFWARWAHKALWHASLWHMHESH 180
           AVMAVYYRFWWQMEGGEVPLAEMFGTFALSVGAAVGMEFWARWAHKALWHASLWHMHESH
Sbjct: 121 AVMAVYYRFWWQMEGGEVPLAEMFGTFALSVGAAVGMEFWARWAHKALWHASLWHMHESH 180

Query: 181 HRPREGPFELNDVFAIINAVPAIALLSFGFFHKGLVPGLCFGA 223
           HRPREGPFELNDVFAIINAVPAIALLS GFFHKGLVPGLCFGA
Sbjct: 181 HRPREGPFELNDVFAIINAVPAIALLSVGFFHKGLVPGLCFGA 223

Source: Citrus maxima

Species: Citrus maxima

Genus: Citrus

Family: Rutaceae

Order: Sapindales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|9988836|gb|AAG10793.1|AF296158_1 beta-carotene hydroxylase [Citrus unshiu]

 Score =  451 bits (1161), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 220/223 (98%), Positives = 221/223 (99%)

Query: 1   MAVGLLAAIVPKPFCLLTTKLQPSSLLTTKPAPLFAPLGTHRGFFNGKNRRKLNSFTVCF 60
           MAVGLLAAIVPKPFCLLTTKLQPSSLLTTKPAPLFAPLGT  GFFNGKNRRK+NSFTVCF
Sbjct: 1   MAVGLLAAIVPKPFCLLTTKLQPSSLLTTKPAPLFAPLGTRHGFFNGKNRRKINSFTVCF 60

Query: 61  VLEEKKQSTQIETFTEEEEEESGTQISTAARVAEKLARKRSERFTYLVAAVMSSFGITSM 120
           VLEEKKQSTQIETFTEEEEEESGTQISTAARVAEKLARKRSERFTYLVAAVMSSFGITSM
Sbjct: 61  VLEEKKQSTQIETFTEEEEEESGTQISTAARVAEKLARKRSERFTYLVAAVMSSFGITSM 120

Query: 121 AVMAVYYRFWWQMEGGEVPLAEMFGTFALSVGAAVGMEFWARWAHKALWHASLWHMHESH 180
           AVMAVYYRFWWQMEGGEVPLAEMFGTFALSVGAAVGMEFWARWAHKALWHASLWHMHESH
Sbjct: 121 AVMAVYYRFWWQMEGGEVPLAEMFGTFALSVGAAVGMEFWARWAHKALWHASLWHMHESH 180

Query: 181 HRPREGPFELNDVFAIINAVPAIALLSFGFFHKGLVPGLCFGA 223
           HRPREGPFELNDVFAIINAVPAIALLSFGFFHKGLVPGLCFGA
Sbjct: 181 HRPREGPFELNDVFAIINAVPAIALLSFGFFHKGLVPGLCFGA 223

Source: Citrus unshiu

Species: Citrus unshiu

Genus: Citrus

Family: Rutaceae

Order: Sapindales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|116874786|emb|CAL63739.1| beta-carotene hydroxylase [Citrus kinokuni]

 Score =  451 bits (1159), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 219/223 (98%), Positives = 221/223 (99%)

Query: 1   MAVGLLAAIVPKPFCLLTTKLQPSSLLTTKPAPLFAPLGTHRGFFNGKNRRKLNSFTVCF 60
           MAVGLLAA+VPKPFCLLTTKLQPSSLLTTKPAPLFAPLGT  GFFNGKNRRK+NSFTVCF
Sbjct: 1   MAVGLLAAVVPKPFCLLTTKLQPSSLLTTKPAPLFAPLGTRHGFFNGKNRRKINSFTVCF 60

Query: 61  VLEEKKQSTQIETFTEEEEEESGTQISTAARVAEKLARKRSERFTYLVAAVMSSFGITSM 120
           VLEEKKQSTQIETFTEEEEEESGTQISTAARVAEKLARKRSERFTYLVAAVMSSFGITSM
Sbjct: 61  VLEEKKQSTQIETFTEEEEEESGTQISTAARVAEKLARKRSERFTYLVAAVMSSFGITSM 120

Query: 121 AVMAVYYRFWWQMEGGEVPLAEMFGTFALSVGAAVGMEFWARWAHKALWHASLWHMHESH 180
           AVMAVYYRFWWQMEGGEVPLAEMFGTFALSVGAAVGMEFWARWAHKALWHASLWHMHESH
Sbjct: 121 AVMAVYYRFWWQMEGGEVPLAEMFGTFALSVGAAVGMEFWARWAHKALWHASLWHMHESH 180

Query: 181 HRPREGPFELNDVFAIINAVPAIALLSFGFFHKGLVPGLCFGA 223
           HRPREGPFELNDVFAIINAVPAIALLSFGFFHKGLVPGLCFGA
Sbjct: 181 HRPREGPFELNDVFAIINAVPAIALLSFGFFHKGLVPGLCFGA 223

Source: Citrus kinokuni

Species: Citrus kinokuni

Genus: Citrus

Family: Rutaceae

Order: Sapindales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|49036137|gb|AAT48741.1| beta-carotene hydroxylase [Citrus sinensis]

 Score =  401 bits (1030), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 194/198 (97%), Positives = 195/198 (98%)

Query: 26  LLTTKPAPLFAPLGTHRGFFNGKNRRKLNSFTVCFVLEEKKQSTQIETFTEEEEEESGTQ 85
           LLTTKPAPLFAPLGTHRGFFNGKNRRKLNSFTVCFVLEEKKQSTQIETFT+EEE ESGTQ
Sbjct: 1   LLTTKPAPLFAPLGTHRGFFNGKNRRKLNSFTVCFVLEEKKQSTQIETFTDEEEGESGTQ 60

Query: 86  ISTAARVAEKLARKRSERFTYLVAAVMSSFGITSMAVMAVYYRFWWQMEGGEVPLAEMFG 145
           ISTAARVAEKLARKRSERFTYLVAAVMSSFGITSMAVMAVYYRFWWQMEGGEVPLAEMFG
Sbjct: 61  ISTAARVAEKLARKRSERFTYLVAAVMSSFGITSMAVMAVYYRFWWQMEGGEVPLAEMFG 120

Query: 146 TFALSVGAAVGMEFWARWAHKALWHASLWHMHESHHRPREGPFELNDVFAIINAVPAIAL 205
           TF LS GAAVGMEFWARWAHKALWHASLWHMHESHHRPREGPFELNDVFAIINAVPAIAL
Sbjct: 121 TFVLSAGAAVGMEFWARWAHKALWHASLWHMHESHHRPREGPFELNDVFAIINAVPAIAL 180

Query: 206 LSFGFFHKGLVPGLCFGA 223
           LSFGFFHKGLVPGLCFGA
Sbjct: 181 LSFGFFHKGLVPGLCFGA 198

Source: Citrus sinensis

Species: Citrus sinensis

Genus: Citrus

Family: Rutaceae

Order: Sapindales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255545186|ref|XP_002513654.1| beta-carotene hydroxylase, putative [Ricinus communis] gi|223547562|gb|EEF49057.1| beta-carotene hydroxylase, putative [Ricinus communis]

 Score =  304 bits (779), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 158/225 (70%), Positives = 173/225 (76%), Gaps = 10/225 (4%)

Query: 1   MAVGLLAAIVPKPFCLLTTKLQPSSLLTTKPAP--LFAPLGTHRGFFNGKNRRKLNSFTV 58
           MA GL AA V KPF  +      +S +  KP P  L  P   +   F G  R+    F +
Sbjct: 1   MAAGLSAAPVFKPFRYIN-----ASYILPKPLPTSLVPPSTRYNSLFLGGRRK--TGFAI 53

Query: 59  CFVLEEKKQSTQIETFTEEEEEESGTQISTAARVAEKLARKRSERFTYLVAAVMSSFGIT 118
           CFVLE+ KQS + E   EEE E+   QI T  RVAE+LARKRSERFTYLVAAVMSSFGIT
Sbjct: 54  CFVLEDLKQSVETENPVEEENEKVNYQILTP-RVAERLARKRSERFTYLVAAVMSSFGIT 112

Query: 119 SMAVMAVYYRFWWQMEGGEVPLAEMFGTFALSVGAAVGMEFWARWAHKALWHASLWHMHE 178
           SMAVMA YYRF+WQMEGGEVPLAEMFGTF+LSVGAAVGMEFWARWAH+ALWHASLWHMHE
Sbjct: 113 SMAVMACYYRFYWQMEGGEVPLAEMFGTFSLSVGAAVGMEFWARWAHRALWHASLWHMHE 172

Query: 179 SHHRPREGPFELNDVFAIINAVPAIALLSFGFFHKGLVPGLCFGA 223
           SHHRPREGPFELNDVFAI NAVPAI LL +GFF+KGL PGLCFGA
Sbjct: 173 SHHRPREGPFELNDVFAITNAVPAIGLLYYGFFNKGLFPGLCFGA 217

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|325461582|gb|ADZ14893.1| beta-carotene hydroxylase [Carica papaya]

 Score =  298 bits (762), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 159/231 (68%), Positives = 175/231 (75%), Gaps = 20/231 (8%)

Query: 1   MAVGLLAAIVPKPFCLLTTKLQPSSLLTTKPAP-----LFAPL--GTHRGFFNGKNRRKL 53
           MA GL AAI  K            S  + +P P     L +PL  G +RG F    R   
Sbjct: 1   MAAGLSAAITLKSL---------GSFHSAQPYPPPKPTLISPLSRGLNRGIFRPHKR--- 48

Query: 54  NSFTVCFVLEEKKQSTQIETFTEE-EEEESGTQISTAARVAEKLARKRSERFTYLVAAVM 112
            +F VCFVLEE+KQ  QIE   EE   ++   +   A+++AEKLARKRSERFTYLVAAVM
Sbjct: 49  TTFAVCFVLEEQKQIAQIENQAEELSSKDVELEQILASKMAEKLARKRSERFTYLVAAVM 108

Query: 113 SSFGITSMAVMAVYYRFWWQMEGGEVPLAEMFGTFALSVGAAVGMEFWARWAHKALWHAS 172
           SSFGITSMAVMAVYYRF WQMEGGEVP +EMFGTFALSVGAAVGMEFWARWAH+ALWHAS
Sbjct: 109 SSFGITSMAVMAVYYRFAWQMEGGEVPFSEMFGTFALSVGAAVGMEFWARWAHRALWHAS 168

Query: 173 LWHMHESHHRPREGPFELNDVFAIINAVPAIALLSFGFFHKGLVPGLCFGA 223
           LWHMHESHHRPREGPFELNDVFAI NAVPAIALLS+GFF+KGLVPGLCFGA
Sbjct: 169 LWHMHESHHRPREGPFELNDVFAITNAVPAIALLSYGFFNKGLVPGLCFGA 219

Source: Carica papaya

Species: Carica papaya

Genus: Carica

Family: Caricaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225464577|ref|XP_002273581.1| PREDICTED: beta-carotene hydroxylase 2, chloroplastic isoform 1 [Vitis vinifera]

 Score =  298 bits (762), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 154/203 (75%), Positives = 168/203 (82%), Gaps = 9/203 (4%)

Query: 22  QPSSLLTTKPAPLFAP-LGTHRGFFNGKNRRKLNSFTVCFVLEEKKQSTQIETFTEEEEE 80
           +P+S  T  P  LF P +  H   F  + + +L   TVCFV+EE+K ST++       EE
Sbjct: 25  KPTSPFT--PTSLFIPSIRRHENIFRCRKKTRL---TVCFVVEEEKLSTEV--VENRSEE 77

Query: 81  ESGTQISTAARVAEKLARKRSERFTYLVAAVMSSFGITSMAVMAVYYRFWWQMEGGEVPL 140
              +QIS AARVAEKLARKRSER TYLVAAVMSSFGITSMAVMAVYYRF WQMEGGEVPL
Sbjct: 78  TLASQIS-AARVAEKLARKRSERLTYLVAAVMSSFGITSMAVMAVYYRFSWQMEGGEVPL 136

Query: 141 AEMFGTFALSVGAAVGMEFWARWAHKALWHASLWHMHESHHRPREGPFELNDVFAIINAV 200
           +EMFGTFALSVGAAVGMEFWARWAHKALWHASLWHMHESHH+PREGPFELNDVFAI NAV
Sbjct: 137 SEMFGTFALSVGAAVGMEFWARWAHKALWHASLWHMHESHHKPREGPFELNDVFAITNAV 196

Query: 201 PAIALLSFGFFHKGLVPGLCFGA 223
           PAIALLS+GFFHKGLVPGLCFGA
Sbjct: 197 PAIALLSYGFFHKGLVPGLCFGA 219

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|262036878|dbj|BAI47580.1| beta-carotene hydroxylase [Ipomoea nil]

 Score =  297 bits (760), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 157/225 (69%), Positives = 179/225 (79%), Gaps = 4/225 (1%)

Query: 1   MAVGL-LAAIVPKPFCLLTTKLQPSSLLTTKPAPLFAPLGTHRGFFNGKNRRKLNSFTVC 59
           MAVG+ +AA     +    + ++P++   + P+ LF+PL         ++RRK  S TVC
Sbjct: 1   MAVGISIAASSRTVYSCQFSLVRPATHSASPPSLLFSPLSRRFRSSVLRSRRK-PSLTVC 59

Query: 60  FVLEEKK-QSTQIETFTEEEEEESGTQISTAARVAEKLARKRSERFTYLVAAVMSSFGIT 118
           FVLE++K +S  +E   EE E     QIS A+R+AEKLARKRSERFTYLVAAVMSS GIT
Sbjct: 60  FVLEDEKLESGGVEIRAEEIERAIEKQIS-ASRLAEKLARKRSERFTYLVAAVMSSLGIT 118

Query: 119 SMAVMAVYYRFWWQMEGGEVPLAEMFGTFALSVGAAVGMEFWARWAHKALWHASLWHMHE 178
           SMAV+AVYYRF WQMEGGEVP  EMFGTFALSVGAAVGMEFWARWAH+ALWHASLWHMHE
Sbjct: 119 SMAVLAVYYRFAWQMEGGEVPYTEMFGTFALSVGAAVGMEFWARWAHRALWHASLWHMHE 178

Query: 179 SHHRPREGPFELNDVFAIINAVPAIALLSFGFFHKGLVPGLCFGA 223
           SHHRPREGPFELNDVFAI NAVPAIALLS+GFFHKGLVPGLCFGA
Sbjct: 179 SHHRPREGPFELNDVFAITNAVPAIALLSYGFFHKGLVPGLCFGA 223

Source: Ipomoea nil

Species: Ipomoea nil

Genus: Ipomoea

Family: Convolvulaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	227
TAIR|locus:2149599	303	BETA-OHASE 2 "beta-carotene hy	0.779	0.584	0.681	3.3e-63
TAIR|locus:2131381	310	BETA-OHASE 1 "beta-hydroxylase	0.757	0.554	0.685	6.9e-63

TAIR|locus:2149599 BETA-OHASE 2 "beta-carotene hydroxylase 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 645 (232.1 bits), Expect = 3.3e-63, P = 3.3e-63
 Identities = 122/179 (68%), Positives = 139/179 (77%)

Query:    45 FNGKNRRKLNSFTVCFVLEEKKXXXXXXXXXXXXXXXXXXXXXXAARVAEKLARKRSERF 104
             FNG  RRK+   TVCFV+EE+K                       +R+ +K  +K+SERF
Sbjct:    37 FNGFRRRKI--LTVCFVVEERKQSSPMDDDNKPESTTSSSEILMTSRLLKKAEKKKSERF 94

Query:   105 TYLVAAVMSSFGITSMAVMAVYYRFWWQMEGGEVPLAEMFGTFALSVGAAVGMEFWARWA 164
             TYL+AAVMSSFGITSMA+MAVYYRF WQM+GGEV + EMFGTFALSVGAAVGMEFWARWA
Sbjct:    95 TYLIAAVMSSFGITSMAIMAVYYRFSWQMKGGEVSVLEMFGTFALSVGAAVGMEFWARWA 154

Query:   165 HKALWHASLWHMHESHHRPREGPFELNDVFAIINAVPAIALLSFGFFHKGLVPGLCFGA 223
             H+ALWH SLW+MHESHH+PREG FELNDVFAI NAVPAI LL +GF +KGLVPGLCFGA
Sbjct:   155 HRALWHDSLWNMHESHHKPREGAFELNDVFAITNAVPAIGLLYYGFLNKGLVPGLCFGA 213

GO:0005506 "iron ion binding" evidence=IEA

GO:0006633 "fatty acid biosynthetic process" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM

GO:0010291 "carotene beta-ring hydroxylase activity" evidence=IGI;ISS

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0016119 "carotene metabolic process" evidence=IGI

GO:0016123 "xanthophyll biosynthetic process" evidence=IGI

TAIR|locus:2131381 BETA-OHASE 1 "beta-hydroxylase 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 642 (231.1 bits), Expect = 6.9e-63, P = 6.9e-63
 Identities = 120/175 (68%), Positives = 139/175 (79%)

Query:    52 KLNSFTVCFVLEEKKXXXXXXXXX---XXXXXXXXXXXXXAARVAEKLARKRSERFTYLV 108
             +   F+VC+V+EE++                         A R+AEKL RK+SER TYL+
Sbjct:    41 RFKRFSVCYVVEERRQNSPIENDERPESTSSTNAIDAEYLALRLAEKLERKKSERSTYLI 100

Query:   109 AAVMSSFGITSMAVMAVYYRFWWQMEGGEVPLAEMFGTFALSVGAAVGMEFWARWAHKAL 168
             AA++SSFGITSMAVMAVYYRF WQMEGGE+ + EMFGTFALSVGAAVGMEFWARWAH+AL
Sbjct:   101 AAMLSSFGITSMAVMAVYYRFSWQMEGGEISMLEMFGTFALSVGAAVGMEFWARWAHRAL 160

Query:   169 WHASLWHMHESHHRPREGPFELNDVFAIINAVPAIALLSFGFFHKGLVPGLCFGA 223
             WHASLW+MHESHH+PREGPFELNDVFAI+NA PAI LLS+GFF+KGLVPGLCFGA
Sbjct:   161 WHASLWNMHESHHKPREGPFELNDVFAIVNAGPAIGLLSYGFFNKGLVPGLCFGA 215


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.327   0.137   0.441    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      227       205   0.00096  111 3  11 22  0.39    32
                                                     31  0.47    35


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  594 (63 KB)
  Total size of DFA:  175 KB (2101 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  15.41u 0.13s 15.54t   Elapsed:  00:00:01
  Total cpu time:  15.41u 0.13s 15.54t   Elapsed:  00:00:01
  Start:  Fri May 10 03:36:03 2013   End:  Fri May 10 03:36:04 2013

GO:0005506 "iron ion binding" evidence=IEA

GO:0006633 "fatty acid biosynthetic process" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM

GO:0010291 "carotene beta-ring hydroxylase activity" evidence=IGI;ISS

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0016123 "xanthophyll biosynthetic process" evidence=IGI

GO:0016119 "carotene metabolic process" evidence=IGI

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9LTG0	BCH2_ARATH	1, ., 1, 4, ., 1, 3, ., 1, 2, 9	0.7094	0.7797	0.5841	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	GSVIVG00037718001	SubName- Full=Chromosome undetermined scaffold_91, whole genome shotgun sequence; (306 aa)
		(Vitis vinifera)
Predicted Functional Partners:
	GSVIVG00007662001	SubName- Full=Chromosome undetermined scaffold_197, whole genome shotgun sequence; (479 aa)						•	•		0.944
	ZEP	SubName- Full=Chromosome chr7 scaffold_20, whole genome shotgun sequence; (658 aa)						•	•		0.925
	GSVIVG00025310001	SubName- Full=Chromosome chr8 scaffold_34, whole genome shotgun sequence; (504 aa)						•	•		0.915
	GSVIVG00000577001	SubName- Full=Chromosome chr8 scaffold_106, whole genome shotgun sequence; (553 aa)						•	•		0.903
	GSVIVG00025926001	SubName- Full=Chromosome chr12 scaffold_36, whole genome shotgun sequence; (583 aa)						•			0.899
	GSVIVG00031502001	Chromosome chr12 scaffold_57, whole genome shotgun sequence (458 aa)							•		0.481
	GSVIVG00031501001	SubName- Full=Chromosome chr12 scaffold_57, whole genome shotgun sequence; (468 aa)							•		0.481
	GSVIVG00031499001	SubName- Full=Chromosome chr12 scaffold_57, whole genome shotgun sequence; (468 aa)							•		0.481
	GSVIVG00031498001	SubName- Full=Chromosome chr12 scaffold_57, whole genome shotgun sequence; (468 aa)							•		0.481
	GSVIVG00030066001	SubName- Full=Chromosome chr1 scaffold_5, whole genome shotgun sequence; (504 aa)							•		0.481

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	227
PLN02601	303	PLN02601, PLN02601, beta-carotene hydroxylase	2e-98
pfam04116	114	pfam04116, FA_hydroxylase, Fatty acid hydroxylase	9e-04

>gnl|CDD|178211 PLN02601, PLN02601, beta-carotene hydroxylase

 Score =  288 bits (738), Expect = 2e-98
 Identities = 129/179 (72%), Positives = 152/179 (84%), Gaps = 2/179 (1%)

Query: 45  FNGKNRRKLNSFTVCFVLEEKKQSTQIETFTEEEEEESGTQISTAARVAEKLARKRSERF 104
           FNG  RRK+   TVCFV+EE+KQS+ +E   + E   S ++I   +R+ +K  +K+SERF
Sbjct: 37  FNGFRRRKI--LTVCFVVEERKQSSPMENDEKPESTTSSSEILMTSRLLKKAEKKKSERF 94

Query: 105 TYLVAAVMSSFGITSMAVMAVYYRFWWQMEGGEVPLAEMFGTFALSVGAAVGMEFWARWA 164
           TYL+AAVMSSFGITSMA+MAVYYRF WQM+GGEV + EMFGTFALSVGAAVGMEFWARWA
Sbjct: 95  TYLIAAVMSSFGITSMAIMAVYYRFSWQMKGGEVSMLEMFGTFALSVGAAVGMEFWARWA 154

Query: 165 HKALWHASLWHMHESHHRPREGPFELNDVFAIINAVPAIALLSFGFFHKGLVPGLCFGA 223
           H+ALWH SLW+MHESHH+PREG FELNDVFAI+NAVPAI LL +GFF+KGLVPGLCFGA
Sbjct: 155 HRALWHDSLWNMHESHHKPREGAFELNDVFAIVNAVPAIGLLYYGFFNKGLVPGLCFGA 213

Length = 303

>gnl|CDD|217907 pfam04116, FA_hydroxylase, Fatty acid hydroxylase superfamily

 Score = 37.5 bits (87), Expect = 9e-04
 Identities = 18/76 (23%), Positives = 29/76 (38%), Gaps = 5/76 (6%)

Query: 151 VGAAVGMEFWARWAHKAL-WHASLWHMHESHHRPRE----GPFELNDVFAIINAVPAIAL 205
           +   +  +F   W H+ L     LW  H+ HH          F  + + A++ A+  + L
Sbjct: 2   LLGLLLFDFVEYWVHRLLHRVPFLWRFHKVHHSDESPNPLTAFRFHPLEALLLALIPLLL 61

Query: 206 LSFGFFHKGLVPGLCF 221
           L   F    LV  L  
Sbjct: 62  LLLLFGLHLLVILLGL 77

This superfamily includes fatty acid and carotene hydroxylases and sterol desaturases. Beta-carotene hydroxylase is involved in zeaxanthin synthesis by hydroxylating beta-carotene, but the enzyme may be involved in other pathways. This family includes C-5 sterol desaturase and C-4 sterol methyl oxidase. Members of this family are involved in cholesterol biosynthesis and biosynthesis a plant cuticular wax. These enzymes contain two copies of a HXHH motif. Members of this family are integral membrane proteins. Length = 114

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	227
PLN02601	303	beta-carotene hydroxylase	100.0
PF04116	114	FA_hydroxylase: Fatty acid hydroxylase superfamily	98.28
TIGR02230	100	ATPase_gene1 F0F1-ATPase subunit, putative. This m	92.41
PLN02434	237	fatty acid hydroxylase	92.03
COG3000	271	ERG3 Sterol desaturase [Lipid metabolism]	91.39
PLN02869	620	fatty aldehyde decarbonylase	91.29
PF11947	153	DUF3464: Protein of unknown function (DUF3464); In	80.27

>PLN02601 beta-carotene hydroxylase

Probab=100.00  E-value=1.7e-80  Score=556.70  Aligned_cols=215  Identities=62%  Similarity=1.027  Sum_probs=188.2

Q ss_pred             Ccccccc-ccccccccccccccCCCCCCCCCCCcccCCcccccccccccccCCCCceeEEEEeccccccccccccchhhh
Q 027183            1 MAVGLLA-AIVPKPFCLLTTKLQPSSLLTTKPAPLFAPLGTHRGFFNGKNRRKLNSFTVCFVLEEKKQSTQIETFTEEEE   79 (227)
Q Consensus         1 ma~~~s~-a~~~~~~~~~~~~~~~~~~~~~~~~~~f~p~~~~~~~~~~~~~~~~~~~~vc~v~~~~~~~~~~~~~~~~~~   79 (227)
                      ||+|||+ |+|++|.+.     ..+..+.|+++..|+|....   .+.|||   ++++||||+||+++.+++++++|+++
T Consensus         1 ma~~~~~~~~t~~~l~~-----~~~~~~~~~~~~~f~~~~~~---~~~~~~---~~~~~c~v~~~~~~~~~~~~~~~~~~   69 (303)
T PLN02601          1 MAAGLSTIAVTLKPLHR-----SDFRLNHPISLAVFPPSLRF---NGFRRR---KILTVCFVVEERKQSSPMENDEKPES   69 (303)
T ss_pred             CcccccccccccccCcc-----cCccCCCCcccccCCHHHHh---hhcccC---CceeEEEEeccccccccccccchhhh
Confidence            8999998 999999643     35555566667778886311   122344   56899999999999887777666654


Q ss_pred             hhhhhhhchHHHHHHHHHhhhhhhhHHHHHHHHHhhhhhHHHHHHHhhhhhhhccCCCccHHHHHHHHHHHHHHHHHHHH
Q 027183           80 EESGTQISTAARVAEKLARKRSERFTYLVAAVMSSFGITSMAVMAVYYRFWWQMEGGEVPLAEMFGTFALSVGAAVGMEF  159 (227)
Q Consensus        80 ~~~~~~~~~~~r~~~~~~rk~~er~ty~~aa~~ss~gi~s~a~~a~yyrf~w~m~~g~~p~~em~~t~~l~lga~vgMEf  159 (227)
                      ++.+++...++|++||++|||+||+||++||||||+||||||++||||||+|||||||||+.||+++++|+++||++|||
T Consensus        70 ~~~~~~~~~~~~~~~~~~~k~~er~ty~~aa~~ss~gi~s~a~~a~y~rf~~~~~~g~~p~~em~~~~al~lgtfvgMEf  149 (303)
T PLN02601         70 TTSSSEILMTSRLLKKAEKKKSERFTYLIAAVMSSFGITSMAIMAVYYRFSWQMKGGEVSMLEMFGTFALSVGAAVGMEF  149 (303)
T ss_pred             hhhhhhhhhHHHHHHHHHHhhhhhhHHHHHHHHHhhcHHHHHHHHHHHHHhhccCCCCcCHHHHHHHHHHHHHHHHHHHH
Confidence            44444444569999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhhhhhhhccCCCCCCCCcccchhhhhhhHHHHHHHHHhhhcccCCccccccccccC
Q 027183          160 WARWAHKALWHASLWHMHESHHRPREGPFELNDVFAIINAVPAIALLSFGFFHKGLVPGLCFGAVSS  226 (227)
Q Consensus       160 ~Aw~aHKylmHG~LW~lHksHH~p~~G~FE~NDlFaiifAvpAiaL~~~Gf~~~gl~~~lcfGaGig  226 (227)
                      ||||+|||+|||+||+||+|||+|++|+||+||+|||+||+|||+|+++|+++++++|++|||+|+|
T Consensus       150 ~Aw~aHKYvMHG~LW~lH~sHH~Pr~g~FE~NDlFaVifAvpAIaL~~~G~~~~g~~p~~~fgiGlG  216 (303)
T PLN02601        150 WARWAHRALWHDSLWNMHESHHKPREGAFELNDVFAIVNAVPAIGLLYYGFFNKGLVPGLCFGAGLG  216 (303)
T ss_pred             HHHHHHHHHHHhcchhhhhhcCCCCCCCcccccchhhhhHHHHHHHHHHhhccccccHHHHHHHHHh
Confidence            9999999999999999999999999999999999999999999999999999999999999877765

>PF04116 FA_hydroxylase: Fatty acid hydroxylase superfamily; InterPro: IPR006694 This superfamily includes fatty acid and carotene hydroxylases and sterol desaturases

Probab=98.28  E-value=2.7e-07  Score=67.82  Aligned_cols=37  Identities=35%  Similarity=0.907  Sum_probs=31.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHH--hhhhhhhccCCCCC-CCCc
Q 027183          151 VGAAVGMEFWARWAHKALWH--ASLWHMHESHHRPR-EGPF  188 (227)
Q Consensus       151 lga~vgMEf~Aw~aHKylmH--G~LW~lHksHH~p~-~G~F  188 (227)
                      +++++.+|++.||+|| +||  +++|.+|+.||++. ..++
T Consensus         2 ~~~~l~~d~~~Y~~HR-l~H~~~~l~~~H~~HH~~~~~~~~   41 (114)
T PF04116_consen    2 LLGFLLWDFWEYWMHR-LLHKIPFLWRIHKVHHSPKNPTPL   41 (114)
T ss_pred             eeeHHHHHHHHHHHHH-HHhcCchHHHHHHHHhCCcccCch
Confidence            5678999999999999 999  68999999999763 3455

Beta-carotene hydroxylase is involved in zeaxanthin synthesis by hydroxylating beta-carotene, but the enzyme may be involved in other pathways []. This family includes C-5 sterol desaturase and C-4 sterol methyl oxidase. Members of this family are involved in cholesterol biosynthesis and biosynthesis a plant cuticular wax. These enzymes contain two copies of a HXHH motif. Members of this family are integral membrane proteins.; GO: 0005506 iron ion binding, 0016491 oxidoreductase activity, 0006633 fatty acid biosynthetic process, 0055114 oxidation-reduction process

>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative

Probab=92.41  E-value=0.96  Score=36.18  Aligned_cols=65  Identities=14%  Similarity=0.137  Sum_probs=36.5

Q ss_pred             hhhhhhhHHHHHHHHHhhhhhHHHHHHHhhhhhhhcc---CCCccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 027183           98 RKRSERFTYLVAAVMSSFGITSMAVMAVYYRFWWQME---GGEVPLAEMFGTFALSVGAAVGMEFWARWAHK  166 (227)
Q Consensus        98 rk~~er~ty~~aa~~ss~gi~s~a~~a~yyrf~w~m~---~g~~p~~em~~t~~l~lga~vgMEf~Aw~aHK  166 (227)
                      ||+.+|..+.--+.+|++|+.-.+...+-+=.=+-++   +++..    +...++.+|.++|+=.+=.|+||
T Consensus        31 ~r~~~~~~~~~l~~~g~IG~~~v~pil~G~~lG~WLD~~~~t~~~----~tl~~lllGv~~G~~n~w~wi~r   98 (100)
T TIGR02230        31 RKNATRSIWEGLGMFGLIGWSVAIPTLLGVAVGIWLDRHYPSPFS----WTLTMLIVGVVIGCLNAWHWVSR   98 (100)
T ss_pred             HhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcH----HHHHHHHHHHHHHHHHHHHHHhc
Confidence            3335788899899999999865543333222222232   34332    33335566666666555455554

This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.

>PLN02434 fatty acid hydroxylase

Probab=92.03  E-value=0.7  Score=41.60  Aligned_cols=40  Identities=20%  Similarity=0.383  Sum_probs=28.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHh---------hhhhhhccCCC-CCCC
Q 027183          147 FALSVGAAVGMEFWARWAHKALWHA---------SLWHMHESHHR-PREG  186 (227)
Q Consensus       147 ~~l~lga~vgMEf~Aw~aHKylmHG---------~LW~lHksHH~-p~~G  186 (227)
                      +++++++++.-=++-|..||++.|.         ....+|..||+ |.++
T Consensus        84 ~~~~~~G~~~wtl~EY~lHRflfH~~p~~~~~~~~hfllHg~HH~~P~D~  133 (237)
T PLN02434         84 VLMVAFGVFIWTLLEYILHRFLFHIKTKSYWGNTAHYLLHGCHHKHPMDG  133 (237)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHHhhcCCCCC
Confidence            4444555555566678899999994         45568999994 6654

>COG3000 ERG3 Sterol desaturase [Lipid metabolism]

Probab=91.39  E-value=0.93  Score=40.17  Aligned_cols=36  Identities=28%  Similarity=0.457  Sum_probs=29.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHh-hhhhhhccCCC
Q 027183          147 FALSVGAAVGMEFWARWAHKALWHA-SLWHMHESHHR  182 (227)
Q Consensus       147 ~~l~lga~vgMEf~Aw~aHKylmHG-~LW~lHksHH~  182 (227)
                      .+..+.+++.-|++-+|+||..=+. ++|.+|+-||.
T Consensus        96 ~l~~~~~~~~~D~~~Y~~HR~~H~~~~~w~~H~~HH~  132 (271)
T COG3000          96 ALQLLLAFLFLDLGYYWAHRLLHRVPLLWAFHKVHHS  132 (271)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhhcC
Confidence            4455668889999999999997777 47999999995

>PLN02869 fatty aldehyde decarbonylase

Probab=91.29  E-value=0.35  Score=48.97  Aligned_cols=72  Identities=24%  Similarity=0.359  Sum_probs=42.8

Q ss_pred             CccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhhhhhccCCCCC-CC-------CcccchhhhhhhHHHHHHHHH
Q 027183          137 EVPLAEMFGTFALSVGAAVGMEFWARWAHKALWHA-SLWHMHESHHRPR-EG-------PFELNDVFAIINAVPAIALLS  207 (227)
Q Consensus       137 ~~p~~em~~t~~l~lga~vgMEf~Aw~aHKylmHG-~LW~lHksHH~p~-~G-------~FE~NDlFaiifAvpAiaL~~  207 (227)
                      .+|+-..-+.++.++.=+..+|++-+|.||..=|. ++|..|+-||... ..       |+|-.=.+.+++++|.+.+++
T Consensus       118 ~~P~W~~~g~l~~~Llhv~~~Df~fYW~HRllH~~~LYwr~HkvHHss~~~~P~Ts~~HP~~E~L~y~ll~~IPLllli~  197 (620)
T PLN02869        118 HMPLWRTDGVLITILLHMGPVEFLYYWLHRALHHHYLYSRYHSHHHSSIVTEPITSVIHPFAEHIAYFLLFAIPLLTTIF  197 (620)
T ss_pred             cCcccccchHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhhccCCCCCCchhhhcCcHHHHHHHHHHHHHHHHHHhh
Confidence            34444333333333434445899999999986554 5799999999742 22       332222345566777765544


Q ss_pred             h
Q 027183          208 F  208 (227)
Q Consensus       208 ~  208 (227)
                      .
T Consensus       198 ~  198 (620)
T PLN02869        198 T  198 (620)
T ss_pred             c
Confidence            3

>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised

Probab=80.27  E-value=12  Score=32.00  Aligned_cols=57  Identities=18%  Similarity=0.296  Sum_probs=34.6

Q ss_pred             HHHHHHHhhhhhhhHHHHHHHHHhhhhhHHHHHHHhhhhhhhccC--CCccHHHHH-HHHHHHHHHHHHHH
Q 027183           91 RVAEKLARKRSERFTYLVAAVMSSFGITSMAVMAVYYRFWWQMEG--GEVPLAEMF-GTFALSVGAAVGME  158 (227)
Q Consensus        91 r~~~~~~rk~~er~ty~~aa~~ss~gi~s~a~~a~yyrf~w~m~~--g~~p~~em~-~t~~l~lga~vgME  158 (227)
                      -|++|+.|+           |+-++||-....+++.-=|+|-.+.  .|+|-.-.+ .+++.+..+++|.-
T Consensus        56 ~Vs~RM~rR-----------m~~~~GiP~~lG~~~f~~~y~l~~~~~~dvP~~~~~~~S~~~Fg~gllGis  115 (153)
T PF11947_consen   56 VVSNRMLRR-----------MAVFVGIPTALGVAVFVVFYYLKSRQIVDVPPWAVLLVSLVFFGLGLLGIS  115 (153)
T ss_pred             HHHHHHHHH-----------HHHHhchHHHHHHHHHHHHHHHHhccccccCchHHHHHHHHHHHHHHHhhh
Confidence            467777664           4556677666666666667776654  577755554 44444455666543

This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00