Citrus Sinensis ID: 027199

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220------
Protein Sequence
MKQWQAAVFPLFLTSLMYAGSMVLKSLLLLNSWTTDMNNSGGLSLGCIKIVLWSLRAQMFAVASNILAWRNFVVAPLTEELVFRACMIPLLLCGGFKINTIIFLCPVFFSLAHLNHLMEIYSAQNFSLLKASMIVGLQLGYTVVFGWYASFLFIRTGHLAAPLIAHIFCNYMGLPVLFARNRGLVSVAFVAGMVAFLWLLFPITRPDLYNDRTNNCRCLHGYCSWN
Secondary Structure (PSIPRED)
cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHcccccccccccHHHHHHHcHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHcccccccEEEEEcHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHccccccHHcccccccccccccEcccc
Coil and Loop (DISEMBL)
MKQWQAAVFPLFLTSLMYAGSMVLKSLLLLNSWttdmnnsgglslGCIKIVLWSLRAQMFAVASNILAWRNFVVAPLTEELVFRACMIplllcggfkintIIFLCPVFFSLAHLNHLMEIYSAQNFSLLKASMIVGLQLGYTVVFGWYASFLFIRTGHLAAPLIAHIFCNYMGLPVLFARNRGLVSVAFVAGMVAFLWLLfpitrpdlyndrtnncrclhgycswn
Flexible Loop (DISEMBL)
MKQWQAAVFPLFLTSLMYAGSMVLKSLLLLNSWTTDMNNSGGLSLGCIKIVLWSLRAQMFAVASNILAWRNFVVAPLTEELVFRACMIPLLLCGGFKINTIIFLCPVFFSLAHLNHLMEIYSAQNFSLLKASMIVGLQLGYTVVFGWYASFLFIRTGHLAAPLIAHIFCNYMGLPVLFARNRGLVSVAFVAGMVAFLWLLFPITRPDLYNDRTNNCRClhgycswn
Low Complexity Region (SEG)
MKQWQAAVFPLFLTSLMYAGSMVLKSLLLLNSWTTDMNNSGGLSLGCIKIVLWSLRAQMFAVASNILAWRNFVVAPLTEELVFRACMIPLLLCGGFKINTIIFLCPVFFSLAHLNHLMEIYSAQNFSLLKASMIVGLQLGYTVVFGWYASFLFIRTGHLAAPLIAHIFCNYMGLPVLFARNRGLVSVAFVAGMVAFLWLLFPITRPDLYNDRTNNCRCLHGYCSWN
Disordered region (IsUnstruct)
***WQAAVFPLFLTSLMYAGSMVLKSLLLLNSWTTDMNNSGGLSLGCIKIVLWSLRAQMFAVASNILAWRNFVVAPLTEELVFRACMIPLLLCGGFKINTIIFLCPVFFSLAHLNHLMEIYSAQNFSLLKASMIVGLQLGYTVVFGWYASFLFIRTGHLAAPLIAHIFCNYMGLPVLFARNRGLVSVAFVAGMVAFLWLLFPITRPDLYNDRTNNCRCLHGYCSW*
Disordered Region (DISOPRED)
**QWQAAVFPLFLTSLMYAGSMVLKSLLLLNSWTTDMNNSGGLSLGCIKIVLWSLRAQMFAVASNILAWRNFVVAPLTEELVFRACMIPLLLCGGFKINTIIFLCPVFFSLAHLNHLMEIYSAQNFSLLKASMIVGLQLGYTVVFGWYASFLFIRTGHLAAPLIAHIFCNYMGLPVLFARNRGLVSVAFVAGMVAFLWLLFPITRPDLYNDRTNNCRCLHGYCSW*
Disordered Region (DISEMBL)
MKQWQAAVFPLFLTSLMYAGSMVLKSLLLLNSWTTDMNNSGGLSLGCIKIVLWSLRAQMFAVASNILAWRNFVVAPLTEELVFRACMIPLLLCGGFKINTIIFLCPVFFSLAHLNHLMEIYSAQNFSLLKASMIVGLQLGYTVVFGWYASFLFIRTGHLAAPLIAHIFCNYMGLPVLFARNRGLVSVAFVAGMVAFLWLLFPITRPDLYNDRTNNCRCLHGYCSWN
Disordered Region (DISPRO)
MKQWQAAVFPLFLTSLMYAGSMVLKSLLLLNSWTTDMNNSGGLSLGCIKIVLWSLRAQMFAVASNILAWRNFVVAPLTEELVFRACMIPLLLCGGFKINTIIFLCPVFFSLAHLNHLMEIYSAQNFSLLKASMIVGLQLGYTVVFGWYASFLFIRTGHLAAPLIAHIFCNYMGLPVLFARNRGLVSVAFVAGMVAFLWLLFPITRPDLYNDRTNNCRCLHGYCSWN
Transmembrane Helix (TMHMM)
iiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHiiiiiiiiiHHHHHHHHHHHHHHHHHooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MKQWQAAVFPLFLTSLMYAGSMVLKSLLLLNSWTTDMNNSGGLSLGCIKIVLWSLRAQMFAVASNILAWRNFVVAPLTEELVFRACMIPLLLCGGFKINTIIFLCPVFFSLAHLNHLMEIYSAQNFSLLKASMIVGLQLGYTVVFGWYASFLFIRTGHLAAPLIAHIFCNYMGLPVLFARNRGLVSVAFVAGMVAFLWLLFPITRPDLYNDRTNNCRCLHGYCSWN
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	226	2.2.26 [Sep-21-2011]
Q8GW19	311	CAAX prenyl protease 2 OS	yes	no	0.977	0.710	0.650	2e-79
Q9U1H8	302	CAAX prenyl protease 2 OS	yes	no	0.778	0.582	0.346	2e-25
P57791	329	CAAX prenyl protease 2 OS	yes	no	0.477	0.328	0.504	9e-25
Q9Y256	329	CAAX prenyl protease 2 OS	yes	no	0.477	0.328	0.504	2e-24
O94448	271	Probable CAAX prenyl prot	yes	no	0.557	0.464	0.390	2e-22
B0BMW8	308	CAAX prenyl protease 2 OS	no	no	0.384	0.282	0.396	7e-15
A6H7A0	308	CAAX prenyl protease 2 OS	yes	no	0.384	0.282	0.396	1e-14
Q03530	315	CAAX prenyl protease 2 OS	yes	no	0.588	0.422	0.297	1e-08

>sp|Q8GW19|FACE2_ARATH CAAX prenyl protease 2 OS=Arabidopsis thaliana GN=FACE2 PE=2 SV=2

 Score =  295 bits (755), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 145/223 (65%), Positives = 170/223 (76%), Gaps = 2/223 (0%)

Query: 4   WQAAVFPLFLTSLMYAGSMVLKSLLLLNSWTTDMNNSGGLSLGCIKIVLWSLRAQMFAVA 63
           WQ  V+PL LTSL+YAGS+VLK   LL SW    N  G  S   I+    ++ A +   A
Sbjct: 91  WQGVVYPLLLTSLVYAGSLVLKLFTLLESWKE--NGGGCSSFNYIRSFFQTIPASVLTSA 148

Query: 64  SNILAWRNFVVAPLTEELVFRACMIPLLLCGGFKINTIIFLCPVFFSLAHLNHLMEIYSA 123
           SN+  WRNF+VAP+TEELVFR+CMIPLLLC GF+INT IFLCPV FSLAHLNH  E+Y  
Sbjct: 149 SNVSVWRNFIVAPVTEELVFRSCMIPLLLCAGFRINTAIFLCPVLFSLAHLNHFREMYIR 208

Query: 124 QNFSLLKASMIVGLQLGYTVVFGWYASFLFIRTGHLAAPLIAHIFCNYMGLPVLFARNRG 183
            N S L+AS+IVGLQLGYTV+FG YASFLFIRTGHLAAPL AHIFCNYMGLPVL+A  +G
Sbjct: 209 HNRSYLRASLIVGLQLGYTVIFGAYASFLFIRTGHLAAPLFAHIFCNYMGLPVLYANGKG 268

Query: 184 LVSVAFVAGMVAFLWLLFPITRPDLYNDRTNNCRCLHGYCSWN 226
           LVS AF+ G+V F+ LLFP+T+P +YND TN+C C  GYC WN
Sbjct: 269 LVSAAFLGGVVGFVLLLFPLTKPLMYNDSTNDCPCWLGYCLWN 311

Proteolytically removes the C-terminal three residues of farnesylated and geranylated proteins. The substrate specificity is only partially overlaping with that of FACE1.
Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 4EC: .EC: 2EC: 2EC: .EC: -

>sp|Q9U1H8|FACE2_DROME CAAX prenyl protease 2 OS=Drosophila melanogaster GN=Sras PE=2 SV=3

 Score =  116 bits (290), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 78/225 (34%), Positives = 120/225 (53%), Gaps = 49/225 (21%)

Query: 4   WQAAVFPLFLTSLMYAGSMVL-------KSLLLLNSWTTDMNNSGGLSLGCIKIVLWSLR 56
           WQA V P  LT L++ G + +       +S   L+ W            G    ++W   
Sbjct: 104 WQAVVIPYSLTVLLFLGPIFVNMQNESVRSYFDLDYWR-----------GSFGSIIWV-- 150

Query: 57  AQMFAVASNILAWRNFVVAPLTEELVFRACMIPLLLCGGFKINTIIFLCPVFFSLAHLNH 116
                        RN V+APL+EE VFRACM+PL+L   F     +F+ P+FF +AHL+H
Sbjct: 151 -------------RNHVIAPLSEEFVFRACMMPLIL-QSFSPLVAVFITPLFFGVAHLHH 196

Query: 117 LMEIYSAQNFSL---LKASMIVGL-QLGYTVVFGWYASFLFIRTGHLAAPLIAHIFCNYM 172
           +     A+  SL   L  ++++GL Q  YT +FG+Y++FLF RTGH+ AP++ H FCN+M
Sbjct: 197 I-----AERLSLGVELSTALLIGLFQFIYTTLFGFYSAFLFARTGHVMAPILVHAFCNHM 251

Query: 173 GLPVLFAR------NRGLVSVAFVAGMVAFLWLLFPITRPDLYND 211
           GLP L          R +  + ++AG V +++L+   T P +Y++
Sbjct: 252 GLPDLQDLWQQDLWRRVVAIILYLAGFVGWMFLVPLATDPSIYDN 296

Proteolytically removes the C-terminal three residues of farnesylated and geranylated proteins.

Drosophila melanogaster (taxid: 7227)

EC: 3

EC: .

EC: 4

EC: .

EC: 2

EC: 2

EC: .

EC: -

>sp|P57791|FACE2_MOUSE CAAX prenyl protease 2 OS=Mus musculus GN=Rce1 PE=2 SV=1

 Score =  113 bits (283), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 56/111 (50%), Positives = 73/111 (65%), Gaps = 3/111 (2%)

Query: 70  RNFVVAPLTEELVFRACMIPLLL-CGGFKINTIIFLCPVFFSLAHLNHLMEIYSAQNFSL 128
           RN V+APLTEELVFRACM+P+L  C G  +   +F CP+FF +AH +H++E    +  S+
Sbjct: 166 RNQVIAPLTEELVFRACMLPMLAPCTG--LGPAVFTCPLFFGVAHFHHIIEQLRFRQSSV 223

Query: 129 LKASMIVGLQLGYTVVFGWYASFLFIRTGHLAAPLIAHIFCNYMGLPVLFA 179
               +    Q  YT VFG Y +FLFIRTGHL  P++ H FCNYMG P + A
Sbjct: 224 GSIFVSAAFQFSYTAVFGAYTAFLFIRTGHLIGPVLCHSFCNYMGFPAVCA 274

Proteolytically removes the C-terminal three residues of farnesylated and geranylated proteins. Seems to be able to process K-Ras, N-Ras, H-Ras, RAP1B and G-gamma-1.

Mus musculus (taxid: 10090)

EC: 3

EC: .

EC: 4

EC: .

EC: 2

EC: 2

EC: .

EC: -

>sp|Q9Y256|FACE2_HUMAN CAAX prenyl protease 2 OS=Homo sapiens GN=RCE1 PE=1 SV=1

 Score =  112 bits (281), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 56/111 (50%), Positives = 73/111 (65%), Gaps = 3/111 (2%)

Query: 70  RNFVVAPLTEELVFRACMIPLLL-CGGFKINTIIFLCPVFFSLAHLNHLMEIYSAQNFSL 128
           RN V+APLTEELVFRACM+P+L  C G  +   +F CP+FF +AH +H++E    +  S+
Sbjct: 166 RNQVIAPLTEELVFRACMLPMLAPCMG--LGPAVFTCPLFFGVAHFHHIIEQLRFRQSSV 223

Query: 129 LKASMIVGLQLGYTVVFGWYASFLFIRTGHLAAPLIAHIFCNYMGLPVLFA 179
               +    Q  YT VFG Y +FLFIRTGHL  P++ H FCNYMG P + A
Sbjct: 224 GNIFLSAAFQFSYTAVFGAYTAFLFIRTGHLIGPVLCHSFCNYMGFPAVCA 274

Proteolytically removes the C-terminal three residues of farnesylated and geranylated proteins. Seems to be able to process K-Ras, N-Ras, H-Ras, RAP1B and G-gamma-1.

Homo sapiens (taxid: 9606)

EC: 3

EC: .

EC: 4

EC: .

EC: 2

EC: 2

EC: .

EC: -

>sp|O94448|RCE1_SCHPO Probable CAAX prenyl protease 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1687.02 PE=3 SV=1

 Score =  105 bits (263), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 50/128 (39%), Positives = 75/128 (58%), Gaps = 2/128 (1%)

Query: 64  SNILAWRNFVVAPLTEELVFRACMIPLLLCGGFKINTIIFLCPVFFSLAHLNHLMEIYSA 123
           SN +AWRN ++ PL+EEL FR C++P+    G+    IIF+ P+ F +AH++H  E   A
Sbjct: 111 SNAIAWRNIIIGPLSEELTFRCCIVPICEAAGWSRLKIIFVAPLLFGMAHIHHTYEFLLA 170

Query: 124 QNFSLLKASMIVGLQLGYTVVFGWYASFLFIRTGHLAAPLIAHIFCNYMGLPVLFAR--N 181
              + + A++   +Q  YT VFGWY + LF+ T  L    + H FCN MGLP L+ +  N
Sbjct: 171 YPNAYIAAALQTVVQFSYTTVFGWYTTHLFLSTHSLFPSFLVHAFCNSMGLPTLYGKIGN 230

Query: 182 RGLVSVAF 189
           R    + +
Sbjct: 231 RNQTRIYY 238

Proteolytically removes the C-terminal three residues of farnesylated proteins.

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

EC: 3

EC: .

EC: 4

EC: .

EC: 2

EC: 2

EC: .

EC: -

>sp|B0BMW8|FACE2_RAT CAAX prenyl protease 2 OS=Rattus norvegicus GN=Rce1 PE=2 SV=1

 Score = 80.9 bits (198), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 44/111 (39%), Positives = 61/111 (54%), Gaps = 24/111 (21%)

Query: 70  RNFVVAPLTEELVFRACMIPLLL-CGGFKINTIIFLCPVFFSLAHLNHLMEIYSAQNFSL 128
           RN V+APLTEELVFRACM+P+L  C G  +   +F CP+FF +AH +H++E    +  S+
Sbjct: 166 RNQVIAPLTEELVFRACMLPMLAPCTG--LGPAVFTCPLFFGVAHFHHIIEQLRFRQSSV 223

Query: 129 LKASMIVGLQLGYTVVFGWYASFLFIRTGHLAAPLIAHIFCNYMGLPVLFA 179
                                  +F+  GHL  P++ H FCNYMG P + A
Sbjct: 224 ---------------------GSIFLSAGHLIGPVLCHSFCNYMGFPAVCA 253

Proteolytically removes the C-terminal three residues of farnesylated and geranylated proteins. Seems to be able to process K-Ras, N-Ras, H-Ras, RAP1B and G-gamma-1.

Rattus norvegicus (taxid: 10116)

EC: 3

EC: .

EC: 4

EC: .

EC: 2

EC: 2

EC: .

EC: -

>sp|A6H7A0|FACE2_BOVIN CAAX prenyl protease 2 OS=Bos taurus GN=RCE1 PE=2 SV=1

 Score = 80.1 bits (196), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 44/111 (39%), Positives = 60/111 (54%), Gaps = 24/111 (21%)

Query: 70  RNFVVAPLTEELVFRACMIPLLL-CGGFKINTIIFLCPVFFSLAHLNHLMEIYSAQNFSL 128
           RN V+APLTEELVFRACM+P+L  C G  +   +F CP+FF +AH +H+ E    +  S+
Sbjct: 166 RNQVIAPLTEELVFRACMLPMLAPCTG--LGPAVFTCPLFFGVAHFHHIFEQLRFRQSSV 223

Query: 129 LKASMIVGLQLGYTVVFGWYASFLFIRTGHLAAPLIAHIFCNYMGLPVLFA 179
                                  +F+  GHL  P++ H FCNYMG P + A
Sbjct: 224 ---------------------GSIFLSAGHLIGPVLCHSFCNYMGFPAVCA 253

Proteolytically removes the C-terminal three residues of farnesylated and geranylated proteins. Seems to be able to process K-Ras, N-Ras, H-Ras, RAP1B and G-gamma-1.

Bos taurus (taxid: 9913)

EC: 3

EC: .

EC: 4

EC: .

EC: 2

EC: 2

EC: .

EC: -

>sp|Q03530|RCE1_YEAST CAAX prenyl protease 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RCE1 PE=1 SV=1

 Score = 60.5 bits (145), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 67/138 (48%), Gaps = 5/138 (3%)

Query: 65  NILAWRNFVVAPLTEELVFRACMIP----LLLCGGFKINTIIFLCPVFFSLAHLNHLMEI 120
           NI ++RNF+ AP+TEE+ + + ++     L+         + +   +FF LAH +H  E 
Sbjct: 142 NIWSFRNFIFAPITEEIFYTSMLLTTYLNLIPHSQLSYQQLFWQPSLFFGLAHAHHAYEQ 201

Query: 121 YSAQNFSLLKASMIVGLQLGYTVVFGWYASFLFIRT-GHLAAPLIAHIFCNYMGLPVLFA 179
               + + +   +    Q+ YT +FG    F+F+RT G+L   +I H  CN MG P    
Sbjct: 202 LQEGSMTTVSILLTTCFQILYTTLFGGLTKFVFVRTGGNLWCCIILHALCNIMGFPGPSR 261

Query: 180 RNRGLVSVAFVAGMVAFL 197
            N     V   AG ++ L
Sbjct: 262 LNLHFTVVDKKAGRISKL 279

Proteolytically removes the C-terminal three residues of farnesylated a-factor mating pheromone and of RAS.

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

EC: 3

EC: .

EC: 4

EC: .

EC: 2

EC: 2

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	226
225440914	316	PREDICTED: CAAX prenyl protease 2 [Vitis	0.986	0.705	0.699	2e-88
449462982	313	PREDICTED: CAAX prenyl protease 2-like [	0.986	0.712	0.681	5e-85
302746511	327	farnesylated protein-converting enzyme 2	0.986	0.681	0.663	1e-82
356537093	489	PREDICTED: CAAX prenyl protease 2-like [	0.986	0.456	0.641	3e-81
79594437	311	CAAX prenyl protease 2 [Arabidopsis thal	0.977	0.710	0.650	1e-77
26453264	311	unknown protein [Arabidopsis thaliana] g	0.977	0.710	0.645	2e-76
297823435	311	prenyl-dependent CAAX protease [Arabidop	0.977	0.710	0.645	9e-71
224090659	270	predicted protein [Populus trichocarpa]	0.800	0.670	0.718	4e-70
242087607	311	hypothetical protein SORBIDRAFT_09g01752	0.938	0.681	0.563	7e-65
212723560	313	uncharacterized protein LOC100192945 [Ze	0.942	0.680	0.556	4e-64

>gi|225440914|ref|XP_002282860.1| PREDICTED: CAAX prenyl protease 2 [Vitis vinifera] gi|297740101|emb|CBI30283.3| unnamed protein product [Vitis vinifera]

 Score =  330 bits (847), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 156/223 (69%), Positives = 187/223 (83%)

Query: 4   WQAAVFPLFLTSLMYAGSMVLKSLLLLNSWTTDMNNSGGLSLGCIKIVLWSLRAQMFAVA 63
           WQA VFPL LTSLMYAGS++LKSLL+++SW    N   G+++  +K V  ++   +F+ A
Sbjct: 94  WQAMVFPLSLTSLMYAGSLLLKSLLIVSSWKQYKNQGRGIAINHVKNVPQNILNWVFSTA 153

Query: 64  SNILAWRNFVVAPLTEELVFRACMIPLLLCGGFKINTIIFLCPVFFSLAHLNHLMEIYSA 123
           S+ILAWRN+VVAP TEELVFRACMIPLLLCGGFK  ++IFLCP+FFSLAHLNHL+E YS 
Sbjct: 154 SSILAWRNYVVAPFTEELVFRACMIPLLLCGGFKTYSVIFLCPIFFSLAHLNHLLEFYSK 213

Query: 124 QNFSLLKASMIVGLQLGYTVVFGWYASFLFIRTGHLAAPLIAHIFCNYMGLPVLFARNRG 183
            N SLLKA M+ GLQLGYTV+FG YAS LFIRTGH+ AP++AHIFCN+MGLPVLFA+ +G
Sbjct: 214 HNRSLLKAFMVAGLQLGYTVIFGSYASLLFIRTGHIVAPIVAHIFCNFMGLPVLFAQGKG 273

Query: 184 LVSVAFVAGMVAFLWLLFPITRPDLYNDRTNNCRCLHGYCSWN 226
           +VSVAFVAGMV FLWLLFP+T P LYNDRT+NCRC HGYC+W 
Sbjct: 274 MVSVAFVAGMVGFLWLLFPVTDPALYNDRTDNCRCWHGYCTWT 316

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449462982|ref|XP_004149214.1| PREDICTED: CAAX prenyl protease 2-like [Cucumis sativus] gi|449500939|ref|XP_004161235.1| PREDICTED: CAAX prenyl protease 2-like [Cucumis sativus]

 Score =  319 bits (818), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 152/223 (68%), Positives = 179/223 (80%)

Query: 4   WQAAVFPLFLTSLMYAGSMVLKSLLLLNSWTTDMNNSGGLSLGCIKIVLWSLRAQMFAVA 63
           WQA +FPL LTS MY GSMVLK LLL++SW   MN+ G   L C +++   +     +  
Sbjct: 91  WQAVIFPLSLTSFMYVGSMVLKFLLLVDSWREHMNHGGDSLLNCARLLWTRVLDWGLSTV 150

Query: 64  SNILAWRNFVVAPLTEELVFRACMIPLLLCGGFKINTIIFLCPVFFSLAHLNHLMEIYSA 123
           SNILAWRN+VVAPLTEELVFRACMIP+LL GGFK  T+IFLCP+ FSLAHLNH ME YS 
Sbjct: 151 SNILAWRNYVVAPLTEELVFRACMIPILLSGGFKPTTVIFLCPILFSLAHLNHFMEYYSK 210

Query: 124 QNFSLLKASMIVGLQLGYTVVFGWYASFLFIRTGHLAAPLIAHIFCNYMGLPVLFARNRG 183
           QN +L KA M+VGLQLGYTVVFG YASFLF+RTGHL APL+AH+FCN+MGLP +F+R RG
Sbjct: 211 QNNNLAKAVMVVGLQLGYTVVFGSYASFLFVRTGHLLAPLVAHVFCNFMGLPAIFSRGRG 270

Query: 184 LVSVAFVAGMVAFLWLLFPITRPDLYNDRTNNCRCLHGYCSWN 226
           +VS+AF+ GMV FLWLLFP+T P L+N+RTNNCRC  GYCSWN
Sbjct: 271 VVSLAFLVGMVGFLWLLFPMTSPHLFNERTNNCRCWQGYCSWN 313

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|302746511|gb|ADL62870.1| farnesylated protein-converting enzyme 2 [Prunus persica]

 Score =  311 bits (798), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 148/223 (66%), Positives = 182/223 (81%)

Query: 4   WQAAVFPLFLTSLMYAGSMVLKSLLLLNSWTTDMNNSGGLSLGCIKIVLWSLRAQMFAVA 63
           WQA +FPL LT+LMY GS+VLKSLLL+++    MN  GGLS   IK +   + A   ++A
Sbjct: 105 WQAVIFPLTLTALMYGGSLVLKSLLLMSALREHMNFGGGLSFNNIKNLSEEIVACSRSIA 164

Query: 64  SNILAWRNFVVAPLTEELVFRACMIPLLLCGGFKINTIIFLCPVFFSLAHLNHLMEIYSA 123
           S++L WR +VVAPLTEELVFRACM+PLLLCGGF+ +T+IFLCP+FFSLAHLNHL ++YS 
Sbjct: 165 SDVLVWRTYVVAPLTEELVFRACMLPLLLCGGFQKSTVIFLCPIFFSLAHLNHLKDVYSK 224

Query: 124 QNFSLLKASMIVGLQLGYTVVFGWYASFLFIRTGHLAAPLIAHIFCNYMGLPVLFARNRG 183
           QN++L KA + +GLQLGYTVVFG YASFLFI+TGH  APL+AH FCN+MGLPVL +R +G
Sbjct: 225 QNYNLTKAVLAIGLQLGYTVVFGSYASFLFIQTGHFLAPLVAHAFCNFMGLPVLVSRGKG 284

Query: 184 LVSVAFVAGMVAFLWLLFPITRPDLYNDRTNNCRCLHGYCSWN 226
           +VSVA VAG+V FLWLLFP+T P+LYNDRT+NC C  GYCS N
Sbjct: 285 IVSVASVAGIVGFLWLLFPMTHPELYNDRTDNCVCWQGYCSGN 327

Source: Prunus persica

Species: Prunus persica

Genus: Prunus

Family: Rosaceae

Order: Rosales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356537093|ref|XP_003537065.1| PREDICTED: CAAX prenyl protease 2-like [Glycine max]

 Score =  306 bits (785), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 143/223 (64%), Positives = 173/223 (77%)

Query: 4   WQAAVFPLFLTSLMYAGSMVLKSLLLLNSWTTDMNNSGGLSLGCIKIVLWSLRAQMFAVA 63
           WQA V PL LTSLMY+GSM LK LLLL SW    N+   LS    K  L      + A++
Sbjct: 259 WQAVVLPLCLTSLMYSGSMFLKCLLLLASWRQHTNSGAALSFDSCKFALQRFLDWLSAIS 318

Query: 64  SNILAWRNFVVAPLTEELVFRACMIPLLLCGGFKINTIIFLCPVFFSLAHLNHLMEIYSA 123
           SNIL WRN+VVAPLTEELVFRACMIPLLLCGG K  +II LCP+FFSLAHLNH +EIY+ 
Sbjct: 319 SNILVWRNYVVAPLTEELVFRACMIPLLLCGGLKTYSIILLCPIFFSLAHLNHFLEIYAK 378

Query: 124 QNFSLLKASMIVGLQLGYTVVFGWYASFLFIRTGHLAAPLIAHIFCNYMGLPVLFARNRG 183
           QN+ ++KA+M++GLQLGYTVVFG YASFLF+RTGHL APL+ HI+CN+MGLPVL+++  G
Sbjct: 379 QNYRIVKAAMVIGLQLGYTVVFGSYASFLFVRTGHLLAPLVVHIYCNFMGLPVLYSQRSG 438

Query: 184 LVSVAFVAGMVAFLWLLFPITRPDLYNDRTNNCRCLHGYCSWN 226
           +VSV F+ G + FLWLLFP+T P+LYNDR +NC C   YC+W 
Sbjct: 439 IVSVTFIIGFLGFLWLLFPMTGPELYNDRIDNCSCWQRYCTWR 481

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|79594437|ref|NP_850262.2| CAAX prenyl protease 2 [Arabidopsis thaliana] gi|332278181|sp|Q8GW19.2|FACE2_ARATH RecName: Full=CAAX prenyl protease 2; AltName: Full=Farnesylated proteins-converting enzyme 2; Short=AtFACE-2; AltName: Full=Prenyl protein-specific endoprotease 2; AltName: Full=Protein RAS-CONVERTING ENZYME 1; Short=AtRCE1 gi|39837445|emb|CAD59227.1| farnesylated-proteins converting enzyme-2 [Arabidopsis thaliana] gi|330254136|gb|AEC09230.1| CAAX prenyl protease 2 [Arabidopsis thaliana]

 Score =  295 bits (755), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 145/223 (65%), Positives = 170/223 (76%), Gaps = 2/223 (0%)

Query: 4   WQAAVFPLFLTSLMYAGSMVLKSLLLLNSWTTDMNNSGGLSLGCIKIVLWSLRAQMFAVA 63
           WQ  V+PL LTSL+YAGS+VLK   LL SW    N  G  S   I+    ++ A +   A
Sbjct: 91  WQGVVYPLLLTSLVYAGSLVLKLFTLLESWKE--NGGGCSSFNYIRSFFQTIPASVLTSA 148

Query: 64  SNILAWRNFVVAPLTEELVFRACMIPLLLCGGFKINTIIFLCPVFFSLAHLNHLMEIYSA 123
           SN+  WRNF+VAP+TEELVFR+CMIPLLLC GF+INT IFLCPV FSLAHLNH  E+Y  
Sbjct: 149 SNVSVWRNFIVAPVTEELVFRSCMIPLLLCAGFRINTAIFLCPVLFSLAHLNHFREMYIR 208

Query: 124 QNFSLLKASMIVGLQLGYTVVFGWYASFLFIRTGHLAAPLIAHIFCNYMGLPVLFARNRG 183
            N S L+AS+IVGLQLGYTV+FG YASFLFIRTGHLAAPL AHIFCNYMGLPVL+A  +G
Sbjct: 209 HNRSYLRASLIVGLQLGYTVIFGAYASFLFIRTGHLAAPLFAHIFCNYMGLPVLYANGKG 268

Query: 184 LVSVAFVAGMVAFLWLLFPITRPDLYNDRTNNCRCLHGYCSWN 226
           LVS AF+ G+V F+ LLFP+T+P +YND TN+C C  GYC WN
Sbjct: 269 LVSAAFLGGVVGFVLLLFPLTKPLMYNDSTNDCPCWLGYCLWN 311

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|26453264|dbj|BAC43705.1| unknown protein [Arabidopsis thaliana] gi|28950887|gb|AAO63367.1| At2g36305 [Arabidopsis thaliana]

 Score =  291 bits (745), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 144/223 (64%), Positives = 169/223 (75%), Gaps = 2/223 (0%)

Query: 4   WQAAVFPLFLTSLMYAGSMVLKSLLLLNSWTTDMNNSGGLSLGCIKIVLWSLRAQMFAVA 63
           WQ  V+PL LTSL+YAGS+VLK   LL SW    N  G  S   I+    ++ A +   A
Sbjct: 91  WQGVVYPLLLTSLVYAGSLVLKLFTLLESWKE--NGGGCSSFNYIRSFFQTIPASVLTSA 148

Query: 64  SNILAWRNFVVAPLTEELVFRACMIPLLLCGGFKINTIIFLCPVFFSLAHLNHLMEIYSA 123
           SN+  WRNF+VAP+TEELVFR+CMIPLLLC GF+INT IFLCPV FSLAHLNH  E+Y  
Sbjct: 149 SNVSVWRNFIVAPVTEELVFRSCMIPLLLCAGFRINTAIFLCPVLFSLAHLNHFREMYIR 208

Query: 124 QNFSLLKASMIVGLQLGYTVVFGWYASFLFIRTGHLAAPLIAHIFCNYMGLPVLFARNRG 183
            N S L+AS+IVGLQLGYTV+FG YASFLFIRTGHLAAPL AHIFCN MGLPVL+A  +G
Sbjct: 209 HNRSYLRASLIVGLQLGYTVIFGAYASFLFIRTGHLAAPLFAHIFCNCMGLPVLYANGKG 268

Query: 184 LVSVAFVAGMVAFLWLLFPITRPDLYNDRTNNCRCLHGYCSWN 226
           LVS AF+ G+V F+ LLFP+T+P +YND TN+C C  GYC WN
Sbjct: 269 LVSAAFLGGVVGFVLLLFPLTKPLMYNDSTNDCPCWLGYCLWN 311

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297823435|ref|XP_002879600.1| prenyl-dependent CAAX protease [Arabidopsis lyrata subsp. lyrata] gi|297325439|gb|EFH55859.1| prenyl-dependent CAAX protease [Arabidopsis lyrata subsp. lyrata]

 Score =  272 bits (695), Expect = 9e-71,   Method: Compositional matrix adjust.
 Identities = 144/223 (64%), Positives = 171/223 (76%), Gaps = 2/223 (0%)

Query: 4   WQAAVFPLFLTSLMYAGSMVLKSLLLLNSWTTDMNNSGGLSLGCIKIVLWSLRAQMFAVA 63
           WQ  V PL LTSL+YAGS+VLK LLLL   +   N  G  S   I+    ++ A +   A
Sbjct: 91  WQGVVCPLLLTSLVYAGSLVLKLLLLLE--SLKENGGGCSSFDYIRSFFQTIPASVLTGA 148

Query: 64  SNILAWRNFVVAPLTEELVFRACMIPLLLCGGFKINTIIFLCPVFFSLAHLNHLMEIYSA 123
           SN+  WRNF+VAP+TEELVFRACMIPLLLC GF+I T IFLCPV FSLAHL+H  E+Y  
Sbjct: 149 SNVSVWRNFIVAPVTEELVFRACMIPLLLCAGFRIYTAIFLCPVLFSLAHLSHFREMYIR 208

Query: 124 QNFSLLKASMIVGLQLGYTVVFGWYASFLFIRTGHLAAPLIAHIFCNYMGLPVLFARNRG 183
            N S L+AS+IVGLQLGYTV+FG YASFLFIRTGHLAAPL AHIFCNYMGLPVL+A+ +G
Sbjct: 209 HNRSYLRASLIVGLQLGYTVIFGAYASFLFIRTGHLAAPLFAHIFCNYMGLPVLYAQGKG 268

Query: 184 LVSVAFVAGMVAFLWLLFPITRPDLYNDRTNNCRCLHGYCSWN 226
           LVS AF+ G+V F+ LLFP+T+P +Y+DRTN+C C  GYC WN
Sbjct: 269 LVSAAFLGGVVGFVSLLFPLTKPLMYSDRTNDCPCWLGYCLWN 311

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224090659|ref|XP_002309046.1| predicted protein [Populus trichocarpa] gi|222855022|gb|EEE92569.1| predicted protein [Populus trichocarpa]

 Score =  270 bits (689), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 130/181 (71%), Positives = 150/181 (82%)

Query: 4   WQAAVFPLFLTSLMYAGSMVLKSLLLLNSWTTDMNNSGGLSLGCIKIVLWSLRAQMFAVA 63
           WQA VFPL LT LMYAGS+V KSLLL++SW   M+   G+SL CIK +L +  A + + A
Sbjct: 90  WQAVVFPLSLTCLMYAGSLVFKSLLLVDSWKEHMHQGEGISLNCIKDILQNFLAGLSSTA 149

Query: 64  SNILAWRNFVVAPLTEELVFRACMIPLLLCGGFKINTIIFLCPVFFSLAHLNHLMEIYSA 123
           SN+LAWRN+VVAPLTEELVFRACMIPLLLCGGF+I  +I LCP+ FSLAHLNH MEIY  
Sbjct: 150 SNVLAWRNYVVAPLTEELVFRACMIPLLLCGGFEIYVVILLCPILFSLAHLNHWMEIYGR 209

Query: 124 QNFSLLKASMIVGLQLGYTVVFGWYASFLFIRTGHLAAPLIAHIFCNYMGLPVLFARNRG 183
           QN+SLLKA M+VGLQLGYTV+FG YASFLFIRTGHL APL+AHIFCN+MGLPVLF R  G
Sbjct: 210 QNYSLLKAFMVVGLQLGYTVIFGSYASFLFIRTGHLVAPLVAHIFCNFMGLPVLFVRRTG 269

Query: 184 L 184
           +
Sbjct: 270 M 270

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|242087607|ref|XP_002439636.1| hypothetical protein SORBIDRAFT_09g017520 [Sorghum bicolor] gi|241944921|gb|EES18066.1| hypothetical protein SORBIDRAFT_09g017520 [Sorghum bicolor]

 Score =  252 bits (644), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 125/222 (56%), Positives = 163/222 (73%), Gaps = 10/222 (4%)

Query: 5   QAAVFPLFLTSLMYAGSMVLKSLLLLNSWTTDMNNSGGLSLGCIKIVLWSLRAQMFAVAS 64
           QA V PL LTSL+YAGS V +   L +SW     +   + +GC +     L   + A  +
Sbjct: 100 QAVVIPLLLTSLVYAGSFVTRLWFLASSW----GSGDEVEIGCAQ----RLAQWIQAAVA 151

Query: 65  NILAWRNFVVAPLTEELVFRACMIPLLLCGGFKINTIIFLCPVFFSLAHLNHLMEIYSAQ 124
           +++ WRN+VVAP TEELVFRACMIPLLLCGGFK++TIIFL PVFFSLAHLNHL E++  Q
Sbjct: 152 DVMVWRNYVVAPFTEELVFRACMIPLLLCGGFKMSTIIFLSPVFFSLAHLNHLFELHQ-Q 210

Query: 125 NFSLLKASMIVGLQLGYTVVFGWYASFLFIRTGHLAAPLIAHIFCNYMGLPVLFARNRGL 184
             + +++ +IVG+QLGYTV+FGWYA+FLFIRTG+L  P++AH+FCN MGLPV F+  R  
Sbjct: 211 GCNFMRSLLIVGVQLGYTVIFGWYAAFLFIRTGNLLCPIVAHVFCNMMGLPV-FSSPRTK 269

Query: 185 VSVAFVAGMVAFLWLLFPITRPDLYNDRTNNCRCLHGYCSWN 226
            SVAF+AG+++F WLLFP T P+LYN   + C C HG+C+W 
Sbjct: 270 ASVAFMAGLISFFWLLFPATSPELYNSSFDRCNCWHGFCNWK 311

Source: Sorghum bicolor

Species: Sorghum bicolor

Genus: Sorghum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|212723560|ref|NP_001131597.1| uncharacterized protein LOC100192945 [Zea mays] gi|194691990|gb|ACF80079.1| unknown [Zea mays] gi|413945050|gb|AFW77699.1| CAAX prenyl protease 2 [Zea mays]

 Score =  249 bits (637), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 124/223 (55%), Positives = 160/223 (71%), Gaps = 10/223 (4%)

Query: 5   QAAVFPLFLTSLMYAGSMVLKSLLLLNSWTTDMNNSGGLSLGCIKIVLWSLRAQMFAVAS 64
           QA   PL LTSL+YAGS V +  LL++SW         + +GC +     L   + A  +
Sbjct: 100 QAVAIPLLLTSLVYAGSFVARVWLLVSSW----GGGDEVEIGCAQ----RLAQWIQAAVA 151

Query: 65  NILAWRNFVVAPLTEELVFRACMIPLLLCGGFKINTIIFLCPVFFSLAHLNHLMEIYSAQ 124
           +++ WRN+VVAP TEELVFRACMIPLLLCGGFK++TIIFL P+FFSLAHLNH  E++  Q
Sbjct: 152 DVMVWRNYVVAPFTEELVFRACMIPLLLCGGFKMSTIIFLSPIFFSLAHLNHFFELHQ-Q 210

Query: 125 NFSLLKASMIVGLQLGYTVVFGWYASFLFIRTGHLAAPLIAHIFCNYMGLPVLFA-RNRG 183
             + ++A +IVG+QLGYTV+FGWYA+FL IRTG+L  P+IAH+FCN MGLPV  + R +G
Sbjct: 211 GCNFMRALLIVGVQLGYTVIFGWYATFLLIRTGNLLCPIIAHVFCNMMGLPVFSSPRTKG 270

Query: 184 LVSVAFVAGMVAFLWLLFPITRPDLYNDRTNNCRCLHGYCSWN 226
              VAF+AG +AF WLLFP T P+LYN   + C C HG+C+W 
Sbjct: 271 AALVAFLAGSIAFFWLLFPATSPELYNSSFDRCSCWHGFCNWK 313

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	226
TAIR|locus:504956028	311	FACE2 "farnesylated protein-co	0.977	0.710	0.650	9e-77
ZFIN|ZDB-GENE-041008-116	321	rce1a "RCE1 homolog, prenyl pr	0.862	0.607	0.387	6e-32
UNIPROTKB|F1RUV3	329	RCE1 "Uncharacterized protein"	0.827	0.568	0.402	2e-31
UNIPROTKB|J9P1S2	488	RCE1 "Uncharacterized protein"	0.827	0.383	0.398	4.2e-31
UNIPROTKB|Q9Y256	329	RCE1 "CAAX prenyl protease 2"	0.827	0.568	0.398	4.2e-31
MGI|MGI:1336895	329	Rce1 "RCE1 homolog, prenyl pro	0.831	0.571	0.390	8.8e-31
FB|FBgn0029121	302	Sras "severas" [Drosophila mel	0.628	0.470	0.424	1.3e-30
UNIPROTKB|G3V8J7	329	Rce1 "Ras and a-factor-convert	0.831	0.571	0.390	1.4e-30
UNIPROTKB|E9PKA7	206	RCE1 "CAAX prenyl protease 2"	0.619	0.679	0.46	1e-29
ZFIN|ZDB-GENE-091204-277	305	rce1b "RCE1 homolog, prenyl pr	0.831	0.616	0.380	3.9e-28

TAIR|locus:504956028 FACE2 "farnesylated protein-converting enzyme 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 773 (277.2 bits), Expect = 9.0e-77, P = 9.0e-77
 Identities = 145/223 (65%), Positives = 170/223 (76%)

Query:     4 WQAAVFPLFLTSLMYAGSMVLKSLLLLNSWTTDMNNSGGLSLGCIKIVLWSLRAQMFAVA 63
             WQ  V+PL LTSL+YAGS+VLK   LL SW    N  G  S   I+    ++ A +   A
Sbjct:    91 WQGVVYPLLLTSLVYAGSLVLKLFTLLESWKE--NGGGCSSFNYIRSFFQTIPASVLTSA 148

Query:    64 SNILAWRNFVVAPLTEELVFRACMIPLLLCGGFKINTIIFLCPVFFSLAHLNHLMEIYSA 123
             SN+  WRNF+VAP+TEELVFR+CMIPLLLC GF+INT IFLCPV FSLAHLNH  E+Y  
Sbjct:   149 SNVSVWRNFIVAPVTEELVFRSCMIPLLLCAGFRINTAIFLCPVLFSLAHLNHFREMYIR 208

Query:   124 QNFSLLKASMIVGLQLGYTVVFGWYASFLFIRTGHLAAPLIAHIFCNYMGLPVLFARNRG 183
              N S L+AS+IVGLQLGYTV+FG YASFLFIRTGHLAAPL AHIFCNYMGLPVL+A  +G
Sbjct:   209 HNRSYLRASLIVGLQLGYTVIFGAYASFLFIRTGHLAAPLFAHIFCNYMGLPVLYANGKG 268

Query:   184 LVSVAFVAGMVAFLWLLFPITRPDLYNDRTNNCRCLHGYCSWN 226
             LVS AF+ G+V F+ LLFP+T+P +YND TN+C C  GYC WN
Sbjct:   269 LVSAAFLGGVVGFVLLLFPLTKPLMYNDSTNDCPCWLGYCLWN 311

GO:0005576 "extracellular region" evidence=ISM

GO:0006508 "proteolysis" evidence=ISS

GO:0016020 "membrane" evidence=IEA

GO:0004175 "endopeptidase activity" evidence=IMP;IDA

GO:0016485 "protein processing" evidence=IDA

GO:0080120 "CAAX-box protein maturation" evidence=IGI

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0034613 "cellular protein localization" evidence=IGI

ZFIN|ZDB-GENE-041008-116 rce1a "RCE1 homolog, prenyl protein peptidase (S. cerevisiae) a" [Danio rerio (taxid:7955)]

 Score = 350 (128.3 bits), Expect = 6.0e-32, P = 6.0e-32
 Identities = 84/217 (38%), Positives = 120/217 (55%)

Query:     6 AAVFPLFLTSLMYAGSMVLKSLLLLNSWTTDMNNSGGLSLGCIKIVLWSLRAQMFAVASN 65
             A + PL LT +++ G ++   L +   W        G+ +  +    WSL         +
Sbjct:   110 AIILPLLLTMVLFLGPLI--QLAMDCPW----GFIDGMKV-VVDPCFWSL-------CLS 155

Query:    66 ILAW-RNFVVAPLTEELVFRACMIPLLL-CGGFKINTIIFLCPVFFSLAHLNHLMEIYSA 123
              + W RN VVAPLTEELVFRACM+P+L+ C G   +T IF CP+FF +AH +H++E+   
Sbjct:   156 DMRWLRNQVVAPLTEELVFRACMLPMLVPCAG--PSTAIFTCPLFFGVAHFHHVIELLRF 213

Query:   124 QNFSLLKASMIVGLQLGYTVVFGWYASFLFIRTGHLAAPLIAHIFCNYMGLPVL---FAR 180
             +  ++    +    Q  YT VFG Y +F+FIRTGHL  P++ H FCNYMG P L      
Sbjct:   214 RQGTVSGIFLSAVFQFSYTAVFGAYTAFIFIRTGHLVGPVLCHSFCNYMGFPALNTALDH 273

Query:   181 NRGLVSVAFVA-GMVAFLWLLFPITRPDLYNDRTNNC 216
             ++ L  + F   G+V FL L+FP+T P  Y   T  C
Sbjct:   274 SQRLTILFFYGLGVVLFLLLIFPMTDPHFYGLPTPVC 310

GO:0016020 "membrane" evidence=IEA

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|F1RUV3 RCE1 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 345 (126.5 bits), Expect = 2.0e-31, P = 2.0e-31
 Identities = 85/211 (40%), Positives = 120/211 (56%)

Query:     6 AAVFPLFLTSLMYAGSMVLKSLLLLNSWTTDMNNSGGLSLGCIKIVLWSLRAQMFAVASN 65
             AA+ PL LT +++ G ++  S          M+ S  L+ G +K+VL     + +A    
Sbjct:   115 AALLPLLLTMILFLGPLMQLS----------MDCSCDLADG-LKVVL---APRSWARCLT 160

Query:    66 ILAW-RNFVVAPLTEELVFRACMIPLLL-CGGFKINTIIFLCPVFFSLAHLNHLMEIYSA 123
              + W RN V+APLTEELVFRACM+P+L  C G  +   +F CP+FF +AH +H+ E    
Sbjct:   161 DMRWLRNQVIAPLTEELVFRACMLPMLAPCTG--LGPAVFTCPLFFGVAHFHHIFEQLRF 218

Query:   124 QNFSLLKASMIVGLQLGYTVVFGWYASFLFIRTGHLAAPLIAHIFCNYMGLPVLFA---- 179
             +  S+    +    Q  YT VFG Y +FLFIRTGHL  P++ H FCNYMG P + A    
Sbjct:   219 RQSSVGSIFLSAAFQFSYTAVFGAYTAFLFIRTGHLIGPVLCHSFCNYMGFPAVCAALEH 278

Query:   180 -RNRGLVSVAFVAGMVAFLWLLFPITRPDLY 209
              + R L++  +  G+  FL LL P+T P LY
Sbjct:   279 PQRRPLLA-GYALGVGLFLLLLQPLTDPKLY 308

GO:0016020 "membrane" evidence=IEA

UNIPROTKB|J9P1S2 RCE1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 342 (125.4 bits), Expect = 4.2e-31, P = 4.2e-31
 Identities = 84/211 (39%), Positives = 119/211 (56%)

Query:     6 AAVFPLFLTSLMYAGSMVLKSLLLLNSWTTDMNNSGGLSLGCIKIVLWSLRAQMFAVASN 65
             AA+ PL LT +++ G ++  S+        D+  + GL     K+VL     + +A    
Sbjct:   274 AALLPLLLTMILFLGPLMQLSM----DCPCDL--ADGL-----KVVL---APRSWARCLT 319

Query:    66 ILAW-RNFVVAPLTEELVFRACMIPLLL-CGGFKINTIIFLCPVFFSLAHLNHLMEIYSA 123
              + W RN V+APLTEELVFRACM+P+L  C G  +   +F CP+FF +AH +H+ E    
Sbjct:   320 DMRWLRNQVIAPLTEELVFRACMLPMLAPCTG--LGPAVFTCPLFFGVAHFHHIFEQLRF 377

Query:   124 QNFSLLKASMIVGLQLGYTVVFGWYASFLFIRTGHLAAPLIAHIFCNYMGLPVLFA---- 179
             +  S+    +    Q  YT VFG Y +FLFIRTGHL  P++ H FCNYMG P + A    
Sbjct:   378 RQSSVGSIFLSAAFQFSYTAVFGAYTAFLFIRTGHLIGPVLCHSFCNYMGFPAVCAALEH 437

Query:   180 -RNRGLVSVAFVAGMVAFLWLLFPITRPDLY 209
              + R L++  +  G+  FL LL P+T P LY
Sbjct:   438 PQRRPLLA-GYALGVGLFLLLLQPLTDPKLY 467

GO:0016020 "membrane" evidence=IEA

UNIPROTKB|Q9Y256 RCE1 "CAAX prenyl protease 2" [Homo sapiens (taxid:9606)]

 Score = 342 (125.4 bits), Expect = 4.2e-31, P = 4.2e-31
 Identities = 84/211 (39%), Positives = 120/211 (56%)

Query:     6 AAVFPLFLTSLMYAGSMVLKSLLLLNSWTTDMNNSGGLSLGCIKIVLWSLRAQMFAVASN 65
             AA+ PL LT +++ G ++  S+        D+  + GL     K+VL     + +A    
Sbjct:   115 AALLPLLLTMILFLGPLMQLSM----DCPCDL--ADGL-----KVVL---APRSWARCLT 160

Query:    66 ILAW-RNFVVAPLTEELVFRACMIPLLL-CGGFKINTIIFLCPVFFSLAHLNHLMEIYSA 123
              + W RN V+APLTEELVFRACM+P+L  C G  +   +F CP+FF +AH +H++E    
Sbjct:   161 DMRWLRNQVIAPLTEELVFRACMLPMLAPCMG--LGPAVFTCPLFFGVAHFHHIIEQLRF 218

Query:   124 QNFSLLKASMIVGLQLGYTVVFGWYASFLFIRTGHLAAPLIAHIFCNYMGLPVLFA---- 179
             +  S+    +    Q  YT VFG Y +FLFIRTGHL  P++ H FCNYMG P + A    
Sbjct:   219 RQSSVGNIFLSAAFQFSYTAVFGAYTAFLFIRTGHLIGPVLCHSFCNYMGFPAVCAALEH 278

Query:   180 -RNRGLVSVAFVAGMVAFLWLLFPITRPDLY 209
              + R L++  +  G+  FL LL P+T P LY
Sbjct:   279 PQRRPLLA-GYALGVGLFLLLLQPLTDPKLY 308

GO:0005789 "endoplasmic reticulum membrane" evidence=IDA

GO:0071586 "CAAX-box protein processing" evidence=IMP

GO:0004197 "cysteine-type endopeptidase activity" evidence=IDA

GO:0005887 "integral to plasma membrane" evidence=TAS

GO:0006508 "proteolysis" evidence=TAS

GO:0004222 "metalloendopeptidase activity" evidence=TAS

MGI|MGI:1336895 Rce1 "RCE1 homolog, prenyl protein peptidase (S. cerevisiae)" [Mus musculus (taxid:10090)]

 Score = 339 (124.4 bits), Expect = 8.8e-31, P = 8.8e-31
 Identities = 82/210 (39%), Positives = 117/210 (55%)

Query:     6 AAVFPLFLTSLMYAGSMVLKSLLLLNSWTTDMNNSGGLSLGCIKIVLWSLRAQMFAVASN 65
             AA+ PL LT +++ G ++  S+        D+ +  GL     K+VL     + +A    
Sbjct:   115 AALLPLLLTMILFLGPLMQLSM----DCPCDLTD--GL-----KVVL---APRSWARCLT 160

Query:    66 ILAW-RNFVVAPLTEELVFRACMIPLLL-CGGFKINTIIFLCPVFFSLAHLNHLMEIYSA 123
              + W RN V+APLTEELVFRACM+P+L  C G  +   +F CP+FF +AH +H++E    
Sbjct:   161 DMRWLRNQVIAPLTEELVFRACMLPMLAPCTG--LGPAVFTCPLFFGVAHFHHIIEQLRF 218

Query:   124 QNFSLLKASMIVGLQLGYTVVFGWYASFLFIRTGHLAAPLIAHIFCNYMGLPVLFAR--- 180
             +  S+    +    Q  YT VFG Y +FLFIRTGHL  P++ H FCNYMG P + A    
Sbjct:   219 RQSSVGSIFVSAAFQFSYTAVFGAYTAFLFIRTGHLIGPVLCHSFCNYMGFPAVCAALEH 278

Query:   181 -NRGLVSVAFVAGMVAFLWLLFPITRPDLY 209
               +  +   +  G+  FL LL P+T P LY
Sbjct:   279 PQKWPLLAGYALGVGLFLLLLQPLTDPKLY 308

GO:0004197 "cysteine-type endopeptidase activity" evidence=ISO

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0005789 "endoplasmic reticulum membrane" evidence=ISO

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016787 "hydrolase activity" evidence=IEA

GO:0071586 "CAAX-box protein processing" evidence=ISO

FB|FBgn0029121 Sras "severas" [Drosophila melanogaster (taxid:7227)]

 Score = 304 (112.1 bits), Expect = 1.3e-30, Sum P(2) = 1.3e-30
 Identities = 65/153 (42%), Positives = 103/153 (67%)

Query:    67 LAW-RNFVVAPLTEELVFRACMIPLLLCGGFKINTIIFLCPVFFSLAHLNHLMEIYSAQN 125
             + W RN V+APL+EE VFRACM+PL+L   F     +F+ P+FF +AHL+H+ E  S   
Sbjct:   147 IIWVRNHVIAPLSEEFVFRACMMPLIL-QSFSPLVAVFITPLFFGVAHLHHIAERLSLG- 204

Query:   126 FSLLKASMIVGL-QLGYTVVFGWYASFLFIRTGHLAAPLIAHIFCNYMGLPVL---FARN 181
                L  ++++GL Q  YT +FG+Y++FLF RTGH+ AP++ H FCN+MGLP L   + ++
Sbjct:   205 -VELSTALLIGLFQFIYTTLFGFYSAFLFARTGHVMAPILVHAFCNHMGLPDLQDLWQQD 263

Query:   182 --RGLVSVA-FVAGMVAFLWLLFPITRPDLYND 211
               R +V++  ++AG V +++L+   T P +Y++
Sbjct:   264 LWRRVVAIILYLAGFVGWMFLVPLATDPSIYDN 296

GO:0004222 "metalloendopeptidase activity" evidence=ISS;NAS

GO:0030176 "integral to endoplasmic reticulum membrane" evidence=NAS

GO:0006508 "proteolysis" evidence=NAS

GO:0016020 "membrane" evidence=IEA

UNIPROTKB|G3V8J7 Rce1 "Ras and a-factor-converting enzyme 1 homolog (S. cerevisiae), isoform CRA_b" [Rattus norvegicus (taxid:10116)]

 Score = 337 (123.7 bits), Expect = 1.4e-30, P = 1.4e-30
 Identities = 82/210 (39%), Positives = 116/210 (55%)

Query:     6 AAVFPLFLTSLMYAGSMVLKSLLLLNSWTTDMNNSGGLSLGCIKIVLWSLRAQMFAVASN 65
             AA+ PL LT +++ G +    + L      D+ +  GL     K+VL     + +A    
Sbjct:   115 AALLPLLLTMILFLGPL----MQLCMDCPCDLTD--GL-----KVVL---APRSWARRLT 160

Query:    66 ILAW-RNFVVAPLTEELVFRACMIPLLL-CGGFKINTIIFLCPVFFSLAHLNHLMEIYSA 123
              + W RN V+APLTEELVFRACM+P+L  C G  +   +F CP+FF +AH +H++E    
Sbjct:   161 DMRWLRNQVIAPLTEELVFRACMLPMLAPCTG--LGPAVFTCPLFFGVAHFHHIIEQLRF 218

Query:   124 QNFSLLKASMIVGLQLGYTVVFGWYASFLFIRTGHLAAPLIAHIFCNYMGLPVLFAR--- 180
             +  S+    +    Q  YT VFG Y +FLFIRTGHL  P++ H FCNYMG P + A    
Sbjct:   219 RQSSVGSIFLSAAFQFSYTAVFGAYTAFLFIRTGHLIGPVLCHSFCNYMGFPAVCAALEH 278

Query:   181 -NRGLVSVAFVAGMVAFLWLLFPITRPDLY 209
               +  +   +  G+  FL LL P+T P LY
Sbjct:   279 PQKWPLLAGYALGVGLFLLLLQPLTDPKLY 308

GO:0016020 "membrane" evidence=IEA

UNIPROTKB|E9PKA7 RCE1 "CAAX prenyl protease 2" [Homo sapiens (taxid:9606)]

 Score = 329 (120.9 bits), Expect = 1.0e-29, P = 1.0e-29
 Identities = 69/150 (46%), Positives = 93/150 (62%)

Query:    67 LAW-RNFVVAPLTEELVFRACMIPLLL-CGGFKINTIIFLCPVFFSLAHLNHLMEIYSAQ 124
             + W RN V+APLTEELVFRACM+P+L  C G  +   +F CP+FF +AH +H++E    +
Sbjct:    39 MRWLRNQVIAPLTEELVFRACMLPMLAPCMG--LGPAVFTCPLFFGVAHFHHIIEQLRFR 96

Query:   125 NFSLLKASMIVGLQLGYTVVFGWYASFLFIRTGHLAAPLIAHIFCNYMGLPVLFA----- 179
               S+    +    Q  YT VFG Y +FLFIRTGHL  P++ H FCNYMG P + A     
Sbjct:    97 QSSVGNIFLSAAFQFSYTAVFGAYTAFLFIRTGHLIGPVLCHSFCNYMGFPAVCAALEHP 156

Query:   180 RNRGLVSVAFVAGMVAFLWLLFPITRPDLY 209
             + R L++  +  G+  FL LL P+T P LY
Sbjct:   157 QRRPLLA-GYALGVGLFLLLLQPLTDPKLY 185

GO:0016020 "membrane" evidence=IEA

ZFIN|ZDB-GENE-091204-277 rce1b "RCE1 homolog, prenyl protein peptidase (S. cerevisiae) b" [Danio rerio (taxid:7955)]

 Score = 314 (115.6 bits), Expect = 3.9e-28, P = 3.9e-28
 Identities = 80/210 (38%), Positives = 113/210 (53%)

Query:     6 AAVFPLFLTSLMYAGSMVLKSLLLLNSWTTDMNNSGGLSLGCIKIVLWSLRAQMFAVASN 65
             AAV PL LT +++ G +   ++        D+    GL+  C     WS + +       
Sbjct:    95 AAVLPLTLTMVLFLGPLTQLAVESPRGLFHDVK--AGLN--CQS---WSKQVKD------ 141

Query:    66 ILAW-RNFVVAPLTEELVFRACMIPLLL-CGGFKINTIIFLCPVFFSLAHLNHLMEIYSA 123
              L W RN VVAPLTEE VFRAC+IP+L+ C G    + IF+ P+FF +AH +H++E    
Sbjct:   142 -LKWLRNHVVAPLTEEFVFRACIIPMLVPCTG--PTSAIFISPLFFGVAHFHHIIEQLRF 198

Query:   124 QNFSLLKASMIVGLQLGYTVVFGWYASFLFIRTGHLAAPLIAHIFCNYMGLP----VLFA 179
                ++    +    Q  YT VFG Y +F+FIRTGHL  P++ H FCN MG P    VL  
Sbjct:   199 GQDTVFDILICAAFQFTYTSVFGVYTAFIFIRTGHLVGPVLCHSFCNRMGFPAIGSVLEH 258

Query:   180 RNRGLVSVAFVAGMVAFLWLLFPITRPDLY 209
               + L+ + +  G++ F  LLFP T P  Y
Sbjct:   259 PQKSLILLFYQLGVLLFFILLFPFTDPTFY 288

GO:0016020 "membrane" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q8GW19	FACE2_ARATH	3, ., 4, ., 2, 2, ., -	0.6502	0.9778	0.7106	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	3.4.22	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	GSVIVG00021630001	SubName- Full=Chromosome chr8 scaffold_23, whole genome shotgun sequence; (316 aa)
		(Vitis vinifera)
Predicted Functional Partners:
	GSVIVG00026916001	SubName- Full=Chromosome chr15 scaffold_40, whole genome shotgun sequence; (424 aa)					•		•		0.505

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	226
pfam02517	93	pfam02517, Abi, CAAX protease self-immunity	4e-08

>gnl|CDD|217080 pfam02517, Abi, CAAX protease self-immunity

 Score = 49.1 bits (118), Expect = 4e-08
 Identities = 26/107 (24%), Positives = 43/107 (40%), Gaps = 19/107 (17%)

Query: 66  ILAWRNFVVAPLTEELVFRACMIPLLLCGGFKINTIIFLCPVFFSLAHLNHLMEIYSAQN 125
           +L     ++AP+ EEL+FR  ++P L    F     I +  + F L HL +         
Sbjct: 6   LLLLLLALLAPIGEELLFRGFLLPRLR-KRFWPLLAILISSLLFGLLHLPNGP------- 57

Query: 126 FSLLKASMIVGLQLGYTVVFGWYASFLFIRTGHLAAPLIAHIFCNYM 172
                      L      + G    +L++RTG L A ++ H   N +
Sbjct: 58  -----------LAFLSAFLLGLVLGWLYLRTGSLWAAILLHALNNLL 93

Members of this family are probably proteases (after a isoprenyl group is attached to the Cys residue in the C-terminal CAAX motif of a protein to attach it to the membrane, the AAX tripeptide being removed by one of the CAAX prenyl proteases). The family contains the CAAX prenyl protease. The proteins contain a highly conserved Glu-Glu motif at the amino end of the alignment. The alignment also contains two histidine residues that may be involved in zinc binding. While they are involved in membrane anchoring of proteins in eukaryotes, little is known about their function in prokaryotes. In some known bacteriocin loci, Abi genes have been found downstream of bacteriocin structural genes where they are probably involved in self-immunity. Investigation of the bacteriocin-like loci in the Gram positive bacteria locus from Lactobacillus sakei 23K confirmed that the bacteriocin-like genes (sak23Kalphabeta) exhibited antimicrobial activity when expressed in a heterologous host and that the associated Abi gene (sak23Ki) conferred immunity against the cognate bacteriocin. Interestingly, the immunity genes from three similar systems conferred a high degree of cross-immunity against each other's bacteriocins, suggesting the recognition of a common receptor. Site-directed mutagenesis demonstrated that the conserved motifs constituting the putative proteolytic active site of the Abi proteins are essential for the immunity function of Sak23Ki - thus a new concept in self-immunity. Length = 93

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	226
KOG4130	291	consensus Prenyl protein protease [Posttranslation	100.0
PF02517	91	Abi: CAAX protease self-immunity; InterPro: IPR003	99.74
TIGR03008	222	pepcterm_CAAX CAAX prenyl protease-related protein	99.59
COG1266	226	Predicted metal-dependent membrane protease [Gener	99.56
COG4449	827	Predicted protease of the Abi (CAAX) family [Gener	96.68
PF13367	191	PrsW-protease: Protease prsW family	86.51

>KOG4130 consensus Prenyl protein protease [Posttranslational modification, protein turnover, chaperones]

Probab=100.00  E-value=6.7e-48  Score=335.87  Aligned_cols=192  Identities=36%  Similarity=0.640  Sum_probs=169.6

Q ss_pred             hhHHhHHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCCCCccchhHHhhhHHHHHHHHhhhhHHHhhhhhhhhhHHHHH
Q 027199            3 QWQAAVFPLFLTSLMYAGSMVLKSLLLLNSWTTDMNNSGGLSLGCIKIVLWSLRAQMFAVASNILAWRNFVVAPLTEELV   82 (226)
Q Consensus         3 ~~~a~~~pl~LT~~Lf~Gpl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~rn~IvaPi~EElv   82 (226)
                      +++|++.|+++|+++|+||+++-.+..       +    +.+ +++..+||      ++++.|++||||.|+||++||++
T Consensus        84 ~~~avlk~lllt~tLflGPl~~v~m~~-------~----~~r-~~fil~~~------~~cf~nii~~RN~iiaPLtEElv  145 (291)
T KOG4130|consen   84 FVKAVLKPLLLTLTLFLGPLLDVVMYH-------L----LNR-KSFILEDW------YHCFLNIIWFRNFIIAPLTEELV  145 (291)
T ss_pred             hHHHHHHHHHHHHHHHhhhhhheeeec-------c----ccc-hhccHHHH------HHHHHHHHHHHhhhhccchHHHH
Confidence            689999999999999999999765421       1    111 24557788      88999999999999999999999


Q ss_pred             HHHhhHHHHHcCCCCcchhHHHHHHHHHHhhhhhHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCchHH
Q 027199           83 FRACMIPLLLCGGFKINTIIFLCPVFFSLAHLNHLMEIYSAQNFSLLKASMIVGLQLGYTVVFGWYASFLFIRTGHLAAP  162 (226)
Q Consensus        83 FRg~ll~~l~~~~~~~~~ai~lssllFglaH~~h~~e~~~~~g~~~~~al~~~~~Q~~yt~lfG~~~a~ly~rTgsL~~~  162 (226)
                      ||+||+|..+...++..++++++|++||+||.||++|+...+..+..++++.+.+||.||++||+|.+++|+||||+|+|
T Consensus       146 fracmlp~~l~~~~s~l~avF~~PLfFGvAH~HHiyEqL~~g~~~~~~ilL~t~fQfsYTtlFG~yTaflF~rTghl~~~  225 (291)
T KOG4130|consen  146 FRACMLPTYLNLIQSSLQAVFWQPLFFGVAHAHHIYEQLQEGSMTTVSILLTTCFQFSYTTLFGGYTAFLFVRTGHLWCP  225 (291)
T ss_pred             HHHHHHHHHHHhhhcchhhHHHhhHHHhHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCchHH
Confidence            99999999986668999999999999999999999999865557788899999999999999999999999999999999


Q ss_pred             HHHHHHhhhhhhhhhhh-----cchhH-HHHHHHHHHHHHHHHHhcCCCCccccCC
Q 027199          163 LIAHIFCNYMGLPVLFA-----RNRGL-VSVAFVAGMVAFLWLLFPITRPDLYNDR  212 (226)
Q Consensus       163 il~H~~~N~~Glp~~~~-----~~~~~-~~~~~v~G~v~f~~lL~~lt~~~~y~~~  212 (226)
                      |++|++||.||+|++.+     +++++ ..+.|..|+..|+.++.+.|+|+.|++.
T Consensus       226 iLvHAfCN~MGfP~l~~~~~~~~~rri~a~v~~llgv~~fllllgl~t~~~~~d~l  281 (291)
T KOG4130|consen  226 ILVHAFCNIMGFPNLHFTVVDKKARRISALVSYLLGVYFFLLLLGLITDPDTYDTL  281 (291)
T ss_pred             HHHHHHHhhcCChhHHHHHcCcccchHHHHHHHHHHHHHHHHHhccccCchhhccC
Confidence            99999999999999976     23333 3567999999999999999999999885

>PF02517 Abi: CAAX protease self-immunity; InterPro: IPR003675 Members of this family are probably proteases (after a isoprenyl group is attached to the Cys residue in the C-terminal CAAX motif of a protein to attach it to the membrane, the AAX tripeptide is removed by one of the CAAX prenyl proteases)

Probab=99.74  E-value=1.6e-17  Score=123.58  Aligned_cols=87  Identities=34%  Similarity=0.579  Sum_probs=76.4

Q ss_pred             HHHhhhhhhhhhHHHHHHHHhhHHHHHcCCCCcchhHHHHHHHHHHhhhhhHHHHHHhhhhhHHHHHHHHHHHHHHHHHH
Q 027199           66 ILAWRNFVVAPLTEELVFRACMIPLLLCGGFKINTIIFLCPVFFSLAHLNHLMEIYSAQNFSLLKASMIVGLQLGYTVVF  145 (226)
Q Consensus        66 ~~~~rn~IvaPi~EElvFRg~ll~~l~~~~~~~~~ai~lssllFglaH~~h~~e~~~~~g~~~~~al~~~~~Q~~yt~lf  145 (226)
                      +..+...+++|+.||++|||.+++.+.+ +.++..++++|+++||+.|...                   ..++.+++++
T Consensus         5 ~~~~~~~~~~~~~EEl~fRg~l~~~l~~-~~~~~~a~~is~~~f~~~H~~~-------------------~~~~~~~~~~   64 (91)
T PF02517_consen    5 IFFLVMILIAPIAEELFFRGFLFNRLRR-RFNPWFAILISSLLFALWHLPN-------------------GPQFIYAFLF   64 (91)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcchHHHHHHHHHHHHHHHHhh-------------------hHHHHHHHHH
Confidence            3456788999999999999999999974 4677899999999999999984                   1236788999


Q ss_pred             HHHHHHHHHhhCCchHHHHHHHHhhhh
Q 027199          146 GWYASFLFIRTGHLAAPLIAHIFCNYM  172 (226)
Q Consensus       146 G~~~a~ly~rTgsL~~~il~H~~~N~~  172 (226)
                      |+.++++|.||||+++++++|+.+|.+
T Consensus        65 g~~~~~~~~~t~sl~~~i~~H~~~n~~   91 (91)
T PF02517_consen   65 GLLFGYLYLRTGSLWAAIIAHALWNLV   91 (91)
T ss_pred             HHHHHHHHHHcCChHHHHHHHHHHHcC
Confidence            999999999999999999999999974

The family contains the Q03530 from SWISSPROT CAAX prenyl protease []. The proteins contain a highly conserved Glu-Glu motif at the amino end of the alignment. The alignment also contains two histidine residues that may be involved in zinc binding []. While these proteins are involved in membrane anchoring of proteins in eukaryotes, little is known about their function in prokaryotes. In some known bacteriocin loci, Abi genes have been found downstream of bacteriocin structural genes where they are probably involved in self-immunity. Investigation of the bacteriocin-like loci in the Gram positive bacteria locus from Lactobacillus sakei 23K confirmed that the bacteriocin-like genes (sak23Kalphabeta) exhibited antimicrobial activity when expressed in a heterologous host and that the associated Abi gene (sak23Ki) conferred immunity against the cognate bacteriocin. Interestingly, the immunity genes from three similar systems conferred a high degree of cross-immunity against each other's bacteriocins, suggesting the recognition of a common receptor. Site-directed mutagenesis demonstrated that the conserved motifs constituting the putative proteolytic active site of the Abi proteins are essential for the immunity function of Sak23Ki - thus a new concept in self-immunity []. This family also includes lysostaphin resistance protein A [].; GO: 0016020 membrane

>TIGR03008 pepcterm_CAAX CAAX prenyl protease-related protein

Probab=99.59  E-value=5.9e-15  Score=129.00  Aligned_cols=81  Identities=25%  Similarity=0.367  Sum_probs=67.7

Q ss_pred             hhhhhhhhhHHHHHHHHhhHHHHHcCCC-------CcchhHHHHHHHHHHhhhhhHHHHHHhhhhhHHHHHHHHHHHHHH
Q 027199           69 WRNFVVAPLTEELVFRACMIPLLLCGGF-------KINTIIFLCPVFFSLAHLNHLMEIYSAQNFSLLKASMIVGLQLGY  141 (226)
Q Consensus        69 ~rn~IvaPi~EElvFRg~ll~~l~~~~~-------~~~~ai~lssllFglaH~~h~~e~~~~~g~~~~~al~~~~~Q~~y  141 (226)
                      ....+++|+.||++|||++++.+.++++       ..+.++++||++||+.|..                       ..+
T Consensus       121 ~~~~l~vpi~EElfFRG~l~~~l~~~~f~~~~~~~~~~~a~lisSllFal~H~~-----------------------~~~  177 (222)
T TIGR03008       121 AGATLVVPVMEELFWRSFLLRYLQQSDFESVPGGRFHWPSFLAVTLLFGLEHHL-----------------------IVA  177 (222)
T ss_pred             HHHHhhHHHHHHHHHHHHHHHHHHHhcccccccccccHHHHHHHHHHHHHHHHH-----------------------HHH
Confidence            3457889999999999999999964222       2457899999999999974                       123


Q ss_pred             HHHHHHHHHHHHHhhCCchHHHHHHHHhhhh
Q 027199          142 TVVFGWYASFLFIRTGHLAAPLIAHIFCNYM  172 (226)
Q Consensus       142 t~lfG~~~a~ly~rTgsL~~~il~H~~~N~~  172 (226)
                      +++.|+..+++|.||||++.||++|+.+|..
T Consensus       178 ~~l~Gli~~~l~~~tgsL~~~I~~H~~~N~l  208 (222)
T TIGR03008       178 GLIAGLAYNLLLLRTGSIMACILAHAVTNGL  208 (222)
T ss_pred             HHHHHHHHHHHHHHhCChHHHHHHHHHHHHH
Confidence            5677999999999999999999999999985

The CAAX prenyl protease, in eukaryotes, catalyzes three covalent modifications, including cleavage and acylation, at the C-terminus of certain proteins in a process connected to protein sorting. This family describes a bacterial protein family homologous to one domain of the CAAX-processing enzyme. Members of this protein family are found in genomes that carry a predicted protein sorting system, PEP-CTERM/exosortase, usually in the vicinity of the EpsH homolog that is the hallmark of the system. The function of this protein is unknown, but it may relate to protein motification.

>COG1266 Predicted metal-dependent membrane protease [General function prediction only]

Probab=99.56  E-value=2.1e-14  Score=120.47  Aligned_cols=89  Identities=28%  Similarity=0.456  Sum_probs=76.4

Q ss_pred             HHHhhhhhhhhhHHHHHHHHhhHHHHHcCCCCcchhHHHHHHHHHHhhhhhHHHHHHhhhhhHHHHHHHHHHHHHHHHHH
Q 027199           66 ILAWRNFVVAPLTEELVFRACMIPLLLCGGFKINTIIFLCPVFFSLAHLNHLMEIYSAQNFSLLKASMIVGLQLGYTVVF  145 (226)
Q Consensus        66 ~~~~rn~IvaPi~EElvFRg~ll~~l~~~~~~~~~ai~lssllFglaH~~h~~e~~~~~g~~~~~al~~~~~Q~~yt~lf  145 (226)
                      ...+-..+++|+.||++|||.+++.+. ++++...++++||++||+.|....       ..         ...+.+++.+
T Consensus       124 ~~~~~~~i~~~l~EEl~fRg~l~~~l~-~~~~~~~a~iissllFal~H~~~~-------~~---------~~~~~~~~~~  186 (226)
T COG1266         124 LFFLVLLILAPLAEELLFRGYLLGALA-RRFGPLLAIIISSLLFALLHLPNG-------LL---------LLYFLLYFIA  186 (226)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhHHHHH-HhcCcHHHHHHHHHHHHHHHhccc-------ch---------HHHHHHHHHH
Confidence            344567889999999999999999986 577888999999999999999831       00         1346788899


Q ss_pred             HHHHHHHHHhhCCchHHHHHHHHhhh
Q 027199          146 GWYASFLFIRTGHLAAPLIAHIFCNY  171 (226)
Q Consensus       146 G~~~a~ly~rTgsL~~~il~H~~~N~  171 (226)
                      |...+++|.||||++.++..|+.+|.
T Consensus       187 gli~~~~~~~t~~l~~~i~~H~~~N~  212 (226)
T COG1266         187 GLILGLLYLRTGSLWVPILLHALINL  212 (226)
T ss_pred             HHHHHHHHHHhCCcHHHHHHHHHHHH
Confidence            99999999999999999999999996

>COG4449 Predicted protease of the Abi (CAAX) family [General function prediction only]

Probab=96.68  E-value=0.00087  Score=65.06  Aligned_cols=97  Identities=22%  Similarity=0.242  Sum_probs=70.9

Q ss_pred             HhhhhhhhhhHHHHHHHHhhHHHHHcCCCCcchhHHHHH--HHHHHhhhhhHHHHHHhhhhhHHHHHHHHHHHHHHHHHH
Q 027199           68 AWRNFVVAPLTEELVFRACMIPLLLCGGFKINTIIFLCP--VFFSLAHLNHLMEIYSAQNFSLLKASMIVGLQLGYTVVF  145 (226)
Q Consensus        68 ~~rn~IvaPi~EElvFRg~ll~~l~~~~~~~~~ai~lss--llFglaH~~h~~e~~~~~g~~~~~al~~~~~Q~~yt~lf  145 (226)
                      -+|.+++-.+.||++||..++|--. ++..++..+....  ++|-+.|..+...++ ..|.+..   +.-.| +.-|.++
T Consensus       712 iL~vIl~PAl~EElvFRvvLlP~P~-E~r~~W~tl~a~~~l~LfvLyHplnA~T~y-~rg~PvF---f~PiF-L~ltglL  785 (827)
T COG4449         712 ILTVILIPALGEELVFRVVLLPGPG-EGRRPWVTLGAATGLVLFVLYHPLNALTFY-PRGAPVF---FRPIF-LLLTGLL  785 (827)
T ss_pred             hhhheehhhccccceeEEEecCCCC-ccccchHhHHHHHHHHHHHHhhhhhhhhcc-ccCCcce---eccHH-HHHHHHH
Confidence            3567778889999999999999765 3434555555444  489999998887776 4444421   11122 4457788


Q ss_pred             HHHHHHHHHhhCCchHHHHHHHHhh
Q 027199          146 GWYASFLFIRTGHLAAPLIAHIFCN  170 (226)
Q Consensus       146 G~~~a~ly~rTgsL~~~il~H~~~N  170 (226)
                      |+-.+.-|.-|||+|+.+++|...=
T Consensus       786 GL~Ctvty~vT~SlW~iV~lHW~vV  810 (827)
T COG4449         786 GLGCTVTYRVTGSLWPIVLLHWAVV  810 (827)
T ss_pred             hhhhhhhHHhccchHHHHHHHHHHH
Confidence            9999999999999999999998754

>PF13367 PrsW-protease: Protease prsW family

Probab=86.51  E-value=18  Score=30.22  Aligned_cols=108  Identities=18%  Similarity=0.167  Sum_probs=60.9

Q ss_pred             HhhhhhhhhhHHHHHHHHhhHHHH--HcCCC-CcchhHH---HHHHHHHHhhhhhHHHHHH-h------h--hhhHHHHH
Q 027199           68 AWRNFVVAPLTEELVFRACMIPLL--LCGGF-KINTIIF---LCPVFFSLAHLNHLMEIYS-A------Q--NFSLLKAS  132 (226)
Q Consensus        68 ~~rn~IvaPi~EElvFRg~ll~~l--~~~~~-~~~~ai~---lssllFglaH~~h~~e~~~-~------~--g~~~~~al  132 (226)
                      .+...+.+|++||.+=--.++-..  .++++ ++...++   .+++=|++..--...-... +      .  ...+.+.+
T Consensus        43 ~~~~~~~a~~~EE~~K~l~v~~~~~~~~~~~~~~~d~~~~g~a~GlGFa~~En~~Y~~~~~~~~~~~~~~~~~~~~~R~~  122 (191)
T PF13367_consen   43 LWGAFLIAPLVEEFAKLLPVLLLLLLRRRRFDEPMDGLVYGAAVGLGFAIMENILYILNAAEDNGGSVQGGLSTAILRGI  122 (191)
T ss_pred             HHHHHHHhHHHHHHHHHHHHHHHHHHhhHhhcCcchhhhhhhHHHHHHHHHHHHHHHHHhhhcccchhhhHHHHHHHHHH
Confidence            556788999999986332222222  12222 3333332   4666677665442211000 0      0  01123444


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhh---------CCchHHHHHHHHhhhhhhh
Q 027199          133 MIVGLQLGYTVVFGWYASFLFIRT---------GHLAAPLIAHIFCNYMGLP  175 (226)
Q Consensus       133 ~~~~~Q~~yt~lfG~~~a~ly~rT---------gsL~~~il~H~~~N~~Glp  175 (226)
                      ........+|.+.|...++...|.         +-+..+++.|+++|.....
T Consensus       123 ~~~~~H~~~t~i~g~~l~~~~~~~~~~~~~~~~~~~~~a~~lH~~~N~~~~~  174 (191)
T PF13367_consen  123 TSVPGHALFTAIFGYGLGLAKRRRKRGFRLALLLGFLLAVLLHGLWNFPLSL  174 (191)
T ss_pred             HHHhHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHhHHHH
Confidence            455667889999998777766322         3467899999999987554

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00