Citrus Sinensis ID: 027209
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 226 | ||||||
| 255580868 | 300 | conserved hypothetical protein [Ricinus | 0.867 | 0.653 | 0.852 | 2e-92 | |
| 147856521 | 342 | hypothetical protein VITISV_030871 [Viti | 0.871 | 0.576 | 0.857 | 1e-91 | |
| 449451437 | 299 | PREDICTED: uncharacterized protein LOC10 | 0.871 | 0.658 | 0.807 | 5e-89 | |
| 356567722 | 303 | PREDICTED: uncharacterized protein LOC10 | 0.867 | 0.646 | 0.806 | 5e-86 | |
| 356540285 | 301 | PREDICTED: uncharacterized protein LOC10 | 0.867 | 0.651 | 0.801 | 5e-85 | |
| 356540287 | 305 | PREDICTED: uncharacterized protein LOC10 | 0.867 | 0.642 | 0.801 | 9e-85 | |
| 224083697 | 300 | predicted protein [Populus trichocarpa] | 0.871 | 0.656 | 0.781 | 2e-84 | |
| 224096181 | 300 | predicted protein [Populus trichocarpa] | 0.871 | 0.656 | 0.796 | 7e-82 | |
| 15236057 | 299 | uncharacterized protein [Arabidopsis tha | 0.867 | 0.655 | 0.781 | 8e-82 | |
| 30692553 | 298 | uncharacterized protein [Arabidopsis tha | 0.876 | 0.664 | 0.773 | 1e-81 |
| >gi|255580868|ref|XP_002531253.1| conserved hypothetical protein [Ricinus communis] gi|223529138|gb|EEF31117.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
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Score = 343 bits (881), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 167/196 (85%), Positives = 186/196 (94%)
Query: 31 QQAMNGISQISFSAEETVSPKKPTSVPEVAKQRELSGSLQSESDLKTKKQISDAKFKEIS 90
QQAMNGISQISFS EE++SPKKPTS+PEVAKQRELSG+LQSE+DLK KKQIS+AKFKEIS
Sbjct: 105 QQAMNGISQISFSTEESISPKKPTSLPEVAKQRELSGTLQSEADLKNKKQISNAKFKEIS 164
Query: 91 GHDIFSPAPEIQPRSLAAARSLESKESKDMGEPAPRNVRTSVKVSNPAGGQSNILFGEEP 150
GHDIF+P+P+I RSLAAAR+LESKE+KDM +PAPRN+RTSVKVSNPAGGQSNILFGE+P
Sbjct: 165 GHDIFAPSPDISTRSLAAARTLESKENKDMEKPAPRNIRTSVKVSNPAGGQSNILFGEDP 224
Query: 151 VVKTSKKIHNQKFAELTGNDIFKGDVPPGSAEKPLSNAKLREMSGSNIFADEKVESRDYF 210
V +T+KKIHNQKF ELTGNDIFKGDVPPGSAEKPLSNAKL+E+SGSNIFAD K ESRDYF
Sbjct: 225 VTRTAKKIHNQKFQELTGNDIFKGDVPPGSAEKPLSNAKLKEISGSNIFADGKSESRDYF 284
Query: 211 GGVRKPPGGESSISLV 226
GVRKPPGGESSI+LV
Sbjct: 285 RGVRKPPGGESSIALV 300
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Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|147856521|emb|CAN82836.1| hypothetical protein VITISV_030871 [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|449451437|ref|XP_004143468.1| PREDICTED: uncharacterized protein LOC101209377 [Cucumis sativus] gi|449504822|ref|XP_004162304.1| PREDICTED: uncharacterized protein LOC101230134 [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|356567722|ref|XP_003552066.1| PREDICTED: uncharacterized protein LOC100804656 [Glycine max] | Back alignment and taxonomy information |
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| >gi|356540285|ref|XP_003538620.1| PREDICTED: uncharacterized protein LOC100789861 isoform 1 [Glycine max] | Back alignment and taxonomy information |
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| >gi|356540287|ref|XP_003538621.1| PREDICTED: uncharacterized protein LOC100789861 isoform 2 [Glycine max] | Back alignment and taxonomy information |
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| >gi|224083697|ref|XP_002307088.1| predicted protein [Populus trichocarpa] gi|222856537|gb|EEE94084.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|224096181|ref|XP_002310565.1| predicted protein [Populus trichocarpa] gi|118485862|gb|ABK94778.1| unknown [Populus trichocarpa] gi|222853468|gb|EEE91015.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|15236057|ref|NP_195696.1| uncharacterized protein [Arabidopsis thaliana] gi|4490737|emb|CAB38899.1| putative protein [Arabidopsis thaliana] gi|7271041|emb|CAB80649.1| putative protein [Arabidopsis thaliana] gi|332661729|gb|AEE87129.1| uncharacterized protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|30692553|ref|NP_849528.1| uncharacterized protein [Arabidopsis thaliana] gi|17380782|gb|AAL36221.1| unknown protein [Arabidopsis thaliana] gi|21436383|gb|AAM51361.1| unknown protein [Arabidopsis thaliana] gi|332661730|gb|AEE87130.1| uncharacterized protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 226 | ||||||
| TAIR|locus:2140000 | 299 | AT4G39860 "AT4G39860" [Arabido | 0.867 | 0.655 | 0.781 | 2.7e-77 | |
| TAIR|locus:2060425 | 328 | AT2G22270 "AT2G22270" [Arabido | 0.862 | 0.594 | 0.590 | 4e-51 | |
| TAIR|locus:2011375 | 286 | AT1G35780 "AT1G35780" [Arabido | 0.623 | 0.493 | 0.444 | 4.2e-24 |
| TAIR|locus:2140000 AT4G39860 "AT4G39860" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 778 (278.9 bits), Expect = 2.7e-77, P = 2.7e-77
Identities = 154/197 (78%), Positives = 175/197 (88%)
Query: 30 FQQAMNGISQISFSAEETVSPKKPTSVPEVAKQRELSGSLQSESDLKTKKQISDAKFKEI 89
+QQ +NG+SQISFSA+ VSPKKPT++ EVAKQRELSG+L +E+DLK+ KQIS AK +EI
Sbjct: 104 YQQTLNGMSQISFSADGNVSPKKPTTLTEVAKQRELSGNLLTEADLKSNKQISSAKIEEI 163
Query: 90 SGHDIFSPAPEIQPRSLAAARSLESKESKDMGEPAPRNVRTSVKVSNPAGGQSNILFGEE 149
SGHDIF+P EIQPRSL AA+ E++ ++DMGEPAPRN+RTSVKVSNPAGGQSNILF EE
Sbjct: 164 SGHDIFAPPSEIQPRSLVAAQQ-EARGNRDMGEPAPRNLRTSVKVSNPAGGQSNILFSEE 222
Query: 150 PVVKTSKKIHNQKFAELTGNDIFKGDVPPGSAEKPLSNAKLREMSGSNIFADEKVESRDY 209
PVVKTSKKIHNQKF ELTGN IFKGD PGSA+K LS+AKLREMSG+NIFAD K ESRDY
Sbjct: 223 PVVKTSKKIHNQKFQELTGNGIFKGDESPGSADKQLSSAKLREMSGNNIFADGKSESRDY 282
Query: 210 FGGVRKPPGGESSISLV 226
FGGVRKPPGGESSISLV
Sbjct: 283 FGGVRKPPGGESSISLV 299
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| TAIR|locus:2060425 AT2G22270 "AT2G22270" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2011375 AT1G35780 "AT1G35780" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| GSVIVG00012867001 | SubName- Full=Chromosome undetermined scaffold_408, whole genome shotgun sequence; (306 aa) | |||||||
(Vitis vinifera) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 226 | |||
| pfam13266 | 297 | pfam13266, DUF4057, Protein of unknown function (D | 1e-114 | |
| pfam13266 | 297 | pfam13266, DUF4057, Protein of unknown function (D | 2e-04 |
| >gnl|CDD|222016 pfam13266, DUF4057, Protein of unknown function (DUF4057) | Back alignment and domain information |
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Score = 328 bits (842), Expect = e-114
Identities = 157/193 (81%), Positives = 171/193 (88%), Gaps = 1/193 (0%)
Query: 32 QAMNGISQISFSAEETVSPKKPTSVPEVAKQRELSGSLQSESDLKTKKQISDAKFKEISG 91
QA GISQISFS EE+VSPKKPTSVPEVAKQRELSG+L+SE+D K KKQIS+AK KE+SG
Sbjct: 106 QAQAGISQISFSEEESVSPKKPTSVPEVAKQRELSGTLESEADSKMKKQISNAKSKELSG 165
Query: 92 HDIFSPAPEIQPRSLAAARSLESKESKDMGEPAPRNVRTSVKVSNPAGGQSNILFGEEPV 151
HDIF+P PEI+PRSLAA LE KE+KD GEPAPRN RTSVKVSNPAGGQSNI F E+ V
Sbjct: 166 HDIFAPPPEIKPRSLAARL-LELKENKDRGEPAPRNARTSVKVSNPAGGQSNIEFSEDSV 224
Query: 152 VKTSKKIHNQKFAELTGNDIFKGDVPPGSAEKPLSNAKLREMSGSNIFADEKVESRDYFG 211
VKT+KKIHNQKF ELTGN+IFKGDVPP SAEKPLS AKL+EMSGSNIFAD K ESRDY G
Sbjct: 225 VKTAKKIHNQKFTELTGNNIFKGDVPPASAEKPLSTAKLKEMSGSNIFADGKAESRDYLG 284
Query: 212 GVRKPPGGESSIS 224
GVRKPPGGESSI+
Sbjct: 285 GVRKPPGGESSIA 297
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This family of proteins is functionally uncharacterized. This family of proteins is found in eukaryotes. Proteins in this family are typically between 279 and 322 amino acids in length. Length = 297 |
| >gnl|CDD|222016 pfam13266, DUF4057, Protein of unknown function (DUF4057) | Back alignment and domain information |
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Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 226 | |||
| PF13266 | 302 | DUF4057: Protein of unknown function (DUF4057) | 100.0 | |
| PF13266 | 302 | DUF4057: Protein of unknown function (DUF4057) | 100.0 |
| >PF13266 DUF4057: Protein of unknown function (DUF4057) | Back alignment and domain information |
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Probab=100.00 E-value=1.4e-83 Score=578.11 Aligned_cols=199 Identities=81% Similarity=1.136 Sum_probs=196.4
Q ss_pred cccccccccCCCcceeeecCCCcCCCCCCCChhHhhhhhhhccccCCccccccccccchhhhhhhhcCccCCCCCCCCcc
Q 027209 25 FWRLNFQQAMNGISQISFSAEETVSPKKPTSVPEVAKQRELSGSLQSESDLKTKKQISDAKFKEISGHDIFSPAPEIQPR 104 (226)
Q Consensus 25 ~~~r~~qq~~~g~SqIsFg~e~~~spkKp~s~~EvAKqrELsGt~~~~~~~~~~K~~S~aK~KEmsGs~IFa~p~e~~pr 104 (226)
-++|||||+++|+|||||++||+++||||||++|||||||||||+++++|.+.+||+|+||+|||+|||||++|+++.||
T Consensus 104 t~vr~yQq~~~giSqISF~~eesvsPKKpts~~EVAKQRELSGTlese~D~k~kkq~S~AK~KELSGhdIFapp~~~~pr 183 (302)
T PF13266_consen 104 TGVRMYQQAINGISQISFSEEESVSPKKPTSLPEVAKQRELSGTLESEADSKMKKQISNAKSKELSGHDIFAPPPEIKPR 183 (302)
T ss_pred cccceecccccccceeeecCCCCcCCCCccchHHHHHHhhhcCccccchhhHHHhhhhhhhhhhcccCcccCCCccCCCC
Confidence 48999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHhhhhhhhhcccCCCCCCCCCccceeeeecCCCCCcceecCCCCccccccccchhhhhhhcCCcccCCCCCCCCCCCC
Q 027209 105 SLAAARSLESKESKDMGEPAPRNVRTSVKVSNPAGGQSNILFGEEPVVKTSKKIHNQKFAELTGNDIFKGDVPPGSAEKP 184 (226)
Q Consensus 105 ~~~~a~~~~~k~~~~~~~~~p~n~~t~~~v~~~~~g~S~IsFsee~~vkt~Kkis~~K~aELSGndIFk~D~~p~~aeK~ 184 (226)
.++ +|.||+|||++++||+|+|.+|++++.++++|+|+|.|++|+++||+||||++||+||+|||||++|.++.++||+
T Consensus 184 ~~~-~r~le~k~~~~~~e~~~~~~~ts~~~~n~a~~~s~~~~~~~~~~Ktakki~~~K~aeltGN~IFk~d~p~~saek~ 262 (302)
T PF13266_consen 184 SLT-ARSLELKENKDRGEPAPRNVRTSVKVSNPAGGQSNIEFGEDSVVKTAKKISNQKFAELTGNNIFKGDVPPASAEKP 262 (302)
T ss_pred cch-hhhhhhcccccccCCCCCcccccccccCCcCcccccccccCcchhhhhhhhhhhhhhcccCcccCCCCCCCCcccc
Confidence 994 8999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CchhhhhccCCCCCCCCCcccccccCCCcccCCCCCCCcc
Q 027209 185 LSNAKLREMSGSNIFADEKVESRDYFGGVRKPPGGESSIS 224 (226)
Q Consensus 185 lS~AKlkEmSGsDIFADgK~~~Rd~~ggvrkPPGGeSSIa 224 (226)
||.||||||+|+|||||||+++|||+|||||||||+||||
T Consensus 263 lS~AKlrEmsGsdIFaDgk~~~rd~~gg~rkPPGG~SSIa 302 (302)
T PF13266_consen 263 LSSAKLREMSGSDIFADGKAESRDYLGGVRKPPGGESSIA 302 (302)
T ss_pred hhhhhHhhcccccccccCCcccchhcCCccCCCCCCCcCC
Confidence 9999999999999999999999999999999999999997
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| >PF13266 DUF4057: Protein of unknown function (DUF4057) | Back alignment and domain information |
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Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
No hit with e-value below 0.005
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00