Citrus Sinensis ID: 027329
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 225 | ||||||
| 311120210 | 225 | pathogenesis related protein-5 [Populus | 0.995 | 0.995 | 0.769 | 1e-95 | |
| 190358875 | 225 | RecName: Full=Thaumatin-like protein; Al | 0.973 | 0.973 | 0.746 | 8e-92 | |
| 441482370 | 225 | thaumatin-like protein [Actinidia chinen | 0.973 | 0.973 | 0.737 | 1e-91 | |
| 258598075 | 251 | pathogenesis-related protein 5 [Panax gi | 0.982 | 0.880 | 0.756 | 4e-91 | |
| 449452358 | 223 | PREDICTED: thaumatin-like protein-like [ | 0.96 | 0.968 | 0.744 | 3e-90 | |
| 224143792 | 225 | predicted protein [Populus trichocarpa] | 0.973 | 0.973 | 0.764 | 4e-90 | |
| 161375756 | 230 | osmotin [Piper colubrinum] | 0.911 | 0.891 | 0.777 | 2e-89 | |
| 225426801 | 225 | PREDICTED: thaumatin-like protein [Vitis | 1.0 | 1.0 | 0.693 | 2e-89 | |
| 14290147 | 226 | thaumatin-like protein [Sambucus nigra] | 0.995 | 0.991 | 0.709 | 2e-89 | |
| 146737976 | 201 | thaumatin-like protein [Actinidia delici | 0.893 | 1.0 | 0.796 | 4e-89 |
| >gi|311120210|gb|ADP69173.1| pathogenesis related protein-5 [Populus tomentosa] | Back alignment and taxonomy information |
|---|
Score = 355 bits (910), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 174/226 (76%), Positives = 192/226 (84%), Gaps = 2/226 (0%)
Query: 1 MSFFTYFLIFFLFISLSSL-TSTHGATFEIRNNCPFTVWAAAVPGGGRQLIRGQTWTINV 59
MS F+Y +F F+ + L T ++ ATFEIRN C TVWAAAVPGGG++L G++WTI
Sbjct: 1 MSRFSYLSLFPCFLLFAHLFTFSNAATFEIRNQCTDTVWAAAVPGGGQRLDPGRSWTITA 60
Query: 60 NPGTKQARIWARTKCTFNAEGRGRCETGDCNGLLQCQAYGAPPNTLAEYTLNQFNNLDFY 119
N GT QARIW RTKC F+ GRG CETGDCNGLLQCQAYG PPNTLAEY LNQFNNLDF+
Sbjct: 61 NAGTTQARIWGRTKCNFDGAGRGTCETGDCNGLLQCQAYGKPPNTLAEYALNQFNNLDFF 120
Query: 120 DISLVDGFNVPMDFSPLSGIRCRGIRCAADITGQCPNELRAPGGCNNPCTVFKTDQYCCN 179
DISLVDGFNVPMDFSP+SG CRGIRCAADI GQCPN+LRA GGCNNPCTVFKTDQYCCN
Sbjct: 121 DISLVDGFNVPMDFSPVSG-NCRGIRCAADINGQCPNQLRASGGCNNPCTVFKTDQYCCN 179
Query: 180 SGKCVPTNFSKFFKQRCPNAYSYPKDDQTSTFTCPGGTNYKVTFCP 225
SG C PT+FS+FFKQRCP+AYSYPKDDQTSTFTCPGGTNY+V FCP
Sbjct: 180 SGTCGPTDFSRFFKQRCPDAYSYPKDDQTSTFTCPGGTNYRVVFCP 225
|
Source: Populus tomentosa Species: Populus tomentosa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|190358875|sp|P81370.2|TLP_ACTDE RecName: Full=Thaumatin-like protein; AltName: Allergen=Act d 2; Flags: Precursor gi|71057064|emb|CAI38795.2| thaumatin-like protein [Actinidia deliciosa] gi|441482368|gb|AGC39175.1| thaumatin-like protein [Actinidia deliciosa] | Back alignment and taxonomy information |
|---|
| >gi|441482370|gb|AGC39176.1| thaumatin-like protein [Actinidia chinensis] | Back alignment and taxonomy information |
|---|
| >gi|258598075|gb|ACV83333.1| pathogenesis-related protein 5 [Panax ginseng] | Back alignment and taxonomy information |
|---|
| >gi|449452358|ref|XP_004143926.1| PREDICTED: thaumatin-like protein-like [Cucumis sativus] gi|449495850|ref|XP_004159963.1| PREDICTED: thaumatin-like protein-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|224143792|ref|XP_002325077.1| predicted protein [Populus trichocarpa] gi|222866511|gb|EEF03642.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|161375756|gb|ABX71220.1| osmotin [Piper colubrinum] | Back alignment and taxonomy information |
|---|
| >gi|225426801|ref|XP_002283030.1| PREDICTED: thaumatin-like protein [Vitis vinifera] gi|147770982|emb|CAN60240.1| hypothetical protein VITISV_027469 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|14290147|gb|AAK59275.1|AF378571_1 thaumatin-like protein [Sambucus nigra] | Back alignment and taxonomy information |
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| >gi|146737976|gb|ABQ42566.1| thaumatin-like protein [Actinidia deliciosa] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 225 | ||||||
| TAIR|locus:2139777 | 244 | OSM34 "osmotin 34" [Arabidopsi | 0.884 | 0.815 | 0.699 | 1.1e-80 | |
| TAIR|locus:2037235 | 239 | PR5 "AT1G75040" [Arabidopsis t | 0.871 | 0.820 | 0.456 | 6.9e-47 | |
| TAIR|locus:2037227 | 246 | AT1G75050 "AT1G75050" [Arabido | 0.875 | 0.800 | 0.438 | 2.7e-45 | |
| TAIR|locus:2027161 | 246 | TLP-3 "AT1G75030" [Arabidopsis | 0.875 | 0.800 | 0.427 | 6.4e-44 | |
| TAIR|locus:2203236 | 356 | AT1G77700 "AT1G77700" [Arabido | 0.857 | 0.542 | 0.453 | 2.8e-43 | |
| TAIR|locus:2121189 | 345 | AT4G38660 "AT4G38660" [Arabido | 0.888 | 0.579 | 0.416 | 5.2e-42 | |
| TAIR|locus:2016442 | 247 | AT1G19320 "AT1G19320" [Arabido | 0.831 | 0.757 | 0.448 | 1.1e-41 | |
| TAIR|locus:2027864 | 264 | AT1G73620 [Arabidopsis thalian | 0.853 | 0.727 | 0.416 | 4.2e-40 | |
| TAIR|locus:2194344 | 244 | ATLP-1 [Arabidopsis thaliana ( | 0.853 | 0.786 | 0.425 | 1.8e-39 | |
| UNIPROTKB|O80327 | 244 | TL1 "Thaumatin-like protein 1" | 0.795 | 0.733 | 0.432 | 3.7e-39 |
| TAIR|locus:2139777 OSM34 "osmotin 34" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 810 (290.2 bits), Expect = 1.1e-80, P = 1.1e-80
Identities = 142/203 (69%), Positives = 163/203 (80%)
Query: 25 ATFEIRNNCPFTVWAAAVPGGGRQLIRGQTWTINVNPGTKQARIWARTKCTFNAEGRGRC 84
ATFEI N C +TVWAAA PGGGR+L GQ+W ++V GTK ARIW RT C F++ GRGRC
Sbjct: 23 ATFEILNQCSYTVWAAASPGGGRRLDAGQSWRLDVAAGTKMARIWGRTNCNFDSSGRGRC 82
Query: 85 ETGDCNGLLQCQAYGAPPNTLAEYTLNQFNNLDFYDISLVDGFNVPMDFSPLSGIRCRGI 144
+TGDC+G LQC +G PPNTLAEY LNQFNNLDFYDISLVDGFN+PM+FSP S C I
Sbjct: 83 QTGDCSGGLQCTGWGQPPNTLAEYALNQFNNLDFYDISLVDGFNIPMEFSPTSS-NCHRI 141
Query: 145 RCAADITGQCPNELRAPGGCNNPCTVFKTDQYCCNSGK--CVPTNFSKFFKQRCPNAYSY 202
C ADI GQCPN LRAPGGCNNPCTVF+T+QYCC +G+ C T +S+FFKQRCP+AYSY
Sbjct: 142 LCTADINGQCPNVLRAPGGCNNPCTVFQTNQYCCTNGQGSCSDTEYSRFFKQRCPDAYSY 201
Query: 203 PKDDQTSTFTCPGGTNYKVTFCP 225
P+DD TSTFTC TNY+V FCP
Sbjct: 202 PQDDPTSTFTCTN-TNYRVVFCP 223
|
|
| TAIR|locus:2037235 PR5 "AT1G75040" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2037227 AT1G75050 "AT1G75050" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2027161 TLP-3 "AT1G75030" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2203236 AT1G77700 "AT1G77700" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2121189 AT4G38660 "AT4G38660" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2016442 AT1G19320 "AT1G19320" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2027864 AT1G73620 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2194344 ATLP-1 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| UNIPROTKB|O80327 TL1 "Thaumatin-like protein 1" [Pyrus pyrifolia (taxid:3767)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 225 | |||
| smart00205 | 218 | smart00205, THN, Thaumatin family | 1e-101 | |
| pfam00314 | 212 | pfam00314, Thaumatin, Thaumatin family | 1e-101 | |
| cd09218 | 219 | cd09218, TLP-PA, allergenic/antifungal thaumatin-l | 6e-78 | |
| cd09217 | 151 | cd09217, TLP-P, thaumatin and allergenic/antifunga | 3e-73 | |
| cd09215 | 157 | cd09215, Thaumatin-like, the sweet-tasting protein | 9e-60 | |
| cd08961 | 153 | cd08961, GH64-TLP-SF, glycoside hydrolase family 6 | 2e-46 | |
| cd09219 | 229 | cd09219, TLP-F, thaumatin-like proteins: basidiomy | 2e-31 |
| >gnl|CDD|128501 smart00205, THN, Thaumatin family | Back alignment and domain information |
|---|
Score = 292 bits (749), Expect = e-101
Identities = 131/218 (60%), Positives = 151/218 (69%), Gaps = 19/218 (8%)
Query: 27 FEIRNNCPFTVWAAAVP-------GGGRQLIRGQTWTINVNPGTKQARIWARTKCTFNAE 79
FE NNCP+TVWAAA+P GGG +L G +W ++ PGTK RIWART C F+A
Sbjct: 1 FEFVNNCPYTVWAAALPSGKPQLSGGGFELNSGASWQLDAPPGTKMGRIWARTGCNFDAS 60
Query: 80 GRGRCETGDCNGLLQCQAYGA-PPNTLAEYTLNQFNNLDFYDISLVDGFNVPMDFSPLSG 138
GRGRC TGDC G+LQC +G PP TLAE+ LNQF LDFYD+SLVDGFN+PM F+P G
Sbjct: 61 GRGRCATGDCGGVLQCNGWGGRPPATLAEFALNQFGGLDFYDVSLVDGFNIPMSFTPTGG 120
Query: 139 IR-CRGIRCAADITGQCPNELRAPGG-----CNNPCTVFKTDQYCC-----NSGKCVPTN 187
C+G C AD+ QCP EL+ PGG CN+ CTVF TDQYCC N C PTN
Sbjct: 121 SGDCKGAGCTADLNAQCPAELQVPGGGSVVACNSACTVFGTDQYCCTGGQNNPETCPPTN 180
Query: 188 FSKFFKQRCPNAYSYPKDDQTSTFTCPGGTNYKVTFCP 225
+S+ FK CP+AYSY DD TSTFTC GGTNYKVTFCP
Sbjct: 181 YSRIFKNACPDAYSYAYDDPTSTFTCTGGTNYKVTFCP 218
|
The thaumatin family gathers proteins related to plant pathogenesis. The thaumatin family includes very basic members with extracellular and vacuolar localization. Thaumatin itsel is a potent sweet-tasting protein. Several members of this family display significant in vitro activity of inhibiting hyphal growth or spore germination of various fungi probably by a membrane permeabilizing mechanism. Length = 218 |
| >gnl|CDD|215853 pfam00314, Thaumatin, Thaumatin family | Back alignment and domain information |
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| >gnl|CDD|185757 cd09218, TLP-PA, allergenic/antifungal thaumatin-like proteins: plant and animal homologs | Back alignment and domain information |
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| >gnl|CDD|185756 cd09217, TLP-P, thaumatin and allergenic/antifungal thaumatin-like proteins: plant homologs | Back alignment and domain information |
|---|
| >gnl|CDD|185754 cd09215, Thaumatin-like, the sweet-tasting protein, thaumatin, and thaumatin-like proteins involved in host defense | Back alignment and domain information |
|---|
| >gnl|CDD|185752 cd08961, GH64-TLP-SF, glycoside hydrolase family 64 (beta-1,3-glucanases which produce specific pentasaccharide oligomers) and thaumatin-like proteins | Back alignment and domain information |
|---|
| >gnl|CDD|185758 cd09219, TLP-F, thaumatin-like proteins: basidiomycete homologs | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 225 | |||
| cd09218 | 219 | TLP-PA allergenic/antifungal thaumatin-like protei | 100.0 | |
| smart00205 | 218 | THN Thaumatin family. The thaumatin family gathers | 100.0 | |
| cd09219 | 229 | TLP-F thaumatin-like proteins: basidiomycete homol | 100.0 | |
| PF00314 | 213 | Thaumatin: Thaumatin family; InterPro: IPR001938 T | 100.0 | |
| cd09215 | 157 | Thaumatin-like the sweet-tasting protein, thaumati | 100.0 | |
| cd09217 | 151 | TLP-P thaumatin and allergenic/antifungal thaumati | 100.0 | |
| cd08961 | 153 | GH64-TLP-SF glycoside hydrolase family 64 (beta-1, | 100.0 | |
| PF04681 | 155 | Bys1: Blastomyces yeast-phase-specific protein; In | 98.33 | |
| cd09216 | 353 | GH64-LPHase-like glycoside hydrolase family 64: la | 91.83 | |
| cd09220 | 369 | GH64-GluB-like glycoside hydrolase family 64: beta | 90.17 |
| >cd09218 TLP-PA allergenic/antifungal thaumatin-like proteins: plant and animal homologs | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-79 Score=531.75 Aligned_cols=198 Identities=51% Similarity=1.078 Sum_probs=187.1
Q ss_pred EEEEEcCCCCceeeeeeC--------CCceeecCCCeEEEEcCCCCccceeeeecccccCCCCCcccccCCCCCceeccc
Q 027329 26 TFEIRNNCPFTVWAAAVP--------GGGRQLIRGQTWTINVNPGTKQARIWARTKCTFNAEGRGRCETGDCNGLLQCQA 97 (225)
Q Consensus 26 t~tv~N~C~~tVwp~~~p--------~~g~~L~~G~s~s~~~p~~w~sGriw~RtgCs~~~~g~~~C~TGdCgg~~~C~~ 97 (225)
+|||+|||+||||||+++ ++||+|+||++++|++|++| +|||||||+|+||+.|+++|+||||+|+++|++
T Consensus 1 tfti~N~C~~tVWp~~~~~~g~~~l~~gGf~L~~g~s~~~~vp~~W-sGriWaRTgC~~~~~g~~~C~TGDCgg~l~C~g 79 (219)
T cd09218 1 TFTIYNKCPFTVWPGILGNAGHPQLGGGGFELAPGQSRTIDAPSGW-SGRFWGRTGCSFDSSGKGSCATGDCGGGLECNG 79 (219)
T ss_pred CEEEEECCCCCccceecCCCCCCCCCCCCEEcCCCCeEEEeCCCCc-ceeeeeccCCCCCCCCccccccCCCCCeeecCC
Confidence 599999999999999975 37999999999999999999 799999999999999999999999999999997
Q ss_pred -CCCCCcceeeeeeccCCCcceeeecccCCcCCceeeeecCCC-ccccccccccccCCCCCCCCCC------CCccCCcc
Q 027329 98 -YGAPPNTLAEYTLNQFNNLDFYDISLVDGFNVPMDFSPLSGI-RCRGIRCAADITGQCPNELRAP------GGCNNPCT 169 (225)
Q Consensus 98 -~g~~paTlaEftl~~~~~~d~YDVSlVdG~NlP~~i~p~~~~-~C~~~~C~~dl~~~CP~~l~~~------~gC~SaC~ 169 (225)
.|.||+|||||||++.+++|||||||||||||||+|+|+++. .|+..+|.+|||+.||.||+++ .||+|||.
T Consensus 80 ~~g~pP~TlaEftl~~~~~~d~YdvSlVdGfNlP~~i~P~~~~~~C~~~~C~~din~~CP~~L~v~~~~g~vv~C~SaC~ 159 (219)
T cd09218 80 AGGAPPATLAEFTLGGSGGQDFYDVSLVDGYNLPVSITPQGGSGGCRTAGCVADLNAVCPAELQVKNSGGRVVACKSACL 159 (219)
T ss_pred CCCCCCceeEEEEeccCCCCcceeeeeeccccCCEEEEecCCCCCCCCCcccCcccccCCHHHeeccCCCcEeeecCHHH
Confidence 557999999999998778999999999999999999998643 4999999999999999999985 27999999
Q ss_pred ccCCCccccCCC-----CCCCchhHHHHHhhCCcccCCCCCCCCCceeeCCCCceEEEec
Q 027329 170 VFKTDQYCCNSG-----KCVPTNFSKFFKQRCPNAYSYPKDDQTSTFTCPGGTNYKVTFC 224 (225)
Q Consensus 170 ~~~~~~~CC~g~-----~C~pt~ys~~fK~~CP~AYsya~Dd~tstftC~~~~~y~ItFC 224 (225)
+|++|||||+|. +|+|++||++||++||+||+|||||++|+|+|+++++|+||||
T Consensus 160 ~f~~~~~CC~g~~~~p~~C~pt~ys~~FK~~CP~Aysya~Dd~~s~~tC~~~~~Y~I~FC 219 (219)
T cd09218 160 AFNTDEYCCRGAYGTPETCKPTTYSRLFKNACPQAYSYAYDDPTSTFTCSSGANYVITFC 219 (219)
T ss_pred hhCCccceecCCCCCCCcCCCcchhHHHHhhCccccccCCCCCCcceEcCCCCCEEEEeC
Confidence 999999999986 7999999999999999999999999999999998899999999
|
This subfamily is represented by the thaumatin-like proteins (TLPs), Cherry Allergen Pru Av 2 TLP, Peach PpAZ44 TLP (a propylene-induced TLP in abscission), the Caenorhabditis elegans thaumatin family member (thn-6), and other plant and animal homologs. TLPs are involved in host defense and a wide range of developmental processes in fungi, plants, and animals. Due to their inducible expression by environmental stresses such as pathogen/pest attack, drought and cold, plant TLPs are classified as the pathogenesis-related (PR) protein family 5 (PR5). Several members of the plant TLP family have been reported as food allergens from fruits (i.e., cherry, Pru av 2; bell pepper, Cap a1; tomatoes, Lyc e NP24) and pollen allergens from conifers (i.e., mountain cedar, Jun a 3; Arizona cypress, Cup a3; Japanese cedar, Cry j3). TLPs are three-domain, crescent-fold structures with either an electronegative, ele |
| >smart00205 THN Thaumatin family | Back alignment and domain information |
|---|
| >cd09219 TLP-F thaumatin-like proteins: basidiomycete homologs | Back alignment and domain information |
|---|
| >PF00314 Thaumatin: Thaumatin family; InterPro: IPR001938 Thaumatin [] is an intensely sweet-tasting protein, 100 000 times sweeter than sucrose on a molar basis [] found in berries from Thaumatococcus daniellii, a tropical flowering plant known as Katemfe, it is induced by attack by viroids, which are single-stranded unencapsulated RNA molecules that do not code for protein | Back alignment and domain information |
|---|
| >cd09215 Thaumatin-like the sweet-tasting protein, thaumatin, and thaumatin-like proteins involved in host defense | Back alignment and domain information |
|---|
| >cd09217 TLP-P thaumatin and allergenic/antifungal thaumatin-like proteins: plant homologs | Back alignment and domain information |
|---|
| >cd08961 GH64-TLP-SF glycoside hydrolase family 64 (beta-1,3-glucanases which produce specific pentasaccharide oligomers) and thaumatin-like proteins | Back alignment and domain information |
|---|
| >PF04681 Bys1: Blastomyces yeast-phase-specific protein; InterPro: IPR006771 The pathogenic dimorphic fungal organism Blastomyces dermatitidis exists as a budding yeast at 37 degrees C and as a mycelium at 25 degrees C | Back alignment and domain information |
|---|
| >cd09216 GH64-LPHase-like glycoside hydrolase family 64: laminaripentaose-producing, beta-1,3-glucanase (LPHase)-like | Back alignment and domain information |
|---|
| >cd09220 GH64-GluB-like glycoside hydrolase family 64: beta-1,3-glucanase B (GluB)-like | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 225 | ||||
| 1z3q_A | 200 | Resolution Of The Structure Of The Allergenic And A | 6e-91 | ||
| 4h8t_A | 198 | Structure Of Haze Forming Proteins In White Wines: | 1e-84 | ||
| 1pcv_A | 205 | Crystal Structure Of Osmotin, A Plant Antifungal Pr | 2e-79 | ||
| 2i0w_A | 207 | Crystal Structure Analysis Of Np24-I, A Thaumatin-L | 1e-78 | ||
| 1du5_A | 206 | The Crystal Structure Of Zeamatin. Length = 206 | 7e-74 | ||
| 1aun_A | 208 | Pathogenesis-Related Protein 5d From Nicotiana Taba | 4e-73 | ||
| 3aok_A | 207 | Crystal Structure Of Sweet-Tasting Protein Thaumati | 1e-68 | ||
| 1rqw_A | 207 | Thaumatin Structure At 1.05 A Resolution Length = 2 | 1e-67 | ||
| 1thv_A | 207 | The Structures Of Three Crystal Forms Of The Sweet | 6e-67 | ||
| 1kwn_A | 207 | 1.2 A Structure Of Thaumatin Crystallized In Gel Le | 2e-66 | ||
| 2blr_A | 206 | Thaumatin Before A High Dose X-Ray "burn" Length = | 2e-66 | ||
| 2d8o_A | 207 | Structure Of Vil-Thaumatin Length = 207 | 2e-65 | ||
| 2d8p_A | 207 | Structure Of Hyper-Vil-Thaumatin Length = 207 | 1e-64 | ||
| 2ahn_A | 222 | High Resolution Structure Of A Cherry Allergen Pru | 3e-38 | ||
| 3zs3_A | 222 | High Resolution Structure Of Mal D 2, The Thaumatin | 5e-36 | ||
| 3g7m_A | 151 | Structure Of The Thaumatin-Like Xylanase Inhibitor | 3e-16 |
| >pdb|1Z3Q|A Chain A, Resolution Of The Structure Of The Allergenic And Antifungal Banana Fruit Thaumatin-Like Protein At 1.7a Length = 200 | Back alignment and structure |
|
| >pdb|4H8T|A Chain A, Structure Of Haze Forming Proteins In White Wines: Vitis Vinifera Thaumatin-Like Proteins Length = 198 | Back alignment and structure |
| >pdb|1PCV|A Chain A, Crystal Structure Of Osmotin, A Plant Antifungal Protein Length = 205 | Back alignment and structure |
| >pdb|2I0W|A Chain A, Crystal Structure Analysis Of Np24-I, A Thaumatin-Like Protein Length = 207 | Back alignment and structure |
| >pdb|1DU5|A Chain A, The Crystal Structure Of Zeamatin. Length = 206 | Back alignment and structure |
| >pdb|1AUN|A Chain A, Pathogenesis-Related Protein 5d From Nicotiana Tabacum Length = 208 | Back alignment and structure |
| >pdb|3AOK|A Chain A, Crystal Structure Of Sweet-Tasting Protein Thaumatin Ii Length = 207 | Back alignment and structure |
| >pdb|1RQW|A Chain A, Thaumatin Structure At 1.05 A Resolution Length = 207 | Back alignment and structure |
| >pdb|1THV|A Chain A, The Structures Of Three Crystal Forms Of The Sweet Protein Thaumatin Length = 207 | Back alignment and structure |
| >pdb|1KWN|A Chain A, 1.2 A Structure Of Thaumatin Crystallized In Gel Length = 207 | Back alignment and structure |
| >pdb|2BLR|A Chain A, Thaumatin Before A High Dose X-Ray "burn" Length = 206 | Back alignment and structure |
| >pdb|2D8O|A Chain A, Structure Of Vil-Thaumatin Length = 207 | Back alignment and structure |
| >pdb|2D8P|A Chain A, Structure Of Hyper-Vil-Thaumatin Length = 207 | Back alignment and structure |
| >pdb|2AHN|A Chain A, High Resolution Structure Of A Cherry Allergen Pru Av 2 Length = 222 | Back alignment and structure |
| >pdb|3ZS3|A Chain A, High Resolution Structure Of Mal D 2, The Thaumatin Like Food Allergen From Apple Length = 222 | Back alignment and structure |
| >pdb|3G7M|A Chain A, Structure Of The Thaumatin-Like Xylanase Inhibitor Tlxi Length = 151 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 225 | |||
| 1du5_A | 206 | Zeamatin; beta sandwich, antifungal protein; 2.50A | 3e-74 | |
| 1z3q_A | 200 | Thaumatin-like protein; beta sandwich, antifungal | 1e-71 | |
| 1aun_A | 208 | PR-5D; antifungal protein, pathogenesis-related pr | 2e-67 | |
| 2vhk_A | 206 | Thaumatin-I; kinetics of crystallization, chiralit | 8e-67 | |
| 2ahn_A | 222 | Thaumatin-like protein; allergen; 1.30A {Prunus av | 1e-59 | |
| 3g7m_A | 151 | Xylanase inhibitor TL-XI; beta-sheets, xylan degra | 1e-33 |
| >1du5_A Zeamatin; beta sandwich, antifungal protein; 2.50A {Zea mays} SCOP: b.25.1.1 Length = 206 | Back alignment and structure |
|---|
Score = 222 bits (567), Expect = 3e-74
Identities = 134/206 (65%), Positives = 151/206 (73%), Gaps = 5/206 (2%)
Query: 25 ATFEIRNNCPFTVWAAAVP-GGGRQLIRGQTWTINVNPGTKQARIWARTKCTFNAEGRGR 83
A F + N CPFTVWAA+VP GGGRQL RG++W I GT ARIWART C F+A GRG
Sbjct: 1 AVFTVVNQCPFTVWAASVPVGGGRQLNRGESWRITAPAGTTAARIWARTGCKFDASGRGS 60
Query: 84 CETGDCNGLLQCQAYGAPPNTLAEYTLNQFNNLDFYDISLVDGFNVPMDFSPLSGIR-CR 142
C TGDC G+LQC YG PNTLAEY L QFNNLDF+DISL+DGFNVPM F P G R
Sbjct: 61 CRTGDCGGVLQCTGYGRAPNTLAEYALKQFNNLDFFDISLIDGFNVPMSFLPDGGSGCSR 120
Query: 143 GIRCAADITGQCPNELRAPGGCNNPCTVFKTDQYCCN---SGKCVPTNFSKFFKQRCPNA 199
G RCA D+ +CP ELR G CNN C VFK D+YCC + C PTN+S++FK +CP+A
Sbjct: 121 GPRCAVDVNARCPAELRQDGVCNNACPVFKKDEYCCVGSAANDCHPTNYSRYFKGQCPDA 180
Query: 200 YSYPKDDQTSTFTCPGGTNYKVTFCP 225
YSYPKDD TSTFTCP GTNYKV FCP
Sbjct: 181 YSYPKDDATSTFTCPAGTNYKVVFCP 206
|
| >1z3q_A Thaumatin-like protein; beta sandwich, antifungal protein; 1.70A {Musa acuminata} Length = 200 | Back alignment and structure |
|---|
| >1aun_A PR-5D; antifungal protein, pathogenesis-related protein, osmotin, thaumatin-like protein; 1.80A {Nicotiana tabacum} SCOP: b.25.1.1 PDB: 2i0w_A 1pcv_A Length = 208 | Back alignment and structure |
|---|
| >2vhk_A Thaumatin-I; kinetics of crystallization, chirality, temperature, microbatch, plant protein, sweet protein; HET: TLA; 0.94A {Thaumatococcus daniellii} PDB: 2blu_A* 2blr_A* 2wbz_A 3n02_A* 3n03_A* 2vhr_A* 1lr2_A* 1lr3_A* 1lxz_A* 1ly0_A* 1pp3_A 1thi_A 2oqn_A* 1kwn_A* 2vi1_A 2vi2_A* 2vi3_A* 2vi4_A* 2vu6_A 2vu7_A* ... Length = 206 | Back alignment and structure |
|---|
| >2ahn_A Thaumatin-like protein; allergen; 1.30A {Prunus avium} Length = 222 | Back alignment and structure |
|---|
| >3g7m_A Xylanase inhibitor TL-XI; beta-sheets, xylan degradation, hydrolase inhibitor; HET: GOL; 2.91A {Triticum aestivum} Length = 151 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 225 | |||
| 1z3q_A | 200 | Thaumatin-like protein; beta sandwich, antifungal | 100.0 | |
| 1aun_A | 208 | PR-5D; antifungal protein, pathogenesis-related pr | 100.0 | |
| 1du5_A | 206 | Zeamatin; beta sandwich, antifungal protein; 2.50A | 100.0 | |
| 2vhk_A | 206 | Thaumatin-I; kinetics of crystallization, chiralit | 100.0 | |
| 2ahn_A | 222 | Thaumatin-like protein; allergen; 1.30A {Prunus av | 100.0 | |
| 3g7m_A | 151 | Xylanase inhibitor TL-XI; beta-sheets, xylan degra | 100.0 | |
| 3gd0_A | 367 | Laminaripentaose-producing beta-1,3-guluase (lphas | 91.07 |
| >1z3q_A Thaumatin-like protein; beta sandwich, antifungal protein; 1.70A {Musa acuminata} | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-88 Score=574.89 Aligned_cols=200 Identities=79% Similarity=1.518 Sum_probs=194.6
Q ss_pred eEEEEEcCCCCceeeeeeCCCceeecCCCeEEEEcCCCCccceeeeecccccCCCCCcccccCCCCCceecccCCCCCcc
Q 027329 25 ATFEIRNNCPFTVWAAAVPGGGRQLIRGQTWTINVNPGTKQARIWARTKCTFNAEGRGRCETGDCNGLLQCQAYGAPPNT 104 (225)
Q Consensus 25 ~t~tv~N~C~~tVwp~~~p~~g~~L~~G~s~s~~~p~~w~sGriw~RtgCs~~~~g~~~C~TGdCgg~~~C~~~g~~paT 104 (225)
++|||+|||+|||||+++|++||+|+|||++++.+|++|++|||||||+|+||+.|+++|+||||+|.++|++.|+||+|
T Consensus 1 ~t~ti~N~C~~tVWp~~~p~gG~~L~~G~s~~~~~p~~w~~GRiWgRTgC~fd~~g~~~C~TGdCgg~l~C~g~g~pPaT 80 (200)
T 1z3q_A 1 ATFEIVNRCSYTVWAAAVPGGGRQLNQGQSWTINVNAGTTGGRIWGRTGCSFDGSGRGRCQTGDCGGVLSCTAYGNPPNT 80 (200)
T ss_dssp CEEEEEECSSSCEEEEEETTEEEEECTTCEEEEECCTTCCSEEEEEEEEEEECTTSBEEEEESCCTTBSSCSSCCCSSCC
T ss_pred CEEEEEeCCCCCeeceEeCCCCcccCCCCeEEEeCCCcccccceeccccCCCCCCCCccccccCcCCeeecCCCCCCCcc
Confidence 48999999999999999999999999999999999999977999999999999999999999999999999998899999
Q ss_pred eeeeeeccCCCcceeeecccCCcCCceeeeecCCCccccccccccccCCCCCCCCCCCCccCCccccCCCccccCCCCCC
Q 027329 105 LAEYTLNQFNNLDFYDISLVDGFNVPMDFSPLSGIRCRGIRCAADITGQCPNELRAPGGCNNPCTVFKTDQYCCNSGKCV 184 (225)
Q Consensus 105 laEftl~~~~~~d~YDVSlVdG~NlP~~i~p~~~~~C~~~~C~~dl~~~CP~~l~~~~gC~SaC~~~~~~~~CC~g~~C~ 184 (225)
||||+|++.+++|||||||||||||||+|+|+++ .|+.++|.+|||..||.|||+++||+|+|++|++|||||+|.+|+
T Consensus 81 LaEftL~~~~~~dfYDVSlVDGfNlP~~i~P~~g-~C~~~~C~~dln~~CP~~L~v~~gC~saC~af~~~~yCC~g~~C~ 159 (200)
T 1z3q_A 81 LAEFALNQFNNLDFFDISLVDGFNVPMDFSPTSG-GCRGIRCAADINGQCPGALKAPGGCNNPCTVFKTDQYCCNSGACS 159 (200)
T ss_dssp EEEEEEEETTTEEEEEEECTTCBSSCEEEEESSS-SSCCEEECSCHHHHCCTTTEETTEECCHHHHHCCHHHHCTTSCCC
T ss_pred eEEEEecCCCCCceeeeeeeccccCCeeeeeCCC-CCCccccccchhhhCCHHHcccCcccCcccccCCCcccCCCCCCC
Confidence 9999999877899999999999999999999875 499999999999999999999999999999999999999999999
Q ss_pred CchhHHHHHhhCCcccCCCCCCCCCceeeCCCCceEEEecC
Q 027329 185 PTNFSKFFKQRCPNAYSYPKDDQTSTFTCPGGTNYKVTFCP 225 (225)
Q Consensus 185 pt~ys~~fK~~CP~AYsya~Dd~tstftC~~~~~y~ItFCP 225 (225)
|++||++||++||+||||||||++|+|+|+++++|+|||||
T Consensus 160 pt~ys~~FK~~CP~AYsya~DD~tstftC~~~~~y~vtFCP 200 (200)
T 1z3q_A 160 PTDYSQFFKRNCPDAYSYPKDDQTTTFTCPGGTNYRVVFCP 200 (200)
T ss_dssp CCHHHHHHHHHCTTEECSTTCCSSCCEEEETTCCEEEEECC
T ss_pred chhHHHHHHhcCcccccCCCCCCCcCeECCCCCCEEEEeCC
Confidence 99999999999999999999999999999988999999998
|
| >1aun_A PR-5D; antifungal protein, pathogenesis-related protein, osmotin, thaumatin-like protein; 1.80A {Nicotiana tabacum} SCOP: b.25.1.1 PDB: 2i0w_A 1pcv_A | Back alignment and structure |
|---|
| >1du5_A Zeamatin; beta sandwich, antifungal protein; 2.50A {Zea mays} SCOP: b.25.1.1 | Back alignment and structure |
|---|
| >2vhk_A Thaumatin-I; kinetics of crystallization, chirality, temperature, microbatch, plant protein, sweet protein; HET: TLA; 0.94A {Thaumatococcus daniellii} PDB: 2blu_A* 2blr_A* 2wbz_A 3n02_A* 3n03_A* 2vhr_A* 1lr2_A* 1lr3_A* 1lxz_A* 1ly0_A* 1pp3_A 1thi_A 2oqn_A* 1kwn_A* 2vi1_A 2vi2_A* 2vi3_A* 2vi4_A* 2vu6_A 2vu7_A* ... | Back alignment and structure |
|---|
| >2ahn_A Thaumatin-like protein; allergen; 1.30A {Prunus avium} | Back alignment and structure |
|---|
| >3g7m_A Xylanase inhibitor TL-XI; beta-sheets, xylan degradation, hydrolase inhibitor; HET: GOL; 2.91A {Triticum aestivum} | Back alignment and structure |
|---|
| >3gd0_A Laminaripentaose-producing beta-1,3-guluase (lphase); glycoside hydrolase, 3- glucnase; 1.62A {Streptomyces matensis} PDB: 3gd9_A* | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 225 | ||||
| d1auna_ | 208 | b.25.1.1 (A:) Pathogenesis-related protein 5d {Com | 2e-89 | |
| d1du5a_ | 206 | b.25.1.1 (A:) Zeamatin {Maize (Zea mays) [TaxId: 4 | 1e-86 | |
| d1rqwa_ | 207 | b.25.1.1 (A:) Thaumatin {Ketemfe (Thaumatococcus d | 8e-84 |
| >d1auna_ b.25.1.1 (A:) Pathogenesis-related protein 5d {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} Length = 208 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Osmotin, thaumatin-like protein superfamily: Osmotin, thaumatin-like protein family: Osmotin, thaumatin-like protein domain: Pathogenesis-related protein 5d species: Common tobacco (Nicotiana tabacum) [TaxId: 4097]
Score = 260 bits (665), Expect = 2e-89
Identities = 129/205 (62%), Positives = 153/205 (74%), Gaps = 4/205 (1%)
Query: 25 ATFEIRNNCPFTVWAAAVP-GGGRQLIRGQTWTINVNPGTKQARIWARTKCTFNAEGRGR 83
FE+ NNCP+TVWAAA P GGGR+L RGQ+W PGTK ARIW RT C F+ GRG
Sbjct: 2 GVFEVHNNCPYTVWAAATPVGGGRRLERGQSWWFWAPPGTKMARIWGRTNCNFDGAGRGW 61
Query: 84 CETGDCNGLLQCQAYGAPPNTLAEYTLNQFNNLDFYDISLVDGFNVPMDFSPLSGI--RC 141
C+TGDC G+L+C+ +G PPNTLAEY LNQF+NLDF+DIS++DGFN+PM F P +C
Sbjct: 62 CQTGDCGGVLECKGWGKPPNTLAEYALNQFSNLDFWDISVIDGFNIPMSFGPTKPGPGKC 121
Query: 142 RGIRCAADITGQCPNELRAPGGCNNPCTVFKTDQYCCNSGKCVPTNFSKFFKQRCPNAYS 201
GI+C A+I G+CP LR PGGCNNPCT F QYCC G C PT S++FKQRCP+AYS
Sbjct: 122 HGIQCTANINGECPGSLRVPGGCNNPCTTFGGQQYCCTQGPCGPTELSRWFKQRCPDAYS 181
Query: 202 YPKDDQTSTFTCPGG-TNYKVTFCP 225
YP+DD TSTFTC T+YKV FCP
Sbjct: 182 YPQDDPTSTFTCTSWTTDYKVMFCP 206
|
| >d1du5a_ b.25.1.1 (A:) Zeamatin {Maize (Zea mays) [TaxId: 4577]} Length = 206 | Back information, alignment and structure |
|---|
| >d1rqwa_ b.25.1.1 (A:) Thaumatin {Ketemfe (Thaumatococcus daniellii) [TaxId: 4621]} Length = 207 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 225 | |||
| d1auna_ | 208 | Pathogenesis-related protein 5d {Common tobacco (N | 100.0 | |
| d1du5a_ | 206 | Zeamatin {Maize (Zea mays) [TaxId: 4577]} | 100.0 | |
| d1rqwa_ | 207 | Thaumatin {Ketemfe (Thaumatococcus daniellii) [Tax | 100.0 |
| >d1auna_ b.25.1.1 (A:) Pathogenesis-related protein 5d {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Osmotin, thaumatin-like protein superfamily: Osmotin, thaumatin-like protein family: Osmotin, thaumatin-like protein domain: Pathogenesis-related protein 5d species: Common tobacco (Nicotiana tabacum) [TaxId: 4097]
Probab=100.00 E-value=3.6e-85 Score=559.45 Aligned_cols=202 Identities=64% Similarity=1.337 Sum_probs=194.6
Q ss_pred ceEEEEEcCCCCceeeeeeC-CCceeecCCCeEEEEcCCCCccceeeeecccccCCCCCcccccCCCCCceecccCCCCC
Q 027329 24 GATFEIRNNCPFTVWAAAVP-GGGRQLIRGQTWTINVNPGTKQARIWARTKCTFNAEGRGRCETGDCNGLLQCQAYGAPP 102 (225)
Q Consensus 24 a~t~tv~N~C~~tVwp~~~p-~~g~~L~~G~s~s~~~p~~w~sGriw~RtgCs~~~~g~~~C~TGdCgg~~~C~~~g~~p 102 (225)
+++|||+|||+|||||+++| ++||+|+||+++++.+|++|++|||||||+|+||++|+++|+||||+|.++|++.|+||
T Consensus 1 ~~~fti~N~C~~TVWp~~~p~~gg~~L~~g~s~~~~~p~~~~~gRiW~RTgC~~d~~G~~~C~TGdCgg~l~C~~~G~pP 80 (208)
T d1auna_ 1 SGVFEVHNNCPYTVWAAATPVGGGRRLERGQSWWFWAPPGTKMARIWGRTNCNFDGAGRGWCQTGDCGGVLECKGWGKPP 80 (208)
T ss_dssp CCEEEEEECSSSCEEEEEETTTEEEEECTTCEEEEECCTTCCSEEEEEEEEEEECTTSBEEEEESCCTTBSSCSSCCCSS
T ss_pred CCEEEEEeCCCCCcccccccCCCCcccCCCCceEEECCCCCcccceeecCCCCcCCCCccceeccCcCCeEecCCCCCCC
Confidence 36899999999999999998 68999999999999999999889999999999999999999999999999999999999
Q ss_pred cceeeeeeccCCCcceeeecccCCcCCceeeeecCCC--ccccccccccccCCCCCCCCCCCCccCCccccCCCccccCC
Q 027329 103 NTLAEYTLNQFNNLDFYDISLVDGFNVPMDFSPLSGI--RCRGIRCAADITGQCPNELRAPGGCNNPCTVFKTDQYCCNS 180 (225)
Q Consensus 103 aTlaEftl~~~~~~d~YDVSlVdG~NlP~~i~p~~~~--~C~~~~C~~dl~~~CP~~l~~~~gC~SaC~~~~~~~~CC~g 180 (225)
+|||||||++.+++|||||||||||||||+|+|.+++ .|+.++|.+|||..||+||++++||+|+|.+|++|||||++
T Consensus 81 ~TlaEftl~~~~~~DfYDvSlVDGfNlP~~i~P~~~~~~~C~~~~C~~dln~~CP~~L~v~~~C~saC~~~~~~~~CCt~ 160 (208)
T d1auna_ 81 NTLAEYALNQFSNLDFWDISVIDGFNIPMSFGPTKPGPGKCHGIQCTANINGECPGSLRVPGGCNNPCTTFGGQQYCCTQ 160 (208)
T ss_dssp CCEEEEEEEEGGGEEEEEEECTTCBSSCEEEEESSCCSTTCSCEEECSCHHHHCCTTTEETTEECCHHHHTCSHHHHCTT
T ss_pred cceEEEEeccCCCcceeccccccccccceEEeccCCCCCCcCcccccCCccccCCHhhccCCCCccceeecCCCccccCC
Confidence 9999999998788999999999999999999998743 49999999999999999999999999999999999999999
Q ss_pred CCCCCchhHHHHHhhCCcccCCCCCCCCCceeeCCC-CceEEEecC
Q 027329 181 GKCVPTNFSKFFKQRCPNAYSYPKDDQTSTFTCPGG-TNYKVTFCP 225 (225)
Q Consensus 181 ~~C~pt~ys~~fK~~CP~AYsya~Dd~tstftC~~~-~~y~ItFCP 225 (225)
.+|+|++||++||++||+||||||||++|||||+++ ++|+|||||
T Consensus 161 ~~C~pt~ys~~FK~~CP~AYsYa~Dd~sstftC~~g~~~Y~VtFCP 206 (208)
T d1auna_ 161 GPCGPTELSRWFKQRCPDAYSYPQDDPTSTFTCTSWTTDYKVMFCP 206 (208)
T ss_dssp SCCCCCHHHHHHHHHCTTSBCSTTCCTTTCEEEETTSCCEEEEEST
T ss_pred CcCCCchHHHHHHhhCCcccccCcCCCCcceEcCCCCCCEEEEeCC
Confidence 999999999999999999999999999999999875 799999999
|
| >d1du5a_ b.25.1.1 (A:) Zeamatin {Maize (Zea mays) [TaxId: 4577]} | Back information, alignment and structure |
|---|
| >d1rqwa_ b.25.1.1 (A:) Thaumatin {Ketemfe (Thaumatococcus daniellii) [TaxId: 4621]} | Back information, alignment and structure |
|---|