Citrus Sinensis ID: 027360
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 224 | ||||||
| 224072751 | 230 | predicted protein [Populus trichocarpa] | 0.964 | 0.939 | 0.722 | 1e-87 | |
| 147861823 | 246 | hypothetical protein VITISV_028128 [Viti | 0.901 | 0.821 | 0.673 | 1e-77 | |
| 359483202 | 245 | PREDICTED: phosphatidylinositol-glycan b | 0.941 | 0.861 | 0.649 | 7e-77 | |
| 388518631 | 234 | unknown [Lotus japonicus] | 0.982 | 0.940 | 0.599 | 7e-70 | |
| 297844524 | 228 | predicted protein [Arabidopsis lyrata su | 0.991 | 0.973 | 0.526 | 2e-68 | |
| 449439749 | 225 | PREDICTED: uncharacterized protein C1450 | 0.995 | 0.991 | 0.602 | 7e-67 | |
| 30684686 | 226 | uncharacterized protein [Arabidopsis tha | 0.861 | 0.853 | 0.553 | 3e-59 | |
| 6587811 | 270 | ESTs gb|AI992787, gb|T20398 come from th | 0.861 | 0.714 | 0.553 | 1e-58 | |
| 115450487 | 218 | Os03g0129000 [Oryza sativa Japonica Grou | 0.946 | 0.972 | 0.531 | 2e-58 | |
| 357114242 | 218 | PREDICTED: uncharacterized protein C1450 | 0.857 | 0.880 | 0.586 | 5e-58 |
| >gi|224072751|ref|XP_002303863.1| predicted protein [Populus trichocarpa] gi|118482072|gb|ABK92967.1| unknown [Populus trichocarpa] gi|222841295|gb|EEE78842.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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Score = 328 bits (840), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 156/216 (72%), Positives = 180/216 (83%)
Query: 9 NPSQSVSPMQTFFIHLICGVGLAVGLWVAHNFYSISLISNPSRTLRLIWVTMCPLVILFY 68
N S+S+S Q F IHLI G+GLA+ LWVAHNFYSI+L+S+PS TLRLIW+ +VIL Y
Sbjct: 15 NLSKSISAPQAFLIHLISGLGLAISLWVAHNFYSINLVSHPSITLRLIWIVESAIVILIY 74
Query: 69 SCFRKNPEKCSYLKAVIRGVLALPIGALVNALGAIALGAPVGIQYFPKTVNWSLLMSLFT 128
S FR +P++CSYLKAV+RG+LALP+GALVNALGAIALGAPVGIQY PKT+NWSLLMS FT
Sbjct: 75 SRFRIDPQQCSYLKAVVRGILALPVGALVNALGAIALGAPVGIQYLPKTINWSLLMSSFT 134
Query: 129 FVPAASVFGSSWEDWRRIFAHTKPNASVDYMICLPAHGAVIGAWFGAWPMPLDWERPWQE 188
PAASVFGSSW W+RIFA TKPN ++YMIC+PAHGAVIG WFGAWPMPLDWERPWQE
Sbjct: 135 VAPAASVFGSSWTYWQRIFAQTKPNEPLEYMICIPAHGAVIGGWFGAWPMPLDWERPWQE 194
Query: 189 WPICVSYGAMAGYLITMVLSFVLVLARGGQQHPKAD 224
WPICV+YGAM GYL+ M+ S VLA G +Q K D
Sbjct: 195 WPICVTYGAMTGYLVGMLASSGFVLANGRRQRLKED 230
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Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|147861823|emb|CAN81085.1| hypothetical protein VITISV_028128 [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|359483202|ref|XP_003632919.1| PREDICTED: phosphatidylinositol-glycan biosynthesis class F protein-like [Vitis vinifera] gi|298204771|emb|CBI25269.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|388518631|gb|AFK47377.1| unknown [Lotus japonicus] | Back alignment and taxonomy information |
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| >gi|297844524|ref|XP_002890143.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297335985|gb|EFH66402.1| predicted protein [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
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| >gi|449439749|ref|XP_004137648.1| PREDICTED: uncharacterized protein C1450.15-like [Cucumis sativus] gi|449501593|ref|XP_004161410.1| PREDICTED: uncharacterized protein C1450.15-like [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|30684686|ref|NP_173056.2| uncharacterized protein [Arabidopsis thaliana] gi|26452689|dbj|BAC43427.1| unknown protein [Arabidopsis thaliana] gi|51968410|dbj|BAD42897.1| unnamed protein product [Arabidopsis thaliana] gi|51969050|dbj|BAD43217.1| unnamed protein product [Arabidopsis thaliana] gi|90568028|gb|ABD94084.1| At1g16040 [Arabidopsis thaliana] gi|332191282|gb|AEE29403.1| uncharacterized protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|6587811|gb|AAF18502.1|AC010924_15 ESTs gb|AI992787, gb|T20398 come from this gene [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|115450487|ref|NP_001048844.1| Os03g0129000 [Oryza sativa Japonica Group] gi|108705990|gb|ABF93785.1| Phospho-ethanolamine N-methyltransferase family protein, expressed [Oryza sativa Japonica Group] gi|113547315|dbj|BAF10758.1| Os03g0129000 [Oryza sativa Japonica Group] gi|215707237|dbj|BAG93697.1| unnamed protein product [Oryza sativa Japonica Group] gi|218192014|gb|EEC74441.1| hypothetical protein OsI_09832 [Oryza sativa Indica Group] gi|222624133|gb|EEE58265.1| hypothetical protein OsJ_09269 [Oryza sativa Japonica Group] | Back alignment and taxonomy information |
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| >gi|357114242|ref|XP_003558909.1| PREDICTED: uncharacterized protein C1450.15-like [Brachypodium distachyon] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 224 | ||||||
| TAIR|locus:2200467 | 226 | AT1G16040 "AT1G16040" [Arabido | 0.955 | 0.946 | 0.536 | 7.6e-64 | |
| POMBASE|SPCC1450.15 | 494 | SPCC1450.15 "pig-F/3-ketosphin | 0.732 | 0.331 | 0.372 | 1.1e-21 | |
| UNIPROTKB|Q07326 | 219 | PIGF "Phosphatidylinositol-gly | 0.812 | 0.831 | 0.276 | 3.6e-18 | |
| UNIPROTKB|F1MNK5 | 219 | PIGF "Uncharacterized protein" | 0.834 | 0.853 | 0.268 | 5.8e-18 | |
| DICTYBASE|DDB_G0284667 | 219 | pigF "phosphatidylinositol gly | 0.843 | 0.863 | 0.259 | 2e-17 | |
| UNIPROTKB|E2QUI1 | 219 | PIGF "Uncharacterized protein" | 0.834 | 0.853 | 0.268 | 5.3e-17 | |
| RGD|1584658 | 219 | Pigf "phosphatidylinositol gly | 0.468 | 0.479 | 0.358 | 1.1e-16 | |
| MGI|MGI:99462 | 219 | Pigf "phosphatidylinositol gly | 0.468 | 0.479 | 0.358 | 1.8e-16 | |
| UNIPROTKB|E1C2L3 | 218 | LOC100858021 "Uncharacterized | 0.687 | 0.706 | 0.298 | 3.7e-16 | |
| ZFIN|ZDB-GENE-040426-1801 | 219 | pigf "phosphatidylinositol gly | 0.593 | 0.607 | 0.303 | 1.1e-14 |
| TAIR|locus:2200467 AT1G16040 "AT1G16040" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 651 (234.2 bits), Expect = 7.6e-64, P = 7.6e-64
Identities = 117/218 (53%), Positives = 160/218 (73%)
Query: 1 MVKASTTENPSQSVS-PMQT---FFIHLICGVGLAVGLWVAHNFYSISLISNPSRTLRLI 56
M +A +NP SVS + T F +++I G+ L G V N YS+ LIS+P+ TLRL+
Sbjct: 1 MKEAKEKKNPEISVSITISTWGAFAVYVITGLFLIFGFHVVRNKYSVDLISDPTLTLRLL 60
Query: 57 WVTMCPLVILFYSCFRKNPEKCSYLKAVIRGVLALPIGALVNALGAIALGAPVGIQYFPK 116
W+ P+V++ YS FR+NPEKCSY +AV R ++ L GAL+NALGA++LGAP+G+Q K
Sbjct: 61 WIIEFPIVVIIYSLFRRNPEKCSYFRAVGRSLVGLIAGALINALGAVSLGAPIGMQSLSK 120
Query: 117 TVNWSLLMSLFTFVPAASVFGSSWEDWRRIFAHTKPNASVDYMICLPAHGAVIGAWFGAW 176
T++WS LMS+FT VPA +V G+SW DW RIFA KP +++M+ +PA+GA+IG WFGAW
Sbjct: 121 TIHWSFLMSVFTVVPATAVLGASWIDWHRIFASLKPIGIIEHMLLVPAYGAIIGGWFGAW 180
Query: 177 PMPLDWERPWQEWPICVSYGAMAGYLITMVLSFVLVLA 214
PMPLDWERPWQEWPICV YGA+ GY+ ++S + +L+
Sbjct: 181 PMPLDWERPWQEWPICVCYGAIGGYIGGQMVSLLTLLS 218
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| POMBASE|SPCC1450.15 SPCC1450.15 "pig-F/3-ketosphinganine reductase fusion protein (predicted)" [Schizosaccharomyces pombe (taxid:4896)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q07326 PIGF "Phosphatidylinositol-glycan biosynthesis class F protein" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
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| UNIPROTKB|F1MNK5 PIGF "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
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| DICTYBASE|DDB_G0284667 pigF "phosphatidylinositol glycan, class F" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
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| UNIPROTKB|E2QUI1 PIGF "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
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| RGD|1584658 Pigf "phosphatidylinositol glycan anchor biosynthesis, class F" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
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| MGI|MGI:99462 Pigf "phosphatidylinositol glycan anchor biosynthesis, class F" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
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| UNIPROTKB|E1C2L3 LOC100858021 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
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| ZFIN|ZDB-GENE-040426-1801 pigf "phosphatidylinositol glycan, class F" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 224 | |||
| pfam06699 | 190 | pfam06699, PIG-F, GPI biosynthesis protein family | 2e-58 |
| >gnl|CDD|219143 pfam06699, PIG-F, GPI biosynthesis protein family Pig-F | Back alignment and domain information |
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Score = 182 bits (465), Expect = 2e-58
Identities = 65/195 (33%), Positives = 102/195 (52%), Gaps = 12/195 (6%)
Query: 23 HLICGVGLAVGLWVAHNFYSISLISNPSRTLRLIWVTMCPLVILFYSCFRKNPEKCS--- 79
HLI + L + L+ +S L S+P TL + + + Y + NP S
Sbjct: 2 HLIPALLLFLFLFR----FSAGLTSDPYSTLLKSLPVL-IPLQVVYLYLQLNPATKSGNK 56
Query: 80 ---YLKAVIRGVLALPIGALVNALGAIALGAPVGIQYFPKTVNWSLLMSLFTFVPAASVF 136
L AVI +L+L + + + + GAP+ +++ +T +L +S+ TF P V
Sbjct: 57 KNVPLLAVISLLLSLLLSVPLLFVLLVLFGAPL-LEHLLETFLLALHLSVLTFPPLLCVL 115
Query: 137 GSSWEDWRRIFAHTKPNASVDYMICLPAHGAVIGAWFGAWPMPLDWERPWQEWPICVSYG 196
G ++ W+R+F+ P D I + A GAV+GAW GA P+PLDW+RPWQ+WPI + G
Sbjct: 116 GLDFKVWKRVFSADGPYDVFDNSILISALGAVVGAWLGAVPIPLDWDRPWQQWPITILVG 175
Query: 197 AMAGYLITMVLSFVL 211
A GY + +V+ L
Sbjct: 176 AYLGYFVGLVIGLTL 190
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PIG-F is involved in glycosylphosphatidylinositol (GPI) anchor biosynthesis. Length = 190 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 224 | |||
| PF06699 | 190 | PIG-F: GPI biosynthesis protein family Pig-F; Inte | 100.0 | |
| KOG3144 | 196 | consensus Ethanolamine-P-transferase GPI11/PIG-F, | 100.0 |
| >PF06699 PIG-F: GPI biosynthesis protein family Pig-F; InterPro: IPR009580 Glycosylphosphatidylinositol anchor biosynthesis protein Pig-F is involved in glycosylphosphatidylinositol (GPI) anchor biosynthesis [, , ] | Back alignment and domain information |
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Probab=100.00 E-value=1.8e-51 Score=352.73 Aligned_cols=168 Identities=34% Similarity=0.642 Sum_probs=148.8
Q ss_pred hcccccccChhHHHHHHHHHHHHHHHHhhHhhhcC------CCCcchHHHHHHhHhhhhHHHHHHHHHHHHhCCCccccc
Q 027360 40 FYSISLISNPSRTLRLIWVTMCPLVILFYSCFRKN------PEKCSYLKAVIRGVLALPIGALVNALGAIALGAPVGIQY 113 (224)
Q Consensus 40 ~~~~~Lv~dP~~tl~~~~~~~~piv~~~~s~~r~~------~k~~~~~~a~~~~ll~~~l~a~l~~~~~VLfGAP~~~~~ 113 (224)
.++.+|++||+.+|... ..+..+++++|.+++.+ +||++...++.+.++++++++.++|+++|+||||++ ++
T Consensus 14 ~~~~~l~~~~~~~L~~~-l~~~~~~q~~Y~~l~~~~~~~~~~kk~~~~~~~~~~~l~~~l~~~~~~~~~VLfGAP~~-~~ 91 (190)
T PF06699_consen 14 RFSAGLVSDPVSTLLKL-LPVLAVLQVVYSYLCLPAATSSGNKKNNPLLAILSLLLSLLLSTPVFHVILVLFGAPLL-SH 91 (190)
T ss_pred HHHhhccCCHHHHHHHH-HHHHHHHHHHHHheecCcccccccccccHHHHHHHHHHHHHHHHHHHHHHHeecChhHH-Hh
Confidence 45678999999999974 44444555666665432 224557788999999999999999999999999994 78
Q ss_pred hhHHHHHHHHHHHHHHhhhHhhcCCChHHHHHHHhccCCCc-chhhhhhhhhhhhhhhhhhcccccCCCCCCCCCccCch
Q 027360 114 FPKTVNWSLLMSLFTFVPAASVFGSSWEDWRRIFAHTKPNA-SVDYMICLPAHGAVIGAWFGAWPMPLDWERPWQEWPIC 192 (224)
Q Consensus 114 ~~~T~llal~lS~lt~~P~~~~~g~~~~~w~~vf~~~~p~~-~~e~~i~~~~~g~vlGaWlGA~pIPLDWDRpWQ~WPI~ 192 (224)
.+||++||+|||+++++|+.+++|.|.++|+|+|+..++.+ ..|+.++++++|+++|||+||+|||||||||||+||||
T Consensus 92 ~~~T~lla~~ls~lt~~P~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~g~~~GaWlGa~pIPLDWDRpWQ~WPi~ 171 (190)
T PF06699_consen 92 VEETFLLALHLSLLTVFPLAYVFGCDFQVWKRVFSLERPLDEIFENSLLYPAIGAVLGAWLGAVPIPLDWDRPWQAWPIT 171 (190)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHhcCCccchHHHHHHHHHHHHHHHHHHHcceeccCCCCCccccCChH
Confidence 99999999999999999999999999999999999999877 78899999999999999999999999999999999999
Q ss_pred hhcchhhHHHHHHHHHH
Q 027360 193 VSYGAMAGYLITMVLSF 209 (224)
Q Consensus 193 ~~~Ga~~G~~lG~~~s~ 209 (224)
|++|+++||++|++++.
T Consensus 172 ~~~Ga~~G~~~G~~~~~ 188 (190)
T PF06699_consen 172 CVVGAYLGYFVGSLIGS 188 (190)
T ss_pred HHHHHHHHHHHHHHhhc
Confidence 99999999999999875
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; GO: 0006506 GPI anchor biosynthetic process, 0005789 endoplasmic reticulum membrane, 0016021 integral to membrane |
| >KOG3144 consensus Ethanolamine-P-transferase GPI11/PIG-F, involved in glycosylphosphatidylinositol anchor biosynthesis [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
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Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
No hit with e-value below 0.005
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 224 | |||
| 2ks1_B | 44 | Epidermal growth factor receptor; ERBB1, ERBB2, tr | 86.97 |
| >2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens} | Back alignment and structure |
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Probab=86.97 E-value=1.1 Score=29.74 Aligned_cols=37 Identities=16% Similarity=0.034 Sum_probs=22.7
Q ss_pred CccCchhhcchhhHHHHHHH--HHHHHHHHhcCccCCCC
Q 027360 187 QEWPICVSYGAMAGYLITMV--LSFVLVLARGGQQHPKA 223 (224)
Q Consensus 187 Q~WPI~~~~Ga~~G~~lG~~--~s~~~~~~~~~~~~~k~ 223 (224)
|+.+.+-..|.++|.+++.+ ....++++|+||++-|+
T Consensus 6 ~~s~~~~IA~gVVgGv~~~~ii~~~~~~~~RRr~~~~kR 44 (44)
T 2ks1_B 6 NGPKIPSIATGMVGALLLLLVVALGIGLFMRRRHIVRKR 44 (44)
T ss_dssp CCSCSSSSTHHHHHHHHHHHHHHHHHHHHHHTTTCCSCC
T ss_pred CCCCcceEEeehhHHHHHHHHHHHHHHHHhhhhHhhccC
Confidence 45677777777777666633 33334566677666564
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Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00