Citrus Sinensis ID: 027360


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220----
MVKASTTENPSQSVSPMQTFFIHLICGVGLAVGLWVAHNFYSISLISNPSRTLRLIWVTMCPLVILFYSCFRKNPEKCSYLKAVIRGVLALPIGALVNALGAIALGAPVGIQYFPKTVNWSLLMSLFTFVPAASVFGSSWEDWRRIFAHTKPNASVDYMICLPAHGAVIGAWFGAWPMPLDWERPWQEWPICVSYGAMAGYLITMVLSFVLVLARGGQQHPKAD
ccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHEEEEEEEEccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHccEEEEcccHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccc
cccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccEcccHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHccccccccccccccccccEHHHHHHHHHHHHHHHHHHHHHHHccccccccc
mvkasttenpsqsvspmQTFFIHLICGVGLAVGLWVAHNFYsislisnpsrTLRLIWVTMCPLVILFYSCfrknpekcSYLKAVIRGVLALPIGALVNALGAialgapvgiqyfpktVNWSLLMSLFTFvpaasvfgsswEDWRRIFAhtkpnasvdYMICLPAHgavigawfgawpmpldwerpwqewpicvsYGAMAGYLITMVLSFVLVLArggqqhpkad
mvkasttenpsqsvspMQTFFIHLICGVGLAVGLWVAHNFYSISLISNPSRTLRLIWVTMCPLVILFYSCFRKNPEKCSYLKAVIRGVLALPIGALVNALGAIALGAPVGIQYFPKTVNWSLLMSLFTFVPAASVFGSSWEDWRRIFAHTKPNASVDYMICLPAHGAVIGAWFGAWPMPLDWERPWQEWPICVSYGAMAGYLITMVLSFVLVLARGgqqhpkad
MVKASTTENPSQSVSPMQTFFIHLICGVGLAVGLWVAHNFYSISLISNPSRTLRLIWVTMCPLVILFYSCFRKNPEKCSYLKAVIRGVLALPIGALVNALGAIALGAPVGIQYFPKTVNWSLLMSLFTFVPAASVFGSSWEDWRRIFAHTKPNASVDYMICLPAHGAVIGAWFGAWPMPLDWERPWQEWPICVSYGAMAGYLITMVLSFVLVLARGGQQHPKAD
*****************QTFFIHLICGVGLAVGLWVAHNFYSISLISNPSRTLRLIWVTMCPLVILFYSCFRKNPEKCSYLKAVIRGVLALPIGALVNALGAIALGAPVGIQYFPKTVNWSLLMSLFTFVPAASVFGSSWEDWRRIFAHTKPNASVDYMICLPAHGAVIGAWFGAWPMPLDWERPWQEWPICVSYGAMAGYLITMVLSFVLVLAR*********
*******************FFIHLICGVGLAVGLWVAHNFYSISLISNPSRTLRLIWVTMCPLVILFYSCFRKN****SYLKAVIRGVLALPIGALVNALGAIALGAPVGIQYFPKTVNWSLLMSLFTFVPAASVFGSSWEDWRRIFAHTKPNASVDYMICLPAHGAVIGAWFGAWPMPLDWERPWQEWPICVSYGAMAGYLITMVLSFVLVLARG*QQ*****
*************VSPMQTFFIHLICGVGLAVGLWVAHNFYSISLISNPSRTLRLIWVTMCPLVILFYSCFRKNPEKCSYLKAVIRGVLALPIGALVNALGAIALGAPVGIQYFPKTVNWSLLMSLFTFVPAASVFGSSWEDWRRIFAHTKPNASVDYMICLPAHGAVIGAWFGAWPMPLDWERPWQEWPICVSYGAMAGYLITMVLSFVLVLAR*********
**********SQSVSPMQTFFIHLICGVGLAVGLWVAHNFYSISLISNPSRTLRLIWVTMCPLVILFYSCFRKNPEKCSYLKAVIRGVLALPIGALVNALGAIALGAPVGIQYFPKTVNWSLLMSLFTFVPAASVFGSSWEDWRRIFAHTKPNASVDYMICLPAHGAVIGAWFGAWPMPLDWERPWQEWPICVSYGAMAGYLITMVLSFVLVLARGG*******
iiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiii
iiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSSSSSSSiiHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiii
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MVKASTTENPSQSVSPMQTFFIHLICGVGLAVGLWVAHNFYSISLISNPSRTLRLIWVTMCPLVILFYSCFRKNPEKCSYLKAVIRGVLALPIGALVNALGAIALGAPVGIQYFPKTVNWSLLMSLFTFVPAASVFGSSWEDWRRIFAHTKPNASVDYMICLPAHGAVIGAWFGAWPMPLDWERPWQEWPICVSYGAMAGYLITMVLSFVLVLARGGQQHPKAD
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query224 2.2.26 [Sep-21-2011]
Q9Y7P2494 Uncharacterized protein C yes no 0.709 0.321 0.364 6e-19
O09101219 Phosphatidylinositol-glyc yes no 0.455 0.465 0.368 8e-14
Q07326219 Phosphatidylinositol-glyc yes no 0.825 0.844 0.272 9e-14
P0C148264 Glycosylphosphatidylinosi N/A no 0.508 0.431 0.365 2e-10
Q6BHK4236 Glycosylphosphatidylinosi yes no 0.593 0.563 0.335 4e-09
Q6C741223 Glycosylphosphatidylinosi yes no 0.477 0.479 0.324 7e-09
Q871U9272 Glycosylphosphatidylinosi N/A no 0.370 0.305 0.348 1e-08
Q5AFT2265 Glycosylphosphatidylinosi N/A no 0.410 0.347 0.318 6e-08
Q4WIQ0297 Glycosylphosphatidylinosi yes no 0.446 0.336 0.352 8e-08
Q4HXT5255 Glycosylphosphatidylinosi yes no 0.169 0.149 0.526 2e-07
>sp|Q9Y7P2|YCKF_SCHPO Uncharacterized protein C1450.15 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC1450.15 PE=3 SV=2 Back     alignment and function desciption
 Score = 94.4 bits (233), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 62/170 (36%), Positives = 92/170 (54%), Gaps = 11/170 (6%)

Query: 45  LISNPSRTLRL---IWVTMCPLVILFYSCFRKNPEKCSYLKAVIRGVLALPIGALVNALG 101
           LI NP R LR    IW  M  L I     + ++P      K ++ G  ++ IG+L+ +  
Sbjct: 332 LIENPYRMLRNTFPIWFIMQTLQI-----YIQSPRPPLTPKRLLAGAASMLIGSLLISFI 386

Query: 102 AIALGAPVGIQYFPKTVNWSLLMSLFTFVPAASVFGSSWEDWRRIFAHTKPNASVDYMIC 161
            +A GAP+ +  F  T   +L +S+FT  P AS    + E W+R    T  + +V   + 
Sbjct: 387 LVAFGAPL-LHDFHLTYFCALTLSVFTVYPLASTLAFNTEQWQRFL--TLKSFNVIGSMQ 443

Query: 162 LPAHGAVIGAWFGAWPMPLDWERPWQEWPICVSYGAMAGYLITMVLSFVL 211
           L + G +IGAWFGA+P+PLDW+RPWQ WPI +  GA  GY    ++  +L
Sbjct: 444 LRSWGPIIGAWFGAFPIPLDWDRPWQAWPITIVIGAFLGYAFAAIVGEIL 493





Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)
>sp|O09101|PIGF_MOUSE Phosphatidylinositol-glycan biosynthesis class F protein OS=Mus musculus GN=Pigf PE=1 SV=1 Back     alignment and function description
>sp|Q07326|PIGF_HUMAN Phosphatidylinositol-glycan biosynthesis class F protein OS=Homo sapiens GN=PIGF PE=1 SV=1 Back     alignment and function description
>sp|P0C148|GPI11_MAGO7 Glycosylphosphatidylinositol anchor biosynthesis protein 11 OS=Magnaporthe oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) GN=GPI11 PE=3 SV=2 Back     alignment and function description
>sp|Q6BHK4|GPI11_DEBHA Glycosylphosphatidylinositol anchor biosynthesis protein 11 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=GPI11 PE=3 SV=2 Back     alignment and function description
>sp|Q6C741|GPI11_YARLI Glycosylphosphatidylinositol anchor biosynthesis protein 11 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=GPI11 PE=3 SV=1 Back     alignment and function description
>sp|Q871U9|GPI11_NEUCR Glycosylphosphatidylinositol anchor biosynthesis protein 11 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=gpi-11 PE=3 SV=1 Back     alignment and function description
>sp|Q5AFT2|GPI11_CANAL Glycosylphosphatidylinositol anchor biosynthesis protein 11 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=GPI11 PE=3 SV=1 Back     alignment and function description
>sp|Q4WIQ0|GPI11_ASPFU Glycosylphosphatidylinositol anchor biosynthesis protein 11 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=gpi11 PE=3 SV=1 Back     alignment and function description
>sp|Q4HXT5|GPI11_GIBZE Glycosylphosphatidylinositol anchor biosynthesis protein 11 OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=GPI11 PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query224
224072751230 predicted protein [Populus trichocarpa] 0.964 0.939 0.722 1e-87
147861823246 hypothetical protein VITISV_028128 [Viti 0.901 0.821 0.673 1e-77
359483202245 PREDICTED: phosphatidylinositol-glycan b 0.941 0.861 0.649 7e-77
388518631234 unknown [Lotus japonicus] 0.982 0.940 0.599 7e-70
297844524228 predicted protein [Arabidopsis lyrata su 0.991 0.973 0.526 2e-68
449439749225 PREDICTED: uncharacterized protein C1450 0.995 0.991 0.602 7e-67
30684686226 uncharacterized protein [Arabidopsis tha 0.861 0.853 0.553 3e-59
6587811270 ESTs gb|AI992787, gb|T20398 come from th 0.861 0.714 0.553 1e-58
115450487218 Os03g0129000 [Oryza sativa Japonica Grou 0.946 0.972 0.531 2e-58
357114242218 PREDICTED: uncharacterized protein C1450 0.857 0.880 0.586 5e-58
>gi|224072751|ref|XP_002303863.1| predicted protein [Populus trichocarpa] gi|118482072|gb|ABK92967.1| unknown [Populus trichocarpa] gi|222841295|gb|EEE78842.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  328 bits (840), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 156/216 (72%), Positives = 180/216 (83%)

Query: 9   NPSQSVSPMQTFFIHLICGVGLAVGLWVAHNFYSISLISNPSRTLRLIWVTMCPLVILFY 68
           N S+S+S  Q F IHLI G+GLA+ LWVAHNFYSI+L+S+PS TLRLIW+    +VIL Y
Sbjct: 15  NLSKSISAPQAFLIHLISGLGLAISLWVAHNFYSINLVSHPSITLRLIWIVESAIVILIY 74

Query: 69  SCFRKNPEKCSYLKAVIRGVLALPIGALVNALGAIALGAPVGIQYFPKTVNWSLLMSLFT 128
           S FR +P++CSYLKAV+RG+LALP+GALVNALGAIALGAPVGIQY PKT+NWSLLMS FT
Sbjct: 75  SRFRIDPQQCSYLKAVVRGILALPVGALVNALGAIALGAPVGIQYLPKTINWSLLMSSFT 134

Query: 129 FVPAASVFGSSWEDWRRIFAHTKPNASVDYMICLPAHGAVIGAWFGAWPMPLDWERPWQE 188
             PAASVFGSSW  W+RIFA TKPN  ++YMIC+PAHGAVIG WFGAWPMPLDWERPWQE
Sbjct: 135 VAPAASVFGSSWTYWQRIFAQTKPNEPLEYMICIPAHGAVIGGWFGAWPMPLDWERPWQE 194

Query: 189 WPICVSYGAMAGYLITMVLSFVLVLARGGQQHPKAD 224
           WPICV+YGAM GYL+ M+ S   VLA G +Q  K D
Sbjct: 195 WPICVTYGAMTGYLVGMLASSGFVLANGRRQRLKED 230




Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147861823|emb|CAN81085.1| hypothetical protein VITISV_028128 [Vitis vinifera] Back     alignment and taxonomy information
>gi|359483202|ref|XP_003632919.1| PREDICTED: phosphatidylinositol-glycan biosynthesis class F protein-like [Vitis vinifera] gi|298204771|emb|CBI25269.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|388518631|gb|AFK47377.1| unknown [Lotus japonicus] Back     alignment and taxonomy information
>gi|297844524|ref|XP_002890143.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297335985|gb|EFH66402.1| predicted protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|449439749|ref|XP_004137648.1| PREDICTED: uncharacterized protein C1450.15-like [Cucumis sativus] gi|449501593|ref|XP_004161410.1| PREDICTED: uncharacterized protein C1450.15-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|30684686|ref|NP_173056.2| uncharacterized protein [Arabidopsis thaliana] gi|26452689|dbj|BAC43427.1| unknown protein [Arabidopsis thaliana] gi|51968410|dbj|BAD42897.1| unnamed protein product [Arabidopsis thaliana] gi|51969050|dbj|BAD43217.1| unnamed protein product [Arabidopsis thaliana] gi|90568028|gb|ABD94084.1| At1g16040 [Arabidopsis thaliana] gi|332191282|gb|AEE29403.1| uncharacterized protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|6587811|gb|AAF18502.1|AC010924_15 ESTs gb|AI992787, gb|T20398 come from this gene [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|115450487|ref|NP_001048844.1| Os03g0129000 [Oryza sativa Japonica Group] gi|108705990|gb|ABF93785.1| Phospho-ethanolamine N-methyltransferase family protein, expressed [Oryza sativa Japonica Group] gi|113547315|dbj|BAF10758.1| Os03g0129000 [Oryza sativa Japonica Group] gi|215707237|dbj|BAG93697.1| unnamed protein product [Oryza sativa Japonica Group] gi|218192014|gb|EEC74441.1| hypothetical protein OsI_09832 [Oryza sativa Indica Group] gi|222624133|gb|EEE58265.1| hypothetical protein OsJ_09269 [Oryza sativa Japonica Group] Back     alignment and taxonomy information
>gi|357114242|ref|XP_003558909.1| PREDICTED: uncharacterized protein C1450.15-like [Brachypodium distachyon] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query224
TAIR|locus:2200467226 AT1G16040 "AT1G16040" [Arabido 0.955 0.946 0.536 7.6e-64
POMBASE|SPCC1450.15494 SPCC1450.15 "pig-F/3-ketosphin 0.732 0.331 0.372 1.1e-21
UNIPROTKB|Q07326219 PIGF "Phosphatidylinositol-gly 0.812 0.831 0.276 3.6e-18
UNIPROTKB|F1MNK5219 PIGF "Uncharacterized protein" 0.834 0.853 0.268 5.8e-18
DICTYBASE|DDB_G0284667219 pigF "phosphatidylinositol gly 0.843 0.863 0.259 2e-17
UNIPROTKB|E2QUI1219 PIGF "Uncharacterized protein" 0.834 0.853 0.268 5.3e-17
RGD|1584658219 Pigf "phosphatidylinositol gly 0.468 0.479 0.358 1.1e-16
MGI|MGI:99462219 Pigf "phosphatidylinositol gly 0.468 0.479 0.358 1.8e-16
UNIPROTKB|E1C2L3218 LOC100858021 "Uncharacterized 0.687 0.706 0.298 3.7e-16
ZFIN|ZDB-GENE-040426-1801219 pigf "phosphatidylinositol gly 0.593 0.607 0.303 1.1e-14
TAIR|locus:2200467 AT1G16040 "AT1G16040" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 651 (234.2 bits), Expect = 7.6e-64, P = 7.6e-64
 Identities = 117/218 (53%), Positives = 160/218 (73%)

Query:     1 MVKASTTENPSQSVS-PMQT---FFIHLICGVGLAVGLWVAHNFYSISLISNPSRTLRLI 56
             M +A   +NP  SVS  + T   F +++I G+ L  G  V  N YS+ LIS+P+ TLRL+
Sbjct:     1 MKEAKEKKNPEISVSITISTWGAFAVYVITGLFLIFGFHVVRNKYSVDLISDPTLTLRLL 60

Query:    57 WVTMCPLVILFYSCFRKNPEKCSYLKAVIRGVLALPIGALVNALGAIALGAPVGIQYFPK 116
             W+   P+V++ YS FR+NPEKCSY +AV R ++ L  GAL+NALGA++LGAP+G+Q   K
Sbjct:    61 WIIEFPIVVIIYSLFRRNPEKCSYFRAVGRSLVGLIAGALINALGAVSLGAPIGMQSLSK 120

Query:   117 TVNWSLLMSLFTFVPAASVFGSSWEDWRRIFAHTKPNASVDYMICLPAHGAVIGAWFGAW 176
             T++WS LMS+FT VPA +V G+SW DW RIFA  KP   +++M+ +PA+GA+IG WFGAW
Sbjct:   121 TIHWSFLMSVFTVVPATAVLGASWIDWHRIFASLKPIGIIEHMLLVPAYGAIIGGWFGAW 180

Query:   177 PMPLDWERPWQEWPICVSYGAMAGYLITMVLSFVLVLA 214
             PMPLDWERPWQEWPICV YGA+ GY+   ++S + +L+
Sbjct:   181 PMPLDWERPWQEWPICVCYGAIGGYIGGQMVSLLTLLS 218




GO:0003674 "molecular_function" evidence=ND
GO:0005789 "endoplasmic reticulum membrane" evidence=IEA
GO:0006506 "GPI anchor biosynthetic process" evidence=IEA
GO:0009507 "chloroplast" evidence=ISM
GO:0016021 "integral to membrane" evidence=IEA
POMBASE|SPCC1450.15 SPCC1450.15 "pig-F/3-ketosphinganine reductase fusion protein (predicted)" [Schizosaccharomyces pombe (taxid:4896)] Back     alignment and assigned GO terms
UNIPROTKB|Q07326 PIGF "Phosphatidylinositol-glycan biosynthesis class F protein" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|F1MNK5 PIGF "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0284667 pigF "phosphatidylinositol glycan, class F" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
UNIPROTKB|E2QUI1 PIGF "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
RGD|1584658 Pigf "phosphatidylinositol glycan anchor biosynthesis, class F" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
MGI|MGI:99462 Pigf "phosphatidylinositol glycan anchor biosynthesis, class F" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|E1C2L3 LOC100858021 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-040426-1801 pigf "phosphatidylinositol glycan, class F" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query224
pfam06699190 pfam06699, PIG-F, GPI biosynthesis protein family 2e-58
>gnl|CDD|219143 pfam06699, PIG-F, GPI biosynthesis protein family Pig-F Back     alignment and domain information
 Score =  182 bits (465), Expect = 2e-58
 Identities = 65/195 (33%), Positives = 102/195 (52%), Gaps = 12/195 (6%)

Query: 23  HLICGVGLAVGLWVAHNFYSISLISNPSRTLRLIWVTMCPLVILFYSCFRKNPEKCS--- 79
           HLI  + L + L+     +S  L S+P  TL      +   + + Y   + NP   S   
Sbjct: 2   HLIPALLLFLFLFR----FSAGLTSDPYSTLLKSLPVL-IPLQVVYLYLQLNPATKSGNK 56

Query: 80  ---YLKAVIRGVLALPIGALVNALGAIALGAPVGIQYFPKTVNWSLLMSLFTFVPAASVF 136
               L AVI  +L+L +   +  +  +  GAP+ +++  +T   +L +S+ TF P   V 
Sbjct: 57  KNVPLLAVISLLLSLLLSVPLLFVLLVLFGAPL-LEHLLETFLLALHLSVLTFPPLLCVL 115

Query: 137 GSSWEDWRRIFAHTKPNASVDYMICLPAHGAVIGAWFGAWPMPLDWERPWQEWPICVSYG 196
           G  ++ W+R+F+   P    D  I + A GAV+GAW GA P+PLDW+RPWQ+WPI +  G
Sbjct: 116 GLDFKVWKRVFSADGPYDVFDNSILISALGAVVGAWLGAVPIPLDWDRPWQQWPITILVG 175

Query: 197 AMAGYLITMVLSFVL 211
           A  GY + +V+   L
Sbjct: 176 AYLGYFVGLVIGLTL 190


PIG-F is involved in glycosylphosphatidylinositol (GPI) anchor biosynthesis. Length = 190

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 224
PF06699190 PIG-F: GPI biosynthesis protein family Pig-F; Inte 100.0
KOG3144196 consensus Ethanolamine-P-transferase GPI11/PIG-F, 100.0
>PF06699 PIG-F: GPI biosynthesis protein family Pig-F; InterPro: IPR009580 Glycosylphosphatidylinositol anchor biosynthesis protein Pig-F is involved in glycosylphosphatidylinositol (GPI) anchor biosynthesis [, , ] Back     alignment and domain information
Probab=100.00  E-value=1.8e-51  Score=352.73  Aligned_cols=168  Identities=34%  Similarity=0.642  Sum_probs=148.8

Q ss_pred             hcccccccChhHHHHHHHHHHHHHHHHhhHhhhcC------CCCcchHHHHHHhHhhhhHHHHHHHHHHHHhCCCccccc
Q 027360           40 FYSISLISNPSRTLRLIWVTMCPLVILFYSCFRKN------PEKCSYLKAVIRGVLALPIGALVNALGAIALGAPVGIQY  113 (224)
Q Consensus        40 ~~~~~Lv~dP~~tl~~~~~~~~piv~~~~s~~r~~------~k~~~~~~a~~~~ll~~~l~a~l~~~~~VLfGAP~~~~~  113 (224)
                      .++.+|++||+.+|... ..+..+++++|.+++.+      +||++...++.+.++++++++.++|+++|+||||++ ++
T Consensus        14 ~~~~~l~~~~~~~L~~~-l~~~~~~q~~Y~~l~~~~~~~~~~kk~~~~~~~~~~~l~~~l~~~~~~~~~VLfGAP~~-~~   91 (190)
T PF06699_consen   14 RFSAGLVSDPVSTLLKL-LPVLAVLQVVYSYLCLPAATSSGNKKNNPLLAILSLLLSLLLSTPVFHVILVLFGAPLL-SH   91 (190)
T ss_pred             HHHhhccCCHHHHHHHH-HHHHHHHHHHHHheecCcccccccccccHHHHHHHHHHHHHHHHHHHHHHHeecChhHH-Hh
Confidence            45678999999999974 44444555666665432      224557788999999999999999999999999994 78


Q ss_pred             hhHHHHHHHHHHHHHHhhhHhhcCCChHHHHHHHhccCCCc-chhhhhhhhhhhhhhhhhhcccccCCCCCCCCCccCch
Q 027360          114 FPKTVNWSLLMSLFTFVPAASVFGSSWEDWRRIFAHTKPNA-SVDYMICLPAHGAVIGAWFGAWPMPLDWERPWQEWPIC  192 (224)
Q Consensus       114 ~~~T~llal~lS~lt~~P~~~~~g~~~~~w~~vf~~~~p~~-~~e~~i~~~~~g~vlGaWlGA~pIPLDWDRpWQ~WPI~  192 (224)
                      .+||++||+|||+++++|+.+++|.|.++|+|+|+..++.+ ..|+.++++++|+++|||+||+|||||||||||+||||
T Consensus        92 ~~~T~lla~~ls~lt~~P~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~g~~~GaWlGa~pIPLDWDRpWQ~WPi~  171 (190)
T PF06699_consen   92 VEETFLLALHLSLLTVFPLAYVFGCDFQVWKRVFSLERPLDEIFENSLLYPAIGAVLGAWLGAVPIPLDWDRPWQAWPIT  171 (190)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHhcCCccchHHHHHHHHHHHHHHHHHHHcceeccCCCCCccccCChH
Confidence            99999999999999999999999999999999999999877 78899999999999999999999999999999999999


Q ss_pred             hhcchhhHHHHHHHHHH
Q 027360          193 VSYGAMAGYLITMVLSF  209 (224)
Q Consensus       193 ~~~Ga~~G~~lG~~~s~  209 (224)
                      |++|+++||++|++++.
T Consensus       172 ~~~Ga~~G~~~G~~~~~  188 (190)
T PF06699_consen  172 CVVGAYLGYFVGSLIGS  188 (190)
T ss_pred             HHHHHHHHHHHHHHhhc
Confidence            99999999999999875



; GO: 0006506 GPI anchor biosynthetic process, 0005789 endoplasmic reticulum membrane, 0016021 integral to membrane

>KOG3144 consensus Ethanolamine-P-transferase GPI11/PIG-F, involved in glycosylphosphatidylinositol anchor biosynthesis [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query224
2ks1_B44 Epidermal growth factor receptor; ERBB1, ERBB2, tr 86.97
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens} Back     alignment and structure
Probab=86.97  E-value=1.1  Score=29.74  Aligned_cols=37  Identities=16%  Similarity=0.034  Sum_probs=22.7

Q ss_pred             CccCchhhcchhhHHHHHHH--HHHHHHHHhcCccCCCC
Q 027360          187 QEWPICVSYGAMAGYLITMV--LSFVLVLARGGQQHPKA  223 (224)
Q Consensus       187 Q~WPI~~~~Ga~~G~~lG~~--~s~~~~~~~~~~~~~k~  223 (224)
                      |+.+.+-..|.++|.+++.+  ....++++|+||++-|+
T Consensus         6 ~~s~~~~IA~gVVgGv~~~~ii~~~~~~~~RRr~~~~kR   44 (44)
T 2ks1_B            6 NGPKIPSIATGMVGALLLLLVVALGIGLFMRRRHIVRKR   44 (44)
T ss_dssp             CCSCSSSSTHHHHHHHHHHHHHHHHHHHHHHTTTCCSCC
T ss_pred             CCCCcceEEeehhHHHHHHHHHHHHHHHHhhhhHhhccC
Confidence            45677777777777666633  33334566677666564




Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00