Citrus Sinensis ID: 027365

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220----
Protein Sequence
MEKIAVMSVRSIRRAACVRSSIIAAANNHHLRHLSSSRSLFSLSSPAASIPSKSIPFDCRSSLVMSIGCNRSFSEDVAHMPVIRDPEIQRAFKDLMAADWGELPASVIHDAKSALSRNNDDKAGQEVLKNVFSAAEAVEEFIGIIMNIKMEFDDEIGLSVYQRYATYLDAFGPDESYLRKKVETELGSKMIFLKMRCAGLGSEWGKVTVLGTSGLAGSYVEQRA
Secondary Structure (PSIPRED)
cccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccHHccccccccccccccccccccHHHHHHHHHHHHcccccccHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHccccHHHHHHHHHHHHcHHHHHHHHHHcccccccccEEEEEccccccccHHHcc
Secondary Structure Prediction (SSPRO)
cccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHcccccccccccccccHHcccccEHHcccccccccccccccccccHHHHHHHHHHHHccHHHccHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHccHEEEEEEEcccccccccEEEEEEcccccccEEEEcc
Coil and Loop (DISEMBL)
MEKIAVMSVRSIRRAACVRSSIIAAANNHhlrhlsssrslfslsspaasipsksipfdcrSSLVmsigcnrsfsedvahmpvirdpEIQRAFKDLMAadwgelpasvIHDAKsalsrnnddkAGQEVLKNVFSAAEAVEEFIGIIMNIKmefddeigLSVYQRYATYldafgpdesylRKKVETELGSKMIFLKMRCaglgsewgkVTVLGTsglagsyveqra
Flexible Loop (DISEMBL)
MEKIAVMSVRSIRRAACVRSSIIAAANNHHLRHLSSSRSLFSLSSPAASIPSKSIPFDCRSSLVMSIGCNRSFSEDVAHMPVIRDPEIQRAFKDLMAADWGELPASVIHDAKSALSRNNDDKAGQEVLKNVFSAAEAVEEFIGIIMNIKMEFDDEIGLSVYQRYATYLdafgpdesylRKKVETELGSKMIFLKMRCAGLGSEWGKVTVLgtsglagsyveqra
Low Complexity Region (SEG)
MEKIAVMSVRSIRRAACVRSSIIAAANNHhlrhlsssrslfslsspaasipsksipfDCRSSLVMSIGCNRSFSEDVAHMPVIRDPEIQRAFKDLMAADWGELPASVIHDAKSALSRNNDDKAGQEVLKNVFSAAEAVEEFIGIIMNIKMEFDDEIGLSVYQRYATYLDAFGPDESYLRKKVETELGSKMIFLKMRCAGLGSEWGKVTVLGTSGLAGSYVEQRA
Disordered region (IsUnstruct)
******MSVRSIRRAACVRSSIIAAANNHHL***********************IPFDCRSSLVMSIGCNRSFSEDVAHMPVIRDPEIQRAFKDLMAADWGELPASVIH*****************VLKNVFSAAEAVEEFIGIIMNIKMEFDDEIGLSVYQRYATYLDAFGPDESYLRKKVETELGSKMIFLKMRCAGLGSEWGKVTVLGTSGLAG*******
Disordered Region (DISOPRED)
********VRSIRRAACVRSSIIAAANNHHLRHLSSSRS*******************CRSSLVMSIGCNRSFSEDVAHMPVIRDPEIQRAFKDLMAADWGELPASVIHDA**************EVLKNVFSAAEAVEEFIGIIMNIKMEFDDEIGLSVYQRYATYLDAFGPDESYLRKKVETELGSKMIFLKMRCAGLGSEWGKVTVLGTSGLAGSYV****
Disordered Region (DISEMBL)
********VRSIRRAACVRSSIIAAANNHHLRHLSSSRSLFSLSSPAASIPSKSIPFDCRSSLVMSIGCNRSFSEDVAHMPVIRDPEIQRAFKDLMAADWGELPASVIHDAKSALSRNNDDKAGQEVLKNVFSAAEAVEEFIGIIMNIKMEFDDEIGLSVYQRYATYLDAFGPDESYLRKKVETELGSKMIFLKMRCAGLGSEWGKVTVLGTSGLAGSYVEQRA
Disordered Region (DISPRO)
****AVMSVRSIRRAACVRSSIIAAANNHHLRHLSSSRSLFSLSSPAASIPSKSIPFDCRSSLVMSIGCNRSFSEDVAHMPVIRDPEIQRAFKDLMAADWGELPASVIHDAKSALSRNNDDKAGQEVLKNVFSAAEAVEEFIGIIMNIKMEFDDEIGLSVYQRYATYLDAFGPDESYLRKKVETELGSKMIFLKMRCAGLGSEWGKVTVLGTSGLAGSYVEQR*
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MEKIAVMSVRSIRRAACVRSSIIAAANNHHLRHLSSSRSLFSLSSPAASIPSKSIPFDCRSSLVMSIGCNRSFSEDVAHMPVIRDPEIQRAFKDLMAADWGELPASVIHDAKSALSRNNDDKAGQEVLKNVFSAAEAVEEFIGIIMNIKMEFDDEIGLSVYQRYATYLDAFGPDESYLRKKVETELGSKMIFLKMRCAGLGSEWGKVTVLGTSGLAGSYVEQRA
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	224	2.2.26 [Sep-21-2011]
Q9SX77	257	Uncharacterized protein A	yes	no	0.879	0.766	0.565	8e-66

>sp|Q9SX77|UMP6_ARATH Uncharacterized protein At1g47420, mitochondrial OS=Arabidopsis thaliana GN=At1g47420 PE=1 SV=1

 Score =  249 bits (637), Expect = 8e-66,   Method: Compositional matrix adjust.
 Identities = 129/228 (56%), Positives = 158/228 (69%), Gaps = 31/228 (13%)

Query: 27  NNHHL-RHLSSSRSLFSLSSPAAS------------IPSKSIPFDCRSSLVMSIGCNRSF 73
            +HH+ +HLS  R+L +++ P AS            I   S+  D +    M +G  R F
Sbjct: 31  GSHHIEKHLSRHRTLITVA-PNASVIGDVQINKGSFISYASVSRDLQYPRAMGMGQVRRF 89

Query: 74  SEDVAHMPVIRDPEIQRAFKDLMAADWGELPASVIHDAKSALSRNNDDKAGQEVLKNVFS 133
           SEDV+HMP + D ++  AFKDLMAADW ELP++V+ DAK+A+S+N DDKAGQE LKNVF 
Sbjct: 90  SEDVSHMPEMEDSDVLNAFKDLMAADWAELPSAVVKDAKTAISKNTDDKAGQEALKNVFR 149

Query: 134 AAEAVEEFIGIIMNIKMEFDDEIGLS-----------------VYQRYATYLDAFGPDES 176
           AAEAVEEF GI+ +IKME DD IG+S                  YQRYA YLD+F P+E 
Sbjct: 150 AAEAVEEFGGILTSIKMEIDDSIGMSGEGVKPLPNDITDALRTAYQRYAEYLDSFEPEEV 209

Query: 177 YLRKKVETELGSKMIFLKMRCAGLGSEWGKVTVLGTSGLAGSYVEQRA 224
           YL+KKVE ELG+KMI LKMRC+GLGSEWGKVTVLGTSGL+GSYVEQRA
Sbjct: 210 YLKKKVEMELGTKMIHLKMRCSGLGSEWGKVTVLGTSGLSGSYVEQRA 257

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	224
224136704	239	predicted protein [Populus trichocarpa]	0.991	0.928	0.630	5e-79
118489030	239	unknown [Populus trichocarpa x Populus d	0.991	0.928	0.626	2e-78
225458573	242	PREDICTED: uncharacterized protein At1g4	0.991	0.917	0.576	6e-74
255538368	238	conserved hypothetical protein [Ricinus	0.973	0.915	0.602	1e-71
297852338	260	hypothetical protein ARALYDRAFT_473889 [	0.883	0.761	0.565	3e-64
18401719	257	succinate dehydrogenase 5 [Arabidopsis t	0.879	0.766	0.565	5e-64
351726377	225	uncharacterized protein LOC100527337 [Gl	0.745	0.742	0.635	2e-62
449470049	241	PREDICTED: uncharacterized protein At1g4	0.982	0.912	0.530	6e-62
388502854	238	unknown [Medicago truncatula]	0.745	0.701	0.603	1e-58
357437897	234	hypothetical protein MTR_1g019810 [Medic	0.745	0.713	0.603	6e-58

>gi|224136704|ref|XP_002326924.1| predicted protein [Populus trichocarpa] gi|118481849|gb|ABK92861.1| unknown [Populus trichocarpa] gi|222835239|gb|EEE73674.1| predicted protein [Populus trichocarpa]

 Score =  299 bits (766), Expect = 5e-79,   Method: Compositional matrix adjust.
 Identities = 152/241 (63%), Positives = 176/241 (73%), Gaps = 19/241 (7%)

Query: 1   MEKIAVMSVRSIRRAACVRSSIIAAANNHHLRHLSSSRSLFSLSSPAASIPSKSIPFDCR 60
           MEK+  +  R+I RAAC+ SS  AA +   LRH  +SRSLF++S+P+ S   K IP D R
Sbjct: 1   MEKMGAL--RTIYRAACLGSSRSAAISQSQLRHHLASRSLFTVSAPSVSTTPKRIPCDFR 58

Query: 61  SSLVMSIGCNRSFSEDVAHMPVIRDPEIQRAFKDLMAADWGELPASVIHDAKSALSRNND 120
           S   MS+G +RSFSEDV H P I+DPEI   FKDLMA +W ELP +V+ DAK ALS+N D
Sbjct: 59  SPFAMSLGSSRSFSEDVTHFPDIKDPEILNVFKDLMATNWDELPNAVVSDAKKALSKNTD 118

Query: 121 DKAGQEVLKNVFSAAEAVEEFIGIIMNIKMEFDDEIGLS-----------------VYQR 163
           DK GQE+LKNVF AAEAVEEF G IM++KME DD IGLS                  YQR
Sbjct: 119 DKVGQEILKNVFRAAEAVEEFGGKIMSLKMELDDIIGLSGENVKPLPELHANAIRTFYQR 178

Query: 164 YATYLDAFGPDESYLRKKVETELGSKMIFLKMRCAGLGSEWGKVTVLGTSGLAGSYVEQR 223
           YA YLD+FGP E YLRKKVETELGS+MI+LKMRC GLG+EWGKVTVLGTSGLAGSYVEQR
Sbjct: 179 YAAYLDSFGPGEGYLRKKVETELGSRMIYLKMRCCGLGAEWGKVTVLGTSGLAGSYVEQR 238

Query: 224 A 224
           A
Sbjct: 239 A 239

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|118489030|gb|ABK96322.1| unknown [Populus trichocarpa x Populus deltoides]

 Score =  297 bits (760), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 151/241 (62%), Positives = 176/241 (73%), Gaps = 19/241 (7%)

Query: 1   MEKIAVMSVRSIRRAACVRSSIIAAANNHHLRHLSSSRSLFSLSSPAASIPSKSIPFDCR 60
           MEK+  +  R+I RAAC+ SS  AA +   LRH  +SRSLF++S+P+ S   K IP D R
Sbjct: 1   MEKMGAL--RTIYRAACLGSSRSAAISQSQLRHHLASRSLFTVSAPSVSTTPKRIPCDFR 58

Query: 61  SSLVMSIGCNRSFSEDVAHMPVIRDPEIQRAFKDLMAADWGELPASVIHDAKSALSRNND 120
           S   MS+G +R FSEDV H P I+DPEI   FKDLMA +W ELP +V+ DAK ALS+N D
Sbjct: 59  SPFAMSLGSSRFFSEDVTHFPDIKDPEILNVFKDLMATNWDELPNAVVSDAKKALSKNTD 118

Query: 121 DKAGQEVLKNVFSAAEAVEEFIGIIMNIKMEFDDEIGLS-----------------VYQR 163
           DKAGQ++LKNVF AAEAVEEF G IM++KME DD IGLS                  YQR
Sbjct: 119 DKAGQDILKNVFRAAEAVEEFGGKIMSLKMELDDIIGLSGENVKPLPELHDNAIRTFYQR 178

Query: 164 YATYLDAFGPDESYLRKKVETELGSKMIFLKMRCAGLGSEWGKVTVLGTSGLAGSYVEQR 223
           YA YLD+FGP E YLRKKVETELGS+MI+LKMRC GLG+EWGKVTVLGTSGLAGSYVEQR
Sbjct: 179 YAAYLDSFGPGEGYLRKKVETELGSRMIYLKMRCCGLGAEWGKVTVLGTSGLAGSYVEQR 238

Query: 224 A 224
           A
Sbjct: 239 A 239

Source: Populus trichocarpa x Populus deltoides

Species: Populus trichocarpa x Populus deltoides

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225458573|ref|XP_002284591.1| PREDICTED: uncharacterized protein At1g47420, mitochondrial [Vitis vinifera] gi|147811478|emb|CAN63226.1| hypothetical protein VITISV_002665 [Vitis vinifera] gi|302142337|emb|CBI19540.3| unnamed protein product [Vitis vinifera]

 Score =  282 bits (722), Expect = 6e-74,   Method: Compositional matrix adjust.
 Identities = 140/243 (57%), Positives = 176/243 (72%), Gaps = 21/243 (8%)

Query: 1   MEKIAVMSVRSIRRAACVRSSIIAAANNHH--LRHLSSSRSLFSLSSPAASIPSKSIPFD 58
           ME++ ++  RS+ R+A  RS   +A  NHH  LRH +SSRSLF+L +P A    +++P D
Sbjct: 1   MERMVLL--RSLFRSAAFRSCRFSAVVNHHQQLRHYASSRSLFNLFAPTAIASRQALPSD 58

Query: 59  CRSSLVMSIGCNRSFSEDVAHMPVIRDPEIQRAFKDLMAADWGELPASVIHDAKSALSRN 118
           CR+   +SIG  RSFSEDV+H+PVI+DPEIQ  FKDLMAA W ELP SVI  A   LS+N
Sbjct: 59  CRTPFAVSIGSTRSFSEDVSHLPVIKDPEIQTVFKDLMAASWDELPDSVISSANKVLSKN 118

Query: 119 NDDKAGQEVLKNVFSAAEAVEEFIGIIMNIKMEFDDEIGLS-----------------VY 161
            DDKAGQE L NVF AAEA  EF GI++ ++ME DD +G+S                 V+
Sbjct: 119 TDDKAGQEALANVFRAAEAAVEFGGILVTLRMEIDDLVGISGENVKPLPDEFVNALVTVF 178

Query: 162 QRYATYLDAFGPDESYLRKKVETELGSKMIFLKMRCAGLGSEWGKVTVLGTSGLAGSYVE 221
           +RY TYLD+FGPDE++LRKKVE ELG+KMI LK+RC+ LG+EWGKVT+LGTSGL+GSYVE
Sbjct: 179 KRYTTYLDSFGPDEAFLRKKVEMELGTKMIHLKLRCSDLGAEWGKVTLLGTSGLSGSYVE 238

Query: 222 QRA 224
           QRA
Sbjct: 239 QRA 241

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255538368|ref|XP_002510249.1| conserved hypothetical protein [Ricinus communis] gi|223550950|gb|EEF52436.1| conserved hypothetical protein [Ricinus communis]

 Score =  275 bits (702), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 147/244 (60%), Positives = 177/244 (72%), Gaps = 26/244 (10%)

Query: 1   MEKIAVMSVRSIRRAACVRSSIIAAA-NNHHL--RHLSSSRSLFSLSSPAASIPSKSIPF 57
           MEK  V+ +RSI RAAC RSS IA A   HHL   HLSSSRS+FSL+S +  + S    F
Sbjct: 1   MEKKMVL-LRSICRAACFRSSRIADAFTQHHLLPHHLSSSRSIFSLASSSNRVSSD---F 56

Query: 58  DCRSSLVMSIGCNRSFSEDVAHMPVIRDPEIQRAFKDLMAADWGELPASVIHDAKSALSR 117
             R S  M +G  R FSEDV  +P I+DP++++AFK+LMAA W ELP  +++D K ALS+
Sbjct: 57  GYRFS--MGVGNRRCFSEDVTRLPAIQDPQVKKAFKNLMAASWDELPDPLLYDVKIALSK 114

Query: 118 NNDDKAGQEVLKNVFSAAEAVEEFIGIIMNIKMEFDDEIGLS-----------------V 160
           N DDK+GQ++LKNVF AAEAVEEF GI+M++KME DD IGLS                  
Sbjct: 115 NTDDKSGQDILKNVFRAAEAVEEFGGILMSLKMELDDNIGLSGENVKPLSDEYANALRTA 174

Query: 161 YQRYATYLDAFGPDESYLRKKVETELGSKMIFLKMRCAGLGSEWGKVTVLGTSGLAGSYV 220
           +QRY+ YLDAFGPDE +LRKKVE ELGSKMI+LKMRC+GL S WGKVTVLGTSGLAGSY+
Sbjct: 175 FQRYSAYLDAFGPDEGFLRKKVEMELGSKMIYLKMRCSGLDSAWGKVTVLGTSGLAGSYI 234

Query: 221 EQRA 224
           EQRA
Sbjct: 235 EQRA 238

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297852338|ref|XP_002894050.1| hypothetical protein ARALYDRAFT_473889 [Arabidopsis lyrata subsp. lyrata] gi|297339892|gb|EFH70309.1| hypothetical protein ARALYDRAFT_473889 [Arabidopsis lyrata subsp. lyrata]

 Score =  250 bits (638), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 130/230 (56%), Positives = 161/230 (70%), Gaps = 32/230 (13%)

Query: 27  NNHHLR-HLSSSRSLFS------LSSPAASIP---SKSIPFDC-----RSSLVMSIGCNR 71
            +HH+  HLS  RSL +      L +P+AS+      +I + C     + S  + +G  R
Sbjct: 31  GSHHIEEHLSRHRSLMTVVDKSPLVTPSASVTIGKGSAISYGCARRDLQYSRAIGVGQVR 90

Query: 72  SFSEDVAHMPVIRDPEIQRAFKDLMAADWGELPASVIHDAKSALSRNNDDKAGQEVLKNV 131
            FSEDV+HMP ++D ++  AFKDLMAADW ELP++V+ +AKSA+S+N DDKAGQE LKNV
Sbjct: 91  RFSEDVSHMPEMKDSDVLNAFKDLMAADWAELPSAVVRNAKSAISKNTDDKAGQEALKNV 150

Query: 132 FSAAEAVEEFIGIIMNIKMEFDDEIGLS-----------------VYQRYATYLDAFGPD 174
           F AAEAVEEF GI+ +IKME DD IG+S                  YQRYA YLD+F P+
Sbjct: 151 FRAAEAVEEFGGILTSIKMEIDDSIGMSGEGVKPLPNDITDALRTAYQRYADYLDSFEPE 210

Query: 175 ESYLRKKVETELGSKMIFLKMRCAGLGSEWGKVTVLGTSGLAGSYVEQRA 224
           E YL+KKVE ELG+KMI LKMRC+GLGSEWGKVTVLGTSGL+GSYVEQRA
Sbjct: 211 EVYLKKKVEMELGTKMIHLKMRCSGLGSEWGKVTVLGTSGLSGSYVEQRA 260

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18401719|ref|NP_564506.1| succinate dehydrogenase 5 [Arabidopsis thaliana] gi|25091506|sp|Q9SX77.1|UMP6_ARATH RecName: Full=Uncharacterized protein At1g47420, mitochondrial; Flags: Precursor gi|5668814|gb|AAD46040.1|AC007519_25 ESTs gb|H36253 and gb|AA04251 come from this gene [Arabidopsis thaliana] gi|12744995|gb|AAK06877.1|AF344326_1 unknown protein [Arabidopsis thaliana] gi|14334512|gb|AAK59453.1| unknown protein [Arabidopsis thaliana] gi|15450966|gb|AAK96754.1| Unknown protein [Arabidopsis thaliana] gi|17104551|gb|AAL34164.1| unknown protein [Arabidopsis thaliana] gi|21536627|gb|AAM60959.1| unknown [Arabidopsis thaliana] gi|23198274|gb|AAN15664.1| Unknown protein [Arabidopsis thaliana] gi|332194047|gb|AEE32168.1| succinate dehydrogenase 5 [Arabidopsis thaliana]

 Score =  249 bits (637), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 129/228 (56%), Positives = 158/228 (69%), Gaps = 31/228 (13%)

Query: 27  NNHHL-RHLSSSRSLFSLSSPAAS------------IPSKSIPFDCRSSLVMSIGCNRSF 73
            +HH+ +HLS  R+L +++ P AS            I   S+  D +    M +G  R F
Sbjct: 31  GSHHIEKHLSRHRTLITVA-PNASVIGDVQINKGSFISYASVSRDLQYPRAMGMGQVRRF 89

Query: 74  SEDVAHMPVIRDPEIQRAFKDLMAADWGELPASVIHDAKSALSRNNDDKAGQEVLKNVFS 133
           SEDV+HMP + D ++  AFKDLMAADW ELP++V+ DAK+A+S+N DDKAGQE LKNVF 
Sbjct: 90  SEDVSHMPEMEDSDVLNAFKDLMAADWAELPSAVVKDAKTAISKNTDDKAGQEALKNVFR 149

Query: 134 AAEAVEEFIGIIMNIKMEFDDEIGLS-----------------VYQRYATYLDAFGPDES 176
           AAEAVEEF GI+ +IKME DD IG+S                  YQRYA YLD+F P+E 
Sbjct: 150 AAEAVEEFGGILTSIKMEIDDSIGMSGEGVKPLPNDITDALRTAYQRYAEYLDSFEPEEV 209

Query: 177 YLRKKVETELGSKMIFLKMRCAGLGSEWGKVTVLGTSGLAGSYVEQRA 224
           YL+KKVE ELG+KMI LKMRC+GLGSEWGKVTVLGTSGL+GSYVEQRA
Sbjct: 210 YLKKKVEMELGTKMIHLKMRCSGLGSEWGKVTVLGTSGLSGSYVEQRA 257

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351726377|ref|NP_001238404.1| uncharacterized protein LOC100527337 [Glycine max] gi|255632117|gb|ACU16411.1| unknown [Glycine max]

 Score =  244 bits (623), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 117/184 (63%), Positives = 143/184 (77%), Gaps = 17/184 (9%)

Query: 58  DCRSSLVMSIGCNRSFSEDVAHMPVIRDPEIQRAFKDLMAADWGELPASVIHDAKSALSR 117
           +CRS L M +G  R +SEDV HMP I+DP +  AFKDLMA  W ELP SVI D K+ALS+
Sbjct: 42  ECRSPLSMGLGSMRFYSEDVTHMPNIKDPVLYNAFKDLMAVSWSELPDSVISDVKNALSK 101

Query: 118 NNDDKAGQEVLKNVFSAAEAVEEFIGIIMNIKMEFDDEIGLS-----------------V 160
           N DDKAG+EV++NVF AA+A+EEF GI++++K+EFDD IG+S                 +
Sbjct: 102 NTDDKAGKEVVENVFCAAKAIEEFGGILISLKLEFDDSIGMSGEDVKPLPDHIKNALHTI 161

Query: 161 YQRYATYLDAFGPDESYLRKKVETELGSKMIFLKMRCAGLGSEWGKVTVLGTSGLAGSYV 220
           + RY+TYL++FGPDESYLRKKVETELG+KMI LKMRC+GLG+EWGKVTVLGTSGLA SYV
Sbjct: 162 FDRYSTYLNSFGPDESYLRKKVETELGAKMIHLKMRCSGLGAEWGKVTVLGTSGLARSYV 221

Query: 221 EQRA 224
           EQRA
Sbjct: 222 EQRA 225

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449470049|ref|XP_004152731.1| PREDICTED: uncharacterized protein At1g47420, mitochondrial-like [Cucumis sativus] gi|449496011|ref|XP_004160011.1| PREDICTED: uncharacterized protein At1g47420, mitochondrial-like [Cucumis sativus]

 Score =  243 bits (619), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 130/245 (53%), Positives = 167/245 (68%), Gaps = 25/245 (10%)

Query: 1   MEKIAVMSVRSIRRAACVRSSIIAAANNHHLRHLSS--SRSLFSLSS--PAASIPSKSIP 56
           MEK  ++  RS+ R+   RS  IA   + +L   +   +RS F LSS  P+ S   + + 
Sbjct: 1   MEKTVIL--RSLLRSVRARSYGIAGVTHRNLLQSNHQVARSFFYLSSHRPSFSDSPQRVS 58

Query: 57  FDCRSSLVMSIGCNRSFSEDVAHMPVIRDPEIQRAFKDLMAADWGELPASVIHDAKSALS 116
            DC  S    +G  R FS DV  MP I DP++Q  FKDLMAA W +LP +VI+D K+ALS
Sbjct: 59  SDC--SYPSGVGHARYFSADVVSMPTIEDPKLQNVFKDLMAASWDKLPEAVIYDVKTALS 116

Query: 117 RNNDDKAGQEVLKNVFSAAEAVEEFIGIIMNIKMEFDDEIGLS----------------- 159
            + DDKAG+E+++NVF AAEA EEF  +++N+KME DD IGLS                 
Sbjct: 117 GSTDDKAGKEIVENVFRAAEAAEEFGDMLINLKMEIDDSIGLSGENVKPLSDELKKALHT 176

Query: 160 VYQRYATYLDAFGPDESYLRKKVETELGSKMIFLKMRCAGLGSEWGKVTVLGTSGLAGSY 219
           V++RY  YLD+FGP+E+YLRKKVETELG+KMI+LKMRC+GLGSEWGKV+VLGTSGL+GSY
Sbjct: 177 VHERYIAYLDSFGPEENYLRKKVETELGTKMIYLKMRCSGLGSEWGKVSVLGTSGLSGSY 236

Query: 220 VEQRA 224
           VEQRA
Sbjct: 237 VEQRA 241

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388502854|gb|AFK39493.1| unknown [Medicago truncatula]

 Score =  231 bits (590), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 111/184 (60%), Positives = 137/184 (74%), Gaps = 17/184 (9%)

Query: 58  DCRSSLVMSIGCNRSFSEDVAHMPVIRDPEIQRAFKDLMAADWGELPASVIHDAKSALSR 117
           +CRS     IG  R +SE+V HMP I+DPE+   FKDL+A +W +L  +V+ DAK ALS+
Sbjct: 55  ECRSPFSNGIGSMRFYSEEVTHMPDIKDPELYSVFKDLLAENWSDLSDAVVSDAKHALSK 114

Query: 118 NNDDKAGQEVLKNVFSAAEAVEEFIGIIMNIKMEFDDEIGLS-----------------V 160
           + +D+AG+EV+ NVF AA+AVEEF GI+  +KME DD IGLS                 +
Sbjct: 115 STEDEAGKEVVTNVFRAAQAVEEFGGILNTLKMEIDDSIGLSGEDVKPLPDHMQNALRTI 174

Query: 161 YQRYATYLDAFGPDESYLRKKVETELGSKMIFLKMRCAGLGSEWGKVTVLGTSGLAGSYV 220
           + RY TYL+AFGPDE+YLRKKVE ELG+KMI+LKMRC+GLGSEWGKVTVLGTSGLAGSYV
Sbjct: 175 FDRYTTYLNAFGPDENYLRKKVEQELGTKMIYLKMRCSGLGSEWGKVTVLGTSGLAGSYV 234

Query: 221 EQRA 224
           EQRA
Sbjct: 235 EQRA 238

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357437897|ref|XP_003589224.1| hypothetical protein MTR_1g019810 [Medicago truncatula] gi|355478272|gb|AES59475.1| hypothetical protein MTR_1g019810 [Medicago truncatula]

 Score =  229 bits (584), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 111/184 (60%), Positives = 136/184 (73%), Gaps = 17/184 (9%)

Query: 58  DCRSSLVMSIGCNRSFSEDVAHMPVIRDPEIQRAFKDLMAADWGELPASVIHDAKSALSR 117
           +CRS     IG  R +SE+V HMP I+DPE+   FKDL+A +W +L  +V+ DAK ALS+
Sbjct: 51  ECRSPFSNGIGSMRFYSEEVTHMPDIKDPELYSVFKDLLAENWSDLSDAVVSDAKHALSK 110

Query: 118 NNDDKAGQEVLKNVFSAAEAVEEFIGIIMNIKMEFDDEIGLS-----------------V 160
           + +D+AG+EV+ NVF AA+AVEEF GI+  +KME DD IGLS                 +
Sbjct: 111 STEDEAGKEVVTNVFRAAQAVEEFGGILNTLKMEIDDSIGLSGEDVKPLPDHMQNALRTI 170

Query: 161 YQRYATYLDAFGPDESYLRKKVETELGSKMIFLKMRCAGLGSEWGKVTVLGTSGLAGSYV 220
           + RY TYL+AFGPDE+YLRKKVE ELG+KMI LKMRC+GLGSEWGKVTVLGTSGLAGSYV
Sbjct: 171 FDRYTTYLNAFGPDENYLRKKVEQELGTKMIHLKMRCSGLGSEWGKVTVLGTSGLAGSYV 230

Query: 221 EQRA 224
           EQRA
Sbjct: 231 EQRA 234

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	224
TAIR|locus:2015428	257	SDH5 "AT1G47420" [Arabidopsis	0.455	0.396	0.627	9.9e-58

TAIR|locus:2015428 SDH5 "AT1G47420" [Arabidopsis thaliana (taxid:3702)]

 Score = 330 (121.2 bits), Expect = 9.9e-58, Sum P(2) = 9.9e-58
 Identities = 64/102 (62%), Positives = 79/102 (77%)

Query:    58 DCRSSLVMSIGCNRSFSEDVAHMPVIRDPEIQRAFKDLMAADWGELPASVIHDAKSALSR 117
             D +    M +G  R FSEDV+HMP + D ++  AFKDLMAADW ELP++V+ DAK+A+S+
Sbjct:    74 DLQYPRAMGMGQVRRFSEDVSHMPEMEDSDVLNAFKDLMAADWAELPSAVVKDAKTAISK 133

Query:   118 NNDDKAGQEVLKNVFSAAEAVEEFIGIIMNIKMEFDDEIGLS 159
             N DDKAGQE LKNVF AAEAVEEF GI+ +IKME DD IG+S
Sbjct:   134 NTDDKAGQEALKNVFRAAEAVEEFGGILTSIKMEIDDSIGMS 175

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0005739 "mitochondrion" evidence=IDA

GO:0005634 "nucleus" evidence=IDA

GO:0005749 "mitochondrial respiratory chain complex II" evidence=IDA

GO:0006511 "ubiquitin-dependent protein catabolic process" evidence=RCA

GO:0009853 "photorespiration" evidence=RCA

GO:0051788 "response to misfolded protein" evidence=RCA

GO:0080129 "proteasome core complex assembly" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9SX77	UMP6_ARATH	No assigned EC number	0.5657	0.8794	0.7665	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	224
pfam14290	238	pfam14290, DUF4370, Domain of unknown function (DU	1e-117
PLN02749	173	PLN02749, PLN02749, Uncharacterized protein At1g47	7e-92

>gnl|CDD|222654 pfam14290, DUF4370, Domain of unknown function (DUF4370)

 Score =  332 bits (853), Expect = e-117
 Identities = 153/243 (62%), Positives = 178/243 (73%), Gaps = 24/243 (9%)

Query: 1   MEKIAVMSVRSIRRAACVRSSIIAAANNHH--LRHLSSSRSLFSLSSPAASIPSKSIPFD 58
           MEK+  + +RS+ R+A  RSS  +AA+  H  LRH  SSRSLF L+SPA+      +  D
Sbjct: 1   MEKM--VLLRSLFRSAPFRSSRSSAASQGHHQLRHHLSSRSLFPLASPASP---SRLSSD 55

Query: 59  CRSSLVMSIGCNRSFSEDVAHMPVIRDPEIQRAFKDLMAADWGELPASVIHDAKSALSRN 118
           CR    MS G  R FSEDV H+P I+DPEI+ AFKDLMAA W ELP SV+ DAK ALS+N
Sbjct: 56  CRYPFAMSWGSRRFFSEDVTHLPAIKDPEIENAFKDLMAASWDELPDSVVSDAKKALSKN 115

Query: 119 NDDKAGQEVLKNVFSAAEAVEEFIGIIMNIKMEFDDEIGLS-----------------VY 161
            DDKAGQE LKNVF AAEAVEEF GI++++KME DD IGLS                  Y
Sbjct: 116 TDDKAGQEALKNVFRAAEAVEEFGGILVSLKMELDDLIGLSGENVKPLPDYIENALRTAY 175

Query: 162 QRYATYLDAFGPDESYLRKKVETELGSKMIFLKMRCAGLGSEWGKVTVLGTSGLAGSYVE 221
           QRY+TYLD+FGP+E YLRKKVETELG+KMI LKMRC+GLGSEWGKVTVLGTSGL+GSYVE
Sbjct: 176 QRYSTYLDSFGPEEGYLRKKVETELGTKMIHLKMRCSGLGSEWGKVTVLGTSGLSGSYVE 235

Query: 222 QRA 224
           QRA
Sbjct: 236 QRA 238

Length = 238

>gnl|CDD|178350 PLN02749, PLN02749, Uncharacterized protein At1g47420

 Score =  266 bits (682), Expect = 7e-92
 Identities = 116/171 (67%), Positives = 135/171 (78%), Gaps = 17/171 (9%)

Query: 71  RSFSEDVAHMPVIRDPEIQRAFKDLMAADWGELPASVIHDAKSALSRNNDDKAGQEVLKN 130
           R FSEDV+H+P I DPEI +AFKDLMAA W ELP SV++DAK ALS+N DDKAGQE LKN
Sbjct: 3   RRFSEDVSHLPEISDPEILKAFKDLMAASWDELPDSVVNDAKKALSKNTDDKAGQEALKN 62

Query: 131 VFSAAEAVEEFIGIIMNIKMEFDDEIGLS-----------------VYQRYATYLDAFGP 173
           VF AAEAVEEF G +++++ME DD IGLS                  YQRYA YLD+FGP
Sbjct: 63  VFRAAEAVEEFGGTLVSLRMEIDDLIGLSGENVKPLPDYIENALETAYQRYAAYLDSFGP 122

Query: 174 DESYLRKKVETELGSKMIFLKMRCAGLGSEWGKVTVLGTSGLAGSYVEQRA 224
           +E+YL+KKVE ELG+KMI LKMRC+GLGSEWGKVT+LGTSGL+GSYVEQRA
Sbjct: 123 EENYLKKKVEMELGTKMIHLKMRCSGLGSEWGKVTLLGTSGLSGSYVEQRA 173

Length = 173

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	224
PF14290	239	DUF4370: Domain of unknown function (DUF4370)	100.0
PLN02749	173	Uncharacterized protein At1g47420	100.0

>PF14290 DUF4370: Domain of unknown function (DUF4370)

Probab=100.00  E-value=4.7e-115  Score=751.40  Aligned_cols=220  Identities=67%  Similarity=1.046  Sum_probs=209.6

Q ss_pred             CchhhhHHHHHHHHHHhhhhhhHHhh--hhhhhhhhcccccccccCCCCCCCCCCCCCCCCCCcccccccccccccccCC
Q 027365            1 MEKIAVMSVRSIRRAACVRSSIIAAA--NNHHLRHLSSSRSLFSLSSPAASIPSKSIPFDCRSSLVMSIGCNRSFSEDVA   78 (224)
Q Consensus         1 mek~~m~~lrs~~r~a~~~s~~~~~~--~~~~~~h~s~~~sl~t~~~~~~~~ps~~~~~d~~~~~s~~~~~~R~fS~d~~   78 (224)
                      ||| ||+.||++||++|++|++.++.  .+++++|..+.+++++++++.+  +. ++++||++||+||||++|+||+|++
T Consensus         1 m~~-~~~~lr~~~R~~~~~s~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~--~~-~~~s~~~~~~a~s~~~~R~fS~d~~   76 (239)
T PF14290_consen    1 MEK-AMSALRSLLRSAALRSSRSSSASRSHHQIRHHLSSRSLFTLSSPSS--RN-RISSDCGGPFAMSWGSRRFFSEDVS   76 (239)
T ss_pred             Cch-HHHHHHHHHHHHHHHHhhhhhhhcchhhhhhhhhhccccCCCCccc--cc-cccccccCCcccccchhhhcccccc
Confidence            787 5999999999999999987555  3477788558999999988873  33 8899999999999999999999999


Q ss_pred             CCCCCCCHHHHHHHHHHHHcccCCCchhHHHHHHhhhcccCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhccch
Q 027365           79 HMPVIRDPEIQRAFKDLMAADWGELPASVIHDAKSALSRNNDDKAGQEVLKNVFSAAEAVEEFIGIIMNIKMEFDDEIGL  158 (224)
Q Consensus        79 hlP~i~Dp~i~~afKdLmA~sW~elp~svv~~ak~alSk~tdDkaGqeaL~nvfrAAeAvEeFgGiL~~LrmeiDDl~Gl  158 (224)
                      |||+|+||||++|||||||+||+|||++||++||+||||||||+||||||+||||||||||||||+|++|||||||||||
T Consensus        77 hlP~i~Dp~i~~afKdLmAasW~elp~svv~~akkalSk~tdD~AGqeaL~nvfRAAeAvEeFgG~L~tLrm~idDl~Gl  156 (239)
T PF14290_consen   77 HLPAISDPEIEKAFKDLMAASWDELPDSVVNEAKKALSKNTDDKAGQEALKNVFRAAEAVEEFGGILVTLRMEIDDLCGL  156 (239)
T ss_pred             cCCCCCCHHHHHHHHHHHhcchhhCCHHHHHHHHHHHhccCccchhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHhcCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             h-----------------HHHHHHHHHhhcCCChhHHHHHHHHhhhhhhhhhhhhhcCCCCCccceEEeeccCCCccchh
Q 027365          159 S-----------------VYQRYATYLDAFGPDESYLRKKVETELGSKMIFLKMRCAGLGSEWGKVTVLGTSGLAGSYVE  221 (224)
Q Consensus       159 s-----------------ay~rY~~YLdsFgpdE~yLrKKVE~ELGtkmI~LKmRcsGlgseWGKVtlLGTSGLsGSYvE  221 (224)
                      |                 +|+||++|||||||||+|||||||+|||+|||||||||||||||||||||||||||||||||
T Consensus       157 sGEnv~PLP~~~~~Al~t~y~rY~~YL~sFgp~E~yLrKKVE~ELGtkmi~lKmRcsGlg~eWgkvtllGTSGlsGSYvE  236 (239)
T PF14290_consen  157 SGENVKPLPDYIENALRTAYKRYMTYLDSFGPDEHYLRKKVEMELGTKMIHLKMRCSGLGSEWGKVTLLGTSGLSGSYVE  236 (239)
T ss_pred             CCCCCCCCcHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHhhhhHHHHhhhhcCCCcccceeeEeecCcCccchhh
Confidence            9                 99999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hcC
Q 027365          222 QRA  224 (224)
Q Consensus       222 qRa  224 (224)
                      |||
T Consensus       237 qRA  239 (239)
T PF14290_consen  237 QRA  239 (239)
T ss_pred             hcC
Confidence            997

>PLN02749 Uncharacterized protein At1g47420

Probab=100.00  E-value=8e-101  Score=639.90  Aligned_cols=156  Identities=74%  Similarity=1.181  Sum_probs=154.8

Q ss_pred             ccccccccCCCCCCCCCHHHHHHHHHHHHcccCCCchhHHHHHHhhhcccCCchhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 027365           69 CNRSFSEDVAHMPVIRDPEIQRAFKDLMAADWGELPASVIHDAKSALSRNNDDKAGQEVLKNVFSAAEAVEEFIGIIMNI  148 (224)
Q Consensus        69 ~~R~fS~d~~hlP~i~Dp~i~~afKdLmA~sW~elp~svv~~ak~alSk~tdDkaGqeaL~nvfrAAeAvEeFgGiL~~L  148 (224)
                      ++|+||+|++|||+|+||+|++|||||||+||+|||++|+++||+|||||||||||||||+||||||||||||||+|++|
T Consensus         1 ~~R~fs~d~~~lP~i~Dp~i~~afkdLma~sW~elp~sv~~~~kkalsk~tddkagqeaL~nvfrAAeAveeFgG~L~sL   80 (173)
T PLN02749          1 LRRRFSEDVSHLPEISDPEILKAFKDLMAASWDELPDSVVNDAKKALSKNTDDKAGQEALKNVFRAAEAVEEFGGTLVSL   80 (173)
T ss_pred             CccccccccccCCCCCCHHHHHHHHHHHhcchhhCChHHHHHHHHHHhcCCcchhhHHHHHHHHHHHHHHHHHhhHHHHH
Confidence            58999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhhhccchh-----------------HHHHHHHHHhhcCCChhHHHHHHHHhhhhhhhhhhhhhcCCCCCccceEEee
Q 027365          149 KMEFDDEIGLS-----------------VYQRYATYLDAFGPDESYLRKKVETELGSKMIFLKMRCAGLGSEWGKVTVLG  211 (224)
Q Consensus       149 rmeiDDl~Gls-----------------ay~rY~~YLdsFgpdE~yLrKKVE~ELGtkmI~LKmRcsGlgseWGKVtlLG  211 (224)
                      |||||||||+|                 +||||++|||||||||+|||||||+|||+|||||||||||||||||||||||
T Consensus        81 rmeidDl~GlsGEnv~PLPd~~~~Al~tay~rY~~YLdsFgp~E~yLrKKVE~ELG~kmi~lKmRcsGl~~eWgkvtllG  160 (173)
T PLN02749         81 RMEIDDLIGLSGENVKPLPDYIENALETAYQRYAAYLDSFGPEENYLKKKVEMELGTKMIHLKMRCSGLGSEWGKVTLLG  160 (173)
T ss_pred             HHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHhHHHHHHHhhhcCCCcccceeeEee
Confidence            99999999999                 9999999999999999999999999999999999999999999999999999


Q ss_pred             ccCCCccchhhcC
Q 027365          212 TSGLAGSYVEQRA  224 (224)
Q Consensus       212 TSGLsGSYvEqRa  224 (224)
                      ||||||||||||+
T Consensus       161 TSGlsGSYvEqRa  173 (173)
T PLN02749        161 TSGLSGSYVEQRA  173 (173)
T ss_pred             cCcccchhhhhcC
Confidence            9999999999997

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	224
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	6e-04

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 39.5 bits (91), Expect = 6e-04
 Identities = 18/104 (17%), Positives = 37/104 (35%), Gaps = 20/104 (19%)

Query: 87  EIQRAFKDLMAADWGELPASVIHDAKSALSRNNDDKAGQEVLKNVFSAAEAVEEFIGI-- 144
           E Q  +KD+            +   + A   N D K  Q++ K++ S  E ++  I    
Sbjct: 13  EHQYQYKDI------------LSVFEDAFVDNFDCKDVQDMPKSILSKEE-IDHIIMSKD 59

Query: 145 -IMNIKMEFD--DEIGLSVYQRYATYLDAFGPDESYLRKKVETE 185
            +      F         + Q++    +    +  +L   ++TE
Sbjct: 60  AVSGTLRLFWTLLSKQEEMVQKFVE--EVLRINYKFLMSPIKTE 101

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00