Citrus Sinensis ID: 027586

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-
Protein Sequence
MDTECWGDEVSKKVLWQYKSLPKKGKPQGREVTVLAAFLISSPSKDLEVVALGTGTKCIGRSLLSPHGDIVNDSHAEIVARRALLRFFYTEVLNKQKCSNGIEGLRDDVFNNFLFELGPTGKYRFREGWQLHLYISQLPCGDASLSSCHSAPRNFFSREGNSLSSVDELNGFKDGIYDSLQHIGRVQRKPGRGDTTLSVSCSDKIARWNAVGVQGLFNYNL
Secondary Structure (PSIPRED)
ccccHHHHHHHHHHHHHHHcccccccccccccEEEEEEEEEEccccEEEEEEccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccEEEEcccccEEEcccEEEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccEEccccccccccEEccccHHHHHHHHHHHcHHcccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHHHHHHHHHHHccccccccccEEEEEEEEEcccccEEEEEEEcccEEcccccccccccEEccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccEEEEcccccEEEcccEEEEEEEEcccccccccccccccccccccccccccccccccccEEEcccccccccccEcccccccccEEEEcccHHHHHHHHHHHHHHHHHcc
Coil and Loop (DISEMBL)
mdtecwgdevSKKVLWQYKslpkkgkpqgrEVTVLAAFLISSPSKDLEVVALGTGtkcigrsllsphgdivndSHAEIVARRALLRFFYTEVLNKqkcsngieglrdDVFNNflfelgptgkyrfregWQLHLYISqlpcgdaslsschsaprnffsregnslssvdelngfkdgIYDSLQHIgrvqrkpgrgdttlsvsCSDKIARWNAVGVQGLFNYNL
Flexible Loop (DISEMBL)
mdtecwgdevskkVLWQYkslpkkgkpqgrEVTVLAAFLISSPSKDLEVVALGTGTKCIGRSLLSPHGDIVNDSHAEIVARRALLRFFYTEVLNKQKCSNGIEGLRDDVFNNFLFELGPTGKYRFREGWQLHLYISQLPCGDASLSSCHSAPRNFFSREGNSLSSVDELNGFKDGIYDSLQHigrvqrkpgrgdttLSVSCSDKiarwnavgvqglfnynl
Low Complexity Region (SEG)
MDTECWGDEVSKKVLWQYKSLPKKGKPQGREVTVLAAFLISSPSKDLEVVALGTGTKCIGRSLLSPHGDIVNDSHAEIVARRALLRFFYTEVLNKQKCSNGIEGLRDDVFNNFLFELGPTGKYRFREGWQLHLYISQLPCGDASLSSCHSAPRNFFSREGNSLSSVDELNGFKDGIYDSLQHIGRVQRKPGRGDTTLSVSCSDKIARWNAVGVQGLFNYNL
Disordered region (IsUnstruct)
****CWGDEVSKKVLWQYKSL********REVTVLAAFLISSPSKDLEVVALGTGTKCIGRSLLSPHGDIVNDSHAEIVARRALLRFFYTEVLNKQKCSNGIEGLRDDVFNNFLFELGPTGKYRFREGWQLHLYISQLPCGDASLSSC********************LNGFKDGIYDSLQHIGRVQ******DTTLSVSCSDKIARWNAVGVQGLFNY**
Disordered Region (DISOPRED)
****CWGDEVSKKVLWQYKSLPKKGKPQGREVTVLAAFLISSPSKDLEVVALGTGTKCIGRSLLSPHGDIVNDSHAEIVARRALLRFFYTEVLN*************************TGKYRFREGWQLHLYISQLPCGDASLSSCHSAPRNF*********************YDSLQHIGRVQRKPGRGDTTLSVSCSDKIARWNAVGVQGLFNYN*
Disordered Region (DISEMBL)
********EVSKKVLWQYKSLPKKGKPQGREVTVLAAFLISSPSKDLEVVALGTGTKCIGRSLLSPHGDIVNDSHAEIVARRALLRFFYTEVLNKQKCSNGIEGLRDDVFNNFLFELGPTGKYRFREGWQLHLYISQLPCGDASLSSCHSAPRNFFSREGNSLSSVDELNGFKDGIYDSLQHIGRVQRKPGRGDTTLSVSCSDKIARWNAVGVQGLFNYNL
Disordered Region (DISPRO)
*DTECWGDEVSKKVLWQYKSLPKKGKPQGREVTVLAAFLISSPSKDLEVVALGTGTKCIGRSLLSPHGDIVNDSHAEIVARRALLRFFYTEVLNKQKCS***********NNFLFELGPTGKYRFREGWQLHLYISQLPCGDASLSS***********************GFKDGIYDSLQHIGRVQRKPGRGDTTLSVSCSDKIARWNAVGVQGLFNYNL
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MDTECWGDEVSKKVLWQYKSLPKKGKPQGREVTVLAAFLISSPSKDLEVVALGTGTKCIGRSLLSPHGDIVNDSHAEIVARRALLRFFYTEVLNKQKCSNGIEGLRDDVFNNFLFELGPTGKYRFREGWQLHLYISQLPCGDASLSSCHSAPRNFFSREGNSLSSVDELNGFKDGIYDSLQHIGRVQRKPGRGDTTLSVSCSDKIARWNAVGVQGLFNYNL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	221	2.2.26 [Sep-21-2011]
Q9V3R6	394	tRNA-specific adenosine d	yes	no	0.855	0.479	0.403	7e-30
Q9NS39	739	Double-stranded RNA-speci	no	no	0.882	0.263	0.334	1e-21
Q91ZS8	711	Double-stranded RNA-speci	yes	no	0.918	0.285	0.314	1e-21
P51400	711	Double-stranded RNA-speci	yes	no	0.918	0.285	0.314	1e-21
P78563	741	Double-stranded RNA-speci	no	no	0.904	0.269	0.312	5e-20
Q54XP3	545	tRNA-specific adenosine d	yes	no	0.597	0.242	0.351	1e-19
P97616	746	Double-stranded RNA-speci	no	no	0.895	0.265	0.325	2e-18
Q9JI20	745	Double-stranded RNA-speci	no	no	0.882	0.261	0.316	2e-18
Q9NII1	676	Double-stranded RNA-speci	no	no	0.859	0.281	0.286	6e-18
P55265	1226	Double-stranded RNA-speci	no	no	0.714	0.128	0.314	9e-18

>sp|Q9V3R6|ADAT1_DROME tRNA-specific adenosine deaminase 1 OS=Drosophila melanogaster GN=adat PE=2 SV=1

 Score =  130 bits (327), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 86/213 (40%), Positives = 116/213 (54%), Gaps = 24/213 (11%)

Query: 9   EVSKKVLWQYKSLPKKGKPQGREVTVLAAFL-ISSPSKDLEVVALGTGTKCIGRSLLSPH 67
           E+++  L +++SLPK GKP   + T+LA  +  +  ++  ++V+LG GTKCIG S L P+
Sbjct: 11  EIAELCLKKFESLPKTGKPTANQWTILAGIVEFNRNTEACQLVSLGCGTKCIGESKLCPN 70

Query: 68  GDIVNDSHAEIVARRALLRFFYTEVLNKQKCSNGIEGLRDDVF--NNFLFELGPTGKYRF 125
           G I+NDSHAE++ARR  LRF Y E+  KQ          D +F  N+ L        Y  
Sbjct: 71  GLILNDSHAEVLARRGFLRFLYQEL--KQ----------DRIFHWNSTL------STYDM 112

Query: 126 REGWQLHLYISQLPCGDAS-LSSCHSAPRNFFSREGNSLSSVDELNGFKDGIYDS--LQH 182
            E  + H   +Q PCGDA  L     A R    R       V         + D   LQ 
Sbjct: 113 DEHVEFHFLSTQTPCGDACILEEEQPAARAKRQRLDEDSEMVYTGAKLISDLSDDPMLQT 172

Query: 183 IGRVQRKPGRGDTTLSVSCSDKIARWNAVGVQG 215
            G ++ KPGRG+ TLS+SCSDKIARWN +GVQG
Sbjct: 173 PGALRTKPGRGERTLSMSCSDKIARWNVIGVQG 205

Specifically deaminates adenosine-37 to inosine in tRNA-Ala.
Drosophila melanogaster (taxid: 7227)
EC: 3EC: .EC: 5EC: .EC: 4EC: .EC: -

>sp|Q9NS39|RED2_HUMAN Double-stranded RNA-specific editase B2 OS=Homo sapiens GN=ADARB2 PE=1 SV=1

 Score =  103 bits (256), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 75/224 (33%), Positives = 110/224 (49%), Gaps = 29/224 (12%)

Query: 6   WGDEVSKKVLWQYKSLPKKGKPQGREVTVLAAFLISS--PSKDLEVVALGTGTKCIGRSL 63
           + D +S+ V  +++ +     P       LA  +++    ++  +VVAL +GTKCI    
Sbjct: 361 FADSISQLVTQKFREVTTDLTPMHARHKALAGIVMTKGLDARQAQVVALSSGTKCISGEH 420

Query: 64  LSPHGDIVNDSHAEIVARRALLRFFYTEV---LNKQKCSNGIEGLRDDVFNNFLFELGPT 120
           LS  G +VND HAE+VARRA L F YT++   L+K+         R+D   +    L   
Sbjct: 421 LSDQGLVVNDCHAEVVARRAFLHFLYTQLELHLSKR---------REDSERSIFVRLK-E 470

Query: 121 GKYRFREGWQLHLYISQLPCGDASLSSCHSAPRNFFSREGNSLSSVDELNGFKDGIYDSL 180
           G YR RE    HLY+S  PCGDA L S +    +  S    S   V +  G      +S 
Sbjct: 471 GGYRLRENILFHLYVSTSPCGDARLHSPYEITTDLHS----SKHLVRKFRGHLRTKIESG 526

Query: 181 QHIGRVQRKPGR---------GDTTLSVSCSDKIARWNAVGVQG 215
           +    V R P           G+  +++SC+DKIARWN +G+QG
Sbjct: 527 EGTVPV-RGPSAVQTWDGVLLGEQLITMSCTDKIARWNVLGLQG 569

Does not act on glutamate receptor or on serotonin receptor subtype 2C. Capable of binding to dsRNA but also to ssRNA.

Homo sapiens (taxid: 9606)

EC: 3

EC: .

EC: 5

EC: .

EC: -

EC: .

EC: -

>sp|Q91ZS8|RED1_MOUSE Double-stranded RNA-specific editase 1 OS=Mus musculus GN=Adarb1 PE=1 SV=1

 Score =  102 bits (255), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 72/229 (31%), Positives = 113/229 (49%), Gaps = 26/229 (11%)

Query: 4   ECWGDEVSKKVLWQYKSLPKK-GKPQGREVTVLAAFLISSPS--KDLEVVALGTGTKCIG 60
           +   D VS+ VL ++  L      P  R   VL+  ++++ +  KD +V+++ TGTKCI 
Sbjct: 321 QVLADAVSRLVLGKFSDLTDNFSSPHARR-KVLSGVVMTTGTDVKDAKVISVSTGTKCIN 379

Query: 61  RSLLSPHGDIVNDSHAEIVARRALLRFFYTEVLNKQKCSNGIEGLRDDVFNNFLFELGPT 120
              +S  G  +ND HAEI++RR+LLRF Y ++   +   N  E  +  +F          
Sbjct: 380 GEYMSDRGLALNDCHAEIISRRSLLRFLYAQL---ELYLNNKEDQKKSIFQK-----SER 431

Query: 121 GKYRFREGWQLHLYISQLPCGDASLSSCHSAPRNFFSREGNSLSSVDELNGFKDGIYDSL 180
           G +R ++  Q HLYIS  PCGDA + S H       + + + L+   + +  +       
Sbjct: 432 GGFRLKDTVQFHLYISTSPCGDARIFSPHEPVLEGMTPDSHQLTEPADRHPNRKARGQLR 491

Query: 181 QHI------------GRVQRKPG--RGDTTLSVSCSDKIARWNAVGVQG 215
             I              +Q   G  +G+  L++SCSDKIARWN VG+QG
Sbjct: 492 TKIESGEGTIPVRSNASIQTWDGVLQGERLLTMSCSDKIARWNVVGIQG 540

Editing of the messenger RNAs for glutamate receptor (GluR) subunits by site-selective adenosine deamination. Edits both the GluR-B Q/R and R/G sites efficiently but converts the adenosine in hotspot1 much less efficiently.

Mus musculus (taxid: 10090)

EC: 3

EC: .

EC: 5

EC: .

EC: -

EC: .

EC: -

>sp|P51400|RED1_RAT Double-stranded RNA-specific editase 1 OS=Rattus norvegicus GN=Adarb1 PE=1 SV=1

 Score =  102 bits (255), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 72/229 (31%), Positives = 113/229 (49%), Gaps = 26/229 (11%)

Query: 4   ECWGDEVSKKVLWQYKSLPKK-GKPQGREVTVLAAFLISSPS--KDLEVVALGTGTKCIG 60
           +   D VS+ VL ++  L      P  R   VL+  ++++ +  KD +V+++ TGTKCI 
Sbjct: 321 QVLADAVSRLVLGKFSDLTDNFSSPHARR-KVLSGVVMTTGTDVKDAKVISVSTGTKCIN 379

Query: 61  RSLLSPHGDIVNDSHAEIVARRALLRFFYTEVLNKQKCSNGIEGLRDDVFNNFLFELGPT 120
              +S  G  +ND HAEI++RR+LLRF Y ++   +   N  E  +  +F          
Sbjct: 380 GEYMSDRGLALNDCHAEIISRRSLLRFLYAQL---ELYLNNKEDQKKSIFQK-----SER 431

Query: 121 GKYRFREGWQLHLYISQLPCGDASLSSCHSAPRNFFSREGNSLSSVDELNGFKDGIYDSL 180
           G +R ++  Q HLYIS  PCGDA + S H       + + + L+   + +  +       
Sbjct: 432 GGFRLKDTVQFHLYISTSPCGDARIFSPHEPVLEGMAPDSHQLTEPADRHPNRKARGQLR 491

Query: 181 QHI------------GRVQRKPG--RGDTTLSVSCSDKIARWNAVGVQG 215
             I              +Q   G  +G+  L++SCSDKIARWN VG+QG
Sbjct: 492 TKIESGEGTIPVRSNASIQTWDGVLQGERLLTMSCSDKIARWNVVGIQG 540

Editing of the messenger RNAs for glutamate receptor (GluR) subunits by site-selective adenosine deamination. Edits both the GluR-B Q/R and R/G sites efficiently but converts the adenosine in hotspot1 much less efficiently.

Rattus norvegicus (taxid: 10116)

EC: 3

EC: .

EC: 5

EC: .

EC: -

EC: .

EC: -

>sp|P78563|RED1_HUMAN Double-stranded RNA-specific editase 1 OS=Homo sapiens GN=ADARB1 PE=1 SV=1

 Score = 97.8 bits (242), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 82/262 (31%), Positives = 119/262 (45%), Gaps = 62/262 (23%)

Query: 4   ECWGDEVSKKVLWQYKSLPKK-GKPQGREVTVLAAFLISSPS--KDLEVVALGTGTKCIG 60
           +   D VS+ VL ++  L      P  R   VLA  ++++ +  KD +V+++ TGTKCI 
Sbjct: 321 QVLADAVSRLVLGKFGDLTDNFSSPHARR-KVLAGVVMTTGTDVKDAKVISVSTGTKCIN 379

Query: 61  RSLLSPHGDIVNDSHAEIVARRALLRFFYTEV---LNKQKCSNGIEGLRDDVFNNFLFEL 117
              +S  G  +ND HAEI++RR+LLRF YT++   LN           +DD   + +F+ 
Sbjct: 380 GEYMSDRGLALNDCHAEIISRRSLLRFLYTQLELYLNN----------KDDQKRS-IFQK 428

Query: 118 GPTGKYRFREGWQLHLYISQLPCGDASLSSCHSA---PRNFFSREGNSLSSVDELNGFKD 174
              G +R +E  Q HLYIS  PCGDA + S H         +++ G    +   L     
Sbjct: 429 SERGGFRLKENVQFHLYISTSPCGDARIFSPHEPILEGSRSYTQAGVQWCNHGSLQPRPP 488

Query: 175 GIY-----DSLQHIGRVQ---RKPGR------------GDTTLSV--------------- 199
           G+       + Q  G  +   R P R            G+ T+ V               
Sbjct: 489 GLLSDPSTSTFQGAGTTEPADRHPNRKARGQLRTKIESGEGTIPVRSNASIQTWDGVLQG 548

Query: 200 ------SCSDKIARWNAVGVQG 215
                 SCSDKIARWN VG+QG
Sbjct: 549 ERLLTMSCSDKIARWNVVGIQG 570

Editing of the messenger RNAs for glutamate receptor (GluR) subunits by site-selective adenosine deamination. Edits both the GluR-B Q/R and R/G sites efficiently but converts the adenosine in hotspot1 much less efficiently.

Homo sapiens (taxid: 9606)

EC: 3

EC: .

EC: 5

EC: .

EC: -

EC: .

EC: -

>sp|Q54XP3|ADAT1_DICDI tRNA-specific adenosine deaminase 1 OS=Dictyostelium discoideum GN=adat1 PE=3 SV=1

 Score = 96.7 bits (239), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 57/162 (35%), Positives = 85/162 (52%), Gaps = 30/162 (18%)

Query: 19  KSLPKKGKPQGREVTVLAAFLI----SSPSKDLEVVALGTGTKCIGRSLLSPHGDIVNDS 74
           K L KKGKP   E TVLA  ++    +S  +  +V++LGTG +C+G+S LS  GD++NDS
Sbjct: 23  KKLIKKGKPISGEWTVLATLVLVVENTSSYEIKQVLSLGTGNRCLGKSSLSNQGDVLNDS 82

Query: 75  HAEIVARRALLRFFYTEVLNKQKCSNGIEGLRDDVFNNFLFEL---------------GP 119
           HAEI+ +R+  +F Y E+LN          L+   +N+ LF +               G 
Sbjct: 83  HAEIICKRSFQKFCYNEILN---------LLQSKYYNSILFNIEYHDSNNNNKDNDNNGS 133

Query: 120 TGKYRFREGWQLHLYISQLPCGDASLSSC--HSAPRNFFSRE 159
                 ++G  LH Y++Q PCGD S+      + P NF  +E
Sbjct: 134 LPTISIKKGHSLHFYVNQTPCGDCSIFPFKKETQPENFIEKE 175

Specifically deaminates adenosine-37 to inosine in tRNA-Ala.

Dictyostelium discoideum (taxid: 44689)

EC: 3

EC: .

EC: 5

EC: .

EC: 4

EC: .

EC: -

>sp|P97616|RED2_RAT Double-stranded RNA-specific editase B2 OS=Rattus norvegicus GN=Adarb2 PE=2 SV=1

 Score = 92.8 bits (229), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 72/221 (32%), Positives = 103/221 (46%), Gaps = 23/221 (10%)

Query: 6   WGDEVSKKVLWQYKSLPKKGKPQGREVTVLAAFLISS--PSKDLEVVALGTGTKCIGRSL 63
           + D VS+ V  +++ L             LA  +++    +K  +V+ L +GTKCI    
Sbjct: 368 FADSVSQLVTQKFRELTVGLTSVYARHKTLAGIVMTKGLDTKQAQVIVLSSGTKCISGEH 427

Query: 64  LSPHGDIVNDSHAEIVARRALLRFFYTEVLNKQKCSNGIEGLRDDVFNNFLFELGPTGKY 123
           +S  G +VND HAEIVARRA L F YT++  +   S   E     +F          G Y
Sbjct: 428 ISDQGLVVNDCHAEIVARRAFLHFLYTQL--ELHLSKHQEDPERSIFIRV-----KEGGY 480

Query: 124 RFREGWQLHLYISQLPCGDASLSSCHSAPRNFFSREGNSLSSVDELNGFKDGIYDSLQHI 183
           R RE    HLY+S  PCGDA L+S    P        +S   V +  G      +S +  
Sbjct: 481 RLRENILFHLYVSTSPCGDARLNS----PYEITIDLNSSKHIVRKFRGHLRTKIESGEGT 536

Query: 184 GRVQRKPGR---------GDTTLSVSCSDKIARWNAVGVQG 215
             V R P           G+  +++SC+DKIA WN +G+QG
Sbjct: 537 VPV-RGPSAVQTWDGILLGEQLVTMSCTDKIASWNVLGLQG 576

Does not act on glutamate receptor or on serotonin receptor subtype 2C. Capable of binding to dsRNA but also to ssRNA.

Rattus norvegicus (taxid: 10116)

EC: 3

EC: .

EC: 5

EC: .

EC: -

EC: .

EC: -

>sp|Q9JI20|RED2_MOUSE Double-stranded RNA-specific editase B2 OS=Mus musculus GN=Adarb2 PE=2 SV=2

 Score = 92.8 bits (229), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 71/224 (31%), Positives = 107/224 (47%), Gaps = 29/224 (12%)

Query: 6   WGDEVSKKVLWQYKSLPKKGKPQGREVTVLAAFLISS--PSKDLEVVALGTGTKCIGRSL 63
           + D VS+ V  +++ L             LA  +++    +K  +V+ L +GTKCI    
Sbjct: 367 FADSVSQLVTQKFRELTVGLTSVYARHKTLAGIVMTKGLDTKQAQVIVLSSGTKCISGEH 426

Query: 64  LSPHGDIVNDSHAEIVARRALLRFFYTEV---LNKQKCSNGIEGLRDDVFNNFLFELGPT 120
           +S  G +VND HAEIVARRA L F Y+++   L+K +         +D   +    L   
Sbjct: 427 ISDQGLVVNDCHAEIVARRAFLHFLYSQLELHLSKHQ---------EDPERSIFIRLK-E 476

Query: 121 GKYRFREGWQLHLYISQLPCGDASLSSCHSAPRNFFSREGNSLSSVDELNGFKDGIYDSL 180
           G YR RE    HLY+S  PCGDA ++S    P    +   +S   V +  G      +S 
Sbjct: 477 GGYRLRENILFHLYVSTSPCGDARVNS----PYEITTDLNSSKHIVRKFRGHLRTKIESG 532

Query: 181 QHIGRVQRKPGR---------GDTTLSVSCSDKIARWNAVGVQG 215
           +    V R P           G+  +++SC+DKIA WN +G+QG
Sbjct: 533 EGTVPV-RGPSAVQTWDGILLGEQLITMSCTDKIASWNVLGLQG 575

Does not act on glutamate receptor or on serotonin receptor subtype 2C. Capable of binding to dsRNA but also to ssRNA.

Mus musculus (taxid: 10090)

EC: 3

EC: .

EC: 5

EC: .

EC: -

EC: .

EC: -

>sp|Q9NII1|ADAR_DROME Double-stranded RNA-specific editase Adar OS=Drosophila melanogaster GN=Adar PE=1 SV=2

 Score = 90.9 bits (224), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 66/230 (28%), Positives = 108/230 (46%), Gaps = 40/230 (17%)

Query: 4   ECWGDEVSKKVLWQYKSLPKKGKPQGREVTVLAAFLISSPSK--DLEVVALGTGTKCIGR 61
           +   D + + VL ++  + K  +   R   VLA  +++      + +V+++ TGTKC+  
Sbjct: 300 QIHADTIGRLVLEKFMEVIKGQEAYSRR-KVLAGIVMTENMNFCEAKVISVSTGTKCVSG 358

Query: 62  SLLSPHGDIVNDSHAEIVARRALLRFFYTEVLNKQKCSNGIEGLRDDVFNNFLFELGPTG 121
             +S +G ++NDSHAEIV+RR LL++ Y ++  +   +   + +       F+       
Sbjct: 359 EHMSVNGAVLNDSHAEIVSRRCLLKYLYAQLDLQCNQATAYQSI-------FVRNTDGQY 411

Query: 122 KYRFREGWQLHLYISQLPCGDASLSSCHSAPR------NFFSR--------EGNSLSSVD 167
            Y+ + G   HLYI+  PCGDA + S H          N  +R         G     V 
Sbjct: 412 PYKLKSGVHFHLYINTAPCGDARIFSPHENDTGVDKHPNRKARGQLRTKIESGEGTIPVK 471

Query: 168 ELNGFK--DGIYDSLQHIGRVQRKPGRGDTTLSVSCSDKIARWNAVGVQG 215
             +G +  DG+               +G   L++SCSDKIARWN VG+QG
Sbjct: 472 SSDGIQTWDGVL--------------QGQRLLTMSCSDKIARWNIVGIQG 507

Has A-to-I RNA editing activity on extended dsRNA: edits RNA-binding protein Rnp4F. A-to-I editing of pre-mRNAs acts predominantly through nervous system targets to affect adult nervous system integrity, function and behavior. Essential for adaptation to environmental stresses, such as oxygen deprivation, and for the prevention of premature neuronal degeneration, through the editing of ion channels as targets.

Drosophila melanogaster (taxid: 7227)

EC: 3

EC: .

EC: 5

EC: .

EC: -

EC: .

EC: -

>sp|P55265|DSRAD_HUMAN Double-stranded RNA-specific adenosine deaminase OS=Homo sapiens GN=ADAR PE=1 SV=4

 Score = 90.5 bits (223), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 65/207 (31%), Positives = 98/207 (47%), Gaps = 49/207 (23%)

Query: 34   VLAAFLISSPSKDL-EVVALGTGTKCIGRSLLSPHGDIVNDSHAEIVARRALLRFFYTEV 92
            +LAA ++   S+D+  VV+LGTG +C+    LS  G+ VND HAEI++RR  +RF Y+E+
Sbjct: 868  ILAAIIMKKDSEDMGVVVSLGTGNRCVKGDSLSLKGETVNDCHAEIISRRGFIRFLYSEL 927

Query: 93   L--NKQKCSNGIEGLRDDVFNNFLFELGPTG-KYRFREGWQLHLYISQLPCGDASLSSCH 149
            +  N Q   + I            FE    G K + ++    HLYIS  PCGD +L    
Sbjct: 928  MKYNSQTAKDSI------------FEPAKGGEKLQIKKTVSFHLYISTAPCGDGALFDKS 975

Query: 150  SAPRNFFSREGNSLSSVDELNGFKDGIYDSLQHIGRVQRKPGRGDTTLSV---------- 199
             + R   S E                ++++ +  G+++ K   G+ T+ V          
Sbjct: 976  CSDRAMESTESRHYP-----------VFENPKQ-GKLRTKVENGEGTIPVESSDIVPTWD 1023

Query: 200  -----------SCSDKIARWNAVGVQG 215
                       SCSDKI RWN +G+QG
Sbjct: 1024 GIRLGERLRTMSCSDKILRWNVLGLQG 1050

Converts multiple adenosines to inosines and creates I/U mismatched base pairs in double-helical RNA substrates without apparent sequence specificity. Has been found to modify more frequently adenosines in AU-rich regions, probably due to the relative ease of melting A/U base pairs as compared to G/C pairs. Functions to modify viral RNA genomes and may be responsible for hypermutation of certain negative-stranded viruses. Edits the messenger RNAs for glutamate receptor (GLUR) subunits by site-selective adenosine deamination. Produces low-level editing at the GLUR-B Q/R site, but edits efficiently at the R/G site and HOTSPOT1. Binds to short interfering RNAs (siRNA) without editing them and suppresses siRNA-mediated RNA interference. Binds to ILF3/NF90 and up-regulates ILF3-mediated gene expression.

Homo sapiens (taxid: 9606)

EC: 3

EC: .

EC: 5

EC: .

EC: 4

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	221
225454148	453	PREDICTED: tRNA-specific adenosine deami	0.995	0.485	0.588	3e-67
255541540	443	protein with unknown function [Ricinus c	1.0	0.498	0.582	4e-62
449441482	406	PREDICTED: tRNA-specific adenosine deami	0.936	0.509	0.598	6e-62
224127616	380	predicted protein [Populus trichocarpa]	0.841	0.489	0.630	5e-60
357497385	413	Double-stranded RNA-specific adenosine d	0.932	0.498	0.561	4e-59
356506269	407	PREDICTED: tRNA-specific adenosine deami	0.927	0.503	0.579	3e-57
297842944	399	predicted protein [Arabidopsis lyrata su	0.959	0.531	0.538	9e-56
91805727	356	adenosine-deaminase family/editase famil	0.981	0.609	0.535	9e-55
186478036	420	Adenosine-deaminase (editase) domain-con	0.981	0.516	0.535	2e-54
8671846	435	Contains similarity to RNA adenosine dea	0.981	0.498	0.535	3e-54

>gi|225454148|ref|XP_002273023.1| PREDICTED: tRNA-specific adenosine deaminase 1 [Vitis vinifera] gi|297745247|emb|CBI40327.3| unnamed protein product [Vitis vinifera]

 Score =  260 bits (665), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 153/260 (58%), Positives = 171/260 (65%), Gaps = 40/260 (15%)

Query: 1   MDTE-CWGDEVSKKVLWQYKSLPKKGKPQGREVTVLAAFLISSPSKDLEVVALGTGTKCI 59
           +D+E  WG++VS+KVL  YKSLPKKGKPQGREVTVLAAFL SSPS+DLEVVALGTGTKCI
Sbjct: 15  LDSEKTWGEQVSEKVLSVYKSLPKKGKPQGREVTVLAAFLTSSPSQDLEVVALGTGTKCI 74

Query: 60  GRSLLSPHGDIVNDSHAEIVARRALLRFFYTEVLNKQKCSN------GIEGLRDDVFNNF 113
           GRS LSPHGDIVNDSHAE++ARRAL+RFFYTE+ +    SN      G E L  D   N 
Sbjct: 75  GRSRLSPHGDIVNDSHAEVIARRALMRFFYTEIQSLLTISNRHTHNYGSEQLEGDDITNM 134

Query: 114 LFELGPTG----KYRFREGWQLHLYISQLPCGDASLSSCHSAPRNFFSREGNSLSSVDEL 169
           LF L   G    K   R GW+LHLYISQLPCGDASLS    + R+F    G+  SSV E 
Sbjct: 135 LFHLDSDGPGQRKITMRAGWKLHLYISQLPCGDASLSLPLFSLRSFALINGDLPSSVSE- 193

Query: 170 NGFKDGIYDSL---------------------------QHIGRVQRKPGRGDTTLSVSCS 202
           N   D   DSL                           Q IG +QRKPGRGDTTLSVSCS
Sbjct: 194 NDSMDEQTDSLSNLDDFTGDFLDASMKNNVGSFSGNGSQIIGMIQRKPGRGDTTLSVSCS 253

Query: 203 DKIARWNAVGVQG-LFNYNL 221
           DKIARWN +GVQG L +Y L
Sbjct: 254 DKIARWNVLGVQGALLSYFL 273

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255541540|ref|XP_002511834.1| protein with unknown function [Ricinus communis] gi|223549014|gb|EEF50503.1| protein with unknown function [Ricinus communis]

 Score =  243 bits (620), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 134/230 (58%), Positives = 165/230 (71%), Gaps = 9/230 (3%)

Query: 1   MDTECWGDEVSKKVLWQYKSLPKKGKPQGREVTVLAAFLISSPSKDLEVVALGTGTKCIG 60
           M++  WG++VS+KV+  Y SL KKGKPQGREVTVL++FLISSPS++LEV++LGTGTKC+G
Sbjct: 1   MESGSWGEKVSEKVISLYNSLQKKGKPQGREVTVLSSFLISSPSQELEVISLGTGTKCLG 60

Query: 61  RSLLSPHGDIVNDSHAEIVARRALLRFFYTEV--LNKQKCSNGIEGLRDDVFNNFLFEL- 117
           RS LSP GDIVNDSHAEI+ARRAL+RFFY+E+  L      +G E  + D   N LF+L 
Sbjct: 61  RSQLSPRGDIVNDSHAEIIARRALMRFFYSEIRRLTDTFNKHGREQFQSDDVGNCLFDLE 120

Query: 118 ---GPTGKYRFREGWQLHLYISQLPCGDASLSSCHSAPRNFFSR--EGNSLSSVDELNGF 172
                  K++ R GWQLHLYISQLPCGDAS+SS     RN F    +G   SS++ L   
Sbjct: 121 QDCSSQLKFKLRAGWQLHLYISQLPCGDASVSSPLLYMRNTFGTLPQGKLNSSMEVLEDS 180

Query: 173 KDGIYDSLQHIGRVQRKPGRGDTTLSVSCSDKIARWNAVGVQG-LFNYNL 221
           +    +  +  G VQRKPGRGD TLSVSCSDKIARWN +GVQG L +Y L
Sbjct: 181 EGNNAEGSEIGGSVQRKPGRGDATLSVSCSDKIARWNVLGVQGALLSYLL 230

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449441482|ref|XP_004138511.1| PREDICTED: tRNA-specific adenosine deaminase 1-like [Cucumis sativus] gi|449518611|ref|XP_004166330.1| PREDICTED: tRNA-specific adenosine deaminase 1-like [Cucumis sativus]

 Score =  242 bits (618), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 137/229 (59%), Positives = 163/229 (71%), Gaps = 22/229 (9%)

Query: 4   ECWGDEVSKKVLWQYKSLPKKGKPQGREVTVLAAFLISSPS-KDLEVVALGTGTKCIGRS 62
           E WG+ +S+KVL  Y +LPKKGKPQGREVTVLAAFL+SSPS +DLEVVALGTGTKC+GRS
Sbjct: 9   ERWGETISEKVLSVYNTLPKKGKPQGREVTVLAAFLLSSPSPQDLEVVALGTGTKCLGRS 68

Query: 63  LLSPHGDIVNDSHAEIVARRALLRFFYTEVLNKQKCSNGIE-----GLRDDVFNNFLF-- 115
            LS +GD+VNDSHAE+VARRAL+RFFYT++ ++ + ++  E      +R D  NNFL   
Sbjct: 69  QLSSNGDVVNDSHAEVVARRALMRFFYTQIYHQSQSNSESEHHKTKKMRCDNVNNFLLQI 128

Query: 116 --ELGPTGKYRFREGWQLHLYISQLPCGDASLSSCHSAPRNFFSREGNSLSSVDELNGFK 173
             E G   KY  R+ W+LHLYISQLPCGDAS     SA R+  +R  N    +     F 
Sbjct: 129 DEEAGAERKYVMRKCWKLHLYISQLPCGDAS----SSATRDVQARSDNVAPCL-----FD 179

Query: 174 DGIYDSLQHIGRVQRKPGRGDTTLSVSCSDKIARWNAVGVQG-LFNYNL 221
            G  D  Q IG VQRKPGRGDTTLSVSCSDKIARWN  G+QG L +Y L
Sbjct: 180 KG--DDSQCIGSVQRKPGRGDTTLSVSCSDKIARWNVAGLQGALLSYFL 226

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224127616|ref|XP_002320118.1| predicted protein [Populus trichocarpa] gi|222860891|gb|EEE98433.1| predicted protein [Populus trichocarpa]

 Score =  236 bits (602), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 135/214 (63%), Positives = 158/214 (73%), Gaps = 28/214 (13%)

Query: 18  YKSLPKKGKPQGREVTVLAAFLISSPSKDLEVVALGTGTKCIGRSLLSPHGDIVNDSHAE 77
           YKSLPKKGKPQG EVTVLA+FL+SSPS++LEVVALGTGTKC+GRSLLS  GDI+NDSHAE
Sbjct: 4   YKSLPKKGKPQGCEVTVLASFLLSSPSQELEVVALGTGTKCVGRSLLSNRGDILNDSHAE 63

Query: 78  IVARRALLRF--FYTEVLNKQKCSNGIEGLRDDVFNNFLFELGPTG----KYRFREGWQL 131
           I+ARRAL+RF   + E++ + K ++G         +N++FEL   G    K++ REGWQL
Sbjct: 64  IIARRALIRFITIFGELM-QVKINDG---------SNWIFELEQRGCSEEKFKLREGWQL 113

Query: 132 HLYISQLPCGDASLSSCHSAPRNFFSREGN---SLSSVDELNGFKDGIYDSLQHIGRVQR 188
           HLYISQLPCGDAS+SS  S  RN F+REG+   SLS     NG         Q  G VQR
Sbjct: 114 HLYISQLPCGDASVSSLLSPARNVFTREGDLPPSLSGRLSTNGS--------QISGMVQR 165

Query: 189 KPGRGDTTLSVSCSDKIARWNAVGVQG-LFNYNL 221
           KPGRGDTTLSVSCSDKIARWN VGVQG L +Y L
Sbjct: 166 KPGRGDTTLSVSCSDKIARWNVVGVQGALLSYFL 199

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357497385|ref|XP_003618981.1| Double-stranded RNA-specific adenosine deaminase [Medicago truncatula] gi|355493996|gb|AES75199.1| Double-stranded RNA-specific adenosine deaminase [Medicago truncatula]

 Score =  233 bits (594), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 132/235 (56%), Positives = 158/235 (67%), Gaps = 29/235 (12%)

Query: 5   CWGDEVSKKVLWQYKSLPKKGKPQGREVTVLAAFLISSPSKDLEVVALGTGTKCIGRSLL 64
           C    VS+KV+  Y SLPKKGKPQGREVTVLAAFL+SSPS +L+VVALGTGTKCIGRS+L
Sbjct: 10  CLDQSVSEKVISLYNSLPKKGKPQGREVTVLAAFLLSSPSNELKVVALGTGTKCIGRSML 69

Query: 65  SPHGDIVNDSHAEIVARRALLRFFYTEVL------NKQKCSNGIEGLRDDVFNNFLFELG 118
            P+GD+V+DSHAE++ARRAL+RFFYT++       +K   SNG +  + D  NN  FE+ 
Sbjct: 70  RPYGDVVHDSHAEVIARRALIRFFYTQIQRLSEPSSKSAPSNGAKRFKVDD-NNLAFEVD 128

Query: 119 P----TGKYRFREGWQLHLYISQLPC-------GDASLSSCHSAPRNFFSREGNSLSSVD 167
                  KY  R GW+LH+YISQLPC       GDASLSS  +   +    E        
Sbjct: 129 EGCLDKRKYTLRSGWKLHMYISQLPCNLIPHFRGDASLSSLVTPLESVPLGE-------- 180

Query: 168 ELNGFKDGIYDSLQHIGRVQRKPGRGDTTLSVSCSDKIARWNAVGVQG-LFNYNL 221
             NG      +S + IG VQRKPGRGDTTLSVSCSDKIARWN VG+QG L +Y L
Sbjct: 181 --NGPHSSSVNSSKQIGMVQRKPGRGDTTLSVSCSDKIARWNVVGIQGALLSYFL 233

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356506269|ref|XP_003521909.1| PREDICTED: tRNA-specific adenosine deaminase 1-like [Glycine max]

 Score =  227 bits (579), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 131/226 (57%), Positives = 156/226 (69%), Gaps = 21/226 (9%)

Query: 6   WGDEVSKKVLWQYKSLPKKGKPQGREVTVLAAFLISSPSKDLEVVALGTGTKCIGRSLLS 65
           WG  VS+KVL  Y SLPKKGKPQGREVTVLA+FL+SSPS DL+VVA+GTGTKC+GRSLL 
Sbjct: 13  WGKRVSEKVLSFYTSLPKKGKPQGREVTVLASFLLSSPSNDLKVVAMGTGTKCLGRSLLR 72

Query: 66  PHGDIVNDSHAEIVARRALLRFFYTEVLN----KQKCSNGIEGLRDDVFNNFLFELGP-- 119
             GD+V+DSHAE++ARRAL+RFFYT++ +    K   SNG +  + D  N+  FEL P  
Sbjct: 73  TCGDVVHDSHAEVIARRALIRFFYTQIQHLTGSKHAPSNGGKRFKLDDGNS-PFELDPGC 131

Query: 120 --TGKYRFREGWQLHLYISQLPCGDASLSSCHSAPRNFFSREGNSLSSVDELNGFKDGIY 177
              GKY  ++ W+LH+YISQLPCGDASLS   S        E +S S +   NG K    
Sbjct: 132 LNKGKYSLKKDWKLHMYISQLPCGDASLSWQVSPLETAVLGESDSTSPLG--NGLKQK-- 187

Query: 178 DSLQHIGRVQRKPGRGDTTLSVSCSDKIARWNAVGVQG--LFNYNL 221
                 G VQRKP RGDTTLSVSCSDKIARW+  GVQG  L +Y L
Sbjct: 188 ------GMVQRKPSRGDTTLSVSCSDKIARWSVAGVQGVALLSYFL 227

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297842944|ref|XP_002889353.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297335195|gb|EFH65612.1| predicted protein [Arabidopsis lyrata subsp. lyrata]

 Score =  222 bits (565), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 125/232 (53%), Positives = 152/232 (65%), Gaps = 20/232 (8%)

Query: 4   ECWGDEVSKKVLWQYKSLPKKGKPQGREVTVLAAFLISSPSKDLEVVALGTGTKCIGRSL 63
           E WG+ VS+KV+  Y SLPKKGKPQGREVTVL+AFL+SSPS+DL+V+ALGTGTKC+ RSL
Sbjct: 3   EDWGERVSEKVVSAYMSLPKKGKPQGREVTVLSAFLVSSPSQDLKVIALGTGTKCVSRSL 62

Query: 64  LSPHGDIVNDSHAEIVARRALLRFFYTEVLNKQKCSNG---IEGLRDDVFNNFLFELGPT 120
           LSP GDIVNDSHAE+VARRAL+RFFY+E+   Q  S+     +  R D   + + E   +
Sbjct: 63  LSPRGDIVNDSHAEVVARRALIRFFYSEIQGMQLTSDKSSEAKRQRLDCETSSVLESADS 122

Query: 121 G-----KYRFREGWQLHLYISQLPCGDASLSSCHSAPRNFFSRE------------GNSL 163
                 KY+ + G  LH+YISQLPCG AS SS   A +   S +            G+S 
Sbjct: 123 SCPGEVKYKLKSGCHLHMYISQLPCGYASTSSPFYALKKIPSTQVDDSFLVQASDIGSSR 182

Query: 164 SSVDELNGFKDGIYDSLQHIGRVQRKPGRGDTTLSVSCSDKIARWNAVGVQG 215
            S     G      +  Q    VQRKPGRG+TTLSVSCSDKIARWN +GVQG
Sbjct: 183 HSDVPQIGSNSHTGNGSQVADMVQRKPGRGETTLSVSCSDKIARWNVLGVQG 234

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|91805727|gb|ABE65592.1| adenosine-deaminase family/editase family protein [Arabidopsis thaliana]

 Score =  219 bits (557), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 128/239 (53%), Positives = 154/239 (64%), Gaps = 22/239 (9%)

Query: 4   ECWGDEVSKKVLWQYKSLPKKGKPQGREVTVLAAFLISSPSKDLEVVALGTGTKCIGRSL 63
           E WG  VS+KV+  Y SLPKKGKPQGREVTVL+AFL+SSPS+D +V+ALGTGTKC+  SL
Sbjct: 3   EDWGKTVSEKVISAYMSLPKKGKPQGREVTVLSAFLVSSPSQDPKVIALGTGTKCVSGSL 62

Query: 64  LSPHGDIVNDSHAEIVARRALLRFFYTEVLNKQKC---SNGIEGLRDDVFNNFLFELGPT 120
           LSP GDIVNDSHAE+VARRAL+RFFY+E+   Q     SN  +  R D   + + E   +
Sbjct: 63  LSPRGDIVNDSHAEVVARRALIRFFYSEIQRMQLTSGKSNEAKRQRIDSETSSILESADS 122

Query: 121 G-----KYRFREGWQLHLYISQLPCGDASLSSCHSAPRNFFSRE-GNSL----------- 163
                 KY+ + G  LHLYISQLPCG AS SS   A +   S +  +SL           
Sbjct: 123 SCPGEVKYKLKSGCLLHLYISQLPCGYASTSSPLYALKKIPSTQVDDSLLVQASDICSSR 182

Query: 164 -SSVDELNGFKDGIYDSLQHIGRVQRKPGRGDTTLSVSCSDKIARWNAVGVQGLFNYNL 221
            S V E+ G      +  Q    VQRKPGRG+TTLSVSCSDKIARWN +GVQG   Y +
Sbjct: 183 HSDVPEI-GSNSNKGNGSQVADMVQRKPGRGETTLSVSCSDKIARWNVLGVQGALLYQV 240

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|186478036|ref|NP_171681.3| Adenosine-deaminase (editase) domain-containing protein [Arabidopsis thaliana] gi|332189211|gb|AEE27332.1| Adenosine-deaminase (editase) domain-containing protein [Arabidopsis thaliana]

 Score =  217 bits (553), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 128/239 (53%), Positives = 154/239 (64%), Gaps = 22/239 (9%)

Query: 4   ECWGDEVSKKVLWQYKSLPKKGKPQGREVTVLAAFLISSPSKDLEVVALGTGTKCIGRSL 63
           E WG  VS+KV+  Y SLPKKGKPQGREVTVL+AFL+SSPS+D +V+ALGTGTKC+  SL
Sbjct: 3   EDWGKTVSEKVISAYMSLPKKGKPQGREVTVLSAFLVSSPSQDPKVIALGTGTKCVSGSL 62

Query: 64  LSPHGDIVNDSHAEIVARRALLRFFYTEVLNKQKC---SNGIEGLRDDVFNNFLFELGPT 120
           LSP GDIVNDSHAE+VARRAL+RFFY+E+   Q     SN  +  R D   + + E   +
Sbjct: 63  LSPRGDIVNDSHAEVVARRALIRFFYSEIQRMQLTSGKSNEAKRQRIDSETSSILESADS 122

Query: 121 G-----KYRFREGWQLHLYISQLPCGDASLSSCHSAPRNFFSRE-GNSL----------- 163
                 KY+ + G  LHLYISQLPCG AS SS   A +   S +  +SL           
Sbjct: 123 SCPGEVKYKLKSGCLLHLYISQLPCGYASTSSPLYALKKIPSTQVDDSLLVQASDICSSR 182

Query: 164 -SSVDELNGFKDGIYDSLQHIGRVQRKPGRGDTTLSVSCSDKIARWNAVGVQGLFNYNL 221
            S V E+ G      +  Q    VQRKPGRG+TTLSVSCSDKIARWN +GVQG   Y +
Sbjct: 183 HSDVPEI-GSNSNKGNGSQVADMVQRKPGRGETTLSVSCSDKIARWNVLGVQGALLYQV 240

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|8671846|gb|AAF78409.1|AC009273_15 Contains similarity to RNA adenosine deaminase gene, exon 15 from Homo sapiens gb|U75503. It contains the adenosine-deaminase (editase) domain PF|02137 [Arabidopsis thaliana]

 Score =  217 bits (552), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 128/239 (53%), Positives = 154/239 (64%), Gaps = 22/239 (9%)

Query: 4   ECWGDEVSKKVLWQYKSLPKKGKPQGREVTVLAAFLISSPSKDLEVVALGTGTKCIGRSL 63
           E WG  VS+KV+  Y SLPKKGKPQGREVTVL+AFL+SSPS+D +V+ALGTGTKC+  SL
Sbjct: 3   EDWGKTVSEKVISAYMSLPKKGKPQGREVTVLSAFLVSSPSQDPKVIALGTGTKCVSGSL 62

Query: 64  LSPHGDIVNDSHAEIVARRALLRFFYTEVLNKQKC---SNGIEGLRDDVFNNFLFELGPT 120
           LSP GDIVNDSHAE+VARRAL+RFFY+E+   Q     SN  +  R D   + + E   +
Sbjct: 63  LSPRGDIVNDSHAEVVARRALIRFFYSEIQRMQLTSGKSNEAKRQRIDSETSSILESADS 122

Query: 121 G-----KYRFREGWQLHLYISQLPCGDASLSSCHSAPRNFFSRE-GNSL----------- 163
                 KY+ + G  LHLYISQLPCG AS SS   A +   S +  +SL           
Sbjct: 123 SCPGEVKYKLKSGCLLHLYISQLPCGYASTSSPLYALKKIPSTQVDDSLLVQASDICSSR 182

Query: 164 -SSVDELNGFKDGIYDSLQHIGRVQRKPGRGDTTLSVSCSDKIARWNAVGVQGLFNYNL 221
            S V E+ G      +  Q    VQRKPGRG+TTLSVSCSDKIARWN +GVQG   Y +
Sbjct: 183 HSDVPEI-GSNSNKGNGSQVADMVQRKPGRGETTLSVSCSDKIARWNVLGVQGALLYQV 240

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	221
TAIR|locus:2198185	420	TAD1 "ortholog of yeast Tad1"	0.651	0.342	0.598	5.3e-40
ZFIN|ZDB-GENE-070410-64	466	adat1 "adenosine deaminase, tR	0.588	0.278	0.435	8e-32
DICTYBASE|DDB_G0278943	545	DDB_G0278943 "adenosine deamin	0.638	0.258	0.385	1.4e-30
FB|FBgn0028658	394	adat "adat" [Drosophila melano	0.850	0.477	0.387	9.1e-29
UNIPROTKB|D4A9N0	415	Adat1 "Protein Adat1" [Rattus	0.588	0.313	0.361	2.3e-26
RGD|1591020	498	Adat1 "adenosine deaminase, tR	0.588	0.261	0.361	5.8e-26
UNIPROTKB|A2VDL0	458	ADAT1 "Uncharacterized protein	0.588	0.283	0.358	2.3e-25
UNIPROTKB|Q5ZI16	503	ADAT1 "tRNA-specific adenosine	0.574	0.252	0.364	3.6e-25
UNIPROTKB|F1NE71	505	ADAT1 "tRNA-specific adenosine	0.574	0.251	0.364	3.6e-25
MGI|MGI:1353631	499	Adat1 "adenosine deaminase, tR	0.583	0.258	0.382	5.7e-25

TAIR|locus:2198185 TAD1 "ortholog of yeast Tad1" [Arabidopsis thaliana (taxid:3702)]

 Score = 426 (155.0 bits), Expect = 5.3e-40, P = 5.3e-40
 Identities = 91/152 (59%), Positives = 109/152 (71%)

Query:     4 ECWGDEVSKKVLWQYKSLPKKGKPQGREVTVLAAFLISSPSKDLEVVALGTGTKCIGRSL 63
             E WG  VS+KV+  Y SLPKKGKPQGREVTVL+AFL+SSPS+D +V+ALGTGTKC+  SL
Sbjct:     3 EDWGKTVSEKVISAYMSLPKKGKPQGREVTVLSAFLVSSPSQDPKVIALGTGTKCVSGSL 62

Query:    64 LSPHGDIVNDSHAEIVARRALLRFFYTEVLNKQKCS---NGIEGLRDDVFNNFLFELGPT 120
             LSP GDIVNDSHAE+VARRAL+RFFY+E+   Q  S   N  +  R D   + + E   +
Sbjct:    63 LSPRGDIVNDSHAEVVARRALIRFFYSEIQRMQLTSGKSNEAKRQRIDSETSSILESADS 122

Query:   121 G-----KYRFREGWQLHLYISQLPCGDASLSS 147
                   KY+ + G  LHLYISQLPCG AS SS
Sbjct:   123 SCPGEVKYKLKSGCLLHLYISQLPCGYASTSS 154

GO:0003723 "RNA binding" evidence=IEA;ISS

GO:0004000 "adenosine deaminase activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM

GO:0006396 "RNA processing" evidence=IEA;ISS

ZFIN|ZDB-GENE-070410-64 adat1 "adenosine deaminase, tRNA-specific 1" [Danio rerio (taxid:7955)]

 Score = 254 (94.5 bits), Expect = 8.0e-32, Sum P(2) = 8.0e-32
 Identities = 64/147 (43%), Positives = 87/147 (59%)

Query:     6 WG-DEVSKKVLWQYKSLPKKGKPQ-GREVTVLAAFL-ISS-PSKDL---EVVALGTGTKC 58
             W  DE++      +  LPK+GKP+ GRE T+LAA + I+  P +     +VV+LGTGTKC
Sbjct:     2 WSPDEIASLCYNHFNKLPKRGKPESGREWTLLAAVIQITDCPEQKTVQKQVVSLGTGTKC 61

Query:    59 IGRSLLSPHGDIVNDSHAEIVARRALLRFFYTEVLNKQKCSNGIEGLRDDVFNNFLFELG 118
             IGRS +S  GD++NDSHAE++ARR  +R+  TE L K      + G   DVF        
Sbjct:    62 IGRSAMSMKGDVLNDSHAEVIARRGSVRYL-TEQLLK-----AVRGQSSDVF----CAGS 111

Query:   119 PTGKYRFREGWQLHLYISQLPCGDASL 145
               GK+R + G     + SQ PCGDAS+
Sbjct:   112 EKGKWRLKAGVSFLFFTSQTPCGDASI 138

GO:0004000 "adenosine deaminase activity" evidence=IEA

GO:0006396 "RNA processing" evidence=IEA

GO:0003723 "RNA binding" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

DICTYBASE|DDB_G0278943 DDB_G0278943 "adenosine deaminase acting on tRNA 1" [Dictyostelium discoideum (taxid:44689)]

 Score = 238 (88.8 bits), Expect = 1.4e-30, Sum P(2) = 1.4e-30
 Identities = 59/153 (38%), Positives = 87/153 (56%)

Query:    19 KSLPKKGKPQGREVTVLAAFLI---SSPSKDL-EVVALGTGTKCIGRSLLSPHGDIVNDS 74
             K L KKGKP   E TVLA  ++   ++ S ++ +V++LGTG +C+G+S LS  GD++NDS
Sbjct:    23 KKLIKKGKPISGEWTVLATLVLVVENTSSYEIKQVLSLGTGNRCLGKSSLSNQGDVLNDS 82

Query:    75 HAEIVARRALLRFFYTEVLN--KQKCSNGIE---GLRDDVFNNFLFEL-GPTGKYRFREG 128
             HAEI+ +R+  +F Y E+LN  + K  N I       D   NN   +  G       ++G
Sbjct:    83 HAEIICKRSFQKFCYNEILNLLQSKYYNSILFNIEYHDSNNNNKDNDNNGSLPTISIKKG 142

Query:   129 WQLHLYISQLPCGDASLSSC--HSAPRNFFSRE 159
               LH Y++Q PCGD S+      + P NF  +E
Sbjct:   143 HSLHFYVNQTPCGDCSIFPFKKETQPENFIEKE 175

GO:0006396 "RNA processing" evidence=IEA

GO:0004000 "adenosine deaminase activity" evidence=IEA

GO:0003723 "RNA binding" evidence=IEA;ISS

GO:0005575 "cellular_component" evidence=ND

GO:0008251 "tRNA-specific adenosine deaminase activity" evidence=ISS

GO:0008033 "tRNA processing" evidence=IEA;ISS

GO:0006400 "tRNA modification" evidence=ISS

GO:0046872 "metal ion binding" evidence=IEA

GO:0016787 "hydrolase activity" evidence=IEA

FB|FBgn0028658 adat "adat" [Drosophila melanogaster (taxid:7227)]

 Score = 320 (117.7 bits), Expect = 9.1e-29, P = 9.1e-29
 Identities = 83/214 (38%), Positives = 118/214 (55%)

Query:     9 EVSKKVLWQYKSLPKKGKPQGREVTVLAAFL-ISSPSKDLEVVALGTGTKCIGRSLLSPH 67
             E+++  L +++SLPK GKP   + T+LA  +  +  ++  ++V+LG GTKCIG S L P+
Sbjct:    11 EIAELCLKKFESLPKTGKPTANQWTILAGIVEFNRNTEACQLVSLGCGTKCIGESKLCPN 70

Query:    68 GDIVNDSHAEIVARRALLRFFYTEVLNKQKCSNGIEGLRDDVFN-NFLFELGPTGKYRFR 126
             G I+NDSHAE++ARR  LRF Y E+  KQ          D +F+ N          Y   
Sbjct:    71 GLILNDSHAEVLARRGFLRFLYQEL--KQ----------DRIFHWN-----STLSTYDMD 113

Query:   127 EGWQLHLYISQLPCGDASL----SSCHSAPRNFFSREGNSLSSVDEL-NGFKDGIYDSLQ 181
             E  + H   +Q PCGDA +         A R     +   + +  +L +   D     LQ
Sbjct:   114 EHVEFHFLSTQTPCGDACILEEEQPAARAKRQRLDEDSEMVYTGAKLISDLSDD--PMLQ 171

Query:   182 HIGRVQRKPGRGDTTLSVSCSDKIARWNAVGVQG 215
               G ++ KPGRG+ TLS+SCSDKIARWN +GVQG
Sbjct:   172 TPGALRTKPGRGERTLSMSCSDKIARWNVIGVQG 205

GO:0008251 "tRNA-specific adenosine deaminase activity" evidence=ISS;IDA;NAS

GO:0006400 "tRNA modification" evidence=IDA

GO:0005575 "cellular_component" evidence=ND

GO:0003723 "RNA binding" evidence=IEA

UNIPROTKB|D4A9N0 Adat1 "Protein Adat1" [Rattus norvegicus (taxid:10116)]

 Score = 203 (76.5 bits), Expect = 2.3e-26, Sum P(2) = 2.3e-26
 Identities = 56/155 (36%), Positives = 84/155 (54%)

Query:     6 W-GDEVSKKVLWQYKSLPKKGKPQ-GREVTVLAAFL---------ISSPSKDL----EVV 50
             W  DE+++     Y  LPK+GKP+  RE T+LAA +           +P K +    EVV
Sbjct:     2 WTADEIAQLCYAHYIKLPKQGKPEPNREWTLLAAVVKIQTPANQACDTPDKQIQVTKEVV 61

Query:    51 ALGTGTKCIGRSLLSPHGDIVNDSHAEIVARRALLRFFYTEVLNKQKCSNGIEGLRDDVF 110
             ++GTGTKCIG+S +   GDI+NDSHAE++ARR+  R+    +L++   +  ++   D +F
Sbjct:    62 SMGTGTKCIGQSKMRESGDILNDSHAEVIARRSFQRY----ILHQLHVAAVLK--EDSIF 115

Query:   111 NNFLFELGPTGKYRFREGWQLHLYISQLPCGDASL 145
                       G +R R       + S  PCGDAS+
Sbjct:   116 ----LPGTQRGLWRLRPDLSFVFFSSHTPCGDASI 146

GO:0003723 "RNA binding" evidence=IEA

GO:0004000 "adenosine deaminase activity" evidence=IEA

GO:0006396 "RNA processing" evidence=IEA

RGD|1591020 Adat1 "adenosine deaminase, tRNA-specific 1" [Rattus norvegicus (taxid:10116)]

 Score = 203 (76.5 bits), Expect = 5.8e-26, Sum P(2) = 5.8e-26
 Identities = 56/155 (36%), Positives = 84/155 (54%)

Query:     6 W-GDEVSKKVLWQYKSLPKKGKPQ-GREVTVLAAFL---------ISSPSKDL----EVV 50
             W  DE+++     Y  LPK+GKP+  RE T+LAA +           +P K +    EVV
Sbjct:     2 WTADEIAQLCYAHYIKLPKQGKPEPNREWTLLAAVVKIQTPANQACDTPDKQIQVTKEVV 61

Query:    51 ALGTGTKCIGRSLLSPHGDIVNDSHAEIVARRALLRFFYTEVLNKQKCSNGIEGLRDDVF 110
             ++GTGTKCIG+S +   GDI+NDSHAE++ARR+  R+    +L++   +  ++   D +F
Sbjct:    62 SMGTGTKCIGQSKMRESGDILNDSHAEVIARRSFQRY----ILHQLHVAAVLK--EDSIF 115

Query:   111 NNFLFELGPTGKYRFREGWQLHLYISQLPCGDASL 145
                       G +R R       + S  PCGDAS+
Sbjct:   116 ----LPGTQRGLWRLRPDLSFVFFSSHTPCGDASI 146

GO:0003723 "RNA binding" evidence=IEA;ISO

GO:0008033 "tRNA processing" evidence=IEA;ISO

GO:0008251 "tRNA-specific adenosine deaminase activity" evidence=IEA;ISO

UNIPROTKB|A2VDL0 ADAT1 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 197 (74.4 bits), Expect = 2.3e-25, Sum P(2) = 2.3e-25
 Identities = 56/156 (35%), Positives = 84/156 (53%)

Query:     6 W-GDEVSKKVLWQYKS-LPKKGKPQ-GREVTVLAAFLISSPSKDL-------------EV 49
             W  DE+++     Y S LPK+GKP+  RE T+LAA +   P+ D              EV
Sbjct:     2 WTADEIARLCYEHYGSKLPKQGKPEPNREWTLLAAVVKIQPTADQACDHSDGRVQVTKEV 61

Query:    50 VALGTGTKCIGRSLLSPHGDIVNDSHAEIVARRALLRFFYTEVLNKQKCSNGIEGLRDDV 109
             V++GTGTKCIG+S +   GDI+NDSHAE++ARR+  R+    +L++   +  ++   D +
Sbjct:    62 VSMGTGTKCIGQSKMRKSGDILNDSHAEVIARRSFQRY----LLHQLHLAAALK--EDSI 115

Query:   110 FNNFLFELGPTGKYRFREGWQLHLYISQLPCGDASL 145
             F          G ++ R       + S  PCGDAS+
Sbjct:   116 F----LPGSQRGLWKLRPDLLFVFFSSHTPCGDASI 147

GO:0008251 "tRNA-specific adenosine deaminase activity" evidence=IEA

GO:0008033 "tRNA processing" evidence=IEA

GO:0003723 "RNA binding" evidence=IEA

UNIPROTKB|Q5ZI16 ADAT1 "tRNA-specific adenosine deaminase 1" [Gallus gallus (taxid:9031)]

 Score = 195 (73.7 bits), Expect = 3.6e-25, Sum P(2) = 3.6e-25
 Identities = 58/159 (36%), Positives = 84/159 (52%)

Query:     6 W-GDEVSKKVLWQYKS-LPKKGKPQ-GREVTVLAAFL-ISSPSKDL------------EV 49
             W  DE+++     Y+S LPK+GKP   RE T LAA + + S + +             EV
Sbjct:     2 WTADEIAELCYEHYRSRLPKQGKPDPSREWTSLAAVVKVESAANEAGSAVLGTLQVAKEV 61

Query:    50 VALGTGTKCIGRSLLSPHGDIVNDSHAEIVARRALLRFFYTEV---LNKQKCSNGIEGLR 106
             VALGTGTKCIG + +   GD++NDSHAE+VA+R+  R+   ++    + Q+CS  I G  
Sbjct:    62 VALGTGTKCIGLNKMRKTGDVLNDSHAEVVAKRSFQRYLLHQMRLATSYQQCSIFIPGTE 121

Query:   107 DDVFNNFLFELGPTGKYRFREGWQLHLYISQLPCGDASL 145
                          TGK++ +       + S  PCGDAS+
Sbjct:   122 -------------TGKWKLKPNIIFIFFCSHTPCGDASI 147

GO:0046872 "metal ion binding" evidence=IEA

GO:0003723 "RNA binding" evidence=ISS

GO:0008033 "tRNA processing" evidence=ISS

GO:0008251 "tRNA-specific adenosine deaminase activity" evidence=ISS

UNIPROTKB|F1NE71 ADAT1 "tRNA-specific adenosine deaminase 1" [Gallus gallus (taxid:9031)]

 Score = 195 (73.7 bits), Expect = 3.6e-25, Sum P(2) = 3.6e-25
 Identities = 58/159 (36%), Positives = 84/159 (52%)

Query:     6 W-GDEVSKKVLWQYKS-LPKKGKPQ-GREVTVLAAFL-ISSPSKDL------------EV 49
             W  DE+++     Y+S LPK+GKP   RE T LAA + + S + +             EV
Sbjct:     2 WTADEIAELCYEHYRSRLPKQGKPDPSREWTSLAAVVKVESAANEAGSAGLGSLQVAKEV 61

Query:    50 VALGTGTKCIGRSLLSPHGDIVNDSHAEIVARRALLRFFYTEV---LNKQKCSNGIEGLR 106
             VALGTGTKCIG + +   GD++NDSHAE+VA+R+  R+   ++    + Q+CS  I G  
Sbjct:    62 VALGTGTKCIGLNKMRKTGDVLNDSHAEVVAKRSFQRYLLHQMRLATSYQQCSIFIPGTE 121

Query:   107 DDVFNNFLFELGPTGKYRFREGWQLHLYISQLPCGDASL 145
                          TGK++ +       + S  PCGDAS+
Sbjct:   122 -------------TGKWKLKPNIIFIFFCSHTPCGDASI 147

GO:0003723 "RNA binding" evidence=IEA

GO:0008033 "tRNA processing" evidence=IEA

GO:0008251 "tRNA-specific adenosine deaminase activity" evidence=IEA

MGI|MGI:1353631 Adat1 "adenosine deaminase, tRNA-specific 1" [Mus musculus (taxid:10090)]

 Score = 194 (73.4 bits), Expect = 5.7e-25, Sum P(2) = 5.7e-25
 Identities = 60/157 (38%), Positives = 88/157 (56%)

Query:     6 W-GDEVSKKVLWQYK-SLPKKGKPQ-GREVTVLAAFL-ISS--------PSKDL----EV 49
             W  DE+++     Y   LPK+GKP+  RE T+LAA + I +        P K++    EV
Sbjct:     2 WTADEIAQLCYAHYNVRLPKQGKPEPNREWTLLAAVVKIQASANQACDIPEKEVQVTKEV 61

Query:    50 VALGTGTKCIGRSLLSPHGDIVNDSHAEIVARRALLRFFYTEVLNKQKCSNGIEGLRDDV 109
             V++GTGTKCIG+S +   GDI+NDSHAEI+ARR+  R+    +L++   +     L++D 
Sbjct:    62 VSMGTGTKCIGQSKMRESGDILNDSHAEIIARRSFQRY----LLHQLHLA---AVLKEDS 114

Query:   110 FNNFLFELGPT-GKYRFREGWQLHLYISQLPCGDASL 145
                 +F  G   G +R R       + S  PCGDAS+
Sbjct:   115 ----IFVPGTQRGLWRLRPDLSFVFFSSHTPCGDASI 147

GO:0003723 "RNA binding" evidence=ISO

GO:0004000 "adenosine deaminase activity" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0006396 "RNA processing" evidence=IEA

GO:0008033 "tRNA processing" evidence=ISO

GO:0008152 "metabolic process" evidence=ISS

GO:0008251 "tRNA-specific adenosine deaminase activity" evidence=ISO;ISS

GO:0016787 "hydrolase activity" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	3.5.4	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	221
smart00552	374	smart00552, ADEAMc, tRNA-specific and double-stran	9e-67
pfam02137	329	pfam02137, A_deamin, Adenosine-deaminase (editase)	2e-54

>gnl|CDD|214718 smart00552, ADEAMc, tRNA-specific and double-stranded RNA adenosine deaminase (RNA-specific editase)

 Score =  209 bits (534), Expect = 9e-67
 Identities = 90/231 (38%), Positives = 119/231 (51%), Gaps = 34/231 (14%)

Query: 6   WGDEVSKKVLWQYKSLPKKGKPQGREVTVLAAFLISSPSKDL-EVVALGTGTKCIGRSLL 64
            GDE+S+ VL ++ SLPK GKP  RE T+LA  ++++   +  +VV+LGTGTKCI    L
Sbjct: 2   TGDEISQLVLEKFGSLPKIGKPGLREWTILAGVVMTNGMDNEKQVVSLGTGTKCISGEKL 61

Query: 65  SPHGDIVNDSHAEIVARRALLRFFYTEVLN-KQKCSNGIEGLRDDVFNNFLFELGPTG-K 122
           SP+G ++ND HAEI+ARR  LRF Y+E+        + I            FE    G K
Sbjct: 62  SPNGLVLNDCHAEILARRGFLRFLYSELQLFNSSSEDSI------------FEKNKEGGK 109

Query: 123 YRFREGWQLHLYISQLPCGDASLSSCHSAPRNFFSREGNSLSSVDELNGFKDGIYDSLQH 182
           Y+ +     HLYIS LPCGDAS+ S     +N  S+              K     +   
Sbjct: 110 YKLKSNVLFHLYISTLPCGDASIFSPLEPLKNDDSKH-------PVRKNIKRSKLRTKIE 162

Query: 183 IGR----------VQRKPGR--GDTTLSVSCSDKIARWNAVGVQGLFNYNL 221
           IG           VQ   G   G+  LS+SCSDKIARWN +GVQG    + 
Sbjct: 163 IGEGTVPVRSSDIVQTWDGIGDGERLLSMSCSDKIARWNVLGVQGALLSHF 213

Length = 374

>gnl|CDD|216895 pfam02137, A_deamin, Adenosine-deaminase (editase) domain

 Score =  176 bits (449), Expect = 2e-54
 Identities = 73/174 (41%), Positives = 92/174 (52%), Gaps = 20/174 (11%)

Query: 51  ALGTGTKCIGRSLLSPHGDIVNDSHAEIVARRALLRFFYTEVLNKQKCSNGIEGLRDDVF 110
           +LGTGTKC+G   LS  GDI++D HAEI+ARR  LRF Y ++L         EG    +F
Sbjct: 1   SLGTGTKCLGGEHLSNDGDILHDCHAEILARRGFLRFLYEQLLLLNS-----EGKESSIF 55

Query: 111 NNFLFELGPTGKYRFREGWQLHLYISQLPCGDASLSSCHSA-------PRNFFSREGNSL 163
                     GK+R + G  LHLYIS  PCGDAS+ S           P +  +R+    
Sbjct: 56  E----RGIEEGKFRLKPGVSLHLYISTAPCGDASIFSPAEGLLDSELEPDSHPNRQARGQ 111

Query: 164 SSVDELNGFKDGIYDSLQHIGRVQRKPGR--GDTTLSVSCSDKIARWNAVGVQG 215
                  G   G        G V+ KPGR  G+ TLS+SCSDK+ARWN +GVQG
Sbjct: 112 LRTKIERG--RGTIPVKGSDGVVRTKPGRLDGERTLSMSCSDKLARWNVLGVQG 163

Adenosine deaminases acting on RNA (ADARs) can deaminate adenosine to form inosine. In long double-stranded RNA, this process is non-specific; it occurs site-specifically in RNA transcripts. The former is important in defence against viruses, whereas the latter may affect splicing or untranslated regions. They are primarily nuclear proteins, but a longer isoform of ADAR1 is found predominantly in the cytoplasm. ADARs are derived from the Tad1-like tRNA deaminases that are present across eukaryotes. These in turn belong to the nucleotide/nucleic acid deaminase superfamily and are characterized by a distinct insert between the two conserved cysteines that are involved in binding zinc. Length = 329

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	221
smart00552	374	ADEAMc tRNA-specific and double-stranded RNA adeno	100.0
KOG2777	542	consensus tRNA-specific adenosine deaminase 1 [RNA	100.0
PF02137	343	A_deamin: Adenosine-deaminase (editase) domain; In	100.0
COG0590	152	CumB Cytosine/adenosine deaminases [Nucleotide tra	83.61

>smart00552 ADEAMc tRNA-specific and double-stranded RNA adenosine deaminase (RNA-specific editase)

Probab=100.00  E-value=2.7e-72  Score=515.33  Aligned_cols=201  Identities=43%  Similarity=0.656  Sum_probs=168.0

Q ss_pred             chHHHHHHHHHHHHhcCCCCCCCCCCCcceEEEEEeecCC-CCeEEEEEeeCCCccCcCccCCCCCccchhHHHHHHHHH
Q 027586            5 CWGDEVSKKVLWQYKSLPKKGKPQGREVTVLAAFLISSPS-KDLEVVALGTGTKCIGRSLLSPHGDIVNDSHAEIVARRA   83 (221)
Q Consensus         5 ~~ad~Ia~~v~~~y~~L~~~gkp~~~e~tvLA~iVl~~~~-~~~~vVSLgTGtKc~~~~~l~~~G~~l~D~HAEVLARR~   83 (221)
                      .|||+||++|+++|++||+++||..+||||||||||+++. ++++||||||||||+++++++.+|++||||||||||||+
T Consensus         1 ~~~d~Ia~~v~~~y~~L~k~~kp~~~e~tvLA~iV~~~~~~~~~~vvslgTGtKc~~~~~~~~~G~~lhD~HAEVlArR~   80 (374)
T smart00552        1 DTGDEISQLVLEKFGSLPKIGKPGLREWTILAGVVMTNGMDNEKQVVSLGTGTKCISGEKLSPNGLVLNDCHAEILARRG   80 (374)
T ss_pred             CHHHHHHHHHHHHHHhhhhcCCCCCCCceeEEEEEEEecCCCceEEEEEecCccccchhhhccCCCEEEeCCHHHHHHHH
Confidence            4799999999999999999999999999999999999865 379999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhhhccCCCcccccCCCCcceeEeeCCCC-ceEeeCCcEEEEEeccCCCCccccccCcCCCCCCCCC----
Q 027586           84 LLRFFYTEVLNKQKCSNGIEGLRDDVFNNFLFELGPTG-KYRFREGWQLHLYISQLPCGDASLSSCHSAPRNFFSR----  158 (221)
Q Consensus        84 f~r~Ly~el~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~Lk~~v~lhlYiS~~PCGDAsi~~~~~~~~~~~~~----  158 (221)
                      |+||||+||+++.+.           ..+.||+..+++ +|+||+||+||||||++|||||||+++....++....    
T Consensus        81 f~r~l~~el~~~~~~-----------~~~sif~~~~~~~~~~Lk~~v~lhlYiS~~PCGdAs~~~~~~~~~~~~~~~~~~  149 (374)
T smart00552       81 FLRFLYSELQLFNSS-----------SEDSIFEKNKEGGKYKLKSNVLFHLYISTLPCGDASIFSPLEPLKNDDSKHPVR  149 (374)
T ss_pred             HHHHHHHHHHHHhcc-----------CCCceEEECCCCCceEeCCCcEEEEEeccCCccccccccccccccccccccccc
Confidence            999999999987621           134577776654 9999999999999999999999999876543321000    


Q ss_pred             ----CCCCCCcccccCCccccccccccccceeEeCCCCC--CccceechhHHHHHHHHhhhhhhhccCC
Q 027586          159 ----EGNSLSSVDELNGFKDGIYDSLQHIGRVQRKPGRG--DTTLSVSCSDKIARWNAVGVQGLFNYNL  221 (221)
Q Consensus       159 ----~~~~~~~~~~~~g~~~~~~~~~~~~g~vrtkPGrg--d~t~smSCSDKlarWnvlGlQGaLLS~~  221 (221)
                          ....+......+|+.+     ++..|.||||||||  ++|+||||||||+|||||||||||||||
T Consensus       150 ~~~~~~~~~~~~~~~~g~~~-----~~~~~~vrtkpgr~~~~~t~smSCSDKlarwnvlGlQGaLls~~  213 (374)
T smart00552      150 KNIKRSKLRTKIEIGEGTVP-----VRSSDIVQTWDGIGDGERLLSMSCSDKIARWNVLGVQGALLSHF  213 (374)
T ss_pred             cccccccccccccccCCccc-----ccccCccccCCCCCCCCcccccchhHHHHHHHHhhcchHHHHHH
Confidence                0011112223344432     56689999999998  5799999999999999999999999997

>KOG2777 consensus tRNA-specific adenosine deaminase 1 [RNA processing and modification]

Probab=100.00  E-value=9.1e-68  Score=496.99  Aligned_cols=202  Identities=43%  Similarity=0.691  Sum_probs=172.8

Q ss_pred             cchHHHHHHHHHHHHhcCCCCCCCCCCCcceEEEEEeec-CCCCeEEEEEeeCCCccCcCccCCCCCccchhHHHHHHHH
Q 027586            4 ECWGDEVSKKVLWQYKSLPKKGKPQGREVTVLAAFLISS-PSKDLEVVALGTGTKCIGRSLLSPHGDIVNDSHAEIVARR   82 (221)
Q Consensus         4 ~~~ad~Ia~~v~~~y~~L~~~gkp~~~e~tvLA~iVl~~-~~~~~~vVSLgTGtKc~~~~~l~~~G~~l~D~HAEVLARR   82 (221)
                      ..++|+||++|+++|.+|+++++|..++||||||||++. ...+.+||||||||||++++.|+.+|.+||||||||||||
T Consensus       172 ~~~~~~Ia~lv~~kF~~L~k~~kp~~~~~tvLAgvv~~~~~~~~~~VVslgTGtKcv~g~~ls~~G~iLnDcHAEIlARR  251 (542)
T KOG2777|consen  172 STLGDEIAELVLEKFDELTKNGKPIPREWTVLAGVVMTKRDGEDKKVVSLGTGTKCVSGDKLSPNGLILNDCHAEILARR  251 (542)
T ss_pred             ChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhhhhcccccccceEEEeeccCcccCcceeCCCCCeeecccHHHHHHH
Confidence            568999999999999999999999999999999999987 3457899999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhhhccCCCcccccCCCCcceeEeeCCCC-ceEeeCCcEEEEEeccCCCCccccccCcCCCCC--C-C--
Q 027586           83 ALLRFFYTEVLNKQKCSNGIEGLRDDVFNNFLFELGPTG-KYRFREGWQLHLYISQLPCGDASLSSCHSAPRN--F-F--  156 (221)
Q Consensus        83 ~f~r~Ly~el~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~Lk~~v~lhlYiS~~PCGDAsi~~~~~~~~~--~-~--  156 (221)
                      +|+||||+||+++.+.           ...+||++.+++ +|+||+||.||||||++|||||+|+.......+  . .  
T Consensus       252 ~llRfLy~eL~l~~~~-----------~~~Sif~~~~~~~~~~LK~nv~fhLYiS~~PCGdA~i~~~~~~~~~~~~~~~~  320 (542)
T KOG2777|consen  252 GLLRFLYSELQLYNSE-----------KKDSIFEKSKEGGKFTLKENVLFHLYISTSPCGDARIFLPSEPATKKLKHVNS  320 (542)
T ss_pred             HHHHHHHHHHHHhhcc-----------CCCceeeecCCCCceecCCCcEEEEEecCCCCCchhhhCccccccccCCCCCc
Confidence            9999999999998631           134677766655 699999999999999999999999987543222  1 1  


Q ss_pred             CCCCCCCCcccccCCccccccccccccceeEeCCCC--CCccceechhHHHHHHHHhhhhhhhccCC
Q 027586          157 SREGNSLSSVDELNGFKDGIYDSLQHIGRVQRKPGR--GDTTLSVSCSDKIARWNAVGVQGLFNYNL  221 (221)
Q Consensus       157 ~~~~~~~~~~~~~~g~~~~~~~~~~~~g~vrtkPGr--gd~t~smSCSDKlarWnvlGlQGaLLS~~  221 (221)
                      ......++.++.++|+..     ++..+.|||||||  |++++||||||||+|||||||||||||||
T Consensus       321 ~~~~~~~~~~~~g~g~~~-----~~~~~~V~T~~Gr~~ger~~smSCSDKLaRWNVLGvQGALLsh~  382 (542)
T KOG2777|consen  321 TRRGQLRTKIESGEGTIP-----VGSPDAVQTKPGRLDGERLLSMSCSDKLARWNVLGVQGALLSHF  382 (542)
T ss_pred             hhhhccchhhhccccccc-----cCCCCcccccCCcccCceeeEechHHHHHHHHHHhhHHHHHHHh
Confidence            112233444555666543     6788999999999  99999999999999999999999999997

>PF02137 A_deamin: Adenosine-deaminase (editase) domain; InterPro: IPR002466 Editase (3

Probab=100.00  E-value=1.3e-58  Score=420.21  Aligned_cols=164  Identities=43%  Similarity=0.710  Sum_probs=92.4

Q ss_pred             EEeeCCCccCcCccCCCCCccchhHHHHHHHHHHHHHHHHHHHhhhccCCCcccccCCCCcceeEeeC--CCCceEeeCC
Q 027586           51 ALGTGTKCIGRSLLSPHGDIVNDSHAEIVARRALLRFFYTEVLNKQKCSNGIEGLRDDVFNNFLFELG--PTGKYRFREG  128 (221)
Q Consensus        51 SLgTGtKc~~~~~l~~~G~~l~D~HAEVLARR~f~r~Ly~el~~~~~~~~~~~~~~~~~~~~~i~~~~--~~~~~~Lk~~  128 (221)
                      ||||||||+|.++++.+|++||||||||||||||+||||+||+.+......       ...+.||+..  .+++|+||||
T Consensus         1 SLgTGtKcl~~~~~~~~G~~lhD~HAEVLARR~f~r~L~~el~~~~~~~~~-------~~~~sif~~~~~~~~~~~Lk~~   73 (343)
T PF02137_consen    1 SLGTGTKCLPASKLSSDGRVLHDCHAEVLARRAFLRFLYEELELLLSGGSG-------DKESSIFERNPDGSGKFRLKPG   73 (343)
T ss_dssp             EEEE---B--GGG--TTS-S-SB--HHHHHHHHHHHHHHHHHHHHHH-HH--------HHHHSSEEE-TTSS--EEE-TT
T ss_pred             CccCCCcccCchhcccCCCEEeeCcHHHHHHHHHHHHHHHHHHHHhcCCCc-------cccCceEeecCCCCceeEeCCC
Confidence            799999999999999999999999999999999999999999998631100       0124566655  4679999999


Q ss_pred             cEEEEEeccCCCCccccccCcCCCCCC--CCC---CCCCCCccc---ccCCcccc---ccccccccceeEeCCCCCCccc
Q 027586          129 WQLHLYISQLPCGDASLSSCHSAPRNF--FSR---EGNSLSSVD---ELNGFKDG---IYDSLQHIGRVQRKPGRGDTTL  197 (221)
Q Consensus       129 v~lhlYiS~~PCGDAsi~~~~~~~~~~--~~~---~~~~~~~~~---~~~g~~~~---~~~~~~~~g~vrtkPGrgd~t~  197 (221)
                      |+||||||++|||||||+.+...+.+.  ...   ....+.+..   ...+....   -...++..|++||||||||++.
T Consensus        74 v~lhlY~S~~PCGdAsi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~RtKPgrgd~~~  153 (343)
T PF02137_consen   74 VKLHLYISQAPCGDASIFPLSSSPWESDPPPESDAQSPLRTKITGAKTVPGEPSDPLRGRANYQQLGIVRTKPGRGDRTP  153 (343)
T ss_dssp             EEEEEEESS--TTHHHHS-TT--------------TT--EEEETSSSEEE--SS----------HHHHH-----TT---E
T ss_pred             eEEEEEeccCccCccccccccccccccccccccccccccccccCCCcccCCCccccccccccccCCceeeeeccccCCCc
Confidence            999999999999999999986521110  000   000000000   00010000   1134688999999999999999


Q ss_pred             eechhHHHHHHHHhhhhhhhccCC
Q 027586          198 SVSCSDKIARWNAVGVQGLFNYNL  221 (221)
Q Consensus       198 smSCSDKlarWnvlGlQGaLLS~~  221 (221)
                      ||||||||+|||||||||||||||
T Consensus       154 smSCSDKLarW~vlGlQGaLLS~l  177 (343)
T PF02137_consen  154 SMSCSDKLARWNVLGLQGALLSHL  177 (343)
T ss_dssp             EE-HHHHHHHHHHH-SSHHHHHTT
T ss_pred             ceecccHHHHHHHhccccccHHHh
Confidence            999999999999999999999997

5 from EC) are enzymes that alter mRNA by catalyzing the site-selective deamination of adenosine residue into inosine residue. The editase domain contains the active site and binds three Zn atoms []. Several editases share a common global arrangement of domains, from N to C terminus: two 'double-stranded RNA-specific adenosine deaminase' (DRADA) repeat domains (IPR000607 from INTERPRO), followed by three 'double-stranded RNA binding' (DsRBD) domains (IPR001159 from INTERPRO), followed by the editase domain. Other editases have a simplified domains structure with no DRADA_REP and possibly fewer DSRBD domains. Editase that deaminate cytidine are not detected by this signature.; GO: 0003723 RNA binding, 0004000 adenosine deaminase activity, 0006396 RNA processing; PDB: 1ZY7_B.

>COG0590 CumB Cytosine/adenosine deaminases [Nucleotide transport and metabolism / Translation, ribosomal structure and biogenesis]

Probab=83.61  E-value=8.2  Score=31.41  Aligned_cols=33  Identities=30%  Similarity=0.307  Sum_probs=21.9

Q ss_pred             eEEEEEeeCCCccCcCccCCCCCccchhHHHHHHHHHHHHHH
Q 027586           47 LEVVALGTGTKCIGRSLLSPHGDIVNDSHAEIVARRALLRFF   88 (221)
Q Consensus        47 ~~vVSLgTGtKc~~~~~l~~~G~~l~D~HAEVLARR~f~r~L   88 (221)
                      -+||+-|-.+..-..+-..         ||||+|.|.+-+-+
T Consensus        39 ~~ii~~~~N~~~~~~dpta---------HAEi~air~a~~~~   71 (152)
T COG0590          39 GEIIARGHNRREEDNDPTA---------HAEILAIRAAAETL   71 (152)
T ss_pred             CCEEEEecCccccCCCccc---------cHHHHHHHHHHHhh
Confidence            4788877777544433211         99999999875444

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	221
1zy7_A	403	Crystal Structure Of The Catalytic Domain Of An Ade		6e-24

>pdb|1ZY7|A Chain A, Crystal Structure Of The Catalytic Domain Of An Adenosine Deaminase That Acts On Rna (hadar2) Bound To Inositol Hexakisphosphate (ihp) Length = 403

Iteration: 1
 Score =  107 bits (267), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 79/226 (34%), Positives = 117/226 (51%), Gaps = 30/226 (13%)
Query: 4   ECWGDEVSKKVLWQYKSLPKK-GKPQGREVTVLAAFLISSPS--KDLEVVALGTGTKCIG 60
           +   D VS+ VL ++  L      P  R   VLA  ++++ +  KD +V+++ TGTKCI 
Sbjct: 23  QVLADAVSRLVLGKFGDLTDNFSSPHARR-KVLAGVVMTTGTDVKDAKVISVSTGTKCIN 81
Query: 61  RSLLSPHGDIVNDSHAEIVARRALLRFFYTEV---LNKQKCSNGIEGLRDDVFNNFLFEL 117
              +S  G  +ND HAEI++RR+LLRF YT++   LN +           D     +F+ 
Sbjct: 82  GEYMSDRGLALNDCHAEIISRRSLLRFLYTQLELYLNNK-----------DDQKRSIFQK 130
Query: 118 GPTGKYRFREGWQLHLYISQLPCGDASLSSCHS------APRNFFSREGNSLSSVDELNG 171
              G +R +E  Q HLYIS  PCGDA + S H       A R+   +    L +  E   
Sbjct: 131 SERGGFRLKENVQFHLYISTSPCGDARIFSPHEPILEEPADRHPNRKARGQLRTKIESG- 189
Query: 172 FKDGIYDSLQHIGRVQRKPG--RGDTTLSVSCSDKIARWNAVGVQG 215
             +G    ++    +Q   G  +G+  L++SCSDKIARWN VG+QG
Sbjct: 190 --EGTI-PVRSNASIQTWDGVLQGERLLTMSCSDKIARWNVVGIQG 232
  Database: pdbaa

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	221
1zy7_A	403	RNA-specific adenosine deaminase B1, isoform drada	4e-53

>1zy7_A RNA-specific adenosine deaminase B1, isoform drada2A; alpha/beta deaminase motif, zinc coordination, ionsitol hexakisphosphate, hydrolase; HET: IHP; 1.70A {Homo sapiens} Length = 403

 Score =  174 bits (442), Expect = 4e-53
 Identities = 69/218 (31%), Positives = 103/218 (47%), Gaps = 14/218 (6%)

Query: 4   ECWGDEVSKKVLWQYKSLPKKGKPQGREVTVLAAFLIS--SPSKDLEVVALGTGTKCIGR 61
           +   D VS+ VL ++  L            VLA  +++  +  KD +V+++ TGTKCI  
Sbjct: 23  QVLADAVSRLVLGKFGDLTDNFSSPHARRKVLAGVVMTTGTDVKDAKVISVSTGTKCING 82

Query: 62  SLLSPHGDIVNDSHAEIVARRALLRFFYTEVLNKQKCSNGIEGLRDDVFNNFLFELGPTG 121
             +S  G  +ND HAEI++RR+LLRF YT++       +  +          +F+    G
Sbjct: 83  EYMSDRGLALNDCHAEIISRRSLLRFLYTQLELYLNNKDDQK--------RSIFQKSERG 134

Query: 122 KYRFREGWQLHLYISQLPCGDASLSSCHSAPRNFFS--REGNSLSSVDELNGFKDGIYDS 179
            +R +E  Q HLYIS  PCGDA + S H       +                        
Sbjct: 135 GFRLKENVQFHLYISTSPCGDARIFSPHEPILEEPADRHPNRKARGQLRTKIESGEGTIP 194

Query: 180 LQHIGRVQRKPGR--GDTTLSVSCSDKIARWNAVGVQG 215
           ++    +Q   G   G+  L++SCSDKIARWN VG+QG
Sbjct: 195 VRSNASIQTWDGVLQGERLLTMSCSDKIARWNVVGIQG 232

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	221
1zy7_A	403	RNA-specific adenosine deaminase B1, isoform drada	100.0

>1zy7_A RNA-specific adenosine deaminase B1, isoform drada2A; alpha/beta deaminase motif, zinc coordination, ionsitol hexakisphosphate, hydrolase; HET: IHP; 1.70A {Homo sapiens}

Probab=100.00  E-value=6.8e-70  Score=502.26  Aligned_cols=206  Identities=35%  Similarity=0.546  Sum_probs=163.5

Q ss_pred             CcchHHHHHHHHHHHHhcCCCCCCCCCCCcceEEEEEeecCC--CCeEEEEEeeCCCccCcCccCCCCCccchhHHHHHH
Q 027586            3 TECWGDEVSKKVLWQYKSLPKKGKPQGREVTVLAAFLISSPS--KDLEVVALGTGTKCIGRSLLSPHGDIVNDSHAEIVA   80 (221)
Q Consensus         3 ~~~~ad~Ia~~v~~~y~~L~~~gkp~~~e~tvLA~iVl~~~~--~~~~vVSLgTGtKc~~~~~l~~~G~~l~D~HAEVLA   80 (221)
                      ++.|||+||++|+++|++||+++||...||||||||||+.+.  ++++||||||||||+++++++.+|++||||||||||
T Consensus        22 ~~~~ad~Ia~~v~~~f~~L~~~~kp~~~~~tvLA~iV~~~~~~~~~~~vVslgTGtKc~~~~~~~~~G~vlhD~HAEVlA  101 (403)
T 1zy7_A           22 PQVLADAVSRLVLGKFGDLTDNFSSPHARRKVLAGVVMTTGTDVKDAKVISVSTGTKCINGEYMSDRGLALNDCHAEIIS  101 (403)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTTTSGGGCCSCEEEEEEEESSCGGGCEEEEEEECCCBCCGGGCCTTSCSCSBCCHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHhhcCCCCCCCceEEEEEEEEccCCCCceEEEEEcCCCCccCcccccCCCCeeeeCCHHHHH
Confidence            357899999999999999999999998999999999999752  479999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhhhccCCCcccccCCCCcceeEeeCCCCceEeeCCcEEEEEeccCCCCccccccCcCCCCCC-----
Q 027586           81 RRALLRFFYTEVLNKQKCSNGIEGLRDDVFNNFLFELGPTGKYRFREGWQLHLYISQLPCGDASLSSCHSAPRNF-----  155 (221)
Q Consensus        81 RR~f~r~Ly~el~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~Lk~~v~lhlYiS~~PCGDAsi~~~~~~~~~~-----  155 (221)
                      ||+|+||||+||+.+....       . ....+||++.++++|+||+||+||||||++|||||||+.+.+...+.     
T Consensus       102 RRaf~r~L~~ql~~~~~~~-------~-~~~~sif~~~~~~~~~Lk~~v~lhlY~S~~PCGdAsi~~p~~~~~~~~~~~~  173 (403)
T 1zy7_A          102 RRSLLRFLYTQLELYLNNK-------D-DQKRSIFQKSERGGFRLKENVQFHLYISTSPCGDARIFSPHEPILEEPADRH  173 (403)
T ss_dssp             HHHHHHHHHHHHHHHHHCH-------H-HHHHCSEEECTTSSEEECTTEEEEEEESSCCTTHHHHC--------------
T ss_pred             HHHHHHHHHHHHHHHhccc-------c-CCCCceEEECCCCCeEECCCcEEEEEeccCCCCCcccCCccccccccccccC
Confidence            9999999999998774110       0 11345888888889999999999999999999999999765432110     


Q ss_pred             CC--CCCCCCCcccccCCccccccccccccceeEeCCC--CCCccceechhHHHHHHHHhhhhhhhccCC
Q 027586          156 FS--REGNSLSSVDELNGFKDGIYDSLQHIGRVQRKPG--RGDTTLSVSCSDKIARWNAVGVQGLFNYNL  221 (221)
Q Consensus       156 ~~--~~~~~~~~~~~~~g~~~~~~~~~~~~g~vrtkPG--rgd~t~smSCSDKlarWnvlGlQGaLLS~~  221 (221)
                      +.  ..+..+.+++.++|..+.     ...+.++|+||  ||++|+||||||||+|||||||||||||||
T Consensus       174 ~~~~~~g~lr~k~~~g~g~~p~-----~~~~~~~~~~gvl~g~~t~smSCSDKlarWnvlGlQGaLLs~f  238 (403)
T 1zy7_A          174 PNRKARGQLRTKIESGEGTIPV-----RSNASIQTWDGVLQGERLLTMSCSDKIARWNVVGIQGSLLSIF  238 (403)
T ss_dssp             ---CCTTCCEEEETTCSSCEEC-----CSSCCCCCHHHHHTTCCCEEECHHHHHHHHHHHCSSHHHHHTT
T ss_pred             cchhhccccceeeccCCCCCCC-----CCcccccccccccccCcceeechHHHHHHHHHhccchHHHhhh
Confidence            00  112233333444444321     11234677777  899999999999999999999999999997

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	221
d1wkqa_	158	Guanine deaminase GuaD {Bacillus subtilis [TaxId:	84.86

>d1wkqa_ c.97.1.2 (A:) Guanine deaminase GuaD {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: Cytidine deaminase-like
superfamily: Cytidine deaminase-like
family: Deoxycytidylate deaminase-like
domain: Guanine deaminase GuaD
species: Bacillus subtilis [TaxId: 1423]

Probab=84.86  E-value=1.5  Score=32.79  Aligned_cols=66  Identities=20%  Similarity=0.266  Sum_probs=33.7

Q ss_pred             CCCcchHHHHHHHHHHHHhcCCCCCCCCCCCcceEEEEEeecCCCCeEEEEEeeCCCccCcCccCCCCCccchhHHHHHH
Q 027586            1 MDTECWGDEVSKKVLWQYKSLPKKGKPQGREVTVLAAFLISSPSKDLEVVALGTGTKCIGRSLLSPHGDIVNDSHAEIVA   80 (221)
Q Consensus         1 ~~~~~~ad~Ia~~v~~~y~~L~~~gkp~~~e~tvLA~iVl~~~~~~~~vVSLgTGtKc~~~~~l~~~G~~l~D~HAEVLA   80 (221)
                      ||++.|-...-+++.+....  ..+.|       +.|+|+.+    -+||+-|--.. ..      .++.  -.|||++|
T Consensus         3 m~~~~~M~~Ai~~A~~~~~~--g~~~P-------vGaviv~~----~~ii~~g~n~~-~~------~~~~--t~HAE~~a   60 (158)
T d1wkqa_           3 MNHETFLKRAVTLACEGVNA--GIGGP-------FGAVIVKD----GAIIAEGQNNV-TT------SNDP--TAHAEVTA   60 (158)
T ss_dssp             CCHHHHHHHHHHHHHHHHHT--TSSSS-------CEEEEEET----TEEEEEEECCH-HH------HTCT--TCCHHHHH
T ss_pred             CCHHHHHHHHHHHHHHhhhc--CCCCC-------EEEEEEec----ccceeecccee-ec------cCCC--cccHHHHH
Confidence            77777754444444443321  11222       35666532    27887654321 11      1111  15999999


Q ss_pred             HHHHHHHH
Q 027586           81 RRALLRFF   88 (221)
Q Consensus        81 RR~f~r~L   88 (221)
                      .|...+.|
T Consensus        61 i~~a~~~~   68 (158)
T d1wkqa_          61 IRKACKVL   68 (158)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHhc
Confidence            98764444