Citrus Sinensis ID: 027604

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-
Protein Sequence
MGNCVSSHKSTDMKLTVQIQSPIKENKTVKTDQHMAAGAGQSFLGHTSAMGQADSFRDLSNTEEAFLDSHPWLDSDCEDYFSVNGDLTPSHGSTPVHEKSFIEDPAPQPQLDKIPHTDSVPDSISKPSPTLFELFRESFGDNPANGNQNLHGHNEAIPTISPPKSTRNPFTRSSETTPYRVSHDRKENSIQSAQCCIPSFMRSRSFSERKKRLSSANTDGR
Secondary Structure (PSIPRED)
cccccccccccccccEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccEEEEccccccEEEEEcccccccccccccccccccccccccccccccccccccccccccccHHEccccHHccccccccEEcccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccHccccccccHcccHHHHHcccHHHHcccccccccccc
Coil and Loop (DISEMBL)
mgncvsshkstdmKLTVQIqspikenktvktdqhmaagagqsflghtsamgqadsfrdlsnteeafldshpwldsdcedyfsvngdltpshgstpvheksfiedpapqpqldkiphtdsvpdsiskpsptLFELFResfgdnpangnqnlhghneaiptisppkstrnpftrssettpyrvshdrkensiqsaqccipsfmrsrsfsERKKRLssantdgr
Flexible Loop (DISEMBL)
mgncvsshkstdmkltvqIQSPIKENKTVKTDQHMAAGAGQSFLGHTSAMGQADSFRDLSNTEEAFLDSHPWLDSDCEDYFSVNGDLTPSHGSTPVHEKSFIEDPAPQPQLDKIPHTDSVPDSISKPSPTLFELFRESFGDNPANGNQNLHGHneaiptisppkstrnpftrssettpyrvshdrkensiqsaqccipsfmrsrsfserkkrlssantdgr
Low Complexity Region (SEG)
MGNCVSSHKSTDMKLTVQIQSPIKENKTVKTDQHMAAGAGQSFLGHTSAMGQADSFRDLSNTEEAFLDSHPWLDSDCEDYFSVNGDLTPSHGSTPVHEKSFIEDPAPQPQLDKIPHTDSVPDSISKPSPTLFELFRESFGDNPANGNQNLHGHNEAIPTISPPKSTRNPFTRSSETTPYRVSHDRKENSIQSAQCCIPSFMRSRSFSERKKRLSSANTDGR
Disordered region (IsUnstruct)
*****************************************************************FLDSHPWLDSDCEDYFSV******************************************************************************************************************************************
Disordered Region (DISOPRED)
****************************************************************AFLDSHPWLDSDCEDYFSVNGDLTPSHG***************************************************************************************************SAQCCIPSFM********************
Disordered Region (DISEMBL)
************MKLTVQIQSPIKENKTVKTDQHMAAGAGQSFLGHTSAMGQADSFRDLSNTEEAFLDSHPWLDSDCEDYFSVNGDLTPS**********FIEDPAPQPQLDKIPHTDSVPDSISKPSPTLFELFRESFGDNPANGNQNLHGHNEAIPTISPP**************************IQSAQCCIPSFMRS******************
Disordered Region (DISPRO)
**NCVSSHKSTDMKLTVQIQSPI***************************************EEAFLDSHPWLDSDCEDYFSVNGDLTPSHGSTPVHEKSFIE************************SPTLFELFRESFG***************************************************SAQCCIPSFMRSRS****************
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MGNCVSSHKSTDMKLTVQIQSPIKENKTVKTDQHMAAGAGQSFLGHTSAMGQADSFRDLSNTEEAFLDSHPWLDSDCEDYFSVNGDLTPSHGSTPVHEKSFIEDPAPQPQLDKIPHTDSVPDSISKPSPTLFELFRESFGDNPANGNQNLHGHNEAIPTISPPKSTRNPFTRSSETTPYRVSHDRKENSIQSAQCCIPSFMRSRSFSERKKRLSSANTDGR
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	221	2.2.26 [Sep-21-2011]
Q9LK32	234	Uncharacterized protein A	no	no	0.624	0.589	0.362	9e-06

>sp|Q9LK32|Y3721_ARATH Uncharacterized protein At3g27210 OS=Arabidopsis thaliana GN=Y-2 PE=1 SV=1

 Score = 50.4 bits (119), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 58/160 (36%), Positives = 74/160 (46%), Gaps = 22/160 (13%)

Query: 63  EEAFLDSHPWLDSDCEDYF-SVNGDLTPSHGSTPVHEKSFIEDPAPQPQLDKIPHTDSVP 121
           +E F DS PWL SD +D F SVNGD TPS G+TP   KS   D  P+   + I H     
Sbjct: 82  DETFFDSQPWLQSDSDDDFHSVNGDFTPSLGNTP---KSSFSDRPPRFH-NLIFHEKKPS 137

Query: 122 DSISKPSPT-----LFELFRESFGDNPANGNQNLHGHNEAIPTISPPKSTRNPFTRSSET 176
              S P+P      L ELFR+S         +   G + AI T  P  S  N    S E 
Sbjct: 138 RGSSSPAPLPRRKKLGELFRDSI-----REEREESGSSSAIST--PYLSGAN----SREF 186

Query: 177 TPYRVSHDRKENSIQSAQCCIPSFMR-SRSFSERKKRLSS 215
               +  + K+ S      C+P F     SF ER+K++SS
Sbjct: 187 NDTAIEKEEKKKSNWHHHRCLPGFSSCGGSFMERRKKMSS 226

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	221
225425784	224	PREDICTED: uncharacterized protein LOC10	0.914	0.901	0.433	2e-36
224110720	241	predicted protein [Populus trichocarpa]	0.977	0.896	0.402	3e-36
147845884	266	hypothetical protein VITISV_011296 [Viti	0.977	0.812	0.428	5e-35
255547766	239	conserved hypothetical protein [Ricinus	0.941	0.870	0.425	2e-32
224102293	262	predicted protein [Populus trichocarpa]	0.968	0.816	0.362	9e-28
225452132	247	PREDICTED: uncharacterized protein At3g2	0.941	0.842	0.383	1e-24
255536943	236	conserved hypothetical protein [Ricinus	0.891	0.834	0.375	4e-22
351721050	214	uncharacterized protein LOC100306206 [Gl	0.837	0.864	0.357	3e-20
224055709	328	predicted protein [Populus trichocarpa]	0.660	0.445	0.410	3e-18
449455872	219	PREDICTED: uncharacterized protein At3g2	0.855	0.863	0.358	4e-18

>gi|225425784|ref|XP_002263139.1| PREDICTED: uncharacterized protein LOC100254483 [Vitis vinifera] gi|297738401|emb|CBI27602.3| unnamed protein product [Vitis vinifera]

 Score =  158 bits (399), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 105/242 (43%), Positives = 138/242 (57%), Gaps = 40/242 (16%)

Query: 1   MGNCVSSHKSTD--MKL----------TVQIQSPIKENKTVKTDQHMAAGAGQSFLGHTS 48
           MG+CVS HKS++  MKL          +V  +SP+KEN TV T Q               
Sbjct: 1   MGSCVSVHKSSESTMKLQWSTASKTTDSVLNESPVKEN-TVSTQQFKPQ----------- 48

Query: 49  AMGQADSFRDLSNTEEAFLDSHPWLDSDCEDYFSVNGDLTPSHGSTPVHEKSFIEDPAPQ 108
                 SFR+L + EE F DS PWL+SDCED+FS+NGD TP HG+TP+++ SF E     
Sbjct: 49  ---LTPSFRELGSKEEVFFDSQPWLESDCEDFFSINGDSTPHHGNTPMNQSSFRE----T 101

Query: 109 PQLDKIPHTDSVPDSISKPSPT----LFELFRESFGDNPANGNQNLHG--HNEAIPTISP 162
           P+LD+  H D  P+S+ +PSP+    L ELFRESFGD+P  GNQ+L G   N A   +  
Sbjct: 102 PRLDRSHHMDKSPNSLIEPSPSDKKKLIELFRESFGDDPFVGNQDLQGIESNMANGRLKA 161

Query: 163 PKSTRNPFTR---SSETTPYRVSHDRKENSIQSAQCCIPSFMRSRSFSERKKRLSSANTD 219
             +  +  T    SSE +P +     KE S  SAQCC+P  +RS SFS+RK+R S A+  
Sbjct: 162 KATIFDFLTNRGCSSERSPNKGYKPEKEKSAHSAQCCLPGLVRSLSFSDRKRRPSPAHNI 221

Query: 220 GR 221
            R
Sbjct: 222 RR 223

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224110720|ref|XP_002315614.1| predicted protein [Populus trichocarpa] gi|222864654|gb|EEF01785.1| predicted protein [Populus trichocarpa]

 Score =  157 bits (397), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 99/246 (40%), Positives = 133/246 (54%), Gaps = 30/246 (12%)

Query: 1   MGNCVSSHKSTD--MKLT---------VQIQSPIKENKTVKTDQHMAAGAGQSFLGHTSA 49
           MGNC S  K     MK +         + I+SP+K +  V  D  M           +  
Sbjct: 1   MGNCASVRKKAGPAMKFSCPIDSRGNCIHIESPVKGSSKVYGDHSMTEKLNSKPQSLSPK 60

Query: 50  MGQADSFRDLSNTEEAFLDSHPWLDSDCEDYFSVNGDLTPSHGSTPVHEKSFIEDPAPQP 109
             QA SF D+ N E+ F DSHPW++SDCEDY SV+GD TPS G+TP+H+ S+IE P  + 
Sbjct: 61  PCQA-SFHDMGNQEDMFFDSHPWIESDCEDYLSVDGDFTPSRGTTPIHQGSYIETPPREE 119

Query: 110 QLDKIPHTDSVPDSISKPSPT-----LFELFRESFGDNPANGNQNLHGHNEAIPT---IS 161
            L  I    +   SI++PSP      L ELFRE+   + AN NQ+        P    +S
Sbjct: 120 SLCII----TSARSIAEPSPADMKKQLIELFRENISSDLANNNQSFQDKVNGKPIAAYLS 175

Query: 162 PPKSTRNPF------TRSSETTPYRVSHDRKENSIQSAQCCIPSFMRSRSFSERKKRLSS 215
           P  ++R+P+       RSSETTP+R S   KE    SA CC+P+ +RS SF+ERK+RLS 
Sbjct: 176 PKYTSRSPYQSAESSVRSSETTPHRDSKSGKEKPTHSAHCCLPNVVRSLSFTERKRRLSH 235

Query: 216 ANTDGR 221
           A   G+
Sbjct: 236 AYGGGQ 241

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147845884|emb|CAN80086.1| hypothetical protein VITISV_011296 [Vitis vinifera]

 Score =  153 bits (386), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 107/250 (42%), Positives = 141/250 (56%), Gaps = 34/250 (13%)

Query: 1   MGNCVSSHKSTD--MKL----------TVQIQSPIKENKTVKTDQHMAA------GAGQS 42
           MG+CVS HKS++  MKL          +V  +SP+KEN TV T Q          G G  
Sbjct: 1   MGSCVSVHKSSESTMKLQWSTASKTTDSVLNESPVKEN-TVNTQQFKPQLTPSFPGIGYD 59

Query: 43  FLGHTSAMGQADSFR-DL-SNTEEAFLDSHPWLDSDCEDYFSVNGDLTPSHGSTPVHEKS 100
            L   + +    SF  D   + EE F DS PWL+SDCED+FS+NGD TP HG+TP+++ S
Sbjct: 60  ILFWIAYLHSWFSFGFDYPGSKEEVFFDSQPWLESDCEDFFSINGDSTPHHGNTPMNQSS 119

Query: 101 FIEDPAPQPQLDKIPHTDSVPDSISKPSPT----LFELFRESFGDNPANGNQNLHG--HN 154
           F E     P+LD+  H D  P+S+ +PSP+    L ELFRESFGD+P  GNQ+L G   N
Sbjct: 120 FRE----TPRLDRSHHMDKSPNSLIEPSPSDKKKLIELFRESFGDDPFVGNQDLQGIESN 175

Query: 155 EAIPTISPPKSTRNPFTR---SSETTPYRVSHDRKENSIQSAQCCIPSFMRSRSFSERKK 211
            A   +    +  +  T    SSE +P +     KE S  SAQCC+P  +RS SFS+RK+
Sbjct: 176 MANGRLKXKATIFDFLTNRGCSSERSPNKGYKPEKEKSAHSAQCCLPGLVRSLSFSDRKR 235

Query: 212 RLSSANTDGR 221
           R S A+   R
Sbjct: 236 RPSPAHNICR 245

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255547766|ref|XP_002514940.1| conserved hypothetical protein [Ricinus communis] gi|223545991|gb|EEF47494.1| conserved hypothetical protein [Ricinus communis]

 Score =  144 bits (364), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 103/242 (42%), Positives = 132/242 (54%), Gaps = 34/242 (14%)

Query: 1   MGNCVSSHKSTD--MKL---------TVQIQSPIKENKTVKTDQHMAAGAGQSFLGHTSA 49
           MGNCV + KS +  M L          +QI+SPIK+NK V +D  M+    +  L  ++ 
Sbjct: 1   MGNCVPAQKSREPAMNLKSSINPQENNIQIESPIKDNK-VNSDLSMSERNSK--LQSSAP 57

Query: 50  MGQADSFRDLSNTEEAFLDSHPWLDSDCEDYFSVNGDLTPSHGSTPVHEKSFIEDPAPQP 109
                SFR LSN EE F DS PW+DSD ED+ SVNGD TP  G++P+H+ SFI +    P
Sbjct: 58  SPYGTSFRGLSNREEMFFDSQPWIDSDIEDFLSVNGDFTPLSGASPLHQSSFIRN----P 113

Query: 110 QLDKIPHTDSVPDSISKPSPT-----LFELFRESFGDNPANGNQNLHGHNEAIP-TISPP 163
           Q D+  +  S  +S+ + SPT     L E FRESF  +  + NQNL    EA       P
Sbjct: 114 QCDESIYISSNVNSLPESSPTDMKKQLIEFFRESFSSD-VDDNQNLQDKTEAKSMAFYLP 172

Query: 164 KSTRNPFTR--------SSETTPYRVSHDRKENSIQS-AQCCIPSFMRSRSFSERKKRLS 214
              RN  T         SSE TP    +  K    +S AQCC P+F+RS SFSERKKRL+
Sbjct: 173 SKCRNSNTYESVNSSICSSEATPNGYFNRAKGKPAESEAQCCFPNFVRSLSFSERKKRLN 232

Query: 215 SA 216
           SA
Sbjct: 233 SA 234

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224102293|ref|XP_002312626.1| predicted protein [Populus trichocarpa] gi|222852446|gb|EEE89993.1| predicted protein [Populus trichocarpa]

 Score =  129 bits (324), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 96/265 (36%), Positives = 131/265 (49%), Gaps = 51/265 (19%)

Query: 1   MGNCVSSHKSTD--MKL---------TVQIQSPIKENKTVKTDQHMAAGAGQSFLGHTSA 49
           MGNC S  K T   +KL          + I+SP+K++ TV  D  M           +  
Sbjct: 1   MGNCASVQKKTGPALKLKCTIDSQGNCIHIESPVKDSSTVNGDHSMTEQLNPKPQSLSPV 60

Query: 50  MGQADSFRDL----------------------SNTEEAFLDSHPWLDSDCEDYFSVNGDL 87
             QA S  DL                       N E+ F DSHPW++SDCEDY SV+GD 
Sbjct: 61  PYQA-SVNDLINQIKPPRNYRTSCLKMFVRGQGNREDMFFDSHPWIESDCEDYLSVDGDF 119

Query: 88  TPSHGSTPVHEKSFIEDPAPQPQLDKIPHTDSVPDSISKPSPT-----LFELFRESFGDN 142
           TPS G+TP+H+ S+IE P P  +      + S   SI +PSP      L ELFRE+  D+
Sbjct: 120 TPSCGTTPIHQGSYIEIPLPCEESLC---SSSSARSIPEPSPADRKKQLIELFRENINDD 176

Query: 143 PANGNQNLHG--HNEAIPTISPPKSTR-NPF------TRSSETTPYRVSHDRKENSIQSA 193
             + NQ+     + + I    P K T  +P+       RS+ETTP+  S   KE     +
Sbjct: 177 LVDDNQSFQDTVNGKPIAVYLPSKYTNGSPYQYAESSVRSNETTPHSGSKSGKEKPTHFS 236

Query: 194 QCCIPSFMRSRSFSERKKRLSSANT 218
            CC+P+ +RS SFSER+KRLS A++
Sbjct: 237 HCCLPNIVRSLSFSERRKRLSPAHS 261

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225452132|ref|XP_002262897.1| PREDICTED: uncharacterized protein At3g27210-like [Vitis vinifera]

 Score =  118 bits (296), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 95/248 (38%), Positives = 120/248 (48%), Gaps = 40/248 (16%)

Query: 1   MGNCVSSHKS--TDMKLTVQ---------IQSPIKENKTVKTDQHMAAGAGQSFLGHTSA 49
           MG+CVS H++  + MKL V          I SPIK++ ++          G S     S 
Sbjct: 1   MGSCVSVHRNPHSAMKLKVSFGSKADKLVIPSPIKDHPSIAE----PPIGGLSHKAQWSP 56

Query: 50  MGQADSFRDLSNTEEAFLDSHPWLDSDCEDYFSVNGDLTPSHGSTPVHEKSFIEDPAPQP 109
                 FRD  + EE F DS PWL+SD +D+ SVNGD TPS G+TPVH    I      P
Sbjct: 57  SQPITPFRDFGSKEEIFFDSQPWLESDSDDFHSVNGDFTPSRGNTPVHPNVSIG----TP 112

Query: 110 QLDKIPHTDSVPDSISKPSPT-----LFELFRESF------GDNPANGNQNL-HGHNEAI 157
             +K P  + VP SI  PSPT     L ELF ES        D    G QN+ +G  E  
Sbjct: 113 HANKAPFENRVPASIPTPSPTGRKKKLAELFEESIRNDMDGNDENILGKQNMSNGKMEVK 172

Query: 158 PTIS--PPKSTRN-PFTR------SSETTPYRVSHDRKENSIQSAQCCIPSFMRSRSFSE 208
            TI   PP+S    P         S   TP       KE  ++S QCC+PS   +RSF+E
Sbjct: 173 RTILDFPPESANGTPLASGPNSVCSGGRTPNGDFKSEKEKPLRSTQCCLPSLRLNRSFNE 232

Query: 209 RKKRLSSA 216
           RKK++S A
Sbjct: 233 RKKKMSPA 240

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255536943|ref|XP_002509538.1| conserved hypothetical protein [Ricinus communis] gi|223549437|gb|EEF50925.1| conserved hypothetical protein [Ricinus communis]

 Score =  110 bits (276), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 93/248 (37%), Positives = 122/248 (49%), Gaps = 51/248 (20%)

Query: 1   MGNCVSSHKST---DMKLTVQIQSPIKENKTVK----TDQHMAAGAGQSFLGHTSAMGQA 53
           MG+C S HK T    MKL V   S  K+N  +      D+H+          HT      
Sbjct: 1   MGSCASVHKGTPESAMKLGVSFGSK-KDNLVIPESPIKDKHVN--------DHT----PI 47

Query: 54  DSFRDLSNTEEAFLDSHPWLDSDCED-YFSVNGDLTPSHGSTPVHEKSFIEDPAP-QPQL 111
            +F D  + +E F DS  WLDSDCED +FSVNGD TPS G+TPVH    +  P   +  L
Sbjct: 48  KTFDDHGSKDETFFDSRAWLDSDCEDDFFSVNGDFTPSRGNTPVHHNFSMGTPKINKTTL 107

Query: 112 DKIPHTDSVPDSISKPSPT----LFELFRESFGD-------------NPANGNQNLHGHN 154
           +  P T   P SI +PSPT    L ELFRES  +             N  NG   +    
Sbjct: 108 EGRPPT---PGSIPEPSPTGKKRLSELFRESLREEQEADKLDSSRMQNIGNGKTEV---K 161

Query: 155 EAIPTISPPKSTRNPFTR------SSETTPYRVSHDRKENSIQSAQCCIPSFMRSRSFSE 208
           + I  + P  ++  P+        SSE T    +   +E SI+SAQCC+PS +  RSFS+
Sbjct: 162 QTILDVLPKSASGTPYISGANSVCSSERTANGDALIEREKSIKSAQCCLPSLISCRSFSD 221

Query: 209 RKKRLSSA 216
           RKK++S A
Sbjct: 222 RKKKMSPA 229

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351721050|ref|NP_001235405.1| uncharacterized protein LOC100306206 [Glycine max] gi|255627861|gb|ACU14275.1| unknown [Glycine max]

 Score =  104 bits (260), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 85/238 (35%), Positives = 114/238 (47%), Gaps = 53/238 (22%)

Query: 1   MGNC--VSSHKSTDMKLTVQIQSPIKENKTVKTDQHMAAGAGQSFLGHTSAMGQADSFRD 58
           MG C  V  + + DMKL +   S     K+ K   H +   GQ      S      +F D
Sbjct: 1   MGLCSSVPRNANADMKLKLSFGS-----KSEKLVIHPSPIKGQQPQNGWSTT----TFTD 51

Query: 59  LSNTEEAFLDSHPWLDSDCE-DYFSVNGDLTPSHGSTPVHEKSFIEDPAPQPQLDKIPHT 117
             + EEAF DS  WLDSDCE D++SVNGD TPS G+TP+H  +F             P  
Sbjct: 52  HGSKEEAFFDSKAWLDSDCEDDFYSVNGDFTPSRGTTPIHH-TF-----------GTPSR 99

Query: 118 DSVPDSISKPSP----TLFELFRESFGDNPANGNQNLHGHNEAIPTISPPKSTRNPFTRS 173
             +P S+++ SP     L ELFRES  D+  +G    HG  E  PTI      ++   +S
Sbjct: 100 SRIPGSMAETSPEKKKKLLELFRESVKDDQVDG----HGRKEVKPTI------QDVLPKS 149

Query: 174 SETTPY------------RVSHDR---KENSIQSAQCCIPSFMRSRSFSERKKRLSSA 216
           +  TPY             +S DR   +E  ++S Q CIPS    RSF ER+++ S A
Sbjct: 150 AHCTPYLSEANSACSSERTMSEDRASIREKLVKSLQWCIPSLSSCRSFRERRRKTSPA 207

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224055709|ref|XP_002298614.1| predicted protein [Populus trichocarpa] gi|222845872|gb|EEE83419.1| predicted protein [Populus trichocarpa]

 Score = 97.4 bits (241), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 71/173 (41%), Positives = 91/173 (52%), Gaps = 27/173 (15%)

Query: 63  EEAFLDSHPWLDSDCED-YFSVNGDLTPSHGSTPVHEKSFIEDPAPQPQLDKIPHTDSVP 121
           EE F DS  WLDSDCED ++SVNGD TPS G+TPVH        A  PQ +K P     P
Sbjct: 154 EETFFDSRAWLDSDCEDDFYSVNGDFTPSRGNTPVHHNF----SAGTPQANKNPLEGRPP 209

Query: 122 DSISKPSPT----LFELFRESFGDN--------PANGNQNL-HGHNEAIPTIS---PPKS 165
            S  +PSPT    L ELF++   ++          +G+QN+ +G  E   TI    P  +
Sbjct: 210 GSELEPSPTGKKRLSELFKDRIREDRDVDDLQTSGSGDQNIANGKMEVKQTILDVLPKSA 269

Query: 166 TRNPFTR------SSETTPYRVSHDRKENSIQSAQCCIPSFMRSRSFSERKKR 212
              P+        SSE T    +   KE S +S+ CCIPS +  RSFSERKK+
Sbjct: 270 NATPYLSGTNSVCSSERTANGDALIEKEKSFKSSPCCIPSLIFCRSFSERKKK 322

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449455872|ref|XP_004145674.1| PREDICTED: uncharacterized protein At3g27210-like [Cucumis sativus]

 Score = 97.4 bits (241), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 87/243 (35%), Positives = 114/243 (46%), Gaps = 54/243 (22%)

Query: 1   MGNCVSSHKSTD--MKLTVQIQS----------PIKENKTVKTDQHMAAGAGQSFLGHTS 48
           MG+C S H++ D  MK  + + S          PIK+N T               +  T 
Sbjct: 1   MGSCASIHRNPDSAMKFKLSLASKTTDMEIPPSPIKQNNTP--------------INPTV 46

Query: 49  AMGQADSFRDLSNTEEAFLDSHPWLDSDCED-YFSVNGDLTPSHGSTPVHEKSFIEDPAP 107
            +    S   L + +EAF DS  WLDSDCED ++SVNGD TPS G+TPVH  SF      
Sbjct: 47  FLKSQTSPSHLGSKDEAFFDSRGWLDSDCEDDFYSVNGDFTPSRGNTPVHS-SFSSG--- 102

Query: 108 QPQLDKIPHT-DSVPDSISKPSPT----LFELFRESFGDNPANGNQNLHGHNEAIPTISP 162
            P+++++    D  P +I +PSPT    L ELFRES      NG        +A PT++ 
Sbjct: 103 TPRINQVHGIDDQTPITIPEPSPTGKKRLAELFRES----SRNGTD-----RQAKPTLNE 153

Query: 163 PKSTRNPFTR---------SSETTPYRVSHDRKENSIQSAQCCIPSFMRSRSFSERKKRL 213
                NP T          SSE TP       KE    S QCC+PS     SF +R+K+ 
Sbjct: 154 LALQSNPETPYISGTNSVCSSERTPNGDVWGEKERPFGSVQCCLPSLGSCHSFGDRRKKA 213

Query: 214 SSA 216
           S A
Sbjct: 214 SPA 216

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	221
TAIR|locus:2082284	223	AT3G01860 "AT3G01860" [Arabido	0.914	0.905	0.307	9.8e-16
TAIR|locus:2086533	234	AT3G27210 "AT3G27210" [Arabido	0.828	0.782	0.309	3.4e-13
TAIR|locus:2164511	246	AT5G40860 "AT5G40860" [Arabido	0.814	0.731	0.289	1e-07

TAIR|locus:2082284 AT3G01860 "AT3G01860" [Arabidopsis thaliana (taxid:3702)]

 Score = 197 (74.4 bits), Expect = 9.8e-16, P = 9.8e-16
 Identities = 71/231 (30%), Positives = 115/231 (49%)

Query:     1 MGNCVSSHKSTDMKLT---VQIQSPI-KENKT--VKTDQHMAAGAGQSFLGHTSAMGQAD 54
             MG+CVSS +S     +   V++ S I K + T  +KTD  + +    +  G+       D
Sbjct:     1 MGSCVSSSQSKSSSASDSVVKLASFISKPDSTPPLKTDVMITSS---TINGNPPI----D 53

Query:    55 SFR-DLSNTEEA-FLDSHPWLDSDCEDYF-SVNGDLTPSHGSTPVHEKSFIEDPAPQPQL 111
             S R D  N E+  F DS  WLDSDC+D F SV G+ TPS G+TPVH K F +    Q + 
Sbjct:    54 SGRWDSGNKEDMIFFDSRGWLDSDCDDDFMSVGGEFTPSRGTTPVHHK-FCDQTPHQGEE 112

Query:   112 DKIPHTDSVPD-SISKPSPTLFELFRESFGDNPANGNQNLHGHNEAIPTISPPKSTRNPF 170
             +K  H +   + S +     L ELF+E+  D      ++     +A   +      R P 
Sbjct:   113 NK--HGEEEEEASPTDNKKRLLELFKET-QDEEDEEEEDYVAEGKARACLW----IRTPV 165

Query:   171 TRSSETTPYRVSHDRKEN--SIQSAQC--CIPSFMRSRSFSERKKRLSSAN 217
               S+  TPY  + +R++    ++SA    C+P  +   SF++R++ + +++
Sbjct:   166 RSSAPATPYNNNKERQQKFKRVRSAALGRCVPRLVSCSSFTDRRRNMMTSH 216

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0046686 "response to cadmium ion" evidence=IEP

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0009963 "positive regulation of flavonoid biosynthetic process" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

TAIR|locus:2086533 AT3G27210 "AT3G27210" [Arabidopsis thaliana (taxid:3702)]

 Score = 173 (66.0 bits), Expect = 3.4e-13, P = 3.4e-13
 Identities = 64/207 (30%), Positives = 90/207 (43%)

Query:    17 VQIQSPIKENKTVKTDQHMAAGAGQSFLGHTSAMGQADSFRDLSNTEEAFLDSHPWLDSD 76
             V I SP  +       +  +  A  +     S    + S +   + +E F DS PWL SD
Sbjct:    36 VSILSPSVKKSFESPRKSTSIPANNNLTPVKSRWSFSSSKKSFGSKDETFFDSQPWLQSD 95

Query:    77 CEDYF-SVNGDLTPSHGSTPVHEKSFIEDPAPQPQLDKIPHTDSVPD-SISKPSPT---- 130
              +D F SVNGD TPS G+TP  + SF + P   P+   +   +  P    S P+P     
Sbjct:    96 SDDDFHSVNGDFTPSLGNTP--KSSFSDRP---PRFHNLIFHEKKPSRGSSSPAPLPRRK 150

Query:   131 -LFELFRESFGDNPANGNQNLHGHNEAIPTISPPKSTRNPFTRSSETTPYRVSHDRKENS 189
              L ELFR+S  +          G + AI T  P  S  N    S E     +  + K+ S
Sbjct:   151 KLGELFRDSIREEREES-----GSSSAIST--PYLSGAN----SREFNDTAIEKEEKKKS 199

Query:   190 IQSAQCCIPSFMR-SRSFSERKKRLSS 215
                   C+P F     SF ER+K++SS
Sbjct:   200 NWHHHRCLPGFSSCGGSFMERRKKMSS 226

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0005886 "plasma membrane" evidence=IDA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0009963 "positive regulation of flavonoid biosynthetic process" evidence=RCA

GO:0010286 "heat acclimation" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

TAIR|locus:2164511 AT5G40860 "AT5G40860" [Arabidopsis thaliana (taxid:3702)]

 Score = 138 (53.6 bits), Expect = 1.0e-07, P = 1.0e-07
 Identities = 59/204 (28%), Positives = 86/204 (42%)

Query:    20 QSPIKENKT-VKTDQHMAAGAGQSFLGHTSAMGQADSFRDLSNTEEAFLDSHPWLDSDCE 78
             +SP+KEN   V T + +  G         S      SF   S+ +E + DSH W  SD E
Sbjct:    49 ESPVKENLAPVATPKTVDNGLSAQVKSRWSFSSSKRSFG--SSKDETYFDSHQWQQSDSE 106

Query:    79 D-YFSVNGDLTPSHGSTP---VHEK-SFIEDPAPQPQLDKIPHTDSVPDSISKPSPTLFE 133
             D ++SV GD TPS G+TP   + EK   I  P  + +  ++  + S      K    L E
Sbjct:   107 DDFYSVRGDFTPSVGNTPRCSISEKLPRIHSPLFEGEKPRVSFSHSPAPRRKK----LGE 162

Query:   134 LFRESFGDNPANGNQNLHGHNEAIPTISPPKSTRNPFTRSSETTPYRVSHDRKEN---SI 190
             LFR+S  +  A     L   +E        KS ++    S E      S   K+N    +
Sbjct:   163 LFRDSIREERA---VILEESSE----YQSEKSKKSSCDNSGELKVIEESVKEKKNLKSPL 215

Query:   191 QSAQCCIPSF--MRSRSFSERKKR 212
                  C+P F   +     +RKK+
Sbjct:   216 NYHHRCLPRFSSFKGSLMDKRKKK 239


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.311   0.126   0.373    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      221       221   0.00095  112 3  11 23  0.47    33
                                                     32  0.40    36


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  588 (63 KB)
  Total size of DFA:  176 KB (2102 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  26.09u 0.07s 26.16t   Elapsed:  00:00:03
  Total cpu time:  26.09u 0.07s 26.16t   Elapsed:  00:00:03
  Start:  Sat May 11 00:52:53 2013   End:  Sat May 11 00:52:56 2013

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0010093 "specification of floral organ identity" evidence=RCA

GO:0048440 "carpel development" evidence=RCA

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

No hit with probability above 80.00

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00