Citrus Sinensis ID: 027619


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-
MEKIAVMSVRSIRRAACVRSSIIAAANNHHLRHLSSSRSLFSLSSPAASIPSKSIPFDCRSSLVMSIGCNRSFSEDVAHMPVIRDPEIQRAFKDLMAADWGELPASVIHDAKSALSRNNDDKAGQEVLKNVFSAAEAVEEFIGIIMNIKMEFDDEIGLSVYQRYATYLDAFGPDESYLRKKVETELGSKMIFLKMRCAGLGSEWGKVFYYGCQCHCGILAR
cccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccHHccccccccccccccccccccHHHHHHHHHHHHcccccccHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHcHHHHHHHHHHcccccccccEEEEEcccccccccc
cccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHcccccccccccccccHHcccccHHccccccccccccccccccccHHHHHHHHHHHHccHHHccHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHccHEEEEEEEccccccccccEEEEcccHHHHHccc
MEKIAVMSVRSIRRAACVRSSIIAAANNHhlrhlsssrslfslsspaasipsksipfdcrSSLVmsigcnrsfsedvahmpvirdpEIQRAFKDLMAadwgelpasvIHDAKsalsrnnddkAGQEVLKNVFSAAEAVEEFIGIIMNIKmefddeigLSVYQRYATYldafgpdesylRKKVETELGSKMIFLKMRCaglgsewgKVFYYgcqchcgilar
MEKIAVMSVRSIRRAACVRSSIIAAANNHHLRHLSSSRSLFSLSSPAASIPSKSIPFDCRSSLVMSIGCNRSFSEDVAHMPVIRDPEIQRAFKDLMAADWGELPASVIHDAKSALSRNNDDKAGQEVLKNVFSAAEAVEEFIGIIMNIKMEFDDEIGLSVYQRYATYLdafgpdesylRKKVETELGSKMIFLKMRCAGLGSEWGKVFYYGCQCHCGILAR
MEKIAVMSVRSIRRAACVRSSIIAAANNHhlrhlsssrslfslsspaasipsksipfDCRSSLVMSIGCNRSFSEDVAHMPVIRDPEIQRAFKDLMAADWGELPASVIHDAKSALSRNNDDKAGQEVLKNVFSAAEAVEEFIGIIMNIKMEFDDEIGLSVYQRYATYLDAFGPDESYLRKKVETELGSKMIFLKMRCAGLGSEWGKVFYYGCQCHCGILAR
******MSVRSIRRAACVRSSIIAAANNHHL***********************IPFDCRSSLVMSIGCNRSFSEDVAHMPVIRDPEIQRAFKDLMAADWGELPASVIH*****************VLKNVFSAAEAVEEFIGIIMNIKMEFDDEIGLSVYQRYATYLDAFGPDESYLRKKVETELGSKMIFLKMRCAGLGSEWGKVFYYGCQCHCGIL**
********VRSIRRAACVRSSIIAAANNHHLRHLSSSRS*******************CRSSLVMSIGCNRSFSEDVAHMPVIRDPEIQRAFKDLMAADWGELPASVIHD***************EVLKNVFSAAEAVEEFIGIIMNIKMEFDDEIGLSVYQRYATYLDAFGPDESYLRKKVETELGSKMIFLKMRCAGLGSEWGKVFYYGCQCHCGILA*
********VRSIRRAACVRSSIIAAANNHHLRHLSSSRSLFSLSSPAASIPSKSIPFDCRSSLVMSIGCNRSFSEDVAHMPVIRDPEIQRAFKDLMAADWGELPASVIHDAKSALSRNNDDKAGQEVLKNVFSAAEAVEEFIGIIMNIKMEFDDEIGLSVYQRYATYLDAFGPDESYLRKKVETELGSKMIFLKMRCAGLGSEWGKVFYYGCQCHCGILAR
****AVMSVRSIRRAACVRSSIIAAANNHHLRHLSSSRSLFSLSSPAASIPSKSIPFDCRSSLVMSIGCNRSFSEDVAHMPVIRDPEIQRAFKDLMAADWGELPASVIHDAKSALSRNNDDKAGQEVLKNVFSAAEAVEEFIGIIMNIKMEFDDEIGLSVYQRYATYLDAFGPDESYLRKKVETELGSKMIFLKMRCAGLGSEWGKVFYYGCQCHCGILAR
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MEKIAVMSVRSIRRAACVRSSIIAAANNHHLRHLSSSRSLFSLSSPAASIPSKSIPFDCRSSLVMSIGCNRSFSEDVAHMPVIRDPEIQRAFKDLMAADWGELPASVIHDAKSALSRNNDDKAGQEVLKNVFSAAEAVEEFIGIIMNIKMEFDDEIGLSVYQRYATYLDAFGPDESYLRKKVETELGSKMIFLKMRCAGLGSEWGKVFYYGCQCHCGILAR
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query221 2.2.26 [Sep-21-2011]
Q9SX77257 Uncharacterized protein A yes no 0.859 0.739 0.520 7e-57
>sp|Q9SX77|UMP6_ARATH Uncharacterized protein At1g47420, mitochondrial OS=Arabidopsis thaliana GN=At1g47420 PE=1 SV=1 Back     alignment and function desciption
 Score =  220 bits (560), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 115/221 (52%), Positives = 143/221 (64%), Gaps = 31/221 (14%)

Query: 27  NNHHL-RHLSSSRSLFSLSSPAAS------------IPSKSIPFDCRSSLVMSIGCNRSF 73
            +HH+ +HLS  R+L +++ P AS            I   S+  D +    M +G  R F
Sbjct: 31  GSHHIEKHLSRHRTLITVA-PNASVIGDVQINKGSFISYASVSRDLQYPRAMGMGQVRRF 89

Query: 74  SEDVAHMPVIRDPEIQRAFKDLMAADWGELPASVIHDAKSALSRNNDDKAGQEVLKNVFS 133
           SEDV+HMP + D ++  AFKDLMAADW ELP++V+ DAK+A+S+N DDKAGQE LKNVF 
Sbjct: 90  SEDVSHMPEMEDSDVLNAFKDLMAADWAELPSAVVKDAKTAISKNTDDKAGQEALKNVFR 149

Query: 134 AAEAVEEFIGIIMNIKMEFDDEIGLS-----------------VYQRYATYLDAFGPDES 176
           AAEAVEEF GI+ +IKME DD IG+S                  YQRYA YLD+F P+E 
Sbjct: 150 AAEAVEEFGGILTSIKMEIDDSIGMSGEGVKPLPNDITDALRTAYQRYAEYLDSFEPEEV 209

Query: 177 YLRKKVETELGSKMIFLKMRCAGLGSEWGKVFYYGCQCHCG 217
           YL+KKVE ELG+KMI LKMRC+GLGSEWGKV   G     G
Sbjct: 210 YLKKKVEMELGTKMIHLKMRCSGLGSEWGKVTVLGTSGLSG 250





Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query221
224136704239 predicted protein [Populus trichocarpa] 0.972 0.899 0.585 2e-69
118489030239 unknown [Populus trichocarpa x Populus d 0.972 0.899 0.581 2e-68
225458573242 PREDICTED: uncharacterized protein At1g4 0.972 0.888 0.538 5e-65
255538368238 conserved hypothetical protein [Ricinus 0.954 0.886 0.561 1e-61
297852338260 hypothetical protein ARALYDRAFT_473889 [ 0.864 0.734 0.520 3e-55
18401719257 succinate dehydrogenase 5 [Arabidopsis t 0.859 0.739 0.520 4e-55
351726377225 uncharacterized protein LOC100527337 [Gl 0.701 0.688 0.593 2e-53
449470049241 PREDICTED: uncharacterized protein At1g4 0.963 0.883 0.491 4e-53
351722341228 uncharacterized protein LOC100527668 [Gl 0.932 0.903 0.495 9e-53
388502854238 unknown [Medicago truncatula] 0.723 0.672 0.542 4e-49
>gi|224136704|ref|XP_002326924.1| predicted protein [Populus trichocarpa] gi|118481849|gb|ABK92861.1| unknown [Populus trichocarpa] gi|222835239|gb|EEE73674.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  267 bits (682), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 137/234 (58%), Positives = 161/234 (68%), Gaps = 19/234 (8%)

Query: 1   MEKIAVMSVRSIRRAACVRSSIIAAANNHHLRHLSSSRSLFSLSSPAASIPSKSIPFDCR 60
           MEK+  +  R+I RAAC+ SS  AA +   LRH  +SRSLF++S+P+ S   K IP D R
Sbjct: 1   MEKMGAL--RTIYRAACLGSSRSAAISQSQLRHHLASRSLFTVSAPSVSTTPKRIPCDFR 58

Query: 61  SSLVMSIGCNRSFSEDVAHMPVIRDPEIQRAFKDLMAADWGELPASVIHDAKSALSRNND 120
           S   MS+G +RSFSEDV H P I+DPEI   FKDLMA +W ELP +V+ DAK ALS+N D
Sbjct: 59  SPFAMSLGSSRSFSEDVTHFPDIKDPEILNVFKDLMATNWDELPNAVVSDAKKALSKNTD 118

Query: 121 DKAGQEVLKNVFSAAEAVEEFIGIIMNIKMEFDDEIGLS-----------------VYQR 163
           DK GQE+LKNVF AAEAVEEF G IM++KME DD IGLS                  YQR
Sbjct: 119 DKVGQEILKNVFRAAEAVEEFGGKIMSLKMELDDIIGLSGENVKPLPELHANAIRTFYQR 178

Query: 164 YATYLDAFGPDESYLRKKVETELGSKMIFLKMRCAGLGSEWGKVFYYGCQCHCG 217
           YA YLD+FGP E YLRKKVETELGS+MI+LKMRC GLG+EWGKV   G     G
Sbjct: 179 YAAYLDSFGPGEGYLRKKVETELGSRMIYLKMRCCGLGAEWGKVTVLGTSGLAG 232




Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|118489030|gb|ABK96322.1| unknown [Populus trichocarpa x Populus deltoides] Back     alignment and taxonomy information
>gi|225458573|ref|XP_002284591.1| PREDICTED: uncharacterized protein At1g47420, mitochondrial [Vitis vinifera] gi|147811478|emb|CAN63226.1| hypothetical protein VITISV_002665 [Vitis vinifera] gi|302142337|emb|CBI19540.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|255538368|ref|XP_002510249.1| conserved hypothetical protein [Ricinus communis] gi|223550950|gb|EEF52436.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
>gi|297852338|ref|XP_002894050.1| hypothetical protein ARALYDRAFT_473889 [Arabidopsis lyrata subsp. lyrata] gi|297339892|gb|EFH70309.1| hypothetical protein ARALYDRAFT_473889 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|18401719|ref|NP_564506.1| succinate dehydrogenase 5 [Arabidopsis thaliana] gi|25091506|sp|Q9SX77.1|UMP6_ARATH RecName: Full=Uncharacterized protein At1g47420, mitochondrial; Flags: Precursor gi|5668814|gb|AAD46040.1|AC007519_25 ESTs gb|H36253 and gb|AA04251 come from this gene [Arabidopsis thaliana] gi|12744995|gb|AAK06877.1|AF344326_1 unknown protein [Arabidopsis thaliana] gi|14334512|gb|AAK59453.1| unknown protein [Arabidopsis thaliana] gi|15450966|gb|AAK96754.1| Unknown protein [Arabidopsis thaliana] gi|17104551|gb|AAL34164.1| unknown protein [Arabidopsis thaliana] gi|21536627|gb|AAM60959.1| unknown [Arabidopsis thaliana] gi|23198274|gb|AAN15664.1| Unknown protein [Arabidopsis thaliana] gi|332194047|gb|AEE32168.1| succinate dehydrogenase 5 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|351726377|ref|NP_001238404.1| uncharacterized protein LOC100527337 [Glycine max] gi|255632117|gb|ACU16411.1| unknown [Glycine max] Back     alignment and taxonomy information
>gi|449470049|ref|XP_004152731.1| PREDICTED: uncharacterized protein At1g47420, mitochondrial-like [Cucumis sativus] gi|449496011|ref|XP_004160011.1| PREDICTED: uncharacterized protein At1g47420, mitochondrial-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|351722341|ref|NP_001235705.1| uncharacterized protein LOC100527668 [Glycine max] gi|255632912|gb|ACU16810.1| unknown [Glycine max] Back     alignment and taxonomy information
>gi|388502854|gb|AFK39493.1| unknown [Medicago truncatula] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query221
TAIR|locus:2015428257 SDH5 "AT1G47420" [Arabidopsis 0.461 0.396 0.627 1.3e-49
TAIR|locus:2015428 SDH5 "AT1G47420" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 330 (121.2 bits), Expect = 1.3e-49, Sum P(2) = 1.3e-49
 Identities = 64/102 (62%), Positives = 79/102 (77%)

Query:    58 DCRSSLVMSIGCNRSFSEDVAHMPVIRDPEIQRAFKDLMAADWGELPASVIHDAKSALSR 117
             D +    M +G  R FSEDV+HMP + D ++  AFKDLMAADW ELP++V+ DAK+A+S+
Sbjct:    74 DLQYPRAMGMGQVRRFSEDVSHMPEMEDSDVLNAFKDLMAADWAELPSAVVKDAKTAISK 133

Query:   118 NNDDKAGQEVLKNVFSAAEAVEEFIGIIMNIKMEFDDEIGLS 159
             N DDKAGQE LKNVF AAEAVEEF GI+ +IKME DD IG+S
Sbjct:   134 NTDDKAGQEALKNVFRAAEAVEEFGGILTSIKMEIDDSIGMS 175


GO:0003674 "molecular_function" evidence=ND
GO:0008150 "biological_process" evidence=ND
GO:0005739 "mitochondrion" evidence=IDA
GO:0005634 "nucleus" evidence=IDA
GO:0005749 "mitochondrial respiratory chain complex II" evidence=IDA
GO:0006511 "ubiquitin-dependent protein catabolic process" evidence=RCA
GO:0009853 "photorespiration" evidence=RCA
GO:0051788 "response to misfolded protein" evidence=RCA
GO:0080129 "proteasome core complex assembly" evidence=RCA

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9SX77UMP6_ARATHNo assigned EC number0.52030.85970.7392yesno

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Your Input:
eugene3.00400264
SubName- Full=Putative uncharacterized protein; (240 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query221
pfam14290238 pfam14290, DUF4370, Domain of unknown function (DU 1e-104
PLN02749173 PLN02749, PLN02749, Uncharacterized protein At1g47 3e-79
>gnl|CDD|222654 pfam14290, DUF4370, Domain of unknown function (DUF4370) Back     alignment and domain information
 Score =  300 bits (770), Expect = e-104
 Identities = 137/226 (60%), Positives = 161/226 (71%), Gaps = 24/226 (10%)

Query: 1   MEKIAVMSVRSIRRAACVRSSIIAAANNHH--LRHLSSSRSLFSLSSPAASIPSKSIPFD 58
           MEK+  + +RS+ R+A  RSS  +AA+  H  LRH  SSRSLF L+SPA+      +  D
Sbjct: 1   MEKM--VLLRSLFRSAPFRSSRSSAASQGHHQLRHHLSSRSLFPLASPASP---SRLSSD 55

Query: 59  CRSSLVMSIGCNRSFSEDVAHMPVIRDPEIQRAFKDLMAADWGELPASVIHDAKSALSRN 118
           CR    MS G  R FSEDV H+P I+DPEI+ AFKDLMAA W ELP SV+ DAK ALS+N
Sbjct: 56  CRYPFAMSWGSRRFFSEDVTHLPAIKDPEIENAFKDLMAASWDELPDSVVSDAKKALSKN 115

Query: 119 NDDKAGQEVLKNVFSAAEAVEEFIGIIMNIKMEFDDEIGLS-----------------VY 161
            DDKAGQE LKNVF AAEAVEEF GI++++KME DD IGLS                  Y
Sbjct: 116 TDDKAGQEALKNVFRAAEAVEEFGGILVSLKMELDDLIGLSGENVKPLPDYIENALRTAY 175

Query: 162 QRYATYLDAFGPDESYLRKKVETELGSKMIFLKMRCAGLGSEWGKV 207
           QRY+TYLD+FGP+E YLRKKVETELG+KMI LKMRC+GLGSEWGKV
Sbjct: 176 QRYSTYLDSFGPEEGYLRKKVETELGTKMIHLKMRCSGLGSEWGKV 221


Length = 238

>gnl|CDD|178350 PLN02749, PLN02749, Uncharacterized protein At1g47420 Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 221
PF14290239 DUF4370: Domain of unknown function (DUF4370) 100.0
PLN02749173 Uncharacterized protein At1g47420 100.0
>PF14290 DUF4370: Domain of unknown function (DUF4370) Back     alignment and domain information
Probab=100.00  E-value=3.2e-111  Score=727.05  Aligned_cols=216  Identities=62%  Similarity=0.973  Sum_probs=205.5

Q ss_pred             CchhhhHHHHHHHHHHhhhhhhHHHh--hhhhhhhhhccccccccCCCCCCCCCCCCCCCcCCcccccccccccccccCC
Q 027619            1 MEKIAVMSVRSIRRAACVRSSIIAAA--NNHHLRHLSSSRSLFSLSSPAASIPSKSIPFDCRSSLVMSIGCNRSFSEDVA   78 (221)
Q Consensus         1 mek~~m~~lrs~~r~a~~~s~~~~~~--~~~~~~h~s~~~sl~t~~~~~~~~ps~~~~~d~~~~~s~~~~~~R~fS~d~~   78 (221)
                      ||| ||+.||++||++|++|++.++.  .+|+++|..+.+++++++++.+  +. ++++||++||++|||++|+||+|++
T Consensus         1 m~~-~~~~lr~~~R~~~~~s~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~--~~-~~~s~~~~~~a~s~~~~R~fS~d~~   76 (239)
T PF14290_consen    1 MEK-AMSALRSLLRSAALRSSRSSSASRSHHQIRHHLSSRSLFTLSSPSS--RN-RISSDCGGPFAMSWGSRRFFSEDVS   76 (239)
T ss_pred             Cch-HHHHHHHHHHHHHHHHhhhhhhhcchhhhhhhhhhccccCCCCccc--cc-cccccccCCcccccchhhhcccccc
Confidence            887 5999999999999999987555  3377788558999999988873  33 8899999999999999999999999


Q ss_pred             CCCCCCCHHHHHHHHHHHHcccCCCchhHHHHHHhhhcccCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhccch
Q 027619           79 HMPVIRDPEIQRAFKDLMAADWGELPASVIHDAKSALSRNNDDKAGQEVLKNVFSAAEAVEEFIGIIMNIKMEFDDEIGL  158 (221)
Q Consensus        79 hlP~i~Dpei~~afKdLmAasW~elp~svv~~ak~alSk~tdDkAGqeaLknvfrAAeAvEeFgGiL~~LrmeiDDl~Gl  158 (221)
                      |||+|+||||++|||||||+||+|||++||++|||||||||||+||||||+||||||||||||||+|++|||||||||||
T Consensus        77 hlP~i~Dp~i~~afKdLmAasW~elp~svv~~akkalSk~tdD~AGqeaL~nvfRAAeAvEeFgG~L~tLrm~idDl~Gl  156 (239)
T PF14290_consen   77 HLPAISDPEIEKAFKDLMAASWDELPDSVVNEAKKALSKNTDDKAGQEALKNVFRAAEAVEEFGGILVTLRMEIDDLCGL  156 (239)
T ss_pred             cCCCCCCHHHHHHHHHHHhcchhhCCHHHHHHHHHHHhccCccchhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHhcCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             h-----------------HHHHHHHHHhhcCCChhHHHHHHHHhhhhhhhhhhhhhcCCCCCcceeEEeeccccccccc
Q 027619          159 S-----------------VYQRYATYLDAFGPDESYLRKKVETELGSKMIFLKMRCAGLGSEWGKVFYYGCQCHCGILA  220 (221)
Q Consensus       159 s-----------------~y~rY~~YLdsFgpdE~yLrKKVE~ELGtkmI~LKmRcsGlgseWGKVtllGTSg~sgsy~  220 (221)
                      |                 +|+||++|||||||||+|||||||+|||+|||||||||||||||||||||||||||||||.
T Consensus       157 sGEnv~PLP~~~~~Al~t~y~rY~~YL~sFgp~E~yLrKKVE~ELGtkmi~lKmRcsGlg~eWgkvtllGTSGlsGSYv  235 (239)
T PF14290_consen  157 SGENVKPLPDYIENALRTAYKRYMTYLDSFGPDEHYLRKKVEMELGTKMIHLKMRCSGLGSEWGKVTLLGTSGLSGSYV  235 (239)
T ss_pred             CCCCCCCCcHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHhhhhHHHHhhhhcCCCcccceeeEeecCcCccchh
Confidence            9                 9999999999999999999999999999999999999999999999999999999999995



>PLN02749 Uncharacterized protein At1g47420 Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00