Citrus Sinensis ID: 027687

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220
Protein Sequence
MAATFFPFLSQPNSPLFNHFTSKNQTSRNPSQRSYNSIKCSNTSNNSTPVPAQPEDESFPSPYPNSIATESSDTFPIEKRRKSEILRERRARTGLVKPEPPNFEVGWKRTKEISLEKPIGFVIMDFLEKLQGLMERDYGSTALLAKVGELVAERAREEAEVLRDEGKVEERMVTELSRVLRLMEMDMAMVKAAVKEETLSERLEQAKARCRQAILVANSF
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHcHHHHHHHHHHccccccccccccccccEEcccccccccccHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
ccccHccccccccccHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHcccccHHcHHHHHcHccccccccccEEEcEccccccccccccEEHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Coil and Loop (DISEMBL)
maatffpflsqpnsplfnhftsknqtsrnpsqrsynsikcsntsnnstpvpaqpedesfpspypnsiatessdtfpiekRRKSEILRERRartglvkpeppnfevgwkrtkeislekpiGFVIMDFLEKLQGLMERDYGSTALLAKVGELVAERAREEAEVLRDEGKVEERMVTELSRVLRLMEMDMAMVKAAVKEETLSERLEQAKARCRQAILVANSF
Flexible Loop (DISEMBL)
maatffpflsqpnsplFNHFTSknqtsrnpsqrsynSIKCSNTSNNSTPVPAQPEDESFPSPYPNsiatessdtfpiekrrkseilrerrartglvkpeppnfevgwkrtkeislekpigFVIMDFLEKLQGLMERDYGSTALLAKVGELVAERAREEaevlrdegkveermVTELSRVLRLMEMDMAMVKAAVKEETLSERLEQAKARCRQailvansf
Low Complexity Region (SEG)
MAATFFPFLSQPNSPLFNHFTSKNQTSRNPSQRSYNSIKCSNTSNNSTPVPAQPEDESFPSPYPNSIATESSDTFPIEKRRKSEILRERRARTGLVKPEPPNFEVGWKRTKEISLEKPIGFVIMDFLEKLQGLMERDYGSTALLAKVGelvaerareeaevlrDEGKVEERMVTELSRVLRLMEMDMAMVKAAVKEETLSERLEQAKARCRQAILVANSF
Disordered region (IsUnstruct)
******************************************************************************************************FEVGWKRTKEISLEKPIGFVIMDFLEKLQGLMERDYGSTALLAKVGELVAE*******************VTELSRVLRLMEMDMAMVK*****************************
Disordered Region (DISOPRED)
***TFF*FLSQPNSPLFN************************************************IATESSDTFP**************************FEVGWKRTKEISLEKPIGFVIMDFLEKLQGLMERDYGSTALLAKVGELVAERAREEAEVLRDEGKVEERMVTELSRVLRLMEMDMAMVKA***************ARCRQAILVANSF
Disordered Region (DISEMBL)
MAATFFPFLSQPNSPLFNHFTS*************NSIKCS*****************FPSPYPNSIATESSDTFPIEKRRKSEILRERRARTGLVKPEPPNFEVGWKRTKEISLEKPIGFVIMDFLEKLQGLMERDYGSTALLAKVGELVAERAREEAEVLRDEGKVEERMVTELSRVLRLMEMDMAMVKAAVKEETLSERLEQAKARCRQAILVANSF
Disordered Region (DISPRO)
****FFPFLSQPNSPLFNHFT***************************************************************ILRERRARTGLVKPEPPNFEVGWKRTKEISLEKPIGFVIMDFLEKLQGLMERDYGSTALLAKVGELVAERAREEAEVLRDEGKVEERMVTELSRVLRLMEMDMAMVKAAVKEETLSERLEQAKARCRQAILVANSF
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAATFFPFLSQPNSPLFNHFTSKNQTSRNPSQRSYNSIKCSNTSNNSTPVPAQPEDESFPSPYPNSIATESSDTFPIEKRRKSEILRERRARTGLVKPEPPNFEVGWKRTKEISLEKPIGFVIMDFLEKLQGLMERDYGSTALLAKVGELVxxxxxxxxxxxxxxxxxxxxxVTELSRVLRLMEMDMAxxxxxxxxxxxxxxxxxxxxxCRQAILVANSF
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	220
255563671	227	conserved hypothetical protein [Ricinus	0.981	0.951	0.627	6e-73
449470411	213	PREDICTED: uncharacterized protein LOC10	0.945	0.976	0.662	9e-73
225461116	218	PREDICTED: uncharacterized protein LOC10	0.963	0.972	0.659	2e-70
224115218	223	predicted protein [Populus trichocarpa]	0.972	0.959	0.633	3e-70
356549829	213	PREDICTED: uncharacterized protein LOC10	0.963	0.995	0.656	3e-68
357452713	215	hypothetical protein MTR_2g082930 [Medic	0.972	0.995	0.606	5e-68
356543940	212	PREDICTED: uncharacterized protein LOC10	0.954	0.990	0.630	5e-66
18403352	211	uncharacterized protein [Arabidopsis tha	0.804	0.838	0.707	4e-64
297847470	211	hypothetical protein ARALYDRAFT_474225 [	0.927	0.966	0.635	4e-64
302143217	220	unnamed protein product [Vitis vinifera]	0.909	0.909	0.640	1e-62

>gi|255563671|ref|XP_002522837.1| conserved hypothetical protein [Ricinus communis] gi|223537921|gb|EEF39535.1| conserved hypothetical protein [Ricinus communis]

 Score =  279 bits (714), Expect = 6e-73,   Method: Compositional matrix adjust.
 Identities = 145/231 (62%), Positives = 179/231 (77%), Gaps = 15/231 (6%)

Query: 1   MAATFFPFLSQPNSPLFNHFTSKNQTSRNPS-----------QRSYNSIKCSNTSNNSTP 49
           MA+TF   L+QPN  + NH     Q SRNPS           + +++SIKC+ ++N+S+ 
Sbjct: 1   MASTFLQSLTQPNPLILNH-QYPTQISRNPSIFIIQNDQTPKRTNFSSIKCT-SNNSSSQ 58

Query: 50  VPAQPEDESFPSPYPNSIATESSDTFPIEKRRKSEILRERRARTGLVKPEPPNFEVGWKR 109
            P   +D  +P PY  S    + DTFPIEKRR+SEILRER+ +  L + +PPNFE+GWKR
Sbjct: 59  EPTFNDDTQYPIPY--STTLNNKDTFPIEKRRQSEILRERKQKQELSRGDPPNFEIGWKR 116

Query: 110 TKEISLEKPIGFVIMDFLEKLQGLMERDYGSTALLAKVGELVAERAREEAEVLRDEGKVE 169
           TK++ LEKP G+VIMDFL KL+ LM +++GST+LLAK GE+VAERAREEAEVLRDEGKVE
Sbjct: 117 TKQVQLEKPKGYVIMDFLGKLEELMGKEFGSTSLLAKAGEIVAERAREEAEVLRDEGKVE 176

Query: 170 ERMVTELSRVLRLMEMDMAMVKAAVKEETLSERLEQAKARCRQAILVANSF 220
           +RMVTEL RVL+LMEMD+AMVKA+VKEETLSERLEQAKARCRQAILVANSF
Sbjct: 177 DRMVTELFRVLKLMEMDLAMVKASVKEETLSERLEQAKARCRQAILVANSF 227

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449470411|ref|XP_004152910.1| PREDICTED: uncharacterized protein LOC101210146 [Cucumis sativus]

 Score =  278 bits (712), Expect = 9e-73,   Method: Compositional matrix adjust.
 Identities = 149/225 (66%), Positives = 178/225 (79%), Gaps = 17/225 (7%)

Query: 1   MAATFFPFLSQPNSPLF---NH--FTSKNQTSRNPSQRSYNSIKCSNTSNNSTPVPAQPE 55
           MA++   FLS PN  L    +H  FT+  Q +   S+R   SIKC++  + S P      
Sbjct: 1   MASSHLHFLSTPNPILLLPQSHPSFTTPLQIT---SKRDL-SIKCNSQDSESDP------ 50

Query: 56  DESFPSPYPNSIATESSDTFPIEKRRKSEILRERRARTGLVKPEPPNFEVGWKRTKEISL 115
             +FPSP PN  A    +TFPIEKRR+S+ILR+R+  T + KPEPPNFE+GWKRTKEIS+
Sbjct: 51  --NFPSPDPNFGALNQPETFPIEKRRRSDILRQRKPSTEIAKPEPPNFEIGWKRTKEISV 108

Query: 116 EKPIGFVIMDFLEKLQGLMERDYGSTALLAKVGELVAERAREEAEVLRDEGKVEERMVTE 175
           EKPIG++IMDFLEKL+GLMER++GST LLAKVGE+VAERAREEAE+LRD+GKVEERMVTE
Sbjct: 109 EKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVEERMVTE 168

Query: 176 LSRVLRLMEMDMAMVKAAVKEETLSERLEQAKARCRQAILVANSF 220
           L RVL+LMEMD+AMVKAAVK+ETLSERL QAKARCRQAILVANSF
Sbjct: 169 LFRVLKLMEMDLAMVKAAVKDETLSERLGQAKARCRQAILVANSF 213

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225461116|ref|XP_002279843.1| PREDICTED: uncharacterized protein LOC100258940 [Vitis vinifera]

 Score =  270 bits (691), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 149/226 (65%), Positives = 176/226 (77%), Gaps = 14/226 (6%)

Query: 1   MAATFFPFLSQPNSPLFNHFTSKNQTSRNPSQRSYNSIKCSNTSN------NSTPVPAQP 54
           MA+TF  F++  N  L +H    NQ    PSQ S + ++  +  N      N T  P+ P
Sbjct: 1   MASTFLRFITHVNPLLLHH----NQ----PSQTSNSLLRIHHLPNPKPFTVNCTTPPSSP 52

Query: 55  EDESFPSPYPNSIATESSDTFPIEKRRKSEILRERRARTGLVKPEPPNFEVGWKRTKEIS 114
           +   FP+PYPNS  T + +TFPIEKRRKSEI+R+R+ART L KPEPPNFEVGWKR+K I 
Sbjct: 53  DPPDFPNPYPNSDTTNNVETFPIEKRRKSEIIRDRKARTKLEKPEPPNFEVGWKRSKVIE 112

Query: 115 LEKPIGFVIMDFLEKLQGLMERDYGSTALLAKVGELVAERAREEAEVLRDEGKVEERMVT 174
           LEKP G+VI DFLEKL+ LM R++GST LLAK GE+VAERAREEAEVLRDEG+V+ER+VT
Sbjct: 113 LEKPKGYVIADFLEKLEELMGREFGSTELLAKTGEIVAERAREEAEVLRDEGEVDERLVT 172

Query: 175 ELSRVLRLMEMDMAMVKAAVKEETLSERLEQAKARCRQAILVANSF 220
           EL RVLRLMEMD+AMVKAAVKEETLSERL+QAKARCRQAILVANSF
Sbjct: 173 ELFRVLRLMEMDLAMVKAAVKEETLSERLKQAKARCRQAILVANSF 218

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224115218|ref|XP_002316975.1| predicted protein [Populus trichocarpa] gi|222860040|gb|EEE97587.1| predicted protein [Populus trichocarpa]

 Score =  270 bits (691), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 145/229 (63%), Positives = 176/229 (76%), Gaps = 15/229 (6%)

Query: 1   MAATFFPFLSQPNSPLFNHFTSKNQTSRNPS--------QRSYNSIKCSNTSNNSTPVPA 52
           MA+T    LS PN    N    ++QT   PS           + SIKC  TS+NS P+  
Sbjct: 1   MASTLLHSLSFPNPLCLNQLY-QSQTPTTPSTLPFRKDQHSHFFSIKC--TSSNSAPLTE 57

Query: 53  QPEDES-FPSPYPNSIATESSDTFPIEKRRKSEILRERRARTGLVKPEPPNFEVGWKRTK 111
             + ES FP P   ++   ++  +PIEKRR+S+I+R+R+A+T LVK EPPN+EVGWKRTK
Sbjct: 58  SDDTESSFPPPVSTTL---NNSDYPIEKRRRSQIIRDRKAKTDLVKGEPPNYEVGWKRTK 114

Query: 112 EISLEKPIGFVIMDFLEKLQGLMERDYGSTALLAKVGELVAERAREEAEVLRDEGKVEER 171
           EI LEKP+G+VIMDFL+KL  LM++++GSTALLAKVGE+VAERAREEAEVLRDEGKVE+R
Sbjct: 115 EIKLEKPVGYVIMDFLDKLVELMDKEFGSTALLAKVGEIVAERAREEAEVLRDEGKVEDR 174

Query: 172 MVTELSRVLRLMEMDMAMVKAAVKEETLSERLEQAKARCRQAILVANSF 220
           MVTEL RVL+LMEMD+AMVKAAVKEETL+ERLEQAKARCRQAILVA SF
Sbjct: 175 MVTELFRVLKLMEMDLAMVKAAVKEETLNERLEQAKARCRQAILVAISF 223

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356549829|ref|XP_003543293.1| PREDICTED: uncharacterized protein LOC100804209 [Glycine max]

 Score =  263 bits (672), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 145/221 (65%), Positives = 173/221 (78%), Gaps = 9/221 (4%)

Query: 1   MAATFFPFLSQPNSPLFNHF-TSKNQTSRNPSQRSYNSIKCSNTSNNSTPVPAQPEDESF 59
           MA+T F +     SPL  H  T  ++TS NPS+ S +     + S   T + + PE E F
Sbjct: 1   MASTVFSY----PSPL--HLKTYPHKTSSNPSEFSIHIQPKKHFSIRCTSLDSIPEAE-F 53

Query: 60  PSPYPNSIATESSDTFPIEKRRKSEILRERRARTGLVKPEPPNFEVGWKRTKEISLEKPI 119
           P+P P+S    S+++FPIEKRR+SEI+RERR    LV+PEPPNFE+GWKRTKEI+LE+PI
Sbjct: 54  PTPDPSSSTVNSAESFPIEKRRRSEIVRERRGEK-LVQPEPPNFEIGWKRTKEINLERPI 112

Query: 120 GFVIMDFLEKLQGLMERDYGSTALLAKVGELVAERAREEAEVLRDEGKVEERMVTELSRV 179
           G VI DFLEKL+ LME+++GST LLAKVGE+VAERAREEAE+L DEGKVEERMVTEL RV
Sbjct: 113 GHVIADFLEKLETLMEKEFGSTELLAKVGEIVAERAREEAEILMDEGKVEERMVTELFRV 172

Query: 180 LRLMEMDMAMVKAAVKEETLSERLEQAKARCRQAILVANSF 220
           L+LMEMD+AMVKAAVKEETL ERLE AKARCRQAILVA SF
Sbjct: 173 LKLMEMDLAMVKAAVKEETLGERLELAKARCRQAILVAYSF 213

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357452713|ref|XP_003596633.1| hypothetical protein MTR_2g082930 [Medicago truncatula] gi|355485681|gb|AES66884.1| hypothetical protein MTR_2g082930 [Medicago truncatula] gi|388514519|gb|AFK45321.1| unknown [Medicago truncatula]

 Score =  263 bits (671), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 134/221 (60%), Positives = 171/221 (77%), Gaps = 7/221 (3%)

Query: 1   MAATFFPFLSQPN-SPLFNHFTSKNQTSRNPSQRSYNSIKCSNTSNNSTPVPAQPEDESF 59
           MA+TF  + +  +   LF   TS   ++ N   + +  IKC+   N+++   ++PE   F
Sbjct: 1   MASTFLTYPAPHHLHNLFQTNTSSQLSTHNNKTKKHFIIKCTTPLNSTS---SEPE---F 54

Query: 60  PSPYPNSIATESSDTFPIEKRRKSEILRERRARTGLVKPEPPNFEVGWKRTKEISLEKPI 119
           P+P P +    S +TFPIEKRR+SEI+R+RR  T L   EPPNFE+GWKRTKEI+LEKP+
Sbjct: 55  PTPDPTNTTMNSPETFPIEKRRRSEIIRQRRPNTDLANAEPPNFEIGWKRTKEINLEKPV 114

Query: 120 GFVIMDFLEKLQGLMERDYGSTALLAKVGELVAERAREEAEVLRDEGKVEERMVTELSRV 179
           G+V+ DFLEKL+ LM++++GST LLAKVGE+VAERAREEAE+LRDEGKVEERMV EL RV
Sbjct: 115 GYVVADFLEKLEELMKKEFGSTELLAKVGEIVAERAREEAEILRDEGKVEERMVVELFRV 174

Query: 180 LRLMEMDMAMVKAAVKEETLSERLEQAKARCRQAILVANSF 220
           LRLMEMD+AMVKA+VKE+TL+ERL+QAKARCRQAILV  SF
Sbjct: 175 LRLMEMDLAMVKASVKEDTLNERLDQAKARCRQAILVCYSF 215

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356543940|ref|XP_003540416.1| PREDICTED: uncharacterized protein LOC100811126 [Glycine max]

 Score =  256 bits (653), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 140/222 (63%), Positives = 173/222 (77%), Gaps = 12/222 (5%)

Query: 1   MAATFFPFLSQPNSPLFNHFTSKNQT--SRNPSQRSYNSIKCSNTSNNSTPVPAQPEDES 58
           MA+T F + S  +  ++   TS N++  S +   + + SI+C  TS +STP      +  
Sbjct: 1   MASTVFSYPSL-HLNIYPQKTSSNRSEFSIHIQPKKHFSIRC--TSLDSTP------EAD 51

Query: 59  FPSPYPNSIATESSDTFPIEKRRKSEILRERRARTGLVKPEPPNFEVGWKRTKEISLEKP 118
           FP+P P+S    S+++FPIEKRR+SEI+R+RR    LV+PEPPNFE+GWKRTKEI+LE+P
Sbjct: 52  FPTPDPSSSTVNSAESFPIEKRRRSEIVRKRRGEK-LVQPEPPNFEIGWKRTKEINLERP 110

Query: 119 IGFVIMDFLEKLQGLMERDYGSTALLAKVGELVAERAREEAEVLRDEGKVEERMVTELSR 178
           IG VI DFLEKL+ LM +++GST LLAKVGE+VAERAREEAE+L DEGKVEERMVTEL R
Sbjct: 111 IGHVIADFLEKLETLMGKEFGSTELLAKVGEIVAERAREEAEILMDEGKVEERMVTELFR 170

Query: 179 VLRLMEMDMAMVKAAVKEETLSERLEQAKARCRQAILVANSF 220
           VL+LMEMD+AMVKAAVKEETL ERLE AKARCRQAILVA SF
Sbjct: 171 VLKLMEMDLAMVKAAVKEETLGERLELAKARCRQAILVAYSF 212

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18403352|ref|NP_564582.1| uncharacterized protein [Arabidopsis thaliana] gi|12320779|gb|AAG50534.1|AC079828_5 hypothetical protein [Arabidopsis thaliana] gi|21592685|gb|AAM64634.1| unknown [Arabidopsis thaliana] gi|107738282|gb|ABF83672.1| At1g51100 [Arabidopsis thaliana] gi|110737657|dbj|BAF00768.1| hypothetical protein [Arabidopsis thaliana] gi|332194501|gb|AEE32622.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  249 bits (637), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 128/181 (70%), Positives = 152/181 (83%), Gaps = 4/181 (2%)

Query: 43  TSNNSTPVPAQPED-ESFP--SPYPNSIATESSDTFPIEKRRKSEILRERRARTGLVKPE 99
           T+  ST   + PE  + F   +P P SI T S++ FPIEKRR+SEI+R+R  R G+ KPE
Sbjct: 32  TTKFSTKCSSNPESKDQFINLTPAPESINTTSAEKFPIEKRRRSEIIRDRTQR-GIEKPE 90

Query: 100 PPNFEVGWKRTKEISLEKPIGFVIMDFLEKLQGLMERDYGSTALLAKVGELVAERAREEA 159
           PPNFE+GWKRTKEI+LEKP G+VIMDFLEK + LM R++GS  LLAK GE+VAERAREEA
Sbjct: 91  PPNFEIGWKRTKEINLEKPKGYVIMDFLEKFEALMAREFGSKELLAKAGEIVAERAREEA 150

Query: 160 EVLRDEGKVEERMVTELSRVLRLMEMDMAMVKAAVKEETLSERLEQAKARCRQAILVANS 219
           EVLRDEGKVEERMVTEL RVL+LMEMD+AMVKA+VK+ETLS+R+EQA+ARCRQAILVANS
Sbjct: 151 EVLRDEGKVEERMVTELFRVLKLMEMDLAMVKASVKDETLSQRIEQARARCRQAILVANS 210

Query: 220 F 220
           F
Sbjct: 211 F 211

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297847470|ref|XP_002891616.1| hypothetical protein ARALYDRAFT_474225 [Arabidopsis lyrata subsp. lyrata] gi|297337458|gb|EFH67875.1| hypothetical protein ARALYDRAFT_474225 [Arabidopsis lyrata subsp. lyrata]

 Score =  249 bits (637), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 136/214 (63%), Positives = 163/214 (76%), Gaps = 10/214 (4%)

Query: 8   FLSQPNSPLFNHFTSKNQTSRNPSQRSYNSIKCSNTSNNSTPVPAQPEDESFP-SPYPNS 66
           FL Q  S    H T   +T     + +  S KCS     S P   +P+D+    +P P S
Sbjct: 7   FLLQSLSSTNLHITVPIRTYSFGLRTTKFSTKCS-----SKP---EPKDQFINLTPAPES 58

Query: 67  IATESSDTFPIEKRRKSEILRERRARTGLVKPEPPNFEVGWKRTKEISLEKPIGFVIMDF 126
           I T S++ FPIEKRR+SEI+R+R  R G+ K EPPNFE+GWKRTKEI+LEKP G+VIMDF
Sbjct: 59  INTTSAEKFPIEKRRRSEIIRDRTQR-GIEKQEPPNFEIGWKRTKEINLEKPKGYVIMDF 117

Query: 127 LEKLQGLMERDYGSTALLAKVGELVAERAREEAEVLRDEGKVEERMVTELSRVLRLMEMD 186
           LEK + LM R++GS  LLAK GE+VAERAREEAEVLRDEGKVEERMVTEL RVL+LMEMD
Sbjct: 118 LEKFEALMAREFGSKELLAKAGEIVAERAREEAEVLRDEGKVEERMVTELFRVLKLMEMD 177

Query: 187 MAMVKAAVKEETLSERLEQAKARCRQAILVANSF 220
           +AMVKA+VK+ETLS+R+EQA+ARCRQAILVANSF
Sbjct: 178 LAMVKASVKDETLSQRIEQARARCRQAILVANSF 211

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|302143217|emb|CBI20512.3| unnamed protein product [Vitis vinifera]

 Score =  244 bits (624), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 137/214 (64%), Positives = 164/214 (76%), Gaps = 14/214 (6%)

Query: 1   MAATFFPFLSQPNSPLFNHFTSKNQTSRNPSQRSYNSIKCSNTSN------NSTPVPAQP 54
           MA+TF  F++  N  L +H    NQ    PSQ S + ++  +  N      N T  P+ P
Sbjct: 1   MASTFLRFITHVNPLLLHH----NQ----PSQTSNSLLRIHHLPNPKPFTVNCTTPPSSP 52

Query: 55  EDESFPSPYPNSIATESSDTFPIEKRRKSEILRERRARTGLVKPEPPNFEVGWKRTKEIS 114
           +   FP+PYPNS  T + +TFPIEKRRKSEI+R+R+ART L KPEPPNFEVGWKR+K I 
Sbjct: 53  DPPDFPNPYPNSDTTNNVETFPIEKRRKSEIIRDRKARTKLEKPEPPNFEVGWKRSKVIE 112

Query: 115 LEKPIGFVIMDFLEKLQGLMERDYGSTALLAKVGELVAERAREEAEVLRDEGKVEERMVT 174
           LEKP G+VI DFLEKL+ LM R++GST LLAK GE+VAERAREEAEVLRDEG+V+ER+VT
Sbjct: 113 LEKPKGYVIADFLEKLEELMGREFGSTELLAKTGEIVAERAREEAEVLRDEGEVDERLVT 172

Query: 175 ELSRVLRLMEMDMAMVKAAVKEETLSERLEQAKA 208
           EL RVLRLMEMD+AMVKAAVKEETLSERL+QAKA
Sbjct: 173 ELFRVLRLMEMDLAMVKAAVKEETLSERLKQAKA 206

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	220
TAIR|locus:2026068	211	CRR41 "AT1G51100" [Arabidopsis	0.945	0.985	0.562	3e-53

TAIR|locus:2026068 CRR41 "AT1G51100" [Arabidopsis thaliana (taxid:3702)]

 Score = 551 (199.0 bits), Expect = 3.0e-53, P = 3.0e-53
 Identities = 121/215 (56%), Positives = 150/215 (69%)

Query:     9 LSQPNSPLFNHFTSKNQTSRNPSQRSYNSIKCSNTSNNSTPVPAQPED-ESFPS--PYPN 65
             ++  ++ L    +SKN     P +   NS     T+  ST   + PE  + F +  P P 
Sbjct:     1 MASTSTLLLPSLSSKNLHIAVPIRT--NSF-VRRTTKFSTKCSSNPESKDQFINLTPAPE 57

Query:    66 SIATESSDTFPIEKRRKSEILRERRARTGLVKPEPPNFEVGWKRTKEISLEKPIGFVIMD 125
             SI T S++ FPIEKRR+SEI+R+R  R G+ KPEPPNFE+GWKRTKEI+LEKP G+VIMD
Sbjct:    58 SINTTSAEKFPIEKRRRSEIIRDRTQR-GIEKPEPPNFEIGWKRTKEINLEKPKGYVIMD 116

Query:   126 FLEKLQGLMERDYGSTALLAKVGXXXXXXXXXXXXXXXDEGKVEERMVTELSRVLRLMEM 185
             FLEK + LM R++GS  LLAK G               DEGKVEERMVTEL RVL+LMEM
Sbjct:   117 FLEKFEALMAREFGSKELLAKAGEIVAERAREEAEVLRDEGKVEERMVTELFRVLKLMEM 176

Query:   186 DMAMVKAAVKEETLSERLEQAKARCRQAILVANSF 220
             D+AMVKA+VK+ETLS+R+EQA+ARCRQAILVANSF
Sbjct:   177 DLAMVKASVKDETLSQRIEQARARCRQAILVANSF 211


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.314   0.128   0.358    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      220       205   0.00096  111 3  11 23  0.39    33
                                                     31  0.47    35


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  572 (61 KB)
  Total size of DFA:  144 KB (2089 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  23.83u 0.12s 23.95t   Elapsed:  00:00:02
  Total cpu time:  23.83u 0.12s 23.95t   Elapsed:  00:00:02
  Start:  Sat May 11 04:51:30 2013   End:  Sat May 11 04:51:32 2013

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0009570 "chloroplast stroma" evidence=IDA

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00027416001 SubName- Full=Chromosome chr19 scaffold_4, whole genome shotgun sequence; (218 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

No hit with probability above 80.00

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00