Citrus Sinensis ID: 027840

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------22
Protein Sequence
MDHEDVPSAPSTPATPGTPGAPLFGGFRGDHRGTNGRKSLLKSCKCFSVEEWAIEDGRLPSVSCSLPPPPVSLARKVGAEFVGTLILIFAGTATAIVNQKTQGSETLIGLAGSTGLAVMVVILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFHPIMGGGVTVPSAGYGEAFALEFIISFNLMFVVTAVATDTRAVS
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccccccccccccccccccccHHHHcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHccccccccc
Secondary Structure Prediction (SSPRO)
cccccccccccccccccccccccccccccccccccccccccEEcccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHEcccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHEEEEEEEEEEEEEEHEccccccccc
Coil and Loop (DISEMBL)
mdhedvpsapstpatpgtpgaplfggfrgdhrgtngrKSLLksckcfsveewaiedgrlpsvscslppppvslarKVGAEFVGTLILIFAGTATAIVNQKTQGSETLIGLAGSTGLAVMVVILSTghisgahlnPAVTIAFAALkhfpwkhvpvyIGAQIMASLCAAFALKgifhpimgggvtvpsagygeAFALEFIISFNLMFVVTAVatdtravs
Flexible Loop (DISEMBL)
mdhedvpsapstpatpgtpgaPLFGGFRGDHRGTNGRKSLLKSCKCFSVEEWAIEDGRLPSVSCSLPPPPVSLARKVGAEFVGTLILIFAGTATAIVNQKTQGSETLIGLAGSTGLAVMVVILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFHPIMGGGVTVPSAGYGEAFALEFIISFNLMFVVTAVATDTRAVS
Low Complexity Region (SEG)
MDHEDVpsapstpatpgtpgapLFGGFRGDHRGTNGRKSLLKSCKCFSVEEWAIEDGRlpsvscslppppvslARKVGAEFVGTLILIFAGTATAIVNQKTQGSETLIGLAGSTGLAVMVVILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFHPIMGGGVTVPSAGYGEAFALEFIISFNLMFvvtavatdtravS
Disordered region (IsUnstruct)
**************************************SLLKSCKCFSVEEWAIEDGRLPSVSCSLPPPPVSLARKVGAEFVGTLILIFAGTATAIVNQKTQGSETLIGLAGSTGLAVMVVILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFHPIMGGGVTVPSAGYGEAFALEFIISFNLMFVVTAVAT******
Disordered Region (DISOPRED)
******************PGAPLFG*****************************************PPPPVSLARKVGAEFVGTLILIFAGTATAIVNQKTQGSETLIGLAGSTGLAVMVVILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFHPIMGGGVTVPSAGYGEAFALEFIISFNLMFVVTAVATDT****
Disordered Region (DISEMBL)
***************PGTPGAPLFGGFRGDHRGTNGRKSLLKSCKCFSVEEWAIEDGRLPSVSCSLPPPPVSLARKVGAEFVGTLILIFAGTATAIVNQKTQGSETLIGLAGSTGLAVMVVILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFHPIMGGGVTVPSAGYGEAFALEFIISFNLMFVVTAVATDTRAVS
Disordered Region (DISPRO)
*****************T**********G***********LKSCKCFSVE**********SVSCSLPPPPVSLARKVGAEFVGTLILIFAGTATAIVNQKTQGSETLIGLAGSTGLAVMVVILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFHPIMGGGVTVPSAGYGEAFALEFIISFNLMFVVTAVAT******
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiRRRRRRRRRRRRRRiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MDHEDVPSAPSTPATPGTPGAPLFGGFRGDHRGTNGRKSLLKSCKCFSVEEWAIEDGRLPSVSCSLPPPPVSLARKVGAEFVGTLILIFAGTATAIVNQKTQGSETLIGLAGSTGLAVMVVILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFHPIMGGGVTVPSAGYGEAFALEFIISFNLMFVVTAVATDTRAVS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	218	2.2.26 [Sep-21-2011]
Q9SAI4	305	Aquaporin NIP6-1 OS=Arabi	yes	no	0.995	0.711	0.824	1e-99
Q9SV84	304	Probable aquaporin NIP5-1	no	no	0.871	0.625	0.629	1e-61
Q9ATN1	302	Aquaporin NIP3-1 OS=Zea m	N/A	no	0.967	0.698	0.589	3e-58
Q0IWF3	311	Aquaporin NIP3-1 OS=Oryza	yes	no	0.922	0.646	0.584	2e-56
Q7EYH7	305	Aquaporin NIP3-2 OS=Oryza	no	no	0.688	0.491	0.533	1e-37
Q84S07	278	Aquaporin NIP3-3 OS=Oryza	no	no	0.688	0.539	0.52	3e-36
Q9ATN2	294	Aquaporin NIP2-2 OS=Zea m	N/A	no	0.678	0.503	0.459	8e-32
Q9AT74	301	Aquaporin NIP2-3 OS=Zea m	N/A	no	0.678	0.491	0.459	9e-32
Q19KC1	295	Aquaporin NIP2-1 OS=Zea m	N/A	no	0.678	0.501	0.459	2e-31
Q8W036	283	Probable aquaporin NIP4-2	no	no	0.733	0.565	0.469	2e-31

>sp|Q9SAI4|NIP61_ARATH Aquaporin NIP6-1 OS=Arabidopsis thaliana GN=NIP6-1 PE=1 SV=1

 Score =  362 bits (929), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 183/222 (82%), Positives = 196/222 (88%), Gaps = 5/222 (2%)

Query: 1   MDHEDVPSAPSTPAT-PGTPGAPLFGGFRGDHRGTNGR---KSLLKSCKCFSVE-EWAIE 55
           MDHE++PS PSTPAT PGTPGAPLFGGF G   G NGR   KSLLKSCKCFSV+ EWA+E
Sbjct: 1   MDHEEIPSTPSTPATTPGTPGAPLFGGFEGKRNGHNGRYTPKSLLKSCKCFSVDNEWALE 60

Query: 56  DGRLPSVSCSLPPPPVSLARKVGAEFVGTLILIFAGTATAIVNQKTQGSETLIGLAGSTG 115
           DGRLP V+CSLPPP VSL RK+GAEFVGTLILIFAGTATAIVNQKT G+ETLIG A S G
Sbjct: 61  DGRLPPVTCSLPPPNVSLYRKLGAEFVGTLILIFAGTATAIVNQKTDGAETLIGCAASAG 120

Query: 116 LAVMVVILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFH 175
           LAVM+VILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQ+MAS+ AAFALK +F 
Sbjct: 121 LAVMIVILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQVMASVSAAFALKAVFE 180

Query: 176 PIMGGGVTVPSAGYGEAFALEFIISFNLMFVVTAVATDTRAV 217
           P M GGVTVP+ G  +AFALEFIISFNLMFVVTAVATDTRAV
Sbjct: 181 PTMSGGVTVPTVGLSQAFALEFIISFNLMFVVTAVATDTRAV 222

Transports glycerol, urea and formamide, in Xenopus laevis oocytes. Very low water transport activity.
Arabidopsis thaliana (taxid: 3702)

>sp|Q9SV84|NIP51_ARATH Probable aquaporin NIP5-1 OS=Arabidopsis thaliana GN=NIP5-1 PE=2 SV=1

 Score =  236 bits (602), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 124/197 (62%), Positives = 142/197 (72%), Gaps = 7/197 (3%)

Query: 23  LFGGFRGDHRGTNGRKSLLKSCKCFSV--EEWAIEDGRLPSVSCSLPPPPVSLARKVGAE 80
           L  G R D    + RK   + CKC  V    W   D    +     P P VSL RK+GAE
Sbjct: 29  LITGMRVDSMSFDHRKPTPR-CKCLPVMGSTWGQHD----TCFTDFPSPDVSLTRKLGAE 83

Query: 81  FVGTLILIFAGTATAIVNQKTQGSETLIGLAGSTGLAVMVVILSTGHISGAHLNPAVTIA 140
           FVGT ILIF  TA  IVNQK  G+ETLIG A   GLAVM++ILSTGHISGAHLNP++TIA
Sbjct: 84  FVGTFILIFTATAGPIVNQKYDGAETLIGNAACAGLAVMIIILSTGHISGAHLNPSLTIA 143

Query: 141 FAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFHPIMGGGVTVPSAGYGEAFALEFIIS 200
           FAAL+HFPW HVP YI AQ+ AS+CA+FALKG+FHP M GGVT+PS   G+AFALEFII+
Sbjct: 144 FAALRHFPWAHVPAYIAAQVSASICASFALKGVFHPFMSGGVTIPSVSLGQAFALEFIIT 203

Query: 201 FNLMFVVTAVATDTRAV 217
           F L+FVVTAVATDTRAV
Sbjct: 204 FILLFVVTAVATDTRAV 220

Boric acid transporter. Low water transport activity. Plays an important role as plasma membrane boric acid channel for the boron uptake required for plant growth and development under boron limitation.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9ATN1|NIP31_MAIZE Aquaporin NIP3-1 OS=Zea mays GN=NIP3-1 PE=2 SV=1

 Score =  224 bits (571), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 132/224 (58%), Positives = 152/224 (67%), Gaps = 13/224 (5%)

Query: 1   MDHEDVPSAPSTPATPGTPGAPLF--GGFRGDHRGTNGRKSLLKSCKCF---SVEEWAIE 55
           M+    P   S PATPGTP APLF  GG R D      RKS+ + CKC    +VE W + 
Sbjct: 1   MEPGSTPPNGSAPATPGTP-APLFSSGGPRVDSLSYE-RKSMPR-CKCLPLPAVEGWGVA 57

Query: 56  DGRLPSVSCSLPPPPVSLARKVGAEFVGTLILIFAGTATAIVNQKTQGSETLIGLAGSTG 115
                +    +P P VSL RK+GAEFVGT ILIF  TA  IVNQK  G+ +  G A   G
Sbjct: 58  TH---TCVVEIPAPDVSLTRKLGAEFVGTFILIFFATAAPIVNQKYGGAISPFGNAACAG 114

Query: 116 LAVMVVILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFH 175
           LAV  VILSTGHISGAHLNP++TIAFAAL+HFPW  VP Y+  Q +AS+CAAFALKG+FH
Sbjct: 115 LAVATVILSTGHISGAHLNPSLTIAFAALRHFPWLQVPAYVAVQALASVCAAFALKGVFH 174

Query: 176 PIMGGGVTVPSA--GYGEAFALEFIISFNLMFVVTAVATDTRAV 217
           P + GGVTVP A     +AF  EFIISFNL+FVVTAVATDTRAV
Sbjct: 175 PFLSGGVTVPDATVSTAQAFFTEFIISFNLLFVVTAVATDTRAV 218

Aquaporins facilitate the transport of water and small neutral solutes across cell membranes.

Zea mays (taxid: 4577)

>sp|Q0IWF3|NIP31_ORYSJ Aquaporin NIP3-1 OS=Oryza sativa subsp. japonica GN=NIP3-1 PE=2 SV=2

 Score =  219 bits (557), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 124/212 (58%), Positives = 146/212 (68%), Gaps = 11/212 (5%)

Query: 11  STPATPGTPGAPLFGGFRGDHRGTNGRKSLLKSCKCFSVEEWAIEDGRLPSVS---CSLP 67
           S PATPGTP APLF G R D      RKS+ + CKC      A+ +   PS       +P
Sbjct: 22  SAPATPGTP-APLFAGPRVDSLSYE-RKSMPR-CKCLPA---AVAEAWAPSAHGCVVEIP 75

Query: 68  PPPVSLARKVGAEFVGTLILIFAGTATAIVNQKTQGSETLIGLAGSTGLAVMVVILSTGH 127
            P VSL RK+GAEFVGT ILIF  TA  IVNQK  G+ +  G A   GLAV  +ILSTGH
Sbjct: 76  APDVSLTRKLGAEFVGTFILIFFATAAPIVNQKYGGAISPFGNAACAGLAVTTIILSTGH 135

Query: 128 ISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFHPIMGGGVTV--P 185
           ISGAHLNP++TIAFAAL+HFPW  VP Y+  Q++ S+CA FALKG+FHP + GGVTV  P
Sbjct: 136 ISGAHLNPSLTIAFAALRHFPWLQVPAYVAVQVLGSICAGFALKGVFHPFLSGGVTVPDP 195

Query: 186 SAGYGEAFALEFIISFNLMFVVTAVATDTRAV 217
           +    +AF  EFII+FNL+FVVTAVATDTRAV
Sbjct: 196 TISTAQAFFTEFIITFNLLFVVTAVATDTRAV 227

Aquaporins facilitate the transport of water and small neutral solutes across cell membranes.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q7EYH7|NIP32_ORYSJ Aquaporin NIP3-2 OS=Oryza sativa subsp. japonica GN=NIP3-2 PE=2 SV=1

 Score =  155 bits (393), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 80/150 (53%), Positives = 107/150 (71%)

Query: 69  PPVSLARKVGAEFVGTLILIFAGTATAIVNQKTQGSETLIGLAGSTGLAVMVVILSTGHI 128
           PPV L +KVGAEF GT  LIF   +T I++++ +G E+L+G+A S GLAV V++LS  HI
Sbjct: 89  PPVPLVKKVGAEFFGTFTLIFTVLSTIIMDEQHKGVESLLGIATSAGLAVTVLVLSLIHI 148

Query: 129 SGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFHPIMGGGVTVPSAG 188
           SG HLNPAV+IA     H P  H+  YI AQI+ S+ A+FA+KG++HP+  G VTVP  G
Sbjct: 149 SGCHLNPAVSIAMTVFGHLPPAHLLPYIAAQILGSITASFAVKGMYHPVNPGIVTVPKVG 208

Query: 189 YGEAFALEFIISFNLMFVVTAVATDTRAVS 218
             EAF LEF+ +F L+F++TA+ATD  AV 
Sbjct: 209 TVEAFFLEFVTTFVLLFIITALATDPNAVK 238

Aquaporins facilitate the transport of water and small neutral solutes across cell membranes.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q84S07|NIP33_ORYSJ Aquaporin NIP3-3 OS=Oryza sativa subsp. japonica GN=NIP3-3 PE=2 SV=1

 Score =  151 bits (381), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 78/150 (52%), Positives = 108/150 (72%)

Query: 68  PPPVSLARKVGAEFVGTLILIFAGTATAIVNQKTQGSETLIGLAGSTGLAVMVVILSTGH 127
           P  V L +KV AEF GT ILIF   +T I++++ +  ETL+G+A S GLAV V++LS  H
Sbjct: 61  PSSVPLLKKVSAEFFGTFILIFTVLSTIIMDEQHKSIETLLGIATSAGLAVTVLVLSLIH 120

Query: 128 ISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFHPIMGGGVTVPSA 187
           ISG HLNPA++IA A   H P  H+  YI +QI+ ++ A+FA+KG++HP+  G VTVP+ 
Sbjct: 121 ISGCHLNPAISIAMAVFGHLPSAHLLPYISSQILGAVAASFAVKGLYHPVNPGIVTVPNV 180

Query: 188 GYGEAFALEFIISFNLMFVVTAVATDTRAV 217
           G  EAF +EFII+F L+F++TA+ATD  AV
Sbjct: 181 GTVEAFFVEFIITFFLLFIITALATDPNAV 210

Aquaporins facilitate the transport of water and small neutral solutes across cell membranes.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q9ATN2|NIP22_MAIZE Aquaporin NIP2-2 OS=Zea mays GN=NIP2-2 PE=2 SV=1

 Score =  137 bits (344), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 68/148 (45%), Positives = 94/148 (63%)

Query: 70  PVSLARKVGAEFVGTLILIFAGTATAIVNQKTQGSETLIGLAGSTGLAVMVVILSTGHIS 129
           P  L +KV +E V T +L+F     A +  +     + +G + + GL V V+I +TGHIS
Sbjct: 47  PPHLGKKVISEVVATFLLVFVTCGAASIYGEDNRRISQLGQSVAGGLIVTVMIYATGHIS 106

Query: 130 GAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFHPIMGGGVTVPSAGY 189
           GAH+NPAVT++FA  +HFPW  VP Y  AQ   ++CAAF LK + HPI   G T PS  +
Sbjct: 107 GAHMNPAVTLSFACFRHFPWIQVPFYWAAQFTGAMCAAFVLKAVLHPIAVIGTTTPSGPH 166

Query: 190 GEAFALEFIISFNLMFVVTAVATDTRAV 217
             A  +E +++FN+MFV  AVATD+RAV
Sbjct: 167 WHALLIEIVVTFNMMFVTCAVATDSRAV 194

Aquaporins facilitate the transport of water and small neutral solutes across cell membranes.

Zea mays (taxid: 4577)

>sp|Q9AT74|NIP23_MAIZE Aquaporin NIP2-3 OS=Zea mays GN=NIP2-3 PE=2 SV=1

 Score =  136 bits (343), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 68/148 (45%), Positives = 94/148 (63%)

Query: 70  PVSLARKVGAEFVGTLILIFAGTATAIVNQKTQGSETLIGLAGSTGLAVMVVILSTGHIS 129
           P  L +KV +E V T +L+F     A +  +     + +G + + GL V V+I +TGHIS
Sbjct: 50  PPHLGKKVISEVVATFLLVFVTCGAASIYGEDNARISQLGQSVAGGLIVTVMIYATGHIS 109

Query: 130 GAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFHPIMGGGVTVPSAGY 189
           GAH+NPAVT++FA  +HFPW  VP Y  AQ   ++CAAF LK +  PI   G T PS  +
Sbjct: 110 GAHMNPAVTLSFACFRHFPWIQVPFYWAAQFTGAMCAAFVLKAVLQPIAVIGTTTPSGPH 169

Query: 190 GEAFALEFIISFNLMFVVTAVATDTRAV 217
             A A+E +++FN+MFV  AVATD+RAV
Sbjct: 170 WHALAIEIVVTFNMMFVTCAVATDSRAV 197

Aquaporins facilitate the transport of water and small neutral solutes across cell membranes.

Zea mays (taxid: 4577)

>sp|Q19KC1|NIP21_MAIZE Aquaporin NIP2-1 OS=Zea mays GN=NIP2-1 PE=2 SV=2

 Score =  135 bits (341), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 68/148 (45%), Positives = 93/148 (62%)

Query: 70  PVSLARKVGAEFVGTLILIFAGTATAIVNQKTQGSETLIGLAGSTGLAVMVVILSTGHIS 129
           P  L +KV +E V T +L+F     A +    +   + +G + + GL V V+I + GHIS
Sbjct: 42  PPHLLKKVVSEVVSTFLLVFVTCGAAGIYGSDKDRISQLGQSVAGGLIVTVMIYAVGHIS 101

Query: 130 GAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFHPIMGGGVTVPSAGY 189
           GAH+NPAVT+AFA  +HFPW  VP Y  AQ   S+CA+F LK + HPI   G T P+  +
Sbjct: 102 GAHMNPAVTLAFAVFRHFPWIQVPFYWAAQFTGSICASFVLKAVLHPIAVLGTTTPTGPH 161

Query: 190 GEAFALEFIISFNLMFVVTAVATDTRAV 217
             +  +E I++FN+MFV  AVATDTRAV
Sbjct: 162 WHSLVIEIIVTFNMMFVTLAVATDTRAV 189

Aquaporins facilitate the transport of water and small neutral solutes across cell membranes.

Zea mays (taxid: 4577)

>sp|Q8W036|NIP42_ARATH Probable aquaporin NIP4-2 OS=Arabidopsis thaliana GN=NIP4-2 PE=2 SV=2

 Score =  135 bits (340), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 77/164 (46%), Positives = 102/164 (62%), Gaps = 4/164 (2%)

Query: 55  EDGRLPSVSCSLPPPPVSLARKVGAEFVGTLILIFAGTATAIVNQKTQGSETLIGLAGST 114
             G + +  CS  P  V L +K+ AE +GT  +IF+G    +VN    G+ T  G+  + 
Sbjct: 24  SQGGMETAICS-SPSIVCLTQKLIAEMIGTYFIIFSGCGVVVVNVLYGGTITFPGICVTW 82

Query: 115 GLAVMVVILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIF 174
           GL VMV+I STGHISGAH NPAVT+ FA  + FPW  VP+YIGAQ+  SL A+  L+ +F
Sbjct: 83  GLIVMVMIYSTGHISGAHFNPAVTVTFAVFRRFPWYQVPLYIGAQLTGSLLASLTLRLMF 142

Query: 175 H--PIMGGGVTVPSAGYGEAFALEFIISFNLMFVVTAVATDTRA 216
           +  P    G T P+   G+A   E IISF LMFV++ VATD+RA
Sbjct: 143 NVTPKAFFG-TTPTDSSGQALVAEIIISFLLMFVISGVATDSRA 185

Aquaporins facilitate the transport of water and small neutral solutes across cell membranes.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	218
224075688	303	aquaporin, MIP family, NIP subfamily [Po	0.990	0.712	0.870	1e-106
224053394	303	aquaporin, MIP family, NIP subfamily [Po	0.990	0.712	0.870	1e-105
394998161	300	aquaporin [Gossypium hirsutum] gi|394998	0.990	0.72	0.875	1e-105
300793633	280	TPA_inf: aquaporin NIP6;1 [Gossypium hir	0.990	0.771	0.875	1e-105
255572751	308	Aquaporin NIP1.1, putative [Ricinus comm	0.995	0.704	0.855	1e-104
404351589	304	plasma membrane aluminum transporter [Hy	0.990	0.710	0.853	1e-102
444300808	302	aquaporin protein 10 [Camellia sinensis]	0.986	0.711	0.843	1e-101
297839859	305	hypothetical protein ARALYDRAFT_477170 [	0.995	0.711	0.828	7e-99
297788574	242	predicted protein [Arabidopsis lyrata su	0.995	0.896	0.828	1e-98
292653557	234	aquaporin NIP6;6, partial [Gossypium hir	0.935	0.871	0.878	2e-98

>gi|224075688|ref|XP_002304723.1| aquaporin, MIP family, NIP subfamily [Populus trichocarpa] gi|222842155|gb|EEE79702.1| aquaporin, MIP family, NIP subfamily [Populus trichocarpa]

 Score =  391 bits (1004), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 189/217 (87%), Positives = 208/217 (95%), Gaps = 1/217 (0%)

Query: 1   MDHEDVPSAPSTPATPGTPGAPLFGGFRGDHRGTNGRKSLLKSCKCFSVEEWAIEDGRLP 60
           MD+ +VPS PSTPATPGTPGAPLFGGF+G+ RG +GRKSLL+SCKCFSVEEWA+E+GRLP
Sbjct: 1   MDNAEVPSVPSTPATPGTPGAPLFGGFKGE-RGVHGRKSLLRSCKCFSVEEWAMEEGRLP 59

Query: 61  SVSCSLPPPPVSLARKVGAEFVGTLILIFAGTATAIVNQKTQGSETLIGLAGSTGLAVMV 120
            VSCSLPPPPVSLARKVGAEF+GTLILIFAGTATAIVNQKTQGSETL+GLA S+GLAVM+
Sbjct: 60  PVSCSLPPPPVSLARKVGAEFIGTLILIFAGTATAIVNQKTQGSETLVGLAASSGLAVMI 119

Query: 121 VILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFHPIMGG 180
           VIL+TGHISGAHLNP++TIAFAALKHFPWKHVPVYIGAQ++ASLCAAFALKGIFHP+MGG
Sbjct: 120 VILATGHISGAHLNPSITIAFAALKHFPWKHVPVYIGAQVLASLCAAFALKGIFHPVMGG 179

Query: 181 GVTVPSAGYGEAFALEFIISFNLMFVVTAVATDTRAV 217
           GVTVPS GYG+AFALEFI SF LMFVVTAVATDTRAV
Sbjct: 180 GVTVPSGGYGQAFALEFITSFILMFVVTAVATDTRAV 216

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224053394|ref|XP_002297797.1| aquaporin, MIP family, NIP subfamily [Populus trichocarpa] gi|222845055|gb|EEE82602.1| aquaporin, MIP family, NIP subfamily [Populus trichocarpa]

 Score =  387 bits (995), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 189/217 (87%), Positives = 208/217 (95%), Gaps = 1/217 (0%)

Query: 1   MDHEDVPSAPSTPATPGTPGAPLFGGFRGDHRGTNGRKSLLKSCKCFSVEEWAIEDGRLP 60
           MD+E+VPSAPSTPATPGTPGAPLFGGF+G+ RG +G+KSLL+SCKCF VEEWA+E+GRLP
Sbjct: 1   MDNEEVPSAPSTPATPGTPGAPLFGGFKGE-RGVHGKKSLLRSCKCFGVEEWAMEEGRLP 59

Query: 61  SVSCSLPPPPVSLARKVGAEFVGTLILIFAGTATAIVNQKTQGSETLIGLAGSTGLAVMV 120
            VSCSLPPPPVSLARK+GAEF+GTLILIFAGTATAIVNQKTQGSETLIGLA STGLA M+
Sbjct: 60  PVSCSLPPPPVSLARKLGAEFMGTLILIFAGTATAIVNQKTQGSETLIGLAASTGLAAMI 119

Query: 121 VILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFHPIMGG 180
           VILSTGHISGAHLNP++TIAFAALKHFPWKHVPVYIGAQ++ASLCAAFALK IFHP+MGG
Sbjct: 120 VILSTGHISGAHLNPSITIAFAALKHFPWKHVPVYIGAQVLASLCAAFALKVIFHPMMGG 179

Query: 181 GVTVPSAGYGEAFALEFIISFNLMFVVTAVATDTRAV 217
           GVTVPS G+G+AFALEFIISF LMFVVTAVATDTRAV
Sbjct: 180 GVTVPSGGHGQAFALEFIISFILMFVVTAVATDTRAV 216

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|394998161|gb|AFN44229.1| aquaporin [Gossypium hirsutum] gi|394998163|gb|AFN44230.1| aquaporin [Gossypium hirsutum]

 Score =  385 bits (989), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 190/217 (87%), Positives = 205/217 (94%), Gaps = 1/217 (0%)

Query: 1   MDHEDVPSAPSTPATPGTPGAPLFGGFRGDHRGTNGRKSLLKSCKCFSVEEWAIEDGRLP 60
           M++EDVPSAPSTP TPGTPGAPLFGGF+GDHRG   +KSLLKSCKCFSVE+ ++E+GRLP
Sbjct: 1   MENEDVPSAPSTPVTPGTPGAPLFGGFKGDHRGGFNKKSLLKSCKCFSVED-SMEEGRLP 59

Query: 61  SVSCSLPPPPVSLARKVGAEFVGTLILIFAGTATAIVNQKTQGSETLIGLAGSTGLAVMV 120
            VSCSLPPPPVSL RKVGAEF+GT ILIFAGTATAIVNQKTQGSETLIGLA STGLAVM+
Sbjct: 60  PVSCSLPPPPVSLTRKVGAEFIGTFILIFAGTATAIVNQKTQGSETLIGLAASTGLAVMI 119

Query: 121 VILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFHPIMGG 180
           VILSTGHISGAHLNPAVTIAFAALKHFP KHVPVYIGAQ+MASLCAAF LKG+FHP+MGG
Sbjct: 120 VILSTGHISGAHLNPAVTIAFAALKHFPRKHVPVYIGAQVMASLCAAFGLKGVFHPMMGG 179

Query: 181 GVTVPSAGYGEAFALEFIISFNLMFVVTAVATDTRAV 217
           GVTVPS G+G+AFALEFIISFNLMFVVTAVATDTRAV
Sbjct: 180 GVTVPSGGFGQAFALEFIISFNLMFVVTAVATDTRAV 216

Source: Gossypium hirsutum

Species: Gossypium hirsutum

Genus: Gossypium

Family: Malvaceae

Order: Malvales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|300793633|tpg|DAA33875.1| TPA_inf: aquaporin NIP6;1 [Gossypium hirsutum]

 Score =  385 bits (988), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 190/217 (87%), Positives = 205/217 (94%), Gaps = 1/217 (0%)

Query: 1   MDHEDVPSAPSTPATPGTPGAPLFGGFRGDHRGTNGRKSLLKSCKCFSVEEWAIEDGRLP 60
           M++EDVPSAPSTP TPGTPGAPLFGGF+GDHRG   +KSLLKSCKCFSVE+ ++E+GRLP
Sbjct: 1   MENEDVPSAPSTPVTPGTPGAPLFGGFKGDHRGGFNKKSLLKSCKCFSVED-SMEEGRLP 59

Query: 61  SVSCSLPPPPVSLARKVGAEFVGTLILIFAGTATAIVNQKTQGSETLIGLAGSTGLAVMV 120
            VSCSLPPPPVSL RKVGAEF+GT ILIFAGTATAIVNQKTQGSETLIGLA STGLAVM+
Sbjct: 60  PVSCSLPPPPVSLTRKVGAEFIGTFILIFAGTATAIVNQKTQGSETLIGLAASTGLAVMI 119

Query: 121 VILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFHPIMGG 180
           VILSTGHISGAHLNPAVTIAFAALKHFP KHVPVYIGAQ+MASLCAAF LKG+FHP+MGG
Sbjct: 120 VILSTGHISGAHLNPAVTIAFAALKHFPRKHVPVYIGAQVMASLCAAFGLKGVFHPMMGG 179

Query: 181 GVTVPSAGYGEAFALEFIISFNLMFVVTAVATDTRAV 217
           GVTVPS G+G+AFALEFIISFNLMFVVTAVATDTRAV
Sbjct: 180 GVTVPSGGFGQAFALEFIISFNLMFVVTAVATDTRAV 216

Source: Gossypium hirsutum

Species: Gossypium hirsutum

Genus: Gossypium

Family: Malvaceae

Order: Malvales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255572751|ref|XP_002527308.1| Aquaporin NIP1.1, putative [Ricinus communis] gi|223533308|gb|EEF35060.1| Aquaporin NIP1.1, putative [Ricinus communis]

 Score =  383 bits (983), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 189/221 (85%), Positives = 205/221 (92%), Gaps = 4/221 (1%)

Query: 1   MDHEDVPSAPSTPATPGTPGAPLFGGFRGDHRGTNG----RKSLLKSCKCFSVEEWAIED 56
           MD+E+VPSAPSTPATPGTPGAPLFGGF+GD    NG    RKSLLKSCKCFSVEEW++E+
Sbjct: 1   MDNEEVPSAPSTPATPGTPGAPLFGGFKGDRGNGNGVGFGRKSLLKSCKCFSVEEWSLEE 60

Query: 57  GRLPSVSCSLPPPPVSLARKVGAEFVGTLILIFAGTATAIVNQKTQGSETLIGLAGSTGL 116
           GRLP VSCSL PPPVSLARKVGAEF+GTLIL+FAGTATAIVNQKTQG+ETLIGLA STGL
Sbjct: 61  GRLPPVSCSLLPPPVSLARKVGAEFIGTLILMFAGTATAIVNQKTQGTETLIGLAVSTGL 120

Query: 117 AVMVVILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFHP 176
           AVM+VILSTGHISGAHLNP++TIAFAAL+HFPWKHVPVYIGAQ+ AS+CAAFALK IFHP
Sbjct: 121 AVMIVILSTGHISGAHLNPSITIAFAALRHFPWKHVPVYIGAQVSASVCAAFALKVIFHP 180

Query: 177 IMGGGVTVPSAGYGEAFALEFIISFNLMFVVTAVATDTRAV 217
            M GGVTVPS GYG+AFALEFIISFNLMFVVTAVATDTRAV
Sbjct: 181 FMSGGVTVPSGGYGQAFALEFIISFNLMFVVTAVATDTRAV 221

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|404351589|dbj|BAM44346.1| plasma membrane aluminum transporter [Hydrangea macrophylla]

 Score =  375 bits (963), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 186/218 (85%), Positives = 201/218 (92%), Gaps = 2/218 (0%)

Query: 1   MDHEDVPSAPSTPATPGTPGAPLFGGFRGDHRGTNGRKSLLKSCKCFSVEEWAIEDGRLP 60
           MD EDVPSAPSTP TPGTPGAPLFGGF+ +  G N R+S+LKSCKCF VE WA+E+G LP
Sbjct: 1   MDSEDVPSAPSTPVTPGTPGAPLFGGFKPERSG-NARRSILKSCKCFGVESWAMEEGSLP 59

Query: 61  SVSCSLPPPPVSLARKVGAEFVGTLILIFAGTATAIVNQKTQGSETLIGLAGSTGLAVMV 120
            V+CSLPPPPVSLARKVGAEF+GTLILIFAGTAT IVNQKTQGSETL+GLA STGLAVM+
Sbjct: 60  PVTCSLPPPPVSLARKVGAEFIGTLILIFAGTATPIVNQKTQGSETLLGLAASTGLAVMI 119

Query: 121 VILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFHPIMGG 180
           VILSTGHISGAHLNP+VTIAFAALKHFPWKHVP+YIGAQ+MASLCAAFALKGIFHPI GG
Sbjct: 120 VILSTGHISGAHLNPSVTIAFAALKHFPWKHVPMYIGAQVMASLCAAFALKGIFHPIRGG 179

Query: 181 G-VTVPSAGYGEAFALEFIISFNLMFVVTAVATDTRAV 217
           G VTVPS  YG+AFALEFII+FNLMFVVTAVATDTRAV
Sbjct: 180 GEVTVPSVHYGQAFALEFIITFNLMFVVTAVATDTRAV 217

Source: Hydrangea macrophylla

Species: Hydrangea macrophylla

Genus: Hydrangea

Family: Hydrangeaceae

Order: Cornales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|444300808|gb|AGD98713.1| aquaporin protein 10 [Camellia sinensis]

 Score =  372 bits (954), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 183/217 (84%), Positives = 199/217 (91%), Gaps = 2/217 (0%)

Query: 1   MDHEDVPSAPSTPATPGTPGAPLFGGFRGDHRGTNGRKSLLKSCKCFSVEEWAIEDGRLP 60
           M+ E+V SAPSTP TPGTPGAPLFGGFR +  G   R SLLKSCKCFSVE W +E+G LP
Sbjct: 1   MESEEVASAPSTPMTPGTPGAPLFGGFRPERNGR--RPSLLKSCKCFSVEAWTLEEGTLP 58

Query: 61  SVSCSLPPPPVSLARKVGAEFVGTLILIFAGTATAIVNQKTQGSETLIGLAGSTGLAVMV 120
           S+SCSLPPPPVSLARKVGAEF+GT ILIFAGTATAIVNQKTQG+ETLIGLA STGLAVM+
Sbjct: 59  SLSCSLPPPPVSLARKVGAEFIGTFILIFAGTATAIVNQKTQGTETLIGLAASTGLAVMI 118

Query: 121 VILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFHPIMGG 180
           VILSTGHISGAHLNPAVTIAFAALKHFPWKHVP+Y+GAQ++ASLCAAFALKG+FHP+MGG
Sbjct: 119 VILSTGHISGAHLNPAVTIAFAALKHFPWKHVPMYMGAQVIASLCAAFALKGVFHPLMGG 178

Query: 181 GVTVPSAGYGEAFALEFIISFNLMFVVTAVATDTRAV 217
           GVTVPS  Y +AFALEFIISFNLMFVVTAVATDTRAV
Sbjct: 179 GVTVPSGDYVQAFALEFIISFNLMFVVTAVATDTRAV 215

Source: Camellia sinensis

Species: Camellia sinensis

Genus: Camellia

Family: Theaceae

Order: Ericales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297839859|ref|XP_002887811.1| hypothetical protein ARALYDRAFT_477170 [Arabidopsis lyrata subsp. lyrata] gi|297333652|gb|EFH64070.1| hypothetical protein ARALYDRAFT_477170 [Arabidopsis lyrata subsp. lyrata]

 Score =  365 bits (937), Expect = 7e-99,   Method: Compositional matrix adjust.
 Identities = 184/222 (82%), Positives = 197/222 (88%), Gaps = 5/222 (2%)

Query: 1   MDHEDVPSAPSTPAT-PGTPGAPLFGGFRGDHRGTNGR---KSLLKSCKCFSVE-EWAIE 55
           MDHE++PS PSTPAT PGTPGAPLFGGF G   G NG+   KSLLKSCKCFSV+ EWA+E
Sbjct: 1   MDHEEIPSMPSTPATTPGTPGAPLFGGFEGKRNGHNGKYTPKSLLKSCKCFSVDNEWALE 60

Query: 56  DGRLPSVSCSLPPPPVSLARKVGAEFVGTLILIFAGTATAIVNQKTQGSETLIGLAGSTG 115
           DGRLP VSCSLPPP VSL RK+GAEFVGTLILIFAGTATAIVNQKT G+ETLIG A S G
Sbjct: 61  DGRLPPVSCSLPPPNVSLYRKLGAEFVGTLILIFAGTATAIVNQKTDGAETLIGCAASAG 120

Query: 116 LAVMVVILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFH 175
           LAVM+VILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQ+MAS+CAAFALK +F 
Sbjct: 121 LAVMIVILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQVMASVCAAFALKAVFE 180

Query: 176 PIMGGGVTVPSAGYGEAFALEFIISFNLMFVVTAVATDTRAV 217
           P M GGVTVP+ G  +AFALEFIISFNLMFVVTAVATDTRAV
Sbjct: 181 PTMSGGVTVPTVGLSQAFALEFIISFNLMFVVTAVATDTRAV 222

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297788574|ref|XP_002862367.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297307809|gb|EFH38625.1| predicted protein [Arabidopsis lyrata subsp. lyrata]

 Score =  364 bits (934), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 184/222 (82%), Positives = 197/222 (88%), Gaps = 5/222 (2%)

Query: 1   MDHEDVPSAPSTPAT-PGTPGAPLFGGFRGDHRGTNGR---KSLLKSCKCFSVE-EWAIE 55
           MDHE++PS PSTPAT PGTPGAPLFGGF G   G NG+   KSLLKSCKCFSV+ EWA+E
Sbjct: 1   MDHEEIPSMPSTPATTPGTPGAPLFGGFEGKRNGHNGKYTPKSLLKSCKCFSVDNEWALE 60

Query: 56  DGRLPSVSCSLPPPPVSLARKVGAEFVGTLILIFAGTATAIVNQKTQGSETLIGLAGSTG 115
           DGRLP VSCSLPPP VSL RK+GAEFVGTLILIFAGTATAIVNQKT G+ETLIG A S G
Sbjct: 61  DGRLPPVSCSLPPPNVSLYRKLGAEFVGTLILIFAGTATAIVNQKTDGAETLIGCAASAG 120

Query: 116 LAVMVVILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFH 175
           LAVM+VILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQ+MAS+CAAFALK +F 
Sbjct: 121 LAVMIVILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQVMASVCAAFALKAVFE 180

Query: 176 PIMGGGVTVPSAGYGEAFALEFIISFNLMFVVTAVATDTRAV 217
           P M GGVTVP+ G  +AFALEFIISFNLMFVVTAVATDTRAV
Sbjct: 181 PTMSGGVTVPTVGLSQAFALEFIISFNLMFVVTAVATDTRAV 222

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|292653557|gb|ADE34295.1| aquaporin NIP6;6, partial [Gossypium hirsutum]

 Score =  364 bits (934), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 180/205 (87%), Positives = 193/205 (94%), Gaps = 1/205 (0%)

Query: 13  PATPGTPGAPLFGGFRGDHRGTNGRKSLLKSCKCFSVEEWAIEDGRLPSVSCSLPPPPVS 72
           P TPGTPGAPLFGGF+GDHRG   +KSLLKSCKCFSVE+ ++E+GRLP VSCSLPPPPVS
Sbjct: 1   PVTPGTPGAPLFGGFKGDHRGGFNKKSLLKSCKCFSVED-SMEEGRLPPVSCSLPPPPVS 59

Query: 73  LARKVGAEFVGTLILIFAGTATAIVNQKTQGSETLIGLAGSTGLAVMVVILSTGHISGAH 132
           L RKVGAEF+GT ILIFAGTATAIVNQKTQGSETLIGLA STGLAVM+VILSTGHISGAH
Sbjct: 60  LTRKVGAEFIGTFILIFAGTATAIVNQKTQGSETLIGLAASTGLAVMIVILSTGHISGAH 119

Query: 133 LNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFHPIMGGGVTVPSAGYGEA 192
           LNPAVTIAFAALKHFP KHVPVYIGAQ+MASLCAAF LKG+FHP+MGGGVTVPS G+G+A
Sbjct: 120 LNPAVTIAFAALKHFPRKHVPVYIGAQVMASLCAAFGLKGVFHPMMGGGVTVPSGGFGQA 179

Query: 193 FALEFIISFNLMFVVTAVATDTRAV 217
           FALEFIISFNLMFVVTAVATDTRAV
Sbjct: 180 FALEFIISFNLMFVVTAVATDTRAV 204

Source: Gossypium hirsutum

Species: Gossypium hirsutum

Genus: Gossypium

Family: Malvaceae

Order: Malvales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	218
TAIR|locus:2025822	305	NIP6;1 "NOD26-like intrinsic p	0.940	0.672	0.685	8e-69
TAIR|locus:2122829	304	NIP5;1 "NOD26-like intrinsic p	0.816	0.585	0.578	7.4e-50
TAIR|locus:2156025	283	NIP4;2 "NOD26-like intrinsic p	0.596	0.459	0.481	4e-26
TAIR|locus:2117119	296	NLM1 "NOD26-like major intrins	0.600	0.442	0.460	2.9e-25
UNIPROTKB|Q6Z2T3	298	NIP2-1 "Aquaporin NIP2-1" [Ory	0.600	0.439	0.412	7.6e-25
TAIR|locus:2156020	283	NIP4;1 "NOD26-like intrinsic p	0.596	0.459	0.466	1.2e-24
TAIR|locus:2826185	323	NIP3;1 "NOD26-like intrinsic p	0.596	0.402	0.478	3.3e-24
TAIR|locus:2117184	294	NIP1;2 "NOD26-like intrinsic p	0.591	0.438	0.460	1.1e-23
TAIR|locus:2082385	275	NIP7;1 "NOD26-like intrinsic p	0.587	0.465	0.410	2.2e-18
TAIR|locus:2040904	288	NIP2;1 "NOD26-like intrinsic p	0.582	0.440	0.4	5.8e-18

TAIR|locus:2025822 NIP6;1 "NOD26-like intrinsic protein 6;1" [Arabidopsis thaliana (taxid:3702)]

 Score = 698 (250.8 bits), Expect = 8.0e-69, P = 8.0e-69
 Identities = 144/210 (68%), Positives = 156/210 (74%)

Query:     1 MDHEDVXXXXXXXXXXXXXXXX-LFGGFRGDHRGTNGR---KSLLKSCKCFSVE-EWAIE 55
             MDHE++                 LFGGF G   G NGR   KSLLKSCKCFSV+ EWA+E
Sbjct:     1 MDHEEIPSTPSTPATTPGTPGAPLFGGFEGKRNGHNGRYTPKSLLKSCKCFSVDNEWALE 60

Query:    56 DGRXXXXXXXXXXXXXXXARKVGAEFVGTLILIFAGTATAIVNQKTQGSETLIGLAGSTG 115
             DGR                RK+GAEFVGTLILIFAGTATAIVNQKT G+ETLIG A S G
Sbjct:    61 DGRLPPVTCSLPPPNVSLYRKLGAEFVGTLILIFAGTATAIVNQKTDGAETLIGCAASAG 120

Query:   116 LAVMVVILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFH 175
             LAVM+VILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQ+MAS+ AAFALK +F 
Sbjct:   121 LAVMIVILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQVMASVSAAFALKAVFE 180

Query:   176 PIMGGGVTVPSAGYGEAFALEFIISFNLMF 205
             P M GGVTVP+ G  +AFALEFIISFNLMF
Sbjct:   181 PTMSGGVTVPTVGLSQAFALEFIISFNLMF 210

GO:0005215 "transporter activity" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006810 "transport" evidence=IEA;ISS

GO:0015250 "water channel activity" evidence=ISS

GO:0016020 "membrane" evidence=IEA;ISS

GO:0015168 "glycerol transmembrane transporter activity" evidence=IDA

GO:0015204 "urea transmembrane transporter activity" evidence=IDA

GO:0005372 "water transmembrane transporter activity" evidence=IDA

GO:0046713 "borate transport" evidence=IMP

GO:0046715 "borate transmembrane transporter activity" evidence=IDA

GO:0080029 "cellular response to boron-containing substance levels" evidence=IEP

GO:0010264 "myo-inositol hexakisphosphate biosynthetic process" evidence=RCA

TAIR|locus:2122829 NIP5;1 "NOD26-like intrinsic protein 5;1" [Arabidopsis thaliana (taxid:3702)]

 Score = 519 (187.8 bits), Expect = 7.4e-50, P = 7.4e-50
 Identities = 107/185 (57%), Positives = 125/185 (67%)

Query:    23 LFGGFRGDHRGTNGRKSLLKSCKCFSV--EEWAIEDGRXXXXXXXXXXXXXXXARKVGAE 80
             L  G R D    + RK   + CKC  V    W    G+                RK+GAE
Sbjct:    29 LITGMRVDSMSFDHRKPTPR-CKCLPVMGSTW----GQHDTCFTDFPSPDVSLTRKLGAE 83

Query:    81 FVGTLILIFAGTATAIVNQKTQGSETLIGLAGSTGLAVMVVILSTGHISGAHLNPAVTIA 140
             FVGT ILIF  TA  IVNQK  G+ETLIG A   GLAVM++ILSTGHISGAHLNP++TIA
Sbjct:    84 FVGTFILIFTATAGPIVNQKYDGAETLIGNAACAGLAVMIIILSTGHISGAHLNPSLTIA 143

Query:   141 FAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFHPIMGGGVTVPSAGYGEAFALEFIIS 200
             FAAL+HFPW HVP YI AQ+ AS+CA+FALKG+FHP M GGVT+PS   G+AFALEFII+
Sbjct:   144 FAALRHFPWAHVPAYIAAQVSASICASFALKGVFHPFMSGGVTIPSVSLGQAFALEFIIT 203

Query:   201 FNLMF 205
             F L+F
Sbjct:   204 FILLF 208

GO:0005215 "transporter activity" evidence=IEA

GO:0006810 "transport" evidence=IEA;ISS

GO:0015250 "water channel activity" evidence=ISS;IDA

GO:0016020 "membrane" evidence=ISS

GO:0005886 "plasma membrane" evidence=IDA

GO:0010036 "response to boron-containing substance" evidence=IEP;IMP

GO:0046713 "borate transport" evidence=IDA

GO:0046715 "borate transmembrane transporter activity" evidence=IDA

GO:0080138 "borate uptake transmembrane transporter activity" evidence=IDA

GO:0080029 "cellular response to boron-containing substance levels" evidence=IEP

GO:0015105 "arsenite transmembrane transporter activity" evidence=IDA

GO:0015700 "arsenite transport" evidence=IDA

GO:0046685 "response to arsenic-containing substance" evidence=RCA;IMP

GO:0016328 "lateral plasma membrane" evidence=IDA

GO:0000041 "transition metal ion transport" evidence=RCA

GO:0006826 "iron ion transport" evidence=RCA

GO:0010106 "cellular response to iron ion starvation" evidence=RCA

GO:0010167 "response to nitrate" evidence=RCA

GO:0015706 "nitrate transport" evidence=RCA

TAIR|locus:2156025 NIP4;2 "NOD26-like intrinsic protein 4;2" [Arabidopsis thaliana (taxid:3702)]

 Score = 295 (108.9 bits), Expect = 4.0e-26, P = 4.0e-26
 Identities = 64/133 (48%), Positives = 84/133 (63%)

Query:    75 RKVGAEFVGTLILIFAGTATAIVNQKTQGSETLIGLAGSTGLAVMVVILSTGHISGAHLN 134
             +K+ AE +GT  +IF+G    +VN    G+ T  G+  + GL VMV+I STGHISGAH N
Sbjct:    43 QKLIAEMIGTYFIIFSGCGVVVVNVLYGGTITFPGICVTWGLIVMVMIYSTGHISGAHFN 102

Query:   135 PAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFH--PIMGGGVTVPSAGYGEA 192
             PAVT+ FA  + FPW  VP+YIGAQ+  SL A+  L+ +F+  P    G T P+   G+A
Sbjct:   103 PAVTVTFAVFRRFPWYQVPLYIGAQLTGSLLASLTLRLMFNVTPKAFFGTT-PTDSSGQA 161

Query:   193 FALEFIISFNLMF 205
                E IISF LMF
Sbjct:   162 LVAEIIISFLLMF 174

GO:0005215 "transporter activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0006810 "transport" evidence=IEA;ISS

GO:0006833 "water transport" evidence=IEA

GO:0015250 "water channel activity" evidence=ISS

GO:0016020 "membrane" evidence=IEA;ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

TAIR|locus:2117119 NLM1 "NOD26-like major intrinsic protein 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 287 (106.1 bits), Expect = 2.9e-25, P = 2.9e-25
 Identities = 64/139 (46%), Positives = 89/139 (64%)

Query:    75 RKVGAEFVGTLILIFAGTATAIVNQKTQGSETLIGLAGSTGLAVMVVILSTGHISGAHLN 134
             +K+ AEF+GT  L+F G A+ +VN +     TL G+A   GL +MV+I S GHISGAH+N
Sbjct:    55 QKLIAEFLGTYFLVFTGCASVVVNMQNDNVVTLPGIAIVWGLTIMVLIYSLGHISGAHIN 114

Query:   135 PAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALK---GIFHPIMGG--GVTVPSAGY 189
             PAVTIAFA+   FP K VP Y+ +Q++ S  AA  L+   G+ H +  G   V + S+  
Sbjct:   115 PAVTIAFASCGRFPLKQVPAYVISQVIGSTLAAATLRLLFGLDHDVCSGKHDVFIGSSPV 174

Query:   190 G---EAFALEFIISFNLMF 205
             G   +AF +EFI++F LMF
Sbjct:   175 GSDLQAFTMEFIVTFYLMF 193

GO:0005215 "transporter activity" evidence=IEA

GO:0006810 "transport" evidence=IEA;ISS

GO:0006833 "water transport" evidence=IEA

GO:0015250 "water channel activity" evidence=ISS;IDA

GO:0016020 "membrane" evidence=IEA;ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

GO:0015105 "arsenite transmembrane transporter activity" evidence=IDA

GO:0015700 "arsenite transport" evidence=IDA

GO:0046685 "response to arsenic-containing substance" evidence=RCA;IMP

GO:0031347 "regulation of defense response" evidence=IMP

GO:0005515 "protein binding" evidence=IPI

UNIPROTKB|Q6Z2T3 NIP2-1 "Aquaporin NIP2-1" [Oryza sativa Japonica Group (taxid:39947)]

 Score = 283 (104.7 bits), Expect = 7.6e-25, P = 7.6e-25
 Identities = 54/131 (41%), Positives = 80/131 (61%)

Query:    75 RKVGAEFVGTLILIFAGTATAIVNQKTQGSETLIGLAGSTGLAVMVVILSTGHISGAHLN 134
             +KV +E V T +L+F     A ++       + +G + + GL V V+I + GHISGAH+N
Sbjct:    49 KKVVSEVVATFLLVFMTCGAAGISGSDLSRISQLGQSIAGGLIVTVMIYAVGHISGAHMN 108

Query:   135 PAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFHPIMGGGVTVPSAGYGEAFA 194
             PAVT+AFA  +HFPW  VP Y  AQ   ++CA+F LK + HP+   G T P   +  +  
Sbjct:   109 PAVTLAFAVFRHFPWIQVPFYWAAQFTGAICASFVLKAVIHPVDVIGTTTPVGPHWHSLV 168

Query:   195 LEFIISFNLMF 205
             +E I++FN+MF
Sbjct:   169 VEVIVTFNMMF 179

GO:0005215 "transporter activity" evidence=ISS

GO:0015115 "silicate transmembrane transporter activity" evidence=IDA

GO:0015708 "silicate transport" evidence=IMP

GO:0016020 "membrane" evidence=IDA

GO:0048226 "Casparian strip" evidence=IDA

TAIR|locus:2156020 NIP4;1 "NOD26-like intrinsic protein 4;1" [Arabidopsis thaliana (taxid:3702)]

 Score = 281 (104.0 bits), Expect = 1.2e-24, P = 1.2e-24
 Identities = 62/133 (46%), Positives = 80/133 (60%)

Query:    75 RKVGAEFVGTLILIFAGTATAIVNQKTQGSETLIGLAGSTGLAVMVVILSTGHISGAHLN 134
             +K+ AE +GT  ++F+G    +VN    G+ T  G+  + GL VMV+I STGHISGAH N
Sbjct:    43 QKLIAEMIGTYFIVFSGCGVVVVNVLYGGTITFPGICVTWGLIVMVMIYSTGHISGAHFN 102

Query:   135 PAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFH--PIMGGGVTVPSAGYGEA 192
             PAVT+ FA  + FPW  VP+YIGAQ   SL A+  L+ +F   P    G T P+     A
Sbjct:   103 PAVTVTFAIFRRFPWHQVPLYIGAQFAGSLLASLTLRLMFKVTPEAFFGTT-PADSPARA 161

Query:   193 FALEFIISFNLMF 205
                E IISF LMF
Sbjct:   162 LVAEIIISFLLMF 174

GO:0005215 "transporter activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0006810 "transport" evidence=IEA;ISS

GO:0006833 "water transport" evidence=IEA

GO:0015250 "water channel activity" evidence=ISS

GO:0016020 "membrane" evidence=IEA;ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

TAIR|locus:2826185 NIP3;1 "NOD26-like intrinsic protein 3;1" [Arabidopsis thaliana (taxid:3702)]

 Score = 277 (102.6 bits), Expect = 3.3e-24, P = 3.3e-24
 Identities = 67/140 (47%), Positives = 87/140 (62%)

Query:    75 RKVGAEFVGTLILIFAGTATAIVNQKTQGSE-TLIGLAGSTGLAVMVVILSTGHISGAHL 133
             +K+  EFVGT  +IFAG +  +VN+ T G   TL G+A   GL V V+I S GH+SGAH 
Sbjct:    43 QKLIGEFVGTFTMIFAGCSAIVVNE-TYGKPVTLPGIALVWGLVVTVMIYSIGHVSGAHF 101

Query:   134 NPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFHP-----IMGGGV---TVP 185
             NPAV+IAFA+ K FP+  VP YI AQ++ S  AA  L+ +FH       + G V   T P
Sbjct:   102 NPAVSIAFASSKKFPFNQVPGYIAAQLLGSTLAAAVLRLVFHLDDDVCSLKGDVYVGTYP 161

Query:   186 SAGYGEAFALEFIISFNLMF 205
             S     +F +EFI +FNLMF
Sbjct:   162 SNSNTTSFVMEFIATFNLMF 181

GO:0005215 "transporter activity" evidence=IEA

GO:0006810 "transport" evidence=IEA;ISS

GO:0006833 "water transport" evidence=IEA

GO:0016020 "membrane" evidence=IEA;ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

TAIR|locus:2117184 NIP1;2 "NOD26-like intrinsic protein 1;2" [Arabidopsis thaliana (taxid:3702)]

 Score = 272 (100.8 bits), Expect = 1.1e-23, P = 1.1e-23
 Identities = 65/141 (46%), Positives = 86/141 (60%)

Query:    75 RKVGAEFVGTLILIFAGTATAIVNQKTQGSETLIGLAGSTGLAVMVVILSTGHISGAHLN 134
             +K+ AE +GT  LIFAG A   VN +   + TL G+A   GL VMV++ S GHISGAH N
Sbjct:    52 QKLMAEVLGTYFLIFAGCAAVAVNTQHDKAVTLPGIAIVWGLTVMVLVYSLGHISGAHFN 111

Query:   135 PAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIF----------HPIMGGGVTV 184
             PAVTIAFA+   FP K VP Y+ +Q++ S  AA  L+ +F          H +  G  T+
Sbjct:   112 PAVTIAFASCGRFPLKQVPAYVISQVIGSTLAAATLRLLFGLDQDVCSGKHDVFVG--TL 169

Query:   185 PSAGYGEAFALEFIISFNLMF 205
             PS    ++F +EFII+F LMF
Sbjct:   170 PSGSNLQSFVIEFIITFYLMF 190

GO:0005215 "transporter activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0006810 "transport" evidence=IEA;ISS

GO:0006833 "water transport" evidence=IEA

GO:0015250 "water channel activity" evidence=ISS

GO:0016020 "membrane" evidence=IEA;ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

GO:0080170 "hydrogen peroxide transmembrane transport" evidence=IDA

GO:0015105 "arsenite transmembrane transporter activity" evidence=IDA

GO:0015700 "arsenite transport" evidence=IDA

GO:0046685 "response to arsenic-containing substance" evidence=RCA;IMP

GO:0006857 "oligopeptide transport" evidence=RCA

TAIR|locus:2082385 NIP7;1 "NOD26-like intrinsic protein 7;1" [Arabidopsis thaliana (taxid:3702)]

 Score = 222 (83.2 bits), Expect = 2.2e-18, P = 2.2e-18
 Identities = 55/134 (41%), Positives = 76/134 (56%)

Query:    75 RKVGAEFVGTLILIFAGTATAIVNQKTQGSETLIGLAGSTGLAVMVVILSTGHISGAHLN 134
             R V AE VGT IL+F+        Q + G   L+  A + GL+V+VV+ S GHISGAHLN
Sbjct:    46 RIVMAELVGTFILMFSVCGVISSTQLSGGHVGLLEYAVTAGLSVVVVVYSIGHISGAHLN 105

Query:   135 PAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAF---ALKGIFHPIMGGGVTVPSAGYGE 191
             P++TIAFA    FPW  VP+YI AQ + +  A     ++ G+   IM    T P+     
Sbjct:   106 PSITIAFAVFGGFPWSQVPLYITAQTLGATAATLVGVSVYGVNADIMA---TKPALSCVS 162

Query:   192 AFALEFIISFNLMF 205
             AF +E I +  ++F
Sbjct:   163 AFFVELIATSIVVF 176

GO:0005215 "transporter activity" evidence=IEA

GO:0006810 "transport" evidence=IEA;ISS

GO:0015250 "water channel activity" evidence=ISS

GO:0016020 "membrane" evidence=IEA;ISS

GO:0035445 "borate transmembrane transport" evidence=IDA

GO:0046715 "borate transmembrane transporter activity" evidence=IDA

GO:0006863 "purine nucleobase transport" evidence=RCA

TAIR|locus:2040904 NIP2;1 "NOD26-like intrinsic protein 2;1" [Arabidopsis thaliana (taxid:3702)]

 Score = 218 (81.8 bits), Expect = 5.8e-18, P = 5.8e-18
 Identities = 56/140 (40%), Positives = 79/140 (56%)

Query:    75 RKVGAEFVGTLILIFAGTATAIVNQKTQGSETLIGLAGSTGLAVMVVILSTGHISGAHLN 134
             +K+ AE VGT  LIFAG A   VN +     TL+G+A   G+ +MV++   GH+S AH N
Sbjct:    48 QKLLAELVGTYYLIFAGCAAIAVNAQHNHVVTLVGIAVVWGIVIMVLVYCLGHLS-AHFN 106

Query:   135 PAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIF----------HPIMGGGVTV 184
             PAVT+A A+ + FP   VP YI  Q++ S  A+  L+ +F          H +  G  + 
Sbjct:   107 PAVTLALASSQRFPLNQVPAYITVQVIGSTLASATLRLLFDLNNDVCSKKHDVFLG--SS 164

Query:   185 PSAGYGEAFALEFIISFNLM 204
             PS    +AF +EFII+  LM
Sbjct:   165 PSGSDLQAFVMEFIITGFLM 184

GO:0005215 "transporter activity" evidence=IEA

GO:0006810 "transport" evidence=IEA;ISS

GO:0006833 "water transport" evidence=IEA

GO:0015250 "water channel activity" evidence=ISS

GO:0016020 "membrane" evidence=IEA;ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0001666 "response to hypoxia" evidence=IEP

GO:0005886 "plasma membrane" evidence=IDA

GO:0015129 "lactate transmembrane transporter activity" evidence=IDA

GO:0015727 "lactate transport" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9SAI4	NIP61_ARATH	No assigned EC number	0.8243	0.9954	0.7114	yes	no
Q0IWF3	NIP31_ORYSJ	No assigned EC number	0.5849	0.9220	0.6463	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	218
PLN00026	298	PLN00026, PLN00026, aquaporin NIP; Provisional	1e-126
PLN00182	283	PLN00182, PLN00182, putative aquaporin NIP4; Provi	5e-40
PLN00184	296	PLN00184, PLN00184, aquaporin NIP1; Provisional	3e-36
cd00333	228	cd00333, MIP, Major intrinsic protein (MIP) superf	1e-34
PLN00183	274	PLN00183, PLN00183, putative aquaporin NIP7; Provi	1e-31
pfam00230	218	pfam00230, MIP, Major intrinsic protein	4e-31
TIGR00861	216	TIGR00861, MIP, MIP family channel proteins	2e-30
COG0580	241	COG0580, GlpF, Glycerol uptake facilitator and rel	3e-29
PTZ00016	294	PTZ00016, PTZ00016, aquaglyceroporin; Provisional	3e-19
PRK05420	231	PRK05420, PRK05420, aquaporin Z; Provisional	4e-17
PLN00027	252	PLN00027, PLN00027, aquaporin TIP; Provisional	6e-10
PLN00166	250	PLN00166, PLN00166, aquaporin TIP2; Provisional	2e-08
cd00333	228	cd00333, MIP, Major intrinsic protein (MIP) superf	8e-07
PLN00167	256	PLN00167, PLN00167, aquaporin TIP5; Provisional	3e-05
COG0580	241	COG0580, GlpF, Glycerol uptake facilitator and rel	1e-04
PLN00026	298	PLN00026, PLN00026, aquaporin NIP; Provisional	4e-04
PLN00182	283	PLN00182, PLN00182, putative aquaporin NIP4; Provi	4e-04
pfam00230	218	pfam00230, MIP, Major intrinsic protein	5e-04
TIGR00861	216	TIGR00861, MIP, MIP family channel proteins	0.002

>gnl|CDD|177663 PLN00026, PLN00026, aquaporin NIP; Provisional

 Score =  358 bits (919), Expect = e-126
 Identities = 162/217 (74%), Positives = 181/217 (83%), Gaps = 3/217 (1%)

Query: 1   MDHEDVPSAPSTPATPGTPGAPLFGGFRGDHRGTNGRKSLLKSCKCFSVEEWAIEDGRLP 60
           MD+E+VPSAPSTPATPGTPG PLFGGFR D   + G + LL SCKCF VE  A+E GRLP
Sbjct: 1   MDNEEVPSAPSTPATPGTPGGPLFGGFRVD-SLSYGDRKLLPSCKCFPVE--ALEWGRLP 57

Query: 61  SVSCSLPPPPVSLARKVGAEFVGTLILIFAGTATAIVNQKTQGSETLIGLAGSTGLAVMV 120
           +  C LPPP VSL RK+GAEFVGT ILIFA TA  IVNQK  G+ETLIG A   GLAVM+
Sbjct: 58  TCFCDLPPPDVSLTRKLGAEFVGTFILIFAATAGPIVNQKYDGAETLIGNAACAGLAVMI 117

Query: 121 VILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFHPIMGG 180
           VILSTGHISGAHLNP++TIAFAAL+HFPWKHVP YI AQ+ AS+CA+FALKG+FHP M G
Sbjct: 118 VILSTGHISGAHLNPSLTIAFAALRHFPWKHVPAYIAAQVSASICASFALKGVFHPFMSG 177

Query: 181 GVTVPSAGYGEAFALEFIISFNLMFVVTAVATDTRAV 217
           GVTVPS   G+AFALEFII+FNL+FVVTAVATDTRAV
Sbjct: 178 GVTVPSVSTGQAFALEFIITFNLLFVVTAVATDTRAV 214

Length = 298

>gnl|CDD|165748 PLN00182, PLN00182, putative aquaporin NIP4; Provisional

 Score =  138 bits (348), Expect = 5e-40
 Identities = 75/156 (48%), Positives = 98/156 (62%), Gaps = 3/156 (1%)

Query: 64  CSLPPPPVSLARKVGAEFVGTLILIFAGTATAIVNQKTQGSETLIGLAGSTGLAVMVVIL 123
               P  V L +K+ AE +GT  +IF+G    +VN    G+ T  G+  + GL VMV+I 
Sbjct: 32  ICTSPSIVCLTQKLIAEMIGTYFIIFSGCGVVVVNVLYGGTITFPGICVTWGLIVMVMIY 91

Query: 124 STGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFH--PIMGGG 181
           STGHISGAH NPAVT+ FA  + FPW  VP+YIGAQ+  SL A+  L+ +F+  P    G
Sbjct: 92  STGHISGAHFNPAVTVTFAIFRRFPWYQVPLYIGAQLTGSLLASLTLRLMFNVTPEAFFG 151

Query: 182 VTVPSAGYGEAFALEFIISFNLMFVVTAVATDTRAV 217
            T P+   G+A   E IISF LMFV++ VATD+RAV
Sbjct: 152 -TTPTDSSGQALVAEIIISFLLMFVISGVATDSRAV 186

Length = 283

>gnl|CDD|177778 PLN00184, PLN00184, aquaporin NIP1; Provisional

 Score =  128 bits (323), Expect = 3e-36
 Identities = 70/163 (42%), Positives = 98/163 (60%), Gaps = 12/163 (7%)

Query: 65  SLPPPPVSLARKVGAEFVGTLILIFAGTATAIVNQKTQGSETLIGLAGSTGLAVMVVILS 124
           SL    V   +K+ AE +GT  L+F G A+ +VN +     TL G+A   GL +MV+I S
Sbjct: 45  SLLSVSVPFLQKLIAEVLGTYFLVFTGCASVVVNMQNDNVVTLPGIAIVWGLTIMVLIYS 104

Query: 125 TGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIF---------- 174
            GHISGAH+NPAVTIAFA+   FP K VP Y+ +Q++ S  AA  L+ +F          
Sbjct: 105 LGHISGAHINPAVTIAFASCGRFPLKQVPAYVISQVIGSTLAAATLRLLFGLDHDVCSGK 164

Query: 175 HPIMGGGVTVPSAGYGEAFALEFIISFNLMFVVTAVATDTRAV 217
           H +  G  + P     +AF +EFI++F LMF+++ VATD RA+
Sbjct: 165 HDVFIG--SSPVGSDLQAFVMEFIVTFYLMFIISGVATDNRAI 205

Length = 296

>gnl|CDD|238204 cd00333, MIP, Major intrinsic protein (MIP) superfamily

 Score =  122 bits (308), Expect = 1e-34
 Identities = 58/158 (36%), Positives = 83/158 (52%), Gaps = 14/158 (8%)

Query: 75  RKVGAEFVGTLILIFAGTATAI-VNQKTQGSETLIGLAGSTGLAVMVVILSTGHISGAHL 133
           RK  AEF+GT +L+F G  + + V      S  L+G+A + G A+ V++ + GHISG H+
Sbjct: 1   RKYLAEFLGTFLLVFFGCGSVLAVKLAGGASGGLLGIALAWGFAIFVLVYAVGHISGGHI 60

Query: 134 NPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIF-----------HPIMGGGV 182
           NPAVT+A A    FP   V  YI AQ++ ++  A  L G++           + + G   
Sbjct: 61  NPAVTLALAVGGRFPLIRVIPYIIAQLLGAILGAALLYGLYYGLYLEFLGANNIVAGIFG 120

Query: 183 TVPSAGY--GEAFALEFIISFNLMFVVTAVATDTRAVS 218
           T PS G   G AF +EFI +F L+ VV A   D     
Sbjct: 121 TYPSPGVSNGNAFFVEFIGTFILVLVVFATTDDPNGPP 158

Members of the MIP superfamily function as membrane channels that selectively transport water, small neutral molecules, and ions out of and between cells. The channel proteins share a common fold: the N-terminal cytosolic portion followed by six transmembrane helices, which might have arisen through gene duplication. On the basis of sequence similarity and functional characteristics, the superfamily can be subdivided into two major groups: water-selective channels called aquaporins (AQPs) and glycerol uptake facilitators (GlpFs). AQPs are found in all three kingdoms of life, while GlpFs have been characterized only within microorganisms. Length = 228

>gnl|CDD|215092 PLN00183, PLN00183, putative aquaporin NIP7; Provisional

 Score =  116 bits (291), Expect = 1e-31
 Identities = 59/155 (38%), Positives = 86/155 (55%)

Query: 64  CSLPPPPVSLARKVGAEFVGTLILIFAGTATAIVNQKTQGSETLIGLAGSTGLAVMVVIL 123
           C      ++ AR V AE VGT IL+F         Q + G   L+  A + GL V+VV+ 
Sbjct: 35  CLPYDMDLNPARMVLAEMVGTFILMFCVCGIIASTQLSGGEVGLLEYAATAGLTVVVVVF 94

Query: 124 STGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFHPIMGGGVT 183
           S G ISGAH+NP+VTIAFA   HFPW  VP+YI AQ + S+ A +    ++        T
Sbjct: 95  SIGSISGAHVNPSVTIAFATFGHFPWSKVPLYITAQTVGSVLATYVGVSVYGVKADLMTT 154

Query: 184 VPSAGYGEAFALEFIISFNLMFVVTAVATDTRAVS 218
            P+ G   AF +EFI +F +MF+  ++ +  +++ 
Sbjct: 155 KPAQGCSSAFWVEFIATFIVMFLAASLTSQPQSLG 189

Length = 274

>gnl|CDD|215807 pfam00230, MIP, Major intrinsic protein

 Score =  113 bits (284), Expect = 4e-31
 Identities = 58/153 (37%), Positives = 85/153 (55%), Gaps = 8/153 (5%)

Query: 71  VSLARKVGAEFVGTLILIFAGTATAI-VNQKTQGSETLIGLAGSTGLAVMVVILSTGHIS 129
           VS  R V AEF+ TL+ +F G  +A+ V +   G   L+ +A + GLA+  ++  TGHIS
Sbjct: 5   VSFWRAVIAEFLATLLFVFFGVGSALGVKKLYGG---LLAVALAFGLALFTLVYCTGHIS 61

Query: 130 GAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFHPIM--GGGVTVPSA 187
           GAHLNPAVT A    +         YI AQ++ ++C A  LKG+ + +   GG     + 
Sbjct: 62  GAHLNPAVTFALLVGRRISLLRAIYYIIAQLLGAICGAALLKGVTNGLQRAGGFANSLAP 121

Query: 188 GY--GEAFALEFIISFNLMFVVTAVATDTRAVS 218
           G   G+AF +E I++F L++ V A   D R  S
Sbjct: 122 GVNAGQAFVVEIILTFQLVYTVFATTDDPRNGS 154

MIP (Major Intrinsic Protein) family proteins exhibit essentially two distinct types of channel properties: (1) specific water transport by the aquaporins, and (2) small neutral solutes transport, such as glycerol by the glycerol facilitators. Length = 218

>gnl|CDD|233156 TIGR00861, MIP, MIP family channel proteins

 Score =  111 bits (279), Expect = 2e-30
 Identities = 58/150 (38%), Positives = 80/150 (53%), Gaps = 10/150 (6%)

Query: 79  AEFVGTLILIFAGTATAIVNQKTQ-----GSETLIGLAGSTGLAVMVVILSTGHISGAHL 133
           AEF+GT +L+F G  +A+           G    +G+A + GLAV  ++   G ISGAHL
Sbjct: 1   AEFLGTFLLVFFGVGSALGVNVAGAYGAVGGGQFLGVALAFGLAVATLVYCVGGISGAHL 60

Query: 134 NPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFHPIMGGG---VTVPSAGY- 189
           NPAVTIA    + FP K VPVYI AQ++ ++  A  L G+   +  G        SAG  
Sbjct: 61  NPAVTIALLLGRRFPLKRVPVYIVAQLIGAILGAALLYGLTSGLFPGNLAVNGSASAGVS 120

Query: 190 -GEAFALEFIISFNLMFVVTAVATDTRAVS 218
            G+AF +EFI +  L+ V+ A   D   V 
Sbjct: 121 SGQAFFVEFIGTAILVLVIFATTDDRNRVP 150

1.A.8 The Major Intrinsic Protein (MIP) FamilyThe MIP family is large and diverse, possessing over 100 members that all form transmembrane channels. These channel proteins function in water, smallcarbohydrate (e.g., glycerol), urea, NH3, CO2 and possibly ion transport by an energy independent mechanism. They are found ubiquitously in bacteria, archaeaand eukaryotes. The MIP family contains two major groups of channels: aquaporins and glycerol facilitators.The known aquaporins cluster loosely together as do the known glycerol facilitators. MIP family proteins are believed to form aqueous pores that selectively allow passive transport of their solute(s) across the membrane with minimal apparent recognition. Aquaporins selectively transport water (but not glycerol) while glycerol facilitators selectively transport glycerol but not water. Some aquaporins can transport NH3 and CO2. Glycerol facilitators function as solute nonspecific channels, and may transport glycerol, dihydroxyacetone, propanediol, urea and other small neutral molecules in physiologically importantprocesses. Some members of the family, including the yeast FPS protein (TC #1.A.8.5.1) and tobacco NtTIPA may transport both water and small solutes [Transport and binding proteins, Unknown substrate]. Length = 216

>gnl|CDD|223653 COG0580, GlpF, Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) [Carbohydrate transport and metabolism]

 Score =  108 bits (273), Expect = 3e-29
 Identities = 59/161 (36%), Positives = 86/161 (53%), Gaps = 15/161 (9%)

Query: 71  VSLARKVGAEFVGTLILIFAGT-ATAIVNQKTQGSE--TLIGLAGSTGLAVMVVILSTGH 127
            +L +K+ AEF+GT +LIF G  + A V  K   +     +G+A + GL V+V I + G 
Sbjct: 2   TTLTKKLLAEFLGTFLLIFFGNGSVAAVALKGSKALGGGWLGIALAWGLGVLVAIYAFGG 61

Query: 128 ISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFHP----------- 176
           ISGAHLNPAVTIA A    FPW+ V  YI AQ++ +   A  L  +++            
Sbjct: 62  ISGAHLNPAVTIALAVRGRFPWRKVLPYIVAQVLGAFAGAALLYLLYYGKILETEGDPLA 121

Query: 177 IMGGGVTVPS-AGYGEAFALEFIISFNLMFVVTAVATDTRA 216
            +G   T P     G+AF +EF+ +F L+  + A+  D  A
Sbjct: 122 SLGAFSTSPGGYSLGQAFLIEFVGTFVLVLGILALTDDGNA 162

Length = 241

>gnl|CDD|240230 PTZ00016, PTZ00016, aquaglyceroporin; Provisional

 Score = 83.3 bits (206), Expect = 3e-19
 Identities = 47/171 (27%), Positives = 72/171 (42%), Gaps = 20/171 (11%)

Query: 59  LPSVSCSLPPPPVSLARKVGAEFVGTLILIFAGTATAIVNQKTQGSE-TLIGLAGSTGLA 117
               +   P       R+  AEF+GT +L+F G    +    T G+    + +    GL 
Sbjct: 35  PGGQNFWAPREYRPNVREYVAEFLGTFVLLFFGEG-VVATTHTVGNNGDYLAITIGWGLG 93

Query: 118 VMVVILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFH-- 175
           V   +L +  ISG HLNPAVT+  A    FPWK +P Y  AQ++ +   A  + G+++  
Sbjct: 94  VTFGLLVSAGISGGHLNPAVTLGNAVFGKFPWKKLPGYFVAQLLGAFVGAACVYGLYYGF 153

Query: 176 ----------------PIMGGGVTVPSAGYGEAFALEFIISFNLMFVVTAV 210
                              G   T P  G   A   E I++  L+ V+ A+
Sbjct: 154 FKDHGIPELPWETMANGFAGVFATYPREGNFYAIFSELILTAILLLVILAI 204

Length = 294

>gnl|CDD|235453 PRK05420, PRK05420, aquaporin Z; Provisional

 Score = 76.5 bits (189), Expect = 4e-17
 Identities = 54/160 (33%), Positives = 76/160 (47%), Gaps = 19/160 (11%)

Query: 73  LARKVGAEFVGTLILIFAGTATAIVNQKTQGSETLIGLAG---STGLAVMVVILSTGHIS 129
           + +K+ AEF GT  L+F G  +A++       E  IG  G   + GL V+ +  + GHIS
Sbjct: 1   MFKKLAAEFFGTFWLVFGGCGSAVL--AAAFPELGIGFLGVALAFGLTVLTMAYAVGHIS 58

Query: 130 GAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFHPIMG---GGVTVPS 186
           G H NPAV++   A   FP K +  YI AQ++  + AA  L  I     G    G    S
Sbjct: 59  GGHFNPAVSVGLWAGGRFPAKELVPYIIAQVVGGIAAAAVLYLIASGKAGFDLAGSGFAS 118

Query: 187 AGYGE----------AFALEFIISFNLMFVVTAVATDTRA 216
            GYGE          A   E +++   + V+   ATD RA
Sbjct: 119 NGYGEHSPGGYSLLAALVCEVVLTAFFLLVILG-ATDKRA 157

Length = 231

>gnl|CDD|177664 PLN00027, PLN00027, aquaporin TIP; Provisional

 Score = 57.1 bits (138), Expect = 6e-10
 Identities = 47/148 (31%), Positives = 70/148 (47%), Gaps = 16/148 (10%)

Query: 79  AEFVGTLILIFAGTATAIVNQK--TQGSET---LIGLAGSTGLAVMVVILSTGHISGAHL 133
           AEF+ TLI +FAG  + +   K    GS T   L+  A +   A+ V +    +ISG H+
Sbjct: 25  AEFISTLIFVFAGEGSGMAFNKLTDNGSTTPAGLVAAALAHAFALFVAVSVGANISGGHV 84

Query: 134 NPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFHPIMGGGVTVP----SAGY 189
           NPAVT       +       +Y  AQ++ S+ A   LK        GG+       S+G 
Sbjct: 85  NPAVTFGAFIGGNITLLRGILYWIAQLLGSVVACLLLK-----FSTGGLETSAFSLSSGV 139

Query: 190 G--EAFALEFIISFNLMFVVTAVATDTR 215
           G   AF  E +++F L++ V A A D +
Sbjct: 140 GVWNAFVFEIVMTFGLVYTVYATAVDPK 167

Length = 252

>gnl|CDD|165733 PLN00166, PLN00166, aquaporin TIP2; Provisional

 Score = 52.6 bits (126), Expect = 2e-08
 Identities = 44/151 (29%), Positives = 69/151 (45%), Gaps = 16/151 (10%)

Query: 79  AEFVGTLILIFAGTATAIVNQKTQGSETL-----IGLAGSTGLAVMVVILSTGHISGAHL 133
           +EF+ TL+ +FAG  +AI   K      L     + +A +   A+ V +    +ISG HL
Sbjct: 23  SEFIATLLFVFAGVGSAIAFAKLTSDAALDPAGLVAVAVAHAFALFVGVSIAANISGGHL 82

Query: 134 NPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFHPIMGGGVTVPSAGYG--- 190
           NPAVT+  A   +        Y  AQ + S+ A   L       +  G +VP+ G     
Sbjct: 83  NPAVTLGLAIGGNITIITGFFYWIAQCLGSIVACLLLV-----FVTNGESVPTHGVAAGL 137

Query: 191 ---EAFALEFIISFNLMFVVTAVATDTRAVS 218
              E   +E +++F L++ V A A D +  S
Sbjct: 138 GAIEGVVMEIVVTFALVYTVYATAADPKKGS 168

Length = 250

>gnl|CDD|238204 cd00333, MIP, Major intrinsic protein (MIP) superfamily

 Score = 47.6 bits (114), Expect = 8e-07
 Identities = 29/107 (27%), Positives = 44/107 (41%), Gaps = 5/107 (4%)

Query: 64  CSLPPPPVSLARKVGAEFVGTLILIFAGTATAIVNQKTQGSETLIGLAGSTGLAVMVVIL 123
            + P P VS       EF+GT IL+    AT        G         + GL V  + L
Sbjct: 120 GTYPSPGVSNGNAFFVEFIGTFILVLVVFATTD---DPNGPPPGGLAPLAIGLLVAAIGL 176

Query: 124 STGHISGAHLNPAVTI--AFAALKHFPWKHVPVYIGAQIMASLCAAF 168
           + G I+GA +NPA ++  A        W +  VY    ++ ++  A 
Sbjct: 177 AGGPITGASMNPARSLGPALFTGLARHWHYFWVYWVGPLIGAIAGAL 223

Members of the MIP superfamily function as membrane channels that selectively transport water, small neutral molecules, and ions out of and between cells. The channel proteins share a common fold: the N-terminal cytosolic portion followed by six transmembrane helices, which might have arisen through gene duplication. On the basis of sequence similarity and functional characteristics, the superfamily can be subdivided into two major groups: water-selective channels called aquaporins (AQPs) and glycerol uptake facilitators (GlpFs). AQPs are found in all three kingdoms of life, while GlpFs have been characterized only within microorganisms. Length = 228

>gnl|CDD|215085 PLN00167, PLN00167, aquaporin TIP5; Provisional

 Score = 43.0 bits (101), Expect = 3e-05
 Identities = 44/149 (29%), Positives = 70/149 (46%), Gaps = 19/149 (12%)

Query: 79  AEFVGTLILIFAGTATAIVNQK-----TQGSETLIGLAGSTGLAVMVVILSTGHISGAHL 133
           AEF+ T   +FA   +A+ ++K          +L+ +A +   A+   +    +ISG H+
Sbjct: 27  AEFISTFFFVFAAVGSAMSSRKLMPDAASDPSSLLIVAIANAFALSSAVYIAANISGGHV 86

Query: 134 NPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFHPIMGGGVTVPS------- 186
           NPAVT   A   H        Y  +Q++AS+ A   LK     +   G  VP+       
Sbjct: 87  NPAVTFGMAVGGHISVPTAMFYWISQMLASVMACLFLK-----VTTVGQHVPTYKIAEEM 141

Query: 187 AGYGEAFALEFIISFNLMFVVTAVATDTR 215
            G+G A  LE +++F L++ V A A D R
Sbjct: 142 TGFG-ASVLEGVLTFGLVYTVYA-AGDPR 168

Length = 256

>gnl|CDD|223653 COG0580, GlpF, Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) [Carbohydrate transport and metabolism]

 Score = 41.5 bits (98), Expect = 1e-04
 Identities = 25/105 (23%), Positives = 39/105 (37%), Gaps = 15/105 (14%)

Query: 79  AEFVGTLILIFAGTATAIVNQKTQGSETLIGLAGSTGLAVMVVILSTGHISGAHLNPAVT 138
            EFVGT +L+    A         G   L       GL V  + LS G  +G  +NPA  
Sbjct: 141 IEFVGTFVLVLGILALTDDGNANAGFAPLA-----IGLLVTAIGLSLGPTTGTAINPARD 195

Query: 139 IA---------FAALKHFPWKHVPVYIGAQIMASLCAAFALKGIF 174
           +          +AA K     +  + +   I+ ++  A   K + 
Sbjct: 196 LGPRLAHSLAGWAANKGDSS-YFWIPVIGPIVGAILGALLYKLLL 239

Length = 241

>gnl|CDD|177663 PLN00026, PLN00026, aquaporin NIP; Provisional

 Score = 40.2 bits (94), Expect = 4e-04
 Identities = 32/108 (29%), Positives = 51/108 (47%), Gaps = 6/108 (5%)

Query: 60  PSVSCSLPPPPVSLARKVGAEFVGTLILIFAGTATAIVNQKTQGSETLIGLAGSTGLAVM 119
           P +S  +  P VS  +    EF+ T  L+F  TA A     T+    L G+A   G  VM
Sbjct: 173 PFMSGGVTVPSVSTGQAFALEFIITFNLLFVVTAVA---TDTRAVGELAGIA--VGATVM 227

Query: 120 VVILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAA 167
           + IL  G  +G  +NP  T+   A+    ++ + +Y+ A  + +L  A
Sbjct: 228 LNILVAGPSTGGSMNPVRTLG-PAVAAGNYRAIWIYLVAPTLGALAGA 274

Length = 298

>gnl|CDD|165748 PLN00182, PLN00182, putative aquaporin NIP4; Provisional

 Score = 39.9 bits (93), Expect = 4e-04
 Identities = 25/101 (24%), Positives = 48/101 (47%), Gaps = 6/101 (5%)

Query: 69  PPVSLARKVGAEFVGTLILIFAGTATAIVNQKTQGSETLIGLAGSTGLAVMVVILSTGHI 128
           P  S  + + AE + + +L+F  +  A  ++       L G+A   G+ +++ +   G I
Sbjct: 154 PTDSSGQALVAEIIISFLLMFVISGVATDSRAVG---ELAGIA--VGMTIILNVFVAGPI 208

Query: 129 SGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFA 169
           SGA +NPA ++  A +    +K + VYI    +  +   F 
Sbjct: 209 SGASMNPARSLGPAIVMG-RYKGIWVYIVGPFVGIIAGGFV 248

Length = 283

>gnl|CDD|215807 pfam00230, MIP, Major intrinsic protein

 Score = 39.6 bits (93), Expect = 5e-04
 Identities = 25/106 (23%), Positives = 43/106 (40%), Gaps = 4/106 (3%)

Query: 64  CSLPPPPVSLARKVGAEFVGTLILIFAGTATAIVNQKTQGSETLIGLAGSTGLAVMVVIL 123
            +   P V+  +    E + T  L++   AT    +       +  LA   G AV +  L
Sbjct: 116 ANSLAPGVNAGQAFVVEIILTFQLVYTVFATTDDPRNGSLG-HVAPLA--IGFAVFLNHL 172

Query: 124 STGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFA 169
           + G  +GA +NPA +    A+  + W    VY    ++ +  AA  
Sbjct: 173 AGGPYTGASMNPARSFG-PAVVLWKWDDHWVYWVGPLIGAALAALV 217

MIP (Major Intrinsic Protein) family proteins exhibit essentially two distinct types of channel properties: (1) specific water transport by the aquaporins, and (2) small neutral solutes transport, such as glycerol by the glycerol facilitators. Length = 218

>gnl|CDD|233156 TIGR00861, MIP, MIP family channel proteins

 Score = 37.3 bits (87), Expect = 0.002
 Identities = 28/106 (26%), Positives = 43/106 (40%), Gaps = 6/106 (5%)

Query: 65  SLPPPPVSLARKVGAEFVGTLILIFAGTATAIVNQKTQGSETLIGLAG-STGLAVMVVIL 123
                 VS  +    EF+GT IL+    AT     +        G A  + GL V ++ L
Sbjct: 113 GSASAGVSSGQAFFVEFIGTAILVLVIFATTDDRNRV----PRGGFAPLAIGLLVFLIHL 168

Query: 124 STGHISGAHLNPAVTIAFAALKHF-PWKHVPVYIGAQIMASLCAAF 168
           S G  +G  +NPA ++  A       W +  VY    I+ ++  A 
Sbjct: 169 SMGPYTGTGMNPARSLGPALFAGLAGWGNHWVYWVGPIIGAILGAL 214

1.A.8 The Major Intrinsic Protein (MIP) FamilyThe MIP family is large and diverse, possessing over 100 members that all form transmembrane channels. These channel proteins function in water, smallcarbohydrate (e.g., glycerol), urea, NH3, CO2 and possibly ion transport by an energy independent mechanism. They are found ubiquitously in bacteria, archaeaand eukaryotes. The MIP family contains two major groups of channels: aquaporins and glycerol facilitators.The known aquaporins cluster loosely together as do the known glycerol facilitators. MIP family proteins are believed to form aqueous pores that selectively allow passive transport of their solute(s) across the membrane with minimal apparent recognition. Aquaporins selectively transport water (but not glycerol) while glycerol facilitators selectively transport glycerol but not water. Some aquaporins can transport NH3 and CO2. Glycerol facilitators function as solute nonspecific channels, and may transport glycerol, dihydroxyacetone, propanediol, urea and other small neutral molecules in physiologically importantprocesses. Some members of the family, including the yeast FPS protein (TC #1.A.8.5.1) and tobacco NtTIPA may transport both water and small solutes [Transport and binding proteins, Unknown substrate]. Length = 216

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	218
PLN00026	298	aquaporin NIP; Provisional	100.0
PLN00184	296	aquaporin NIP1; Provisional	99.98
KOG0223	238	consensus Aquaporin (major intrinsic protein famil	99.97
PLN00182	283	putative aquaporin NIP4; Provisional	99.97
COG0580	241	GlpF Glycerol uptake facilitator and related perme	99.97
KOG0224	316	consensus Aquaporin (major intrinsic protein famil	99.96
PF00230	227	MIP: Major intrinsic protein; InterPro: IPR000425	99.96
PTZ00016	294	aquaglyceroporin; Provisional	99.96
PLN00183	274	putative aquaporin NIP7; Provisional	99.95
PRK05420	231	aquaporin Z; Provisional	99.95
PLN00167	256	aquaporin TIP5; Provisional	99.95
PLN00027	252	aquaporin TIP; Provisional	99.95
PLN00166	250	aquaporin TIP2; Provisional	99.95
cd00333	228	MIP Major intrinsic protein (MIP) superfamily. Mem	99.93
TIGR00861	216	MIP MIP family channel proteins. processes. Some m	99.92
cd00333	228	MIP Major intrinsic protein (MIP) superfamily. Mem	99.75
PLN00182	283	putative aquaporin NIP4; Provisional	99.75
PLN00026	298	aquaporin NIP; Provisional	99.73
PLN00183	274	putative aquaporin NIP7; Provisional	99.71
TIGR00861	216	MIP MIP family channel proteins. processes. Some m	99.7
KOG0223	238	consensus Aquaporin (major intrinsic protein famil	99.69
PLN00184	296	aquaporin NIP1; Provisional	99.66
PLN00027	252	aquaporin TIP; Provisional	99.62
PTZ00016	294	aquaglyceroporin; Provisional	99.62
PLN00166	250	aquaporin TIP2; Provisional	99.61
COG0580	241	GlpF Glycerol uptake facilitator and related perme	99.6
PRK05420	231	aquaporin Z; Provisional	99.59
PLN00167	256	aquaporin TIP5; Provisional	99.55
PF00230	227	MIP: Major intrinsic protein; InterPro: IPR000425	99.54
KOG0224	316	consensus Aquaporin (major intrinsic protein famil	99.15

>PLN00026 aquaporin NIP; Provisional

Probab=100.00  E-value=5.9e-49  Score=348.64  Aligned_cols=211  Identities=74%  Similarity=1.203  Sum_probs=184.6

Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCcccccccccccchhh--HhhhcCCCCcccccCCCCChhHHHHHH
Q 027840            1 MDHEDVPSAPSTPATPGTPGAPLFGGFRGDHRGTNGRKSLLKSCKCFSVEE--WAIEDGRLPSVSCSLPPPPVSLARKVG   78 (218)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~~~   78 (218)
                      ||+|++|+.||+|+||||||+|||+|+|.|+.+ +++++.+++|+|+++++  |..++...    ++.+.++.+++|+++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~r~~l   75 (298)
T PLN00026          1 MDNEEVPSAPSTPATPGTPGGPLFGGFRVDSLS-YGDRKLLPSCKCFPVEALEWGRLPTCF----CDLPPPDVSLTRKLG   75 (298)
T ss_pred             CCcccCCCCCCCCCCCCCCCCcccccccccccc-cccccccccccccccccccccccCccc----ccCCCCCchHHHHHH
Confidence            899999999999999999999999999999777 77888999999999884  55444322    344566778999999


Q ss_pred             HHHHHHHHHHHHHHhhhhhccccCCCchhHHHHHHHHHHHHHHHHhhCCCCccccchHhhHHHHHhcCCCcCcchhhhhh
Q 027840           79 AEFVGTLILIFAGTATAIVNQKTQGSETLIGLAGSTGLAVMVVILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGA  158 (218)
Q Consensus        79 aEfiGTf~lvf~~~~~~~~~~~~~~~~~~~~~al~~Gl~v~~~i~~~g~iSGahlNPAvTla~~l~g~~~~~~~~~yiia  158 (218)
                      +||+|||+|+|+++++...+.+.++..+++.++++||+++++.+++++++||+|+|||||+++++.++++|.++|+||++
T Consensus        76 aEfiGTflLvf~g~~~~~~~~~~~~~~~~~~ial~~GlaV~~~i~~~g~ISGaHlNPAVTla~al~g~~~~~~~~~Yiia  155 (298)
T PLN00026         76 AEFVGTFILIFAATAGPIVNQKYDGAETLIGNAACAGLAVMIVILSTGHISGAHLNPSLTIAFAALRHFPWKHVPAYIAA  155 (298)
T ss_pred             HHHHHHHHHHHHHHHHHHhccccCCccchHHHHHHHHHHHHHHHHHhhccCccccCHHHHHHHHHhCCCcHHHHHHHHHH
Confidence            99999999999999865544333333457778899999999999999999999999999999999999999999999999


Q ss_pred             hhhhHHHHHHHHHHHhcCccCCccccCCccHHHHHHHHHHHHHHHHHHHHHhhcCCCC
Q 027840          159 QIMASLCAAFALKGIFHPIMGGGVTVPSAGYGEAFALEFIISFNLMFVVTAVATDTRA  216 (218)
Q Consensus       159 Q~lGa~~ga~l~~~~~~~~~~~~~t~p~~s~~~~f~~E~i~Tf~L~~~il~va~d~r~  216 (218)
                      |++|+++|+++++.++++...++.+.|+.+.+|+|+.|+++||+|+++++++++|+|+
T Consensus       156 QilGAi~aa~~~~~~~~~~~~~g~t~p~~s~~~a~~~Efi~TfiLv~vi~~v~~~~~~  213 (298)
T PLN00026        156 QVSASICASFALKGVFHPFMSGGVTVPSVSTGQAFALEFIITFNLLFVVTAVATDTRA  213 (298)
T ss_pred             HHHHHHHHHHHHHHHhcccccCceeeecccHHHHHHHHHHHHHHHHHhheeeecCCCC
Confidence            9999999999999999876666678888899999999999999999999988777764

>PLN00184 aquaporin NIP1; Provisional

Probab=99.98  E-value=1.1e-31  Score=238.55  Aligned_cols=148  Identities=45%  Similarity=0.672  Sum_probs=125.5

Q ss_pred             CChhHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCchhHHHHHHHHHHHHHHHHhhCCCCccccchHhhHHHHHhcCCC
Q 027840           69 PPVSLARKVGAEFVGTLILIFAGTATAIVNQKTQGSETLIGLAGSTGLAVMVVILSTGHISGAHLNPAVTIAFAALKHFP  148 (218)
Q Consensus        69 ~~~~l~~~~~aEfiGTf~lvf~~~~~~~~~~~~~~~~~~~~~al~~Gl~v~~~i~~~g~iSGahlNPAvTla~~l~g~~~  148 (218)
                      .+.+++|++++||+|||+|+|+++++.......+...+++.++++||+++++.+++++++||+|+|||||+++++.++++
T Consensus        49 ~~~~~~~~~~aEfiGTflLvf~g~g~~~~~~~~~~~~~~~~iai~~Gl~v~~~i~~~g~iSGaH~NPAVTla~al~g~~~  128 (296)
T PLN00184         49 VSVPFLQKLIAEVLGTYFLVFTGCASVVVNMQNDNVVTLPGIAIVWGLTIMVLIYSLGHISGAHINPAVTIAFASCGRFP  128 (296)
T ss_pred             CChHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCccccHHHHHHHHHHHHHHHHHhcCCCccccCHHHHHHHHHhCCCC
Confidence            56688999999999999999999986543322222235678899999999999999999999999999999999999999


Q ss_pred             cCcchhhhhhhhhhHHHHHHHHHHHhcCccC---C-----ccccCCccHHHHHHHHHHHHHHHHHHHHHhhcCCCC
Q 027840          149 WKHVPVYIGAQIMASLCAAFALKGIFHPIMG---G-----GVTVPSAGYGEAFALEFIISFNLMFVVTAVATDTRA  216 (218)
Q Consensus       149 ~~~~~~yiiaQ~lGa~~ga~l~~~~~~~~~~---~-----~~t~p~~s~~~~f~~E~i~Tf~L~~~il~va~d~r~  216 (218)
                      |.++|+||++|++|+++|+++++.++.....   +     ..+.|..+.+++|+.|+++||+|++++++++.|+|+
T Consensus       129 ~~~~~~YiiaQllGA~lga~~~~~l~~~~~~~~~~~~~~~~~t~p~~s~~~af~~E~i~TfvLv~~il~~~~~~~~  204 (296)
T PLN00184        129 LKQVPAYVISQVIGSTLAAATLRLLFGLDHDVCSGKHDVFIGSSPVGSDLQAFVMEFIVTFYLMFIISGVATDNRA  204 (296)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhcchhhccccccceeeccCcCCcHHHHHHHHHHHHHHHHHHHHheeccCcC
Confidence            9999999999999999999999998853221   1     124466789999999999999999999998777664

>KOG0223 consensus Aquaporin (major intrinsic protein family) [Carbohydrate transport and metabolism]

Probab=99.97  E-value=3.9e-31  Score=228.04  Aligned_cols=150  Identities=41%  Similarity=0.592  Sum_probs=133.6

Q ss_pred             CCChhHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCchhHHHHHHHHHHHHHHHHhhCCCCccccchHhhHHHHHhcCC
Q 027840           68 PPPVSLARKVGAEFVGTLILIFAGTATAIVNQKTQGSETLIGLAGSTGLAVMVVILSTGHISGAHLNPAVTIAFAALKHF  147 (218)
Q Consensus        68 ~~~~~l~~~~~aEfiGTf~lvf~~~~~~~~~~~~~~~~~~~~~al~~Gl~v~~~i~~~g~iSGahlNPAvTla~~l~g~~  147 (218)
                      ...++.+|++++||++|++++|+++++...+++.....+.+.+++++|+++++.++++|++||+|+|||||+++++.|++
T Consensus         5 ~~~~~~~~~~~aEF~~T~~~vf~g~~~~~~~~~~~~~~~l~~ial~~Gl~v~v~i~~~g~iSGaH~NPAVT~a~~~~~~i   84 (238)
T KOG0223|consen    5 LLSVSFLRALIAEFLATFLFVFAGCGSVVVNPKYGGPVGLLGIALAFGLAVFVLVYSTGHISGAHFNPAVTLAFAVGGKI   84 (238)
T ss_pred             cccHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCchhHHHHHHHHHHHHHHHhhhccccccccCHHHHHHHHHhCCC
Confidence            34568899999999999999999999877777655556688999999999999999999999999999999999999999


Q ss_pred             CcCcchhhhhhhhhhHHHHHHHHHHHhcCc---cCCcc--ccCCccHHHHHHHHHHHHHHHHHHHHHhhcCCCCC
Q 027840          148 PWKHVPVYIGAQIMASLCAAFALKGIFHPI---MGGGV--TVPSAGYGEAFALEFIISFNLMFVVTAVATDTRAV  217 (218)
Q Consensus       148 ~~~~~~~yiiaQ~lGa~~ga~l~~~~~~~~---~~~~~--t~p~~s~~~~f~~E~i~Tf~L~~~il~va~d~r~~  217 (218)
                      ++.++..||++|++|+++|+.+++.+.+..   .....  ..++.+.+|+++.|++.||+|+++++++++|+|+.
T Consensus        85 sl~~~~~Y~vaQ~lGa~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~E~ilTf~Lv~~v~~~a~d~~~~  159 (238)
T KOG0223|consen   85 SLFRAVAYIVAQLLGAIAGAALLKVVTPGQYNRKGLGLTGLAPGLSTGQGLVIEIILTFILVFTVFATATDPRRS  159 (238)
T ss_pred             cHHHhHHHHHHHHHHHHHHHHHHheecCcccccCCcceeccCCCCCcchhHHHHHHHHHHHhheeEEEeecCCCc
Confidence            999999999999999999999999988874   22222  23578999999999999999999999999999973

>PLN00182 putative aquaporin NIP4; Provisional

Probab=99.97  E-value=7.9e-30  Score=225.30  Aligned_cols=147  Identities=48%  Similarity=0.754  Sum_probs=124.4

Q ss_pred             ChhHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCchhHHHHHHHHHHHHHHHHhhCCCCccccchHhhHHHHHhcCCCc
Q 027840           70 PVSLARKVGAEFVGTLILIFAGTATAIVNQKTQGSETLIGLAGSTGLAVMVVILSTGHISGAHLNPAVTIAFAALKHFPW  149 (218)
Q Consensus        70 ~~~l~~~~~aEfiGTf~lvf~~~~~~~~~~~~~~~~~~~~~al~~Gl~v~~~i~~~g~iSGahlNPAvTla~~l~g~~~~  149 (218)
                      ..+++|++++||+|||+|+|+++++...........+.+.++++||+++++.+++++++||+|+|||||+++++.++++|
T Consensus        38 ~~~~~~~~~aEflgTflLvf~g~g~~~~~~~~~~~~~~~~iala~Gl~v~~~i~~~g~iSGah~NPAVTla~~~~~~~~~  117 (283)
T PLN00182         38 IVCLTQKLIAEMIGTYFIIFSGCGVVVVNVLYGGTITFPGICVTWGLIVMVMIYSTGHISGAHFNPAVTVTFAIFRRFPW  117 (283)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCcchHHHHHHHHHHHHHHHHHhcCCCccccCHHHHHHHHHHcCCCH
Confidence            46788999999999999999999865432211122346678889999999999999999999999999999999999999


Q ss_pred             CcchhhhhhhhhhHHHHHHHHHHHhcCccCC-ccccCCccHHHHHHHHHHHHHHHHHHHHHhhcCCCC
Q 027840          150 KHVPVYIGAQIMASLCAAFALKGIFHPIMGG-GVTVPSAGYGEAFALEFIISFNLMFVVTAVATDTRA  216 (218)
Q Consensus       150 ~~~~~yiiaQ~lGa~~ga~l~~~~~~~~~~~-~~t~p~~s~~~~f~~E~i~Tf~L~~~il~va~d~r~  216 (218)
                      .+++.||++|++|+++|+++++.++.....+ ..+.|+.+.+++|+.|+++||+|++++++++.|+|+
T Consensus       118 ~~~~~Yi~aQ~lGa~~ga~~~~~~~~~~~~~~~~~~p~~s~~~a~~~E~l~TfiLv~~i~~~~~~~~~  185 (283)
T PLN00182        118 YQVPLYIGAQLTGSLLASLTLRLMFNVTPEAFFGTTPTDSSGQALVAEIIISFLLMFVISGVATDSRA  185 (283)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcccccceeeCCCCcchHHHHHHHHHHHHHHHHHHHhheecccc
Confidence            9999999999999999999999988543222 235677889999999999999999999998767654

>COG0580 GlpF Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) [Carbohydrate transport and metabolism]

Probab=99.97  E-value=3e-30  Score=222.38  Aligned_cols=144  Identities=38%  Similarity=0.565  Sum_probs=123.1

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhhhhhcc--cc-CCCchhHHHHHHHHHHHHHHHHhhCCCCccccchHhhHHHHHhcCCC
Q 027840           72 SLARKVGAEFVGTLILIFAGTATAIVNQ--KT-QGSETLIGLAGSTGLAVMVVILSTGHISGAHLNPAVTIAFAALKHFP  148 (218)
Q Consensus        72 ~l~~~~~aEfiGTf~lvf~~~~~~~~~~--~~-~~~~~~~~~al~~Gl~v~~~i~~~g~iSGahlNPAvTla~~l~g~~~  148 (218)
                      ++.+++++||+||++|+++++++.....  +. ....++..++++||+.|++.++++|++||+|+|||||+++++.|+++
T Consensus         3 ~~~~~~~aEflGT~~Li~~G~G~~a~~~l~~~~~~~~~~~~i~~~wGl~V~~~iy~~g~iSGaHlNPAVTi~la~~g~fp   82 (241)
T COG0580           3 TLTKKLLAEFLGTFLLIFFGNGSVAAVALKGSKALGGGWLGIALAWGLGVLVAIYAFGGISGAHLNPAVTIALAVRGRFP   82 (241)
T ss_pred             cHHHHHHHHHHHHHHHHHhhccHHHHHHhccccccccceeehhHHHHHHHHHHHHhccCcCccccChHHHHHHHHhCCCC
Confidence            4678999999999999999998654332  21 23445778999999999999999999999999999999999999999


Q ss_pred             cCcchhhhhhhhhhHHHHHHHHHHHhcCccC-----------CccccCC-ccHHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 027840          149 WKHVPVYIGAQIMASLCAAFALKGIFHPIMG-----------GGVTVPS-AGYGEAFALEFIISFNLMFVVTAVATDTR  215 (218)
Q Consensus       149 ~~~~~~yiiaQ~lGa~~ga~l~~~~~~~~~~-----------~~~t~p~-~s~~~~f~~E~i~Tf~L~~~il~va~d~r  215 (218)
                      |++++.||++|++|+++|+.+++.+|.+...           -.+|.|+ .+..++|+.|+++||+|+++|+++.+|+|
T Consensus        83 ~~~v~~YivAQ~lGA~~ga~l~~~~~~~~~~~~~~~~~~~~g~~~t~p~~~~~~~~fl~E~v~T~~L~~~Ila~~~~~~  161 (241)
T COG0580          83 WRKVLPYIVAQVLGAFAGAALLYLLYYGKILETEGDPLASLGAFSTSPGGYSLGQAFLIEFVGTFVLVLGILALTDDGN  161 (241)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhcCCchhhccccccCCCcccHHHHHHHHHHHHHHHHHHHHHhhccCc
Confidence            9999999999999999999999988865321           1246675 47899999999999999999999877665

>KOG0224 consensus Aquaporin (major intrinsic protein family) [Carbohydrate transport and metabolism]

Probab=99.96  E-value=4.7e-30  Score=224.84  Aligned_cols=147  Identities=33%  Similarity=0.545  Sum_probs=125.7

Q ss_pred             ChhHHHHHHHHHHHHHHHHHHHHhhhhhccccC-CCchhHHHHHHHHHHHHHHHHhhCCCCccccchHhhHHHHHhcCCC
Q 027840           70 PVSLARKVGAEFVGTLILIFAGTATAIVNQKTQ-GSETLIGLAGSTGLAVMVVILSTGHISGAHLNPAVTIAFAALKHFP  148 (218)
Q Consensus        70 ~~~l~~~~~aEfiGTf~lvf~~~~~~~~~~~~~-~~~~~~~~al~~Gl~v~~~i~~~g~iSGahlNPAvTla~~l~g~~~  148 (218)
                      .+.+.|.+++||+||++|+++++++.....-++ ..+.++.+.++||+++++.+++.|.+||+|+|||||+++++.||++
T Consensus        28 ~~~l~Re~LAEFlGT~vL~~~G~g~v~Q~vls~g~~g~~~~vnlgwg~av~~gVyvag~iSGgHlNPAVS~a~~~~g~~p  107 (316)
T KOG0224|consen   28 RNELLREFLAEFLGTFVLVVFGLGSVAQAVLSGGTGGSFIGVNLGWGFAVMMGVYVAGRISGGHLNPAVSLAMCILGRLP  107 (316)
T ss_pred             HHHHHHHHHHHHHhHHHHHhhccceeEEEEeccCCCCceEEEEehHhHHHHHHHHhhccccccccCHHHHHHHHHhcCCC
Confidence            467899999999999999999998543222221 2234677889999999999999999999999999999999999999


Q ss_pred             cCcchhhhhhhhhhHHHHHHHHHHHhcCcc---CCc--------------cccC--CccHHHHHHHHHHHHHHHHHHHHH
Q 027840          149 WKHVPVYIGAQIMASLCAAFALKGIFHPIM---GGG--------------VTVP--SAGYGEAFALEFIISFNLMFVVTA  209 (218)
Q Consensus       149 ~~~~~~yiiaQ~lGa~~ga~l~~~~~~~~~---~~~--------------~t~p--~~s~~~~f~~E~i~Tf~L~~~il~  209 (218)
                      |+++++|+++|++||++|++..|.+|.+.+   .++              +|+|  ..+.+++|+.|+++|.+|+.++++
T Consensus       108 ~~k~p~Y~~aQ~iGAF~gaa~~y~~y~d~i~~f~Gg~~~vtgp~aTAgiFaTyP~p~ls~~n~F~DqfigTa~L~~~l~a  187 (316)
T KOG0224|consen  108 WKKFPVYVLAQFIGAFLGAATVYGLYYDAINEFDGGNRTVTGPKATAGIFATYPAPHLSLWNGFFDQFIGTAMLVLCLFA  187 (316)
T ss_pred             hhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEecCCccceEEEeecCchHhhhhHHHHHHHHHHHHHHhheeE
Confidence            999999999999999999999999987542   121              3556  468999999999999999999999


Q ss_pred             hhcCCCCC
Q 027840          210 VATDTRAV  217 (218)
Q Consensus       210 va~d~r~~  217 (218)
                      + +|+|++
T Consensus       188 I-~D~rN~  194 (316)
T KOG0224|consen  188 I-TDKRNP  194 (316)
T ss_pred             E-ecCCCC
Confidence            7 899873

>PF00230 MIP: Major intrinsic protein; InterPro: IPR000425 A number of transmembrane (TM) channel proteins can be grouped together on the basis of sequence similarities [, , , , ]

Probab=99.96  E-value=6.3e-29  Score=212.06  Aligned_cols=148  Identities=40%  Similarity=0.567  Sum_probs=124.9

Q ss_pred             ChhHHHHHHHHHHHHHHHHHHHHhhhhh-ccccCC-----CchhHHHHHHHHHHHHHHHHhhCCCCccccchHhhHHHHH
Q 027840           70 PVSLARKVGAEFVGTLILIFAGTATAIV-NQKTQG-----SETLIGLAGSTGLAVMVVILSTGHISGAHLNPAVTIAFAA  143 (218)
Q Consensus        70 ~~~l~~~~~aEfiGTf~lvf~~~~~~~~-~~~~~~-----~~~~~~~al~~Gl~v~~~i~~~g~iSGahlNPAvTla~~l  143 (218)
                      +.+++|++++||+||++++|+++++... ......     ..+...+++++|+.+++.++.++++||+|+|||||++.++
T Consensus         4 ~~~~~r~~~aEfigT~~lvf~~~~~~~~~~~~~~~~~~~~~~~~~~ial~~g~~~~~~i~~~~~iSGaH~NPaVTla~~l   83 (227)
T PF00230_consen    4 SPSLWRKFLAEFIGTFLLVFFGCGSVAALNGSTSSSGSDVSGGWLQIALAWGLALAALIYAFGPISGAHFNPAVTLAFAL   83 (227)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSSTTSTTSSHHHHHHHHHHHHHHHHHHHHHHHHHTSS-SHHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccHHHHHHHHHHhhhhhhhhhhhccccccccchhhheee
Confidence            4578999999999999999999985442 222211     2357788999999999999999999999999999999999


Q ss_pred             hcCCCcCcchhhhhhhhhhHHHHHHHHHHHhcCc---cCCcccc--CCccHHHHHHHHHHHHHHHHHHHHHhhcCCCCC
Q 027840          144 LKHFPWKHVPVYIGAQIMASLCAAFALKGIFHPI---MGGGVTV--PSAGYGEAFALEFIISFNLMFVVTAVATDTRAV  217 (218)
Q Consensus       144 ~g~~~~~~~~~yiiaQ~lGa~~ga~l~~~~~~~~---~~~~~t~--p~~s~~~~f~~E~i~Tf~L~~~il~va~d~r~~  217 (218)
                      .|+++|.+.+.|+++|++|+++|+++.+.++++.   .....+.  |+.+..++|+.|+++|++|++++++++.|+|+.
T Consensus        84 ~g~~~~~~~~~Yi~aQ~lGa~~g~~l~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~E~~~t~il~~~i~~~~~~~~~~  162 (227)
T PF00230_consen   84 TGRISWKKAIVYIIAQFLGAFLGALLVYALYPDSNSAAGIFATTPPPGISLGQAFFSEFIGTFILVLVILAVADDKRKF  162 (227)
T ss_dssp             TTSSSHHHHHHHHHHHHHHHHHHHHHHHHHSTHHHTCTTTTSCGSTTTSSHHHHHHHHHHHHHHHHHHHHHHTSTTSSS
T ss_pred             eeeecccceeeEEeeccccccccccchhhcccCcccccccccccccccchhhhhhhhhhhhhhHHHhhhhhhccccccc
Confidence            9999999999999999999999999999998874   1222323  467899999999999999999999998777764

These include: Mammalian major intrinsic protein (MIP). MIP is the major component of lens fibre gap junctions. Mammalian aquaporins []. These proteins form water- specific channels that provide the plasma membranes of red cells and kidney prox imal and collecting tubules with high permeability to water, thereby permitting water to move in the direction of an osmotic gradient. Soybean nodulin-26, a major component of the peribacteroid membrane induced during nodulation in legume roots after Rhizobium infection. Plants tonoplast intrinsic proteins (TIP). There are various isoforms of TIP : alpha (seed), gamma, Rt (root), and Wsi (water-stress induced). These proteins may allow the diffusion of water, amino acids and/or peptides from the tonoplas t interior to the cytoplasm. Bacterial glycerol facilitator protein (gene glpF), which facilitates the mo vement of glycerol across the cytoplasmic membrane. Salmonella typhimurium propanediol diffusion fac ilitator (gene pduF). Yeast FPS1, a glycerol uptake/efflux facilitator protein. Drosophila neurogenic protein 'big brain' (bib). This protein may mediate in tercellular communication; it may functions by allowing the transport of certain molecules(s) and thereby sending a signal for an exodermal cell to become an ep idermoblast instead of a neuroblast. Yeast hypothetical protein YFL054c. A hypothetical protein from the pepX region of Lactococcus lactis. The structures of various members of the MIP family have been determined by means of X-ray diffraction [, , ], revealing the fold to comprise a right-handed bundle of 6 transmembrane (TM) alpha-helices [, , ]. Similarities in the N-and C-terminal halves of the molecule suggest that the proteins may have arisen through tandem, intragenic duplication of an ancestral protein that contained 3 TM domains []. Some of the proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins []. Aquaporin-CHIP (Aquaporin 1) belongs to the Colton blood group system and is associated with Co(a/b) antigen.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3NE2_A 2C32_A 1YMG_A 2B6P_A 3C02_A 2B5F_D 3CN6_A 3CN5_A 1Z98_M 3CLL_A ....

>PTZ00016 aquaglyceroporin; Provisional

Probab=99.96  E-value=1.2e-28  Score=218.96  Aligned_cols=147  Identities=31%  Similarity=0.497  Sum_probs=122.8

Q ss_pred             CChhHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCchhHHHHHHHHHHHHHHHHhhCCCCccccchHhhHHHHHhcCCC
Q 027840           69 PPVSLARKVGAEFVGTLILIFAGTATAIVNQKTQGSETLIGLAGSTGLAVMVVILSTGHISGAHLNPAVTIAFAALKHFP  148 (218)
Q Consensus        69 ~~~~l~~~~~aEfiGTf~lvf~~~~~~~~~~~~~~~~~~~~~al~~Gl~v~~~i~~~g~iSGahlNPAvTla~~l~g~~~  148 (218)
                      ..++++|++++||+||++|+|+++++.......+...+.+.++++||+++++.+++++++||+|+|||||+++++.++++
T Consensus        45 ~~~~~~~~~laEfigT~llvf~g~g~~~~~~~~~~~~~~~~ial~~Glav~~~i~~~g~iSG~h~NPAVTla~~l~g~i~  124 (294)
T PTZ00016         45 EYRPNVREYVAEFLGTFVLLFFGEGVVATTHTVGNNGDYLAITIGWGLGVTFGLLVSAGISGGHLNPAVTLGNAVFGKFP  124 (294)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcHHHHHHHHHHHHHHHHHhcccCcCccCHHHHHHHHHhccCC
Confidence            33678899999999999999999986543222121234667889999999999999999999999999999999999999


Q ss_pred             cCcchhhhhhhhhhHHHHHHHHHHHhcCccC--------------C----ccccCCccHHHHHHHHHHHHHHHHHHHHHh
Q 027840          149 WKHVPVYIGAQIMASLCAAFALKGIFHPIMG--------------G----GVTVPSAGYGEAFALEFIISFNLMFVVTAV  210 (218)
Q Consensus       149 ~~~~~~yiiaQ~lGa~~ga~l~~~~~~~~~~--------------~----~~t~p~~s~~~~f~~E~i~Tf~L~~~il~v  210 (218)
                      |.+++.|+++|++|+++|++++|.+|++...              .    ..+.|+.+..++|+.|+++||+|+++|+++
T Consensus       125 ~~~~~~YiiaQ~lGa~~ga~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~t~p~~s~~~a~~~E~i~T~iLv~~ila~  204 (294)
T PTZ00016        125 WKKLPGYFVAQLLGAFVGAACVYGLYYGFFKDHGIPELPWETMANGFAGVFATYPREGNFYAIFSELILTAILLLVILAI  204 (294)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHhhcCcccccccccccccceeeCCCCccHHHHHHHHHHHHHHHHHHHHHh
Confidence            9999999999999999999999988764210              0    134567788999999999999999999997


Q ss_pred             hcCCCC
Q 027840          211 ATDTRA  216 (218)
Q Consensus       211 a~d~r~  216 (218)
                       +|+|+
T Consensus       205 -~d~~~  209 (294)
T PTZ00016        205 -TDPNN  209 (294)
T ss_pred             -ccCcc
Confidence             56654

>PLN00183 putative aquaporin NIP7; Provisional

Probab=99.95  E-value=9.7e-28  Score=211.21  Aligned_cols=153  Identities=39%  Similarity=0.614  Sum_probs=127.4

Q ss_pred             cccCCCCChhHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCchhHHHHHHHHHHHHHHHHhhCCCCccccchHhhHHHH
Q 027840           63 SCSLPPPPVSLARKVGAEFVGTLILIFAGTATAIVNQKTQGSETLIGLAGSTGLAVMVVILSTGHISGAHLNPAVTIAFA  142 (218)
Q Consensus        63 ~~~~~~~~~~l~~~~~aEfiGTf~lvf~~~~~~~~~~~~~~~~~~~~~al~~Gl~v~~~i~~~g~iSGahlNPAvTla~~  142 (218)
                      +|.....+.+.+|++++||+|||+++|++++.....+...+..+++.+++++|+++++.+++++++||+|+|||||++++
T Consensus        34 ~~~~~~~~~~~~~~~laEfigTfllvf~~~g~~~~~~~~~~~~~~~~~al~~Gl~V~~~i~~~g~vSGah~NPAvTla~~  113 (274)
T PLN00183         34 GCLPYDMDLNPARMVLAEMVGTFILMFCVCGIIASTQLSGGEVGLLEYAATAGLTVVVVVFSIGSISGAHVNPSVTIAFA  113 (274)
T ss_pred             cccCCcCChHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCccchHHHHHHHHHHHHHHHHHhhccCccccCHHHHHHHH
Confidence            44444567788999999999999999999986544332222234667889999999999999999999999999999999


Q ss_pred             HhcCCCcCcchhhhhhhhhhHHHHHHHHHHHhcCccCCccccCCccHHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 027840          143 ALKHFPWKHVPVYIGAQIMASLCAAFALKGIFHPIMGGGVTVPSAGYGEAFALEFIISFNLMFVVTAVATDTR  215 (218)
Q Consensus       143 l~g~~~~~~~~~yiiaQ~lGa~~ga~l~~~~~~~~~~~~~t~p~~s~~~~f~~E~i~Tf~L~~~il~va~d~r  215 (218)
                      +.++++|.++|+||++|++|+++|+++++.++........+.|..+.+++++.|+++|++|+++++++..++|
T Consensus       114 l~g~i~~~~~~~Yi~aQ~lGa~~ga~l~~~~~~~~~~~~~~~p~~~~~~~~~~E~v~T~iLv~~i~~~~~~~~  186 (274)
T PLN00183        114 TFGHFPWSKVPLYITAQTVGSVLATYVGVSVYGVKADLMTTKPAQGCSSAFWVEFIATFIVMFLAASLTSQPQ  186 (274)
T ss_pred             HhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccCCCcccHHHHHHHHHHHHHHHHHhhheeecccc
Confidence            9999999999999999999999999999988865333334557677899999999999999999999755543

>PRK05420 aquaporin Z; Provisional

Probab=99.95  E-value=1.3e-27  Score=205.92  Aligned_cols=142  Identities=32%  Similarity=0.465  Sum_probs=117.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhhhcccc-CCCchhHHHHHHHHHHHHHHHHhhCCCCccccchHhhHHHHHhcCCCcCcc
Q 027840           74 ARKVGAEFVGTLILIFAGTATAIVNQKT-QGSETLIGLAGSTGLAVMVVILSTGHISGAHLNPAVTIAFAALKHFPWKHV  152 (218)
Q Consensus        74 ~~~~~aEfiGTf~lvf~~~~~~~~~~~~-~~~~~~~~~al~~Gl~v~~~i~~~g~iSGahlNPAvTla~~l~g~~~~~~~  152 (218)
                      +|++++||+||++|+|+++++....++. +...+.+.+++++|+++++.+++++++||+|+|||||+++++.|+++|.++
T Consensus         2 ~~~~laEfigT~~lv~~g~~~~~~~~~~~~~~~~~~~ial~~Gl~v~~~i~~~g~iSG~h~NPAvtl~~~~~~~i~~~~~   81 (231)
T PRK05420          2 FKKLAAEFFGTFWLVFGGCGSAVLAAAFPELGIGFLGVALAFGLTVLTMAYAVGHISGGHFNPAVSVGLWAGGRFPAKEL   81 (231)
T ss_pred             hHHHHHHHHHHHHHHHHHhhHHHhhcccCCCCCchHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHhCCCCHHHh
Confidence            6899999999999999999865432221 112246778999999999999999999999999999999999999999999


Q ss_pred             hhhhhhhhhhHHHHHHHHHHHhcCcc--C--C--c------cccC-CccHHHHHHHHHHHHHHHHHHHHHhhcCCCC
Q 027840          153 PVYIGAQIMASLCAAFALKGIFHPIM--G--G--G------VTVP-SAGYGEAFALEFIISFNLMFVVTAVATDTRA  216 (218)
Q Consensus       153 ~~yiiaQ~lGa~~ga~l~~~~~~~~~--~--~--~------~t~p-~~s~~~~f~~E~i~Tf~L~~~il~va~d~r~  216 (218)
                      +.||++|++|+++|+.+++.++....  .  +  .      .+.| ..+..++|+.|+++||+|++++++. +|+|+
T Consensus        82 ~~Y~~aQ~lGa~~ga~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~v~T~iLv~~i~~~-~~~~~  157 (231)
T PRK05420         82 VPYIIAQVVGGIAAAAVLYLIASGKAGFDLAGSGFASNGYGEHSPGGYSLLAALVCEVVLTAFFLLVILGA-TDKRA  157 (231)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhCCccccccccccccccccccCCCCcccHHHHHHHHHHHHHHHHHHHHHH-hCCCC
Confidence            99999999999999999888775321  0  0  0      1234 3478999999999999999999987 56654

>PLN00167 aquaporin TIP5; Provisional

Probab=99.95  E-value=6.5e-27  Score=204.29  Aligned_cols=149  Identities=26%  Similarity=0.299  Sum_probs=121.6

Q ss_pred             CCCChhHHHHHHHHHHHHHHHHHHHHhhhhhccc--c---CCCchhHHHHHHHHHHHHHHHHhhCCCCccccchHhhHHH
Q 027840           67 PPPPVSLARKVGAEFVGTLILIFAGTATAIVNQK--T---QGSETLIGLAGSTGLAVMVVILSTGHISGAHLNPAVTIAF  141 (218)
Q Consensus        67 ~~~~~~l~~~~~aEfiGTf~lvf~~~~~~~~~~~--~---~~~~~~~~~al~~Gl~v~~~i~~~g~iSGahlNPAvTla~  141 (218)
                      +....+++|++++||+|||+|+|+++++....+.  .   ....+++.++++||+++++.+++++++||+|+|||||+++
T Consensus        15 ~~~~~~~~~~~laEflgTf~lv~~~~g~~~~~~~~~~~~~~~~~~~~~i~l~~Gl~v~~~i~~~g~iSGah~NPAvtl~~   94 (256)
T PLN00167         15 QSVTRNALRSYLAEFISTFFFVFAAVGSAMSSRKLMPDAASDPSSLLIVAIANAFALSSAVYIAANISGGHVNPAVTFGM   94 (256)
T ss_pred             hhccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccCCCCcchHHHHHHHHHHHHHHHHhhcccccccCHHHHHHH
Confidence            3345678999999999999999999986553221  1   1123477899999999999999999999999999999999


Q ss_pred             HHhcCCCcCcchhhhhhhhhhHHHHHHHHHHHhcCccCCccc-cCCccHHHHHHHHHHHHHHHHHHHHHhhcCCCC
Q 027840          142 AALKHFPWKHVPVYIGAQIMASLCAAFALKGIFHPIMGGGVT-VPSAGYGEAFALEFIISFNLMFVVTAVATDTRA  216 (218)
Q Consensus       142 ~l~g~~~~~~~~~yiiaQ~lGa~~ga~l~~~~~~~~~~~~~t-~p~~s~~~~f~~E~i~Tf~L~~~il~va~d~r~  216 (218)
                      ++.++++|.++|.|+++|++|+++|+++++.++......... .++.+.+++++.|+++|++|+++++++ +|+|+
T Consensus        95 ~~~g~~~~~~~~~yi~aQ~lGa~~ga~~~~~~~~~~~~~~~~~~~~~s~~~~~~~E~i~T~~L~~~i~~~-~~~~~  169 (256)
T PLN00167         95 AVGGHISVPTAMFYWISQMLASVMACLFLKVTTVGQHVPTYKIAEEMTGFGASVLEGVLTFGLVYTVYAA-GDPRR  169 (256)
T ss_pred             HHhCCCcHhhhhHHHHHHHHHHHHHHHHHHHhhccccccccccCcccchHHHHHHHHHHHHHHHHHHHHh-ccccc
Confidence            999999999999999999999999999998886543211111 134577899999999999999999987 45543

>PLN00027 aquaporin TIP; Provisional

Probab=99.95  E-value=7.5e-27  Score=203.49  Aligned_cols=146  Identities=27%  Similarity=0.351  Sum_probs=122.2

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHhhhhhc----cccC-CCchhHHHHHHHHHHHHHHHHhhCCCCccccchHhhHHHHHhc
Q 027840           71 VSLARKVGAEFVGTLILIFAGTATAIVN----QKTQ-GSETLIGLAGSTGLAVMVVILSTGHISGAHLNPAVTIAFAALK  145 (218)
Q Consensus        71 ~~l~~~~~aEfiGTf~lvf~~~~~~~~~----~~~~-~~~~~~~~al~~Gl~v~~~i~~~g~iSGahlNPAvTla~~l~g  145 (218)
                      .+.+|++++||+||++|+|+++++....    .+.+ ...+.+.+++++|+++++.+++++++||+|+|||||+++++.+
T Consensus        17 ~~~~~~~~aEfigTf~lv~~g~g~~~~~~~~~~~~~~~~~~~l~~~l~~Gl~v~~~i~~~~~iSGah~NPAvtl~~~~~g   96 (252)
T PLN00027         17 PDALKAALAEFISTLIFVFAGEGSGMAFNKLTDNGSTTPAGLVAAALAHAFALFVAVSVGANISGGHVNPAVTFGAFIGG   96 (252)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCcchHHHHHHHHHHHHHHHHHHcccCccccChHHHHHHHHhC
Confidence            4568999999999999999999864321    1111 1224667899999999999999999999999999999999999


Q ss_pred             CCCcCcchhhhhhhhhhHHHHHHHHHHHhcCccCC-ccccCCccHHHHHHHHHHHHHHHHHHHHHhhcCCCC
Q 027840          146 HFPWKHVPVYIGAQIMASLCAAFALKGIFHPIMGG-GVTVPSAGYGEAFALEFIISFNLMFVVTAVATDTRA  216 (218)
Q Consensus       146 ~~~~~~~~~yiiaQ~lGa~~ga~l~~~~~~~~~~~-~~t~p~~s~~~~f~~E~i~Tf~L~~~il~va~d~r~  216 (218)
                      +++|.+.|+|+++|++|+++|+++++.++.....+ ..+.|+.+.+++|+.|+++||+|++++++++.|+|+
T Consensus        97 ~~~~~~~~~yi~aQ~lGa~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~i~Tf~Lv~~i~~~~~~~~~  168 (252)
T PLN00027         97 NITLLRGILYWIAQLLGSVVACLLLKFSTGGLETSAFSLSSGVGVWNAFVFEIVMTFGLVYTVYATAVDPKK  168 (252)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccCCCCccHHHHHHHHHHHHHHHHHHHHHhcccccc
Confidence            99999999999999999999999998776543222 224467889999999999999999999998777764

>PLN00166 aquaporin TIP2; Provisional

Probab=99.95  E-value=7.6e-27  Score=203.26  Aligned_cols=147  Identities=27%  Similarity=0.360  Sum_probs=122.2

Q ss_pred             ChhHHHHHHHHHHHHHHHHHHHHhhhhhc-c-cc-C--CCchhHHHHHHHHHHHHHHHHhhCCCCccccchHhhHHHHHh
Q 027840           70 PVSLARKVGAEFVGTLILIFAGTATAIVN-Q-KT-Q--GSETLIGLAGSTGLAVMVVILSTGHISGAHLNPAVTIAFAAL  144 (218)
Q Consensus        70 ~~~l~~~~~aEfiGTf~lvf~~~~~~~~~-~-~~-~--~~~~~~~~al~~Gl~v~~~i~~~g~iSGahlNPAvTla~~l~  144 (218)
                      +.+.+|++++||+||++|+|+++++.... . .. +  ...+++.+++++|+++++.+++++++||+|+|||||+++++.
T Consensus        14 ~~~~~~~~~aEfigTf~lv~~g~g~~~~~~~~~~~~~~~~~~~~~ial~~Gl~v~~~i~~~g~iSGah~NPAvt~~~~l~   93 (250)
T PLN00166         14 SVASLKAYLSEFIATLLFVFAGVGSAIAFAKLTSDAALDPAGLVAVAVAHAFALFVGVSIAANISGGHLNPAVTLGLAIG   93 (250)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccccccCCCCccHHHHHHHHHHHHHHHHHHhcccccccCHHHHHHHHHh
Confidence            35668999999999999999999865431 1 11 1  123466788999999999999999999999999999999999


Q ss_pred             cCCCcCcchhhhhhhhhhHHHHHHHHHHHhcCccCC-ccccCCccHHHHHHHHHHHHHHHHHHHHHhhcCCCC
Q 027840          145 KHFPWKHVPVYIGAQIMASLCAAFALKGIFHPIMGG-GVTVPSAGYGEAFALEFIISFNLMFVVTAVATDTRA  216 (218)
Q Consensus       145 g~~~~~~~~~yiiaQ~lGa~~ga~l~~~~~~~~~~~-~~t~p~~s~~~~f~~E~i~Tf~L~~~il~va~d~r~  216 (218)
                      ++++|.++|+||++|++|+++|+.+++.++...... ....++.+..++|+.|+++||+|++++++++.|+|+
T Consensus        94 g~~~~~~~~~y~~aq~lGa~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~v~Tf~Lv~~i~~~~~~~~~  166 (250)
T PLN00166         94 GNITIITGFFYWIAQCLGSIVACLLLVFVTNGESVPTHGVAAGLGAIEGVVMEIVVTFALVYTVYATAADPKK  166 (250)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcccccCCCCcHHHHHHHHHHHHHHHHHHHHHhcccccc
Confidence            999999999999999999999999999887642211 112346788999999999999999999998777664

>cd00333 MIP Major intrinsic protein (MIP) superfamily

Probab=99.93  E-value=2.2e-25  Score=191.23  Aligned_cols=141  Identities=38%  Similarity=0.589  Sum_probs=117.1

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhhhccccC-CCchhHHHHHHHHHHHHHHHHhhCCCCccccchHhhHHHHHhcCCCcCcch
Q 027840           75 RKVGAEFVGTLILIFAGTATAIVNQKTQ-GSETLIGLAGSTGLAVMVVILSTGHISGAHLNPAVTIAFAALKHFPWKHVP  153 (218)
Q Consensus        75 ~~~~aEfiGTf~lvf~~~~~~~~~~~~~-~~~~~~~~al~~Gl~v~~~i~~~g~iSGahlNPAvTla~~l~g~~~~~~~~  153 (218)
                      |++++||+||++++|.++++....+..+ ...+.+.++++||+.+++.+++++++||+|+|||+|+++++.++++|.+.+
T Consensus         1 r~~~~E~~gT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~v~~~~~~~~~~sga~~NPa~t~~~~~~~~~~~~~~~   80 (228)
T cd00333           1 RKYLAEFLGTFLLVFFGCGSVLAVKLAGGASGGLLGIALAWGFAIFVLVYAVGHISGGHINPAVTLALAVGGRFPLIRVI   80 (228)
T ss_pred             ChhhHHHHHHHHHHHHHhHHHhhccccCCCCCcHHHHHHHHHHHHHHHHHHhccCCCCeEcHHHHHHHHHhCCCCHHHHH
Confidence            5689999999999999998654433222 123456789999999999999999999999999999999999999999999


Q ss_pred             hhhhhhhhhHHHHHHHHHHHhcCccC----Cc-------cccC--CccHHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 027840          154 VYIGAQIMASLCAAFALKGIFHPIMG----GG-------VTVP--SAGYGEAFALEFIISFNLMFVVTAVATDTR  215 (218)
Q Consensus       154 ~yiiaQ~lGa~~ga~l~~~~~~~~~~----~~-------~t~p--~~s~~~~f~~E~i~Tf~L~~~il~va~d~r  215 (218)
                      +||++|++|+++|+.+++.++.+...    +.       .+.|  +.+.+++++.|+++|++|+++++++..+++
T Consensus        81 ~y~~aq~~Ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~v~T~~Lv~~i~~~~~~~~  155 (228)
T cd00333          81 PYIIAQLLGAILGAALLYGLYYGLYLEFLGANNIVAGIFGTYPSPGVSNGNAFFVEFIGTFILVLVVFATTDDPN  155 (228)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhHHHHhhcCCccccccceeccCCCCCccHHHHHHHHHHHHHHHHHHHHHHccccc
Confidence            99999999999999999988765321    11       1334  458999999999999999999999854443

Members of the MIP superfamily function as membrane channels that selectively transport water, small neutral molecules, and ions out of and between cells. The channel proteins share a common fold: the N-terminal cytosolic portion followed by six transmembrane helices, which might have arisen through gene duplication. On the basis of sequence similarity and functional characteristics, the superfamily can be subdivided into two major groups: water-selective channels called aquaporins (AQPs) and glycerol uptake facilitators (GlpFs). AQPs are found in all three kingdoms of life, while GlpFs have been characterized only within microorganisms.

>TIGR00861 MIP MIP family channel proteins

Probab=99.92  E-value=2.2e-24  Score=183.61  Aligned_cols=135  Identities=39%  Similarity=0.575  Sum_probs=112.3

Q ss_pred             HHHHHHHHHHHHHHhhhhhcccc---CCCc--hhHHHHHHHHHHHHHHHHhhCCCCccccchHhhHHHHHhcCCCcCcch
Q 027840           79 AEFVGTLILIFAGTATAIVNQKT---QGSE--TLIGLAGSTGLAVMVVILSTGHISGAHLNPAVTIAFAALKHFPWKHVP  153 (218)
Q Consensus        79 aEfiGTf~lvf~~~~~~~~~~~~---~~~~--~~~~~al~~Gl~v~~~i~~~g~iSGahlNPAvTla~~l~g~~~~~~~~  153 (218)
                      +||+||++|+|+++++....+..   +...  +...++++||+.+++.+++++++||+|+|||||+++++.++++|.+.+
T Consensus         1 aEf~gT~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~Gl~v~~~~~~~~~~sg~h~NPavt~~~~l~~~~~~~~~~   80 (216)
T TIGR00861         1 AEFLGTFLLVFFGVGSALGVNVAGAYGAVGGGQFLGVALAFGLAVATLVYCVGGISGAHLNPAVTIALLLGRRFPLKRVP   80 (216)
T ss_pred             CcHHHHHHHHHHHHHHHHhhhcccccCCCCCcchHHHHHHHHHHHHHHHHHHhcccccccCHHHHHHHHHhCCCCHHHHH
Confidence            59999999999999865432111   1111  467789999999999999999999999999999999999999999999


Q ss_pred             hhhhhhhhhHHHHHHHHHHHhcCccCC---ccc--cCCccHHHHHHHHHHHHHHHHHHHHHhhcC
Q 027840          154 VYIGAQIMASLCAAFALKGIFHPIMGG---GVT--VPSAGYGEAFALEFIISFNLMFVVTAVATD  213 (218)
Q Consensus       154 ~yiiaQ~lGa~~ga~l~~~~~~~~~~~---~~t--~p~~s~~~~f~~E~i~Tf~L~~~il~va~d  213 (218)
                      +|+++|++|+++|+++++.++.+....   ...  .++.+.+++++.|+++|++|+++++....+
T Consensus        81 ~y~~aQ~~Ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~i~T~~lv~~~~~~~~~  145 (216)
T TIGR00861        81 VYIVAQLIGAILGAALLYGLTSGLFPGNLAVNGSGAAGVSSGQAFFVEFIGTAILVLVIFATTDP  145 (216)
T ss_pred             HHHHHHHHHHHHHHHHHHHHccccccCCccccCCCCCcccHHHHHHHHHHHHHHHHHHHheeecC
Confidence            999999999999999999888764321   111  135689999999999999999999997543

processes. Some members of the family, including the yeast FPS protein (TC #1.A.8.5.1) and tobacco NtTIPA may transport both water and small solutes.

>cd00333 MIP Major intrinsic protein (MIP) superfamily

Probab=99.75  E-value=4.4e-18  Score=145.98  Aligned_cols=104  Identities=27%  Similarity=0.330  Sum_probs=88.5

Q ss_pred             CCCCChhHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCchhHHHHHHHHHHHHHHHHhhCCCCccccchHhhHHHHHhc
Q 027840           66 LPPPPVSLARKVGAEFVGTLILIFAGTATAIVNQKTQGSETLIGLAGSTGLAVMVVILSTGHISGAHLNPAVTIAFAALK  145 (218)
Q Consensus        66 ~~~~~~~l~~~~~aEfiGTf~lvf~~~~~~~~~~~~~~~~~~~~~al~~Gl~v~~~i~~~g~iSGahlNPAvTla~~l~g  145 (218)
                      .+.++.+.++++++|+++|++|++.+++.....++.   ......++.+|+.+.+++++.+++||+|+|||||+++++.+
T Consensus       122 ~~~~~~~~~~~~~~E~v~T~~Lv~~i~~~~~~~~~~---~~~~~~~~~iGl~v~~~~~~~g~~sG~~~NPAr~~g~~i~~  198 (228)
T cd00333         122 YPSPGVSNGNAFFVEFIGTFILVLVVFATTDDPNGP---PPGGLAPLAIGLLVAAIGLAGGPITGASMNPARSLGPALFT  198 (228)
T ss_pred             CCCCCccHHHHHHHHHHHHHHHHHHHHHHccccccC---CCCCcHHHHHHHHHHHHHHHhhcccccccCHhhchHHHHHh
Confidence            345667889999999999999999999865432221   11224578899999999999999999999999999999999


Q ss_pred             CC--CcCcchhhhhhhhhhHHHHHHHHHH
Q 027840          146 HF--PWKHVPVYIGAQIMASLCAAFALKG  172 (218)
Q Consensus       146 ~~--~~~~~~~yiiaQ~lGa~~ga~l~~~  172 (218)
                      +.  +|.+.|+||++|++|+++|+++++.
T Consensus       199 ~~~~~~~~~~vy~vap~lGai~aa~l~~~  227 (228)
T cd00333         199 GLARHWHYFWVYWVGPLIGAIAGALVYDY  227 (228)
T ss_pred             ccccccceeehhhhHHHHHHHHHHHHHHh
Confidence            87  7999999999999999999999875

Members of the MIP superfamily function as membrane channels that selectively transport water, small neutral molecules, and ions out of and between cells. The channel proteins share a common fold: the N-terminal cytosolic portion followed by six transmembrane helices, which might have arisen through gene duplication. On the basis of sequence similarity and functional characteristics, the superfamily can be subdivided into two major groups: water-selective channels called aquaporins (AQPs) and glycerol uptake facilitators (GlpFs). AQPs are found in all three kingdoms of life, while GlpFs have been characterized only within microorganisms.

>PLN00182 putative aquaporin NIP4; Provisional

Probab=99.75  E-value=6.6e-18  Score=149.52  Aligned_cols=103  Identities=22%  Similarity=0.325  Sum_probs=86.5

Q ss_pred             CCCChhHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCchhHHHHHHHHHHHHHHHHhhCCCCccccchHhhHHHHHhcC
Q 027840           67 PPPPVSLARKVGAEFVGTLILIFAGTATAIVNQKTQGSETLIGLAGSTGLAVMVVILSTGHISGAHLNPAVTIAFAALKH  146 (218)
Q Consensus        67 ~~~~~~l~~~~~aEfiGTf~lvf~~~~~~~~~~~~~~~~~~~~~al~~Gl~v~~~i~~~g~iSGahlNPAvTla~~l~g~  146 (218)
                      +.+..+.++++++|+++|++|++++++....++. .  ..  ..++++|+++++.+++.+++||+|+|||||+++++.++
T Consensus       152 ~~p~~s~~~a~~~E~l~TfiLv~~i~~~~~~~~~-~--~~--~~~l~iGl~V~~~~~~~g~~SGa~lNPARt~gpal~~~  226 (283)
T PLN00182        152 TTPTDSSGQALVAEIIISFLLMFVISGVATDSRA-V--GE--LAGIAVGMTIILNVFVAGPISGASMNPARSLGPAIVMG  226 (283)
T ss_pred             CCCCcchHHHHHHHHHHHHHHHHHHHhheecccc-C--Cc--chhHHHHHHHHHHHHHccccCccccChHHHHHHHHHhc
Confidence            3455678999999999999999999875332221 1  11  25788999999999999999999999999999999855


Q ss_pred             CCcCcchhhhhhhhhhHHHHHHHHHHHhc
Q 027840          147 FPWKHVPVYIGAQIMASLCAAFALKGIFH  175 (218)
Q Consensus       147 ~~~~~~~~yiiaQ~lGa~~ga~l~~~~~~  175 (218)
                       .|.++|+||++|++|+++|+++++.+..
T Consensus       227 -~~~~~wvY~vap~lGA~lgally~~l~~  254 (283)
T PLN00182        227 -RYKGIWVYIVGPFVGIIAGGFVYNLIRF  254 (283)
T ss_pred             -cccceeHHHHHHHHHHHHHHHHHHHHhc
Confidence             4899999999999999999999998874

>PLN00026 aquaporin NIP; Provisional

Probab=99.73  E-value=1.1e-17  Score=148.93  Aligned_cols=103  Identities=26%  Similarity=0.331  Sum_probs=86.0

Q ss_pred             CChhHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCchhHHHHHHHHHHHHHHHHhhCCCCccccchHhhHHHHHhcCCC
Q 027840           69 PPVSLARKVGAEFVGTLILIFAGTATAIVNQKTQGSETLIGLAGSTGLAVMVVILSTGHISGAHLNPAVTIAFAALKHFP  148 (218)
Q Consensus        69 ~~~~l~~~~~aEfiGTf~lvf~~~~~~~~~~~~~~~~~~~~~al~~Gl~v~~~i~~~g~iSGahlNPAvTla~~l~g~~~  148 (218)
                      +..+.+++++.||++|++|++++++.....+ ..+  .  ..++++|+++++.+++.+++||+|+|||||+++++..+ +
T Consensus       182 p~~s~~~a~~~Efi~TfiLv~vi~~v~~~~~-~~~--~--~~~l~iGl~V~~~~l~~g~~TGa~mNPARtlgPal~~~-~  255 (298)
T PLN00026        182 PSVSTGQAFALEFIITFNLLFVVTAVATDTR-AVG--E--LAGIAVGATVMLNILVAGPSTGGSMNPVRTLGPAVAAG-N  255 (298)
T ss_pred             ecccHHHHHHHHHHHHHHHHHhheeeecCCC-CcC--C--ccchHHHHHHHHHHHHhcccCccccChHHHHHHHHhcC-C
Confidence            3557789999999999999999986432211 111  1  24588999999999999999999999999999999876 7


Q ss_pred             cCcchhhhhhhhhhHHHHHHHHHHHhcCc
Q 027840          149 WKHVPVYIGAQIMASLCAAFALKGIFHPI  177 (218)
Q Consensus       149 ~~~~~~yiiaQ~lGa~~ga~l~~~~~~~~  177 (218)
                      |.++|+||++|++|+++|+++|+.+..+.
T Consensus       256 ~~~~wVy~vaPilGAilga~ly~~~~~~~  284 (298)
T PLN00026        256 YRAIWIYLVAPTLGALAGAGTYTAVKLRE  284 (298)
T ss_pred             chheeHHHHHHHHHHHHHHHHHHHHhCcc
Confidence            99999999999999999999998875543

>PLN00183 putative aquaporin NIP7; Provisional

Probab=99.71  E-value=3.4e-17  Score=144.43  Aligned_cols=106  Identities=23%  Similarity=0.343  Sum_probs=88.5

Q ss_pred             CCChhHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCchhHHHHHHHHHHHHHHHHhhCCCCccccchHhhHHHHHhcCC
Q 027840           68 PPPVSLARKVGAEFVGTLILIFAGTATAIVNQKTQGSETLIGLAGSTGLAVMVVILSTGHISGAHLNPAVTIAFAALKHF  147 (218)
Q Consensus        68 ~~~~~l~~~~~aEfiGTf~lvf~~~~~~~~~~~~~~~~~~~~~al~~Gl~v~~~i~~~g~iSGahlNPAvTla~~l~g~~  147 (218)
                      .+..+.++++++|+++|++|++.+++.....++. .   . ..++.+|+.+++.++..+++||+|+|||||+++++.+ .
T Consensus       155 ~p~~~~~~~~~~E~v~T~iLv~~i~~~~~~~~~~-~---~-~~~l~iGl~v~~~v~~~g~~TG~~~NPArtlgpai~~-~  228 (274)
T PLN00183        155 KPAQGCSSAFWVEFIATFIVMFLAASLTSQPQSL-G---H-LSGFVIGIAIGLAVLITGPVSGGSMNPARSLGPAIVS-W  228 (274)
T ss_pred             CCcccHHHHHHHHHHHHHHHHHhhheeeccccCC-C---C-ceehHHHHHHHHHHHhccCCCCCEeCHHHHHHHHHhC-C
Confidence            3445678999999999999999998754322211 1   1 1357899999999999999999999999999999986 5


Q ss_pred             CcCcchhhhhhhhhhHHHHHHHHHHHhcCccC
Q 027840          148 PWKHVPVYIGAQIMASLCAAFALKGIFHPIMG  179 (218)
Q Consensus       148 ~~~~~~~yiiaQ~lGa~~ga~l~~~~~~~~~~  179 (218)
                      +|.++|+||++|++|+++|+++++.++.+...
T Consensus       229 ~~~~~wvy~vapilGailaa~l~~~l~~~~~~  260 (274)
T PLN00183        229 DFKDIWIYITAPTIGAVAGALMFHLLRLRTQP  260 (274)
T ss_pred             ChhheehHHHHHHHHHHHHHHHHHHHhccCCC
Confidence            79999999999999999999999999876543

>TIGR00861 MIP MIP family channel proteins

Probab=99.70  E-value=6.5e-17  Score=137.72  Aligned_cols=100  Identities=26%  Similarity=0.305  Sum_probs=83.7

Q ss_pred             CCChhHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCchhHHHHHHHHHHHHHHHHhhCCCCccccchHhhHHHHHhc-C
Q 027840           68 PPPVSLARKVGAEFVGTLILIFAGTATAIVNQKTQGSETLIGLAGSTGLAVMVVILSTGHISGAHLNPAVTIAFAALK-H  146 (218)
Q Consensus        68 ~~~~~l~~~~~aEfiGTf~lvf~~~~~~~~~~~~~~~~~~~~~al~~Gl~v~~~i~~~g~iSGahlNPAvTla~~l~g-~  146 (218)
                      .++.+.++.++.|+++|++|++.++.....+++....   ...++.+|+.+++.++..+.+||+|+|||||+++++.+ .
T Consensus       116 ~~~~~~~~~~~~E~i~T~~lv~~~~~~~~~~~~~~~~---~~~~~~iG~~v~~~~~~~g~~sG~~~NPAr~l~~~l~~~~  192 (216)
T TIGR00861       116 AAGVSSGQAFFVEFIGTAILVLVIFATTDPRNRVPRG---GFAPLAIGLLVFLIHLSMGPYTGTGMNPARSLGPALFAGL  192 (216)
T ss_pred             CCcccHHHHHHHHHHHHHHHHHHHheeecCCCCCCCC---ccHHHHHHHHHHHHHHhCCCCcccccCchhhhhHHHHhcc
Confidence            3456889999999999999999999765432221111   13678899999999999999999999999999999986 5


Q ss_pred             CCcCcchhhhhhhhhhHHHHHHHH
Q 027840          147 FPWKHVPVYIGAQIMASLCAAFAL  170 (218)
Q Consensus       147 ~~~~~~~~yiiaQ~lGa~~ga~l~  170 (218)
                      .+|.+.|+||++|++|+++|+.+|
T Consensus       193 ~~~~~~~vy~vap~~Ga~~a~~~y  216 (216)
T TIGR00861       193 AGWGNHWVYWVGPIIGAILGALVY  216 (216)
T ss_pred             ccccceeHHHHHHHHHHHHHHHhC
Confidence            789999999999999999998764

processes. Some members of the family, including the yeast FPS protein (TC #1.A.8.5.1) and tobacco NtTIPA may transport both water and small solutes.

>KOG0223 consensus Aquaporin (major intrinsic protein family) [Carbohydrate transport and metabolism]

Probab=99.69  E-value=3.1e-17  Score=141.81  Aligned_cols=107  Identities=25%  Similarity=0.328  Sum_probs=92.3

Q ss_pred             ccCCCCChhHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCchhHHHHHHHHHHHHHHHHhhCCCCccccchHhhHHHHH
Q 027840           64 CSLPPPPVSLARKVGAEFVGTLILIFAGTATAIVNQKTQGSETLIGLAGSTGLAVMVVILSTGHISGAHLNPAVTIAFAA  143 (218)
Q Consensus        64 ~~~~~~~~~l~~~~~aEfiGTf~lvf~~~~~~~~~~~~~~~~~~~~~al~~Gl~v~~~i~~~g~iSGahlNPAvTla~~l  143 (218)
                      ...+.++.+.+|.++.|++.||.|+|..++.+...++.      ...++.+|+++.+.++..+++||++|||||++++++
T Consensus       122 ~~~~~~~~~~~q~~~~E~ilTf~Lv~~v~~~a~d~~~~------~~a~l~IG~~v~~~~l~~g~~TG~sMNPArSfGpAv  195 (238)
T KOG0223|consen  122 LTGLAPGLSTGQGLVIEIILTFILVFTVFATATDPRRS------ELAPLAIGFSVGLNILAAGPFTGASMNPARSFGPAV  195 (238)
T ss_pred             eeccCCCCCcchhHHHHHHHHHHHhheeEEEeecCCCc------ccHHHHHHHHHHHHHHeecCcCcCccCcHHHhhHHH
Confidence            34456778889999999999999999999833222221      345788999999999999999999999999999999


Q ss_pred             hcCCCcCcchhhhhhhhhhHHHHHHHHHHHhcCc
Q 027840          144 LKHFPWKHVPVYIGAQIMASLCAAFALKGIFHPI  177 (218)
Q Consensus       144 ~g~~~~~~~~~yiiaQ~lGa~~ga~l~~~~~~~~  177 (218)
                      ..+. |.++|+||++|++|+++++++|+.++.+.
T Consensus       196 v~~~-w~~hwiYwvgP~~Ga~~a~~~y~~v~~~~  228 (238)
T KOG0223|consen  196 VYGS-WDDHWIYWVGPLLGAILAALIYRLVFIPD  228 (238)
T ss_pred             HhcC-CCcEEEEEhhHHHHHHHHHHHHHHhccCc
Confidence            9776 99999999999999999999999998765

>PLN00184 aquaporin NIP1; Provisional

Probab=99.66  E-value=5.3e-16  Score=138.21  Aligned_cols=103  Identities=22%  Similarity=0.266  Sum_probs=86.0

Q ss_pred             CChhHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCchhHHHHHHHHHHHHHHHHhhCCCCccccchHhhHHHHHhcCCC
Q 027840           69 PPVSLARKVGAEFVGTLILIFAGTATAIVNQKTQGSETLIGLAGSTGLAVMVVILSTGHISGAHLNPAVTIAFAALKHFP  148 (218)
Q Consensus        69 ~~~~l~~~~~aEfiGTf~lvf~~~~~~~~~~~~~~~~~~~~~al~~Gl~v~~~i~~~g~iSGahlNPAvTla~~l~g~~~  148 (218)
                      +..+.+++++.|+++|++|++++++....++.. +  .  ..++.+|+.+++.+++.+++||+++|||||+++++... .
T Consensus       173 p~~s~~~af~~E~i~TfvLv~~il~~~~~~~~~-~--~--~~~l~IG~~v~~~~~~~g~~TG~smNPAR~~GPal~~~-~  246 (296)
T PLN00184        173 PVGSDLQAFVMEFIVTFYLMFIISGVATDNRAI-G--E--LAGLAIGSTVLLNVLIAAPVSSASMNPGRSLGPAMVYG-C  246 (296)
T ss_pred             cCCcHHHHHHHHHHHHHHHHHHHHheeccCcCC-C--c--chHHHHHHHHHHHHHHhcccCccccCchhhHHHHHHhh-c
Confidence            345789999999999999999999754322211 1  1  24688999999999999999999999999999999754 4


Q ss_pred             cCcchhhhhhhhhhHHHHHHHHHHHhcCc
Q 027840          149 WKHVPVYIGAQIMASLCAAFALKGIFHPI  177 (218)
Q Consensus       149 ~~~~~~yiiaQ~lGa~~ga~l~~~~~~~~  177 (218)
                      |.++|+||++|++|+++|+++|+.++..+
T Consensus       247 ~~~~WVy~vgPilGa~laal~y~~l~~~~  275 (296)
T PLN00184        247 YKGIWIYIVAPTLGAIAGAWVYNTVRYTD  275 (296)
T ss_pred             ccccchHHhHHHHHHHHHHHHHHHHhcCC
Confidence            78999999999999999999999887543

>PLN00027 aquaporin TIP; Provisional

Probab=99.62  E-value=3.4e-15  Score=130.31  Aligned_cols=108  Identities=26%  Similarity=0.248  Sum_probs=88.7

Q ss_pred             cCCCCChhHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCchhHHHHHHHHHHHHHHHHhhCCCCccccchHhhHHHHHh
Q 027840           65 SLPPPPVSLARKVGAEFVGTLILIFAGTATAIVNQKTQGSETLIGLAGSTGLAVMVVILSTGHISGAHLNPAVTIAFAAL  144 (218)
Q Consensus        65 ~~~~~~~~l~~~~~aEfiGTf~lvf~~~~~~~~~~~~~~~~~~~~~al~~Gl~v~~~i~~~g~iSGahlNPAvTla~~l~  144 (218)
                      ....+..+.++.++.|+++||+|++.+++.....++. ..  ....++.+|+.++.+++..+..||+.+||||++++++.
T Consensus       133 ~~~~~~~~~~~~~~~E~i~Tf~Lv~~i~~~~~~~~~~-~~--~~~~p~~iGl~v~~~~~~~g~~TG~~~NPAR~~gPal~  209 (252)
T PLN00027        133 FSLSSGVGVWNAFVFEIVMTFGLVYTVYATAVDPKKG-DL--GIIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVV  209 (252)
T ss_pred             ccCCCCccHHHHHHHHHHHHHHHHHHHHHhccccccC-Cc--cchHHHHHHHHHHHHHHhcccccccccCcchhHHHHHH
Confidence            3345677889999999999999999998753222211 11  12356889999999999999999999999999999998


Q ss_pred             cCCCcCcchhhhhhhhhhHHHHHHHHHHHhcC
Q 027840          145 KHFPWKHVPVYIGAQIMASLCAAFALKGIFHP  176 (218)
Q Consensus       145 g~~~~~~~~~yiiaQ~lGa~~ga~l~~~~~~~  176 (218)
                      .. .|.++|+||++|++|+++|+++|+.++.+
T Consensus       210 ~~-~~~~~wvy~vgP~~Ga~laa~~y~~l~~~  240 (252)
T PLN00027        210 SW-TWTNHWVYWAGPLIGGGIAGLVYELIFIG  240 (252)
T ss_pred             hh-cchhhhHHHHHHHHHHHHHHHHHHHHhcC
Confidence            65 58999999999999999999999998754

>PTZ00016 aquaglyceroporin; Provisional

Probab=99.62  E-value=3e-15  Score=133.32  Aligned_cols=109  Identities=21%  Similarity=0.159  Sum_probs=87.7

Q ss_pred             cCCCCChhHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCchhHHHHHHHHHHHHHHHHhhCCCCccccchHhhHHHHHh
Q 027840           65 SLPPPPVSLARKVGAEFVGTLILIFAGTATAIVNQKTQGSETLIGLAGSTGLAVMVVILSTGHISGAHLNPAVTIAFAAL  144 (218)
Q Consensus        65 ~~~~~~~~l~~~~~aEfiGTf~lvf~~~~~~~~~~~~~~~~~~~~~al~~Gl~v~~~i~~~g~iSGahlNPAvTla~~l~  144 (218)
                      ..+.|+.+..+.++.|+++|++|++++++..+.++...  .+  ..++.+|+.+.++.++.+..||+.+||||++++++.
T Consensus       175 f~t~p~~s~~~a~~~E~i~T~iLv~~ila~~d~~~~~~--~~--~~pl~IGl~v~~i~~~~g~~TG~smNPAR~fGPal~  250 (294)
T PTZ00016        175 FATYPREGNFYAIFSELILTAILLLVILAITDPNNCPA--FN--YLPVAVGLLVFVIGISFGGNTGYALNPARDLGPRLF  250 (294)
T ss_pred             eeCCCCccHHHHHHHHHHHHHHHHHHHHHhccCccCCC--cC--cccHHHHHHHHHHHHhccCCCCCcccchhhHHHHHH
Confidence            34455778899999999999999999998654332211  11  246779999999999999999999999999999997


Q ss_pred             c-----CCCcC----cchhhhhhhhhhHHHHHHHHHHHhcCc
Q 027840          145 K-----HFPWK----HVPVYIGAQIMASLCAAFALKGIFHPI  177 (218)
Q Consensus       145 g-----~~~~~----~~~~yiiaQ~lGa~~ga~l~~~~~~~~  177 (218)
                      .     +..|.    +.|+||++|++|+++|+++|+.+..+.
T Consensus       251 ~~~~~g~~~~~~~~~~~WVy~vgP~vGa~~aally~~ll~~~  292 (294)
T PTZ00016        251 SAILWGSEVFTKDNYYFWVPLVAPFVGAVLGMFLYDKFIPPL  292 (294)
T ss_pred             HHHhccccccCcCCceeeeeehHHHHHHHHHHHHHHHHhCCC
Confidence            3     22343    689999999999999999999887654

>PLN00166 aquaporin TIP2; Provisional

Probab=99.61  E-value=4.5e-15  Score=129.46  Aligned_cols=104  Identities=22%  Similarity=0.244  Sum_probs=86.0

Q ss_pred             CChhHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCchhHHHHHHHHHHHHHHHHhhCCCCccccchHhhHHHHHhcCCC
Q 027840           69 PPVSLARKVGAEFVGTLILIFAGTATAIVNQKTQGSETLIGLAGSTGLAVMVVILSTGHISGAHLNPAVTIAFAALKHFP  148 (218)
Q Consensus        69 ~~~~l~~~~~aEfiGTf~lvf~~~~~~~~~~~~~~~~~~~~~al~~Gl~v~~~i~~~g~iSGahlNPAvTla~~l~g~~~  148 (218)
                      ++.+..+.++.|+++|++|++..++.....++. ...  ...++.+|+.++++++..++.||+.+||||++++++..+ .
T Consensus       135 ~~~~~~~~~~~E~v~Tf~Lv~~i~~~~~~~~~~-~~~--~~~p~~iGl~v~~~~~~~~~~tG~~~NPAR~~gPal~~~-~  210 (250)
T PLN00166        135 AGLGAIEGVVMEIVVTFALVYTVYATAADPKKG-SLG--TIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVSG-D  210 (250)
T ss_pred             CCCcHHHHHHHHHHHHHHHHHHHHHhccccccc-ccc--cchhHHHHHHHHHHHHcccCCCCCccCchHhhHHHHhcC-C
Confidence            456779999999999999999999754322211 111  135688999999999999999999999999999999865 5


Q ss_pred             cCcchhhhhhhhhhHHHHHHHHHHHhcC
Q 027840          149 WKHVPVYIGAQIMASLCAAFALKGIFHP  176 (218)
Q Consensus       149 ~~~~~~yiiaQ~lGa~~ga~l~~~~~~~  176 (218)
                      |.+.|+||++|++|+++|+++++.++.+
T Consensus       211 ~~~~wvywvgPi~Ga~~aa~~y~~l~~~  238 (250)
T PLN00166        211 FSQIWIYWVGPLVGGALAGLIYGDVFIG  238 (250)
T ss_pred             CcccchhhHHHHHHHHHHHHHHHHHhcc
Confidence            8999999999999999999999887653

>COG0580 GlpF Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) [Carbohydrate transport and metabolism]

Probab=99.60  E-value=6.5e-15  Score=127.35  Aligned_cols=114  Identities=22%  Similarity=0.204  Sum_probs=89.3

Q ss_pred             CCCCcccccCCCCC-hhHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCchhHHHHHHHHHHHHHHHHhhCCCCccccch
Q 027840           57 GRLPSVSCSLPPPP-VSLARKVGAEFVGTLILIFAGTATAIVNQKTQGSETLIGLAGSTGLAVMVVILSTGHISGAHLNP  135 (218)
Q Consensus        57 ~~~~~~~~~~~~~~-~~l~~~~~aEfiGTf~lvf~~~~~~~~~~~~~~~~~~~~~al~~Gl~v~~~i~~~g~iSGahlNP  135 (218)
                      +.....+...+.|. +++++.++.|+++||+|++.+.+..+.++.   +.+  ..++.+|+.++.+.++.++.||..+||
T Consensus       118 ~~~~~~g~~~t~p~~~~~~~~fl~E~v~T~~L~~~Ila~~~~~~~---~~~--~apl~iGllv~~i~~s~g~~TG~aiNP  192 (241)
T COG0580         118 DPLASLGAFSTSPGGYSLGQAFLIEFVGTFVLVLGILALTDDGNA---NAG--FAPLAIGLLVTAIGLSLGPTTGTAINP  192 (241)
T ss_pred             CchhhccccccCCCcccHHHHHHHHHHHHHHHHHHHHHhhccCcc---ccc--chHHHHHHHHHHHHHHhcCCCCCccCh
Confidence            33445555666555 588999999999999999999985442222   111  357889999999999999999999999


Q ss_pred             HhhHHHHHhcC----C----CcCcchhhhhhhhhhHHHHHHHHHHHhc
Q 027840          136 AVTIAFAALKH----F----PWKHVPVYIGAQIMASLCAAFALKGIFH  175 (218)
Q Consensus       136 AvTla~~l~g~----~----~~~~~~~yiiaQ~lGa~~ga~l~~~~~~  175 (218)
                      |||+++++...    .    +.+++|+||++|++|+++|+++++.++.
T Consensus       193 ARdlGprl~~~~~g~~~~~g~~~y~wipvigpiiGa~lg~~~~~~~~~  240 (241)
T COG0580         193 ARDLGPRLAHSLAGWAANKGDSSYFWIPVIGPIVGAILGALLYKLLLG  240 (241)
T ss_pred             HHHHHHHHHHHhcCcccCCCCCCeEeeeehHHHHHHHHHHHHHHHHcc
Confidence            99999998321    1    1258999999999999999999987653

>PRK05420 aquaporin Z; Provisional

Probab=99.59  E-value=6.7e-15  Score=126.94  Aligned_cols=101  Identities=15%  Similarity=0.158  Sum_probs=84.9

Q ss_pred             ChhHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCchhHHHHHHHHHHHHHHHHhhCCCCccccchHhhHHHHHhc-CCC
Q 027840           70 PVSLARKVGAEFVGTLILIFAGTATAIVNQKTQGSETLIGLAGSTGLAVMVVILSTGHISGAHLNPAVTIAFAALK-HFP  148 (218)
Q Consensus        70 ~~~l~~~~~aEfiGTf~lvf~~~~~~~~~~~~~~~~~~~~~al~~Gl~v~~~i~~~g~iSGahlNPAvTla~~l~g-~~~  148 (218)
                      ..+..+.++.|+++|++|++..++..+.++  .  ..  ..++.+|+.+.+..+..++.||+.+|||||+++++.. ...
T Consensus       128 ~~~~~~~~~~E~v~T~iLv~~i~~~~~~~~--~--~~--~~p~~iGl~v~~~~~~~~~~TG~s~NPAR~~gpal~~g~~~  201 (231)
T PRK05420        128 GYSLLAALVCEVVLTAFFLLVILGATDKRA--P--AG--FAPIAIGLALTLIHLISIPVTNTSVNPARSTGVALFVGGWA  201 (231)
T ss_pred             cccHHHHHHHHHHHHHHHHHHHHHHhCCCC--C--Cc--chHHHHHHHHHHHHHHhhccCCCccCcHHHHHHHHHhCCCC
Confidence            357899999999999999999997654321  1  11  2568899999999999999999999999999999974 344


Q ss_pred             cCcchhhhhhhhhhHHHHHHHHHHHhcC
Q 027840          149 WKHVPVYIGAQIMASLCAAFALKGIFHP  176 (218)
Q Consensus       149 ~~~~~~yiiaQ~lGa~~ga~l~~~~~~~  176 (218)
                      |.++|+||++|++|+++++++|+.++++
T Consensus       202 ~~~~wvy~vgP~~Ga~laa~~y~~l~~~  229 (231)
T PRK05420        202 LEQLWLFWVAPIVGAIIGGLIYRLLLEK  229 (231)
T ss_pred             ccceEEeehHHHHHHHHHHHHHHHHhcc
Confidence            5689999999999999999999988765

>PLN00167 aquaporin TIP5; Provisional

Probab=99.55  E-value=2.6e-14  Score=125.09  Aligned_cols=104  Identities=19%  Similarity=0.180  Sum_probs=85.9

Q ss_pred             ChhHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCchhHHHHHHHHHHHHHHHHhhCCCCccccchHhhHHHHHhcCCCc
Q 027840           70 PVSLARKVGAEFVGTLILIFAGTATAIVNQKTQGSETLIGLAGSTGLAVMVVILSTGHISGAHLNPAVTIAFAALKHFPW  149 (218)
Q Consensus        70 ~~~l~~~~~aEfiGTf~lvf~~~~~~~~~~~~~~~~~~~~~al~~Gl~v~~~i~~~g~iSGahlNPAvTla~~l~g~~~~  149 (218)
                      ..+.++.++.|+++|++|++..++..+.++..  ..  ...++.+|+.++++.+..++.||+.+||||++++++... .|
T Consensus       140 ~~s~~~~~~~E~i~T~~L~~~i~~~~~~~~~~--~~--~~~pl~iGl~v~~~~~~~g~~TG~a~NPAR~~gPal~~~-~~  214 (256)
T PLN00167        140 EMTGFGASVLEGVLTFGLVYTVYAAGDPRRGL--LG--AIGPLAIGLVAGANVLAAGPFSGGSMNPACAFGSAVVAG-SF  214 (256)
T ss_pred             ccchHHHHHHHHHHHHHHHHHHHHhccccccC--CC--CcchHHHHHHHHHHHHhccCCCCcccCcccchHHHHhcc-Cc
Confidence            44668999999999999999988754322211  11  134678999999999999999999999999999999865 58


Q ss_pred             CcchhhhhhhhhhHHHHHHHHHHHhcCcc
Q 027840          150 KHVPVYIGAQIMASLCAAFALKGIFHPIM  178 (218)
Q Consensus       150 ~~~~~yiiaQ~lGa~~ga~l~~~~~~~~~  178 (218)
                      .+.|+||++|++|+++++++|+.++.+..
T Consensus       215 ~~~wvywvgP~~Ga~l~a~~y~~l~~~~~  243 (256)
T PLN00167        215 KNQAVYWVGPLLGGAVAGLLYDNVVFPTQ  243 (256)
T ss_pred             cCcEEEeHHHHHHHHHHHHHHHHHhCCCc
Confidence            89999999999999999999999887543

>PF00230 MIP: Major intrinsic protein; InterPro: IPR000425 A number of transmembrane (TM) channel proteins can be grouped together on the basis of sequence similarities [, , , , ]

Probab=99.54  E-value=2.4e-14  Score=122.15  Aligned_cols=104  Identities=30%  Similarity=0.402  Sum_probs=85.8

Q ss_pred             cccCCCCChhHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCchhHHHHHHHHHHHHHHHHhhCCCCccccchHhhHHHH
Q 027840           63 SCSLPPPPVSLARKVGAEFVGTLILIFAGTATAIVNQKTQGSETLIGLAGSTGLAVMVVILSTGHISGAHLNPAVTIAFA  142 (218)
Q Consensus        63 ~~~~~~~~~~l~~~~~aEfiGTf~lvf~~~~~~~~~~~~~~~~~~~~~al~~Gl~v~~~i~~~g~iSGahlNPAvTla~~  142 (218)
                      .+..+.++.+.++.++.|+++|++|++..+...+.+++... +.  ..++.+|+.+.+..+..+..||+.+||||+++++
T Consensus       124 ~~~~~~~~~s~~~~~~~E~~~t~il~~~i~~~~~~~~~~~~-~~--~~p~~ig~~v~~~~~~~~~~tG~~~NPAr~~g~~  200 (227)
T PF00230_consen  124 FATTPPPGISLGQAFFSEFIGTFILVLVILAVADDKRKFPL-GP--LAPLAIGLTVGALVLAGGPYTGASLNPARALGPA  200 (227)
T ss_dssp             TSCGSTTTSSHHHHHHHHHHHHHHHHHHHHHHTSTTSSSTS-SG--GHHHHHHHHHHHHHHHHHHHHST-SSHHHHHHHH
T ss_pred             ccccccccchhhhhhhhhhhhhhHHHhhhhhhccccccccc-cc--ccceeEEEEEeecccccccccccccCchhhcCce
Confidence            34456777899999999999999999999886544433321 11  2467889999999999999999999999999999


Q ss_pred             HhcCCCcCcchhhhhhhhhhHHHHHHHH
Q 027840          143 ALKHFPWKHVPVYIGAQIMASLCAAFAL  170 (218)
Q Consensus       143 l~g~~~~~~~~~yiiaQ~lGa~~ga~l~  170 (218)
                      +.... |.+.|+||++|++|+++|+++|
T Consensus       201 l~~~~-~~~~wvy~~~P~~Ga~~a~~~Y  227 (227)
T PF00230_consen  201 LFSGI-WDYFWVYWVGPFIGAILAALLY  227 (227)
T ss_dssp             HHHTH-HTTTTHHHHHHHHHHHHHHHHH
T ss_pred             eeccc-CCeEEEEEehHHHHHHHHHhhC
Confidence            98766 9999999999999999999876

These include: Mammalian major intrinsic protein (MIP). MIP is the major component of lens fibre gap junctions. Mammalian aquaporins []. These proteins form water- specific channels that provide the plasma membranes of red cells and kidney prox imal and collecting tubules with high permeability to water, thereby permitting water to move in the direction of an osmotic gradient. Soybean nodulin-26, a major component of the peribacteroid membrane induced during nodulation in legume roots after Rhizobium infection. Plants tonoplast intrinsic proteins (TIP). There are various isoforms of TIP : alpha (seed), gamma, Rt (root), and Wsi (water-stress induced). These proteins may allow the diffusion of water, amino acids and/or peptides from the tonoplas t interior to the cytoplasm. Bacterial glycerol facilitator protein (gene glpF), which facilitates the mo vement of glycerol across the cytoplasmic membrane. Salmonella typhimurium propanediol diffusion fac ilitator (gene pduF). Yeast FPS1, a glycerol uptake/efflux facilitator protein. Drosophila neurogenic protein 'big brain' (bib). This protein may mediate in tercellular communication; it may functions by allowing the transport of certain molecules(s) and thereby sending a signal for an exodermal cell to become an ep idermoblast instead of a neuroblast. Yeast hypothetical protein YFL054c. A hypothetical protein from the pepX region of Lactococcus lactis. The structures of various members of the MIP family have been determined by means of X-ray diffraction [, , ], revealing the fold to comprise a right-handed bundle of 6 transmembrane (TM) alpha-helices [, , ]. Similarities in the N-and C-terminal halves of the molecule suggest that the proteins may have arisen through tandem, intragenic duplication of an ancestral protein that contained 3 TM domains []. Some of the proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins []. Aquaporin-CHIP (Aquaporin 1) belongs to the Colton blood group system and is associated with Co(a/b) antigen.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3NE2_A 2C32_A 1YMG_A 2B6P_A 3C02_A 2B5F_D 3CN6_A 3CN5_A 1Z98_M 3CLL_A ....

>KOG0224 consensus Aquaporin (major intrinsic protein family) [Carbohydrate transport and metabolism]

Probab=99.15  E-value=3.8e-11  Score=106.09  Aligned_cols=111  Identities=18%  Similarity=0.162  Sum_probs=86.4

Q ss_pred             cccccC--CCCChhHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCchhHHHHHHHHHHHHHHHHhhCCCCccccchHhh
Q 027840           61 SVSCSL--PPPPVSLARKVGAEFVGTLILIFAGTATAIVNQKTQGSETLIGLAGSTGLAVMVVILSTGHISGAHLNPAVT  138 (218)
Q Consensus        61 ~~~~~~--~~~~~~l~~~~~aEfiGTf~lvf~~~~~~~~~~~~~~~~~~~~~al~~Gl~v~~~i~~~g~iSGahlNPAvT  138 (218)
                      +.+|+.  |.|..+++++++.||+||.+|+.+.++..+..+  .-.  ....++.+|+.++++..++|.-+|..+||||+
T Consensus       153 TAgiFaTyP~p~ls~~n~F~DqfigTa~L~~~l~aI~D~rN--~~p--~g~~p~~iG~lv~~Ig~s~G~N~GyaiNPARD  228 (316)
T KOG0224|consen  153 TAGIFATYPAPHLSLWNGFFDQFIGTAMLVLCLFAITDKRN--PIP--TGLHPLVIGILVVAIGMSLGYNTGYAINPARD  228 (316)
T ss_pred             ceEEEeecCchHhhhhHHHHHHHHHHHHHHhheeEEecCCC--CCC--cchhHHHHHHHHHHHHHHhhcccCcccCcccc
Confidence            444444  566789999999999999999998887544332  111  12357889999999999999999999999999


Q ss_pred             HHHHHhc--------CCC--cCcchhhhhhhhhhHHHHHHHHHHHhc
Q 027840          139 IAFAALK--------HFP--WKHVPVYIGAQIMASLCAAFALKGIFH  175 (218)
Q Consensus       139 la~~l~g--------~~~--~~~~~~yiiaQ~lGa~~ga~l~~~~~~  175 (218)
                      +++.+.-        -++  -...|+.|+++++|+++|+++|.....
T Consensus       229 lgPRlF~~~aGyG~~vF~~~~~~~WvPivgPl~Gai~G~~iY~~~Ig  275 (316)
T KOG0224|consen  229 LGPRLFTSIAGYGPEVFSAGHNWWWVPIVGPLIGAILGGWIYDFFIG  275 (316)
T ss_pred             cchHHHHHHHhcchhhcccCCceeeeeehhhhhhhhhhhhhheeeee
Confidence            9988851        111  135688999999999999999987654

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	218
3ne2_A	246	Archaeoglobus Fulgidus Aquaporin Length = 246		2e-10
2o9e_A	234	Crystal Structure Of Aqpz Mutant T183c Complexed Wi		3e-10
2o9d_A	234	Crystal Structure Of Aqpz Mutant T183c. Length = 23		3e-10
2o9f_A	234	Crystal Structure Of Aqpz Mutant L170c Length = 234		3e-10
3nkc_A	234	Crystal Structure Of Aqpz F43w,H174g,T183f Length =		4e-10
3nka_A	234	Crystal Structure Of Aqpz H174g,T183f Length = 234		4e-10
3c02_A	258	X-Ray Structure Of The Aquaglyceroporin From Plasmo		5e-10
1rc2_B	231	2.5 Angstrom Resolution X-Ray Structure Of Aquapori		5e-10
3nk5_A	234	Crystal Structure Of Aqpz Mutant F43w Length = 234		1e-09
2evu_A	246	Crystal Structure Of Aquaporin Aqpm At 2.3a Resolut		4e-09
2b6o_A	263	Electron Crystallographic Structure Of Lens Aquapor		2e-08
2b5f_A	303	Crystal Structure Of The Spinach Aquaporin Sopip2;1		3e-08
1sor_A	235	Aquaporin-0 Membrane Junctions Reveal The Structure		3e-08
1j4n_A	271	Crystal Structure Of The Aqp1 Water Channel Length		3e-08
3cn6_A	304	Crystal Structure Of The Spinach Aquaporin Sopip2;1		3e-08
3cn5_A	304	Crystal Structure Of The Spinach Aquaporin Sopip2;1		3e-08
1z98_A	281	Crystal Structure Of The Spinach Aquaporin Sopip2;1		3e-08
3m9i_A	220	Electron Crystallographic Structure Of Lens Aquapor		3e-08
3cll_A	300	Crystal Structure Of The Spinach Aquaporin Sopip2;1		3e-08
1ymg_A	263	The Channel Architecture Of Aquaporin O At 2.2 Angs		5e-08
2zz9_A	301	Structure Of Aquaporin-4 S180d Mutant At 2.8 A Reso		1e-07
3iyz_A	340	Structure Of Aquaporin-4 S180d Mutant At 10.0 A Res		1e-07
2d57_A	301	Double Layered 2d Crystal Structure Of Aquaporin-4		1e-07
1fx8_A	281	Crystal Structure Of The E. Coli Glycerol Facilitat		1e-07
1ldf_A	281	Crystal Structure Of The E. Coli Glycerol Facilitat		2e-07
3gd8_A	223	Crystal Structure Of Human Aquaporin 4 At 1.8 And I		7e-07
3d9s_A	266	Human Aquaporin 5 (Aqp5) - High Resolution X-Ray St		9e-07
1fqy_A	269	Structure Of Aquaporin-1 At 3.8 A Resolution By Ele		9e-07
3llq_A	256	Aquaporin Structure From Plant Pathogen Agrobacteri		2e-05

>pdb|3NE2|A Chain A, Archaeoglobus Fulgidus Aquaporin Length = 246

Iteration: 1
 Score = 62.4 bits (150), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 53/157 (33%), Positives = 73/157 (46%), Gaps = 27/157 (17%)
Query: 74  ARKVGAEFVGTLILIFAGTATAIV-----NQKTQGSET--------------LIGLAGST 114
           A++  AE VGT IL+F G   A++     N   + +E                IG+A + 
Sbjct: 6   AKRFTAEVVGTFILVFFGPGAAVITLMIANGADKPNEFNIGIGALGGLGDWFAIGMAFA- 64
Query: 115 GLAVMVVILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIF 174
            LA+  VI S G ISGAH+NPAVTIA  ++  FP + V  YI AQ + +   +       
Sbjct: 65  -LAIAAVIYSLGRISGAHINPAVTIALWSIGRFPGREVVPYIVAQFIGAALGSLLFLACV 123
Query: 175 HPI------MGGGVTVPSAGYGEAFALEFIISFNLMF 205
            P       +G     P  GYG+A   E I +F LM 
Sbjct: 124 GPAAATVGGLGATAPFPGIGYGQAILTEAIGTFLLML 160

>pdb|2O9E|A Chain A, Crystal Structure Of Aqpz Mutant T183c Complexed With Mercury Length = 234

Iteration: 1
 Score = 61.6 bits (148), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 40/96 (41%), Positives = 54/96 (56%), Gaps = 5/96 (5%)
Query: 75  RKVGAEFVGTLILIFAGTATAIVNQKTQGSETLIGLAG---STGLAVMVVILSTGHISGA 131
           RK+ AE  GT  L+F G+ +A++       E  IG AG   + GL V+ +  + GHISG 
Sbjct: 6   RKLAAESFGTFWLVFGGSGSAVLAAGFP--ELGIGFAGVALAFGLTVLTMAFAVGHISGG 63
Query: 132 HLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAA 167
           H NPAVTI   A   FP K V  Y+ AQ++  + AA
Sbjct: 64  HFNPAVTIGLWAGGRFPAKEVVGYVIAQVVGGIVAA 99

>pdb|2O9D|A Chain A, Crystal Structure Of Aqpz Mutant T183c. Length = 234

Iteration: 1
 Score = 61.6 bits (148), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 40/96 (41%), Positives = 54/96 (56%), Gaps = 5/96 (5%)
Query: 75  RKVGAEFVGTLILIFAGTATAIVNQKTQGSETLIGLAG---STGLAVMVVILSTGHISGA 131
           RK+ AE  GT  L+F G+ +A++       E  IG AG   + GL V+ +  + GHISG 
Sbjct: 6   RKLAAESFGTFWLVFGGSGSAVLAAGFP--ELGIGFAGVALAFGLTVLTMAFAVGHISGG 63
Query: 132 HLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAA 167
           H NPAVTI   A   FP K V  Y+ AQ++  + AA
Sbjct: 64  HFNPAVTIGLWAGGRFPAKEVVGYVIAQVVGGIVAA 99

>pdb|2O9F|A Chain A, Crystal Structure Of Aqpz Mutant L170c Length = 234

Iteration: 1
 Score = 61.6 bits (148), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 40/96 (41%), Positives = 54/96 (56%), Gaps = 5/96 (5%)
Query: 75  RKVGAEFVGTLILIFAGTATAIVNQKTQGSETLIGLAG---STGLAVMVVILSTGHISGA 131
           RK+ AE  GT  L+F G+ +A++       E  IG AG   + GL V+ +  + GHISG 
Sbjct: 6   RKLAAESFGTFWLVFGGSGSAVLAAGFP--ELGIGFAGVALAFGLTVLTMAFAVGHISGG 63
Query: 132 HLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAA 167
           H NPAVTI   A   FP K V  Y+ AQ++  + AA
Sbjct: 64  HFNPAVTIGLWAGGRFPAKEVVGYVIAQVVGGIVAA 99

>pdb|3NKC|A Chain A, Crystal Structure Of Aqpz F43w,H174g,T183f Length = 234

Iteration: 1
 Score = 61.2 bits (147), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 40/96 (41%), Positives = 53/96 (55%), Gaps = 5/96 (5%)
Query: 75  RKVGAEFVGTLILIFAGTATAIVNQKTQGSETLIGLAG---STGLAVMVVILSTGHISGA 131
           RK+ AE  GT  L+F G  +A++       E  IG AG   + GL V+ +  + GHISG 
Sbjct: 6   RKLAAECFGTFWLVFGGCGSAVLAAGFP--ELGIGFAGVALAWGLTVLTMAFAVGHISGG 63
Query: 132 HLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAA 167
           H NPAVTI   A   FP K V  Y+ AQ++  + AA
Sbjct: 64  HFNPAVTIGLWAGGRFPAKEVVGYVIAQVVGGIVAA 99

>pdb|3NKA|A Chain A, Crystal Structure Of Aqpz H174g,T183f Length = 234

Iteration: 1
 Score = 61.2 bits (147), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 40/96 (41%), Positives = 53/96 (55%), Gaps = 5/96 (5%)
Query: 75  RKVGAEFVGTLILIFAGTATAIVNQKTQGSETLIGLAG---STGLAVMVVILSTGHISGA 131
           RK+ AE  GT  L+F G  +A++       E  IG AG   + GL V+ +  + GHISG 
Sbjct: 6   RKLAAECFGTFWLVFGGCGSAVLAAGFP--ELGIGFAGVALAFGLTVLTMAFAVGHISGG 63
Query: 132 HLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAA 167
           H NPAVTI   A   FP K V  Y+ AQ++  + AA
Sbjct: 64  HFNPAVTIGLWAGGRFPAKEVVGYVIAQVVGGIVAA 99

>pdb|3C02|A Chain A, X-Ray Structure Of The Aquaglyceroporin From Plasmodium Falciparum Length = 258

Iteration: 1
 Score = 60.8 bits (146), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 35/102 (34%), Positives = 52/102 (50%)
Query: 74  ARKVGAEFVGTLILIFAGTATAIVNQKTQGSETLIGLAGSTGLAVMVVILSTGHISGAHL 133
            R+   EF+GT +L+F G         T  S     L    GLAV   IL +  +SGAHL
Sbjct: 10  VREFIGEFLGTFVLMFLGEGATANFHTTGLSGDWYKLCLGWGLAVFFGILVSAKLSGAHL 69
Query: 134 NPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFH 175
           N AV+I  +++  F  K +PVY  AQ++ +      + G++H
Sbjct: 70  NLAVSIGLSSINKFDLKKIPVYFFAQLLGAFVGTSTVYGLYH 111

>pdb|1RC2|B Chain B, 2.5 Angstrom Resolution X-Ray Structure Of Aquaporin Z Length = 231

Iteration: 1
 Score = 60.8 bits (146), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 40/96 (41%), Positives = 53/96 (55%), Gaps = 5/96 (5%)
Query: 75  RKVGAEFVGTLILIFAGTATAIVNQKTQGSETLIGLAG---STGLAVMVVILSTGHISGA 131
           RK+ AE  GT  L+F G  +A++       E  IG AG   + GL V+ +  + GHISG 
Sbjct: 3   RKLAAECFGTFWLVFGGCGSAVLAAGFP--ELGIGFAGVALAFGLTVLTMAFAVGHISGG 60
Query: 132 HLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAA 167
           H NPAVTI   A   FP K V  Y+ AQ++  + AA
Sbjct: 61  HFNPAVTIGLWAGGRFPAKEVVGYVIAQVVGGIVAA 96

>pdb|3NK5|A Chain A, Crystal Structure Of Aqpz Mutant F43w Length = 234

Iteration: 1
 Score = 59.7 bits (143), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 41/97 (42%), Positives = 54/97 (55%), Gaps = 7/97 (7%)
Query: 75  RKVGAEFVGTLILIFAGTATAIVNQKTQGSETL-IGLAG---STGLAVMVVILSTGHISG 130
           RK+ AE  GT  L+F G  +A++     G   L IG AG   + GL V+ +  + GHISG
Sbjct: 6   RKLAAECFGTFWLVFGGCGSAVL---AAGFPALGIGFAGVALAWGLTVLTMAFAVGHISG 62
Query: 131 AHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAA 167
            H NPAVTI   A   FP K V  Y+ AQ++  + AA
Sbjct: 63  GHFNPAVTIGLWAGGRFPAKEVVGYVIAQVVGGIVAA 99

>pdb|2EVU|A Chain A, Crystal Structure Of Aquaporin Aqpm At 2.3a Resolution Length = 246

Iteration: 1
 Score = 58.2 bits (139), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 53/155 (34%), Positives = 73/155 (47%), Gaps = 27/155 (17%)
Query: 75  RKVGAEFVGTLILIFAGTATAIVNQKTQGSET-------------------LIGLAGSTG 115
           ++  AEF+GT IL+F G  +A V        T                    IGLA   G
Sbjct: 6   KRCIAEFIGTFILVFFGAGSAAVTLMIASGGTSPNPFNIGIGLLGGLGDWVAIGLA--FG 63
Query: 116 LAVMVVILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFAL---KG 172
            A+   I + G+ISG H+NPAVTI   ++K FP + V  YI AQ++ +   +F      G
Sbjct: 64  FAIAASIYALGNISGCHINPAVTIGLWSVKKFPGREVVPYIIAQLLGAAFGSFIFLQCAG 123
Query: 173 IFHPIMGG-GVTVPSAG--YGEAFALEFIISFNLM 204
           I    +GG G T P  G  Y +A   E + +F LM
Sbjct: 124 IGAATVGGLGATAPFPGISYWQAMLAEVVGTFLLM 158

>pdb|2B6O|A Chain A, Electron Crystallographic Structure Of Lens Aquaporin-0 (Aqp0) (Lens Mip) At 1.9a Resolution, In A Closed Pore State Length = 263

Iteration: 1
 Score = 55.5 bits (132), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 66/135 (48%), Gaps = 6/135 (4%)
Query: 75  RKVGAEFVGTLILIFAGTATAIVNQKTQGSETLIGLAGSTGLAVMVVILSTGHISGAHLN 134
           R + AEF  TL  +F G   ++  +   G   ++ +A + GLA+  ++ + GHISGAH+N
Sbjct: 11  RAIFAEFFATLFYVFFGLGASL--RWAPGPLHVLQVALAFGLALATLVQAVGHISGAHVN 68
Query: 135 PAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFHPIMGGGVTV----PSAGYG 190
           PAVT AF             Y+ AQ++ ++  A  L  +  P + G + +    P    G
Sbjct: 69  PAVTFAFLVGSQMSLLRAICYVVAQLLGAVAGAAVLYSVTPPAVRGNLALNTLHPGVSVG 128
Query: 191 EAFALEFIISFNLMF 205
           +A  +E  ++   + 
Sbjct: 129 QATIVEIFLTLQFVL 143

>pdb|2B5F|A Chain A, Crystal Structure Of The Spinach Aquaporin Sopip2;1 In An Open Conformation To 3.9 Resolution Length = 303

Iteration: 1
 Score = 55.5 bits (132), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 47/141 (33%), Positives = 71/141 (50%), Gaps = 12/141 (8%)
Query: 75  RKVGAEFVGTLILIFAGTATAIVNQKTQ---GSETLIGLAGSTGLAVMVVILSTGHISGA 131
           R   AEF+ TL+ ++   AT I + K     GS  L+G+A + G  + V++  T  ISG 
Sbjct: 39  RAAIAEFIATLLFLYITVATVIGHSKETVVCGSVGLLGIAWAFGGMIFVLVYCTAGISGG 98
Query: 132 HLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCA-----AFALKGIFHPIMGGGVTVPS 186
           H+NPAVT      +        VY+ AQ + ++C      AF +KG ++   GGG    +
Sbjct: 99  HINPAVTFGLFLARKVSLLRALVYMIAQCLGAICGVGLVKAF-MKGPYNQ-FGGGANSVA 156
Query: 187 AGY--GEAFALEFIISFNLMF 205
            GY  G A   E I +F L++
Sbjct: 157 LGYNKGTALGAEIIGTFVLVY 177

>pdb|1SOR|A Chain A, Aquaporin-0 Membrane Junctions Reveal The Structure Of A Closed Water Pore Length = 235

Iteration: 1
 Score = 55.1 bits (131), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 38/134 (28%), Positives = 66/134 (49%), Gaps = 6/134 (4%)
Query: 75  RKVGAEFVGTLILIFAGTATAIVNQKTQGSETLIGLAGSTGLAVMVVILSTGHISGAHLN 134
           R + AEF  TL  +F G   ++  +   G   ++ +A + GLA+  ++ + GHISGAH+N
Sbjct: 7   RAIFAEFFATLFYVFFGLGASL--RWAPGPLHVLQVALAFGLALATLVQAVGHISGAHVN 64
Query: 135 PAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFHPIMGGGVTV----PSAGYG 190
           PAVT AF             Y+ AQ++ ++  A  L  +  P + G + +    P    G
Sbjct: 65  PAVTFAFLVGSQMSLLRAICYVVAQLLGAVAGAAVLYSVTPPAVRGNLALNTLHPGVSVG 124
Query: 191 EAFALEFIISFNLM 204
           +A  +E  ++   +
Sbjct: 125 QATIVEIFLTLQFV 138

>pdb|1J4N|A Chain A, Crystal Structure Of The Aqp1 Water Channel Length = 271

Iteration: 1
 Score = 55.1 bits (131), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 41/142 (28%), Positives = 65/142 (45%), Gaps = 11/142 (7%)
Query: 75  RKVGAEFVGTLILIFAGTATAI-------VNQKTQGSETLIGLAGSTGLAVMVVILSTGH 127
           R V AEF+  ++ IF    +A+        NQ T   +  + ++ + GL++  +  S GH
Sbjct: 12  RAVVAEFLAMILFIFISIGSALGFHYPIKSNQTTGAVQDNVKVSLAFGLSIATLAQSVGH 71
Query: 128 ISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFHPI----MGGGVT 183
           ISGAHLNPAVT+              +YI AQ + ++ A   L GI   +    +G    
Sbjct: 72  ISGAHLNPAVTLGLLLSCQISVLRAIMYIIAQCVGAIVATAILSGITSSLPDNSLGLNAL 131
Query: 184 VPSAGYGEAFALEFIISFNLMF 205
            P    G+   +E I +  L+ 
Sbjct: 132 APGVNSGQGLGIEIIGTLQLVL 153

>pdb|3CN6|A Chain A, Crystal Structure Of The Spinach Aquaporin Sopip2;1 S274e Mutant Length = 304

Iteration: 1
 Score = 55.1 bits (131), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 47/141 (33%), Positives = 71/141 (50%), Gaps = 12/141 (8%)
Query: 75  RKVGAEFVGTLILIFAGTATAIVNQKTQ---GSETLIGLAGSTGLAVMVVILSTGHISGA 131
           R   AEF+ TL+ ++   AT I + K     GS  L+G+A + G  + V++  T  ISG 
Sbjct: 62  RAAIAEFIATLLFLYITVATVIGHSKETVVCGSVGLLGIAWAFGGMIFVLVYCTAGISGG 121
Query: 132 HLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCA-----AFALKGIFHPIMGGGVTVPS 186
           H+NPAVT      +        VY+ AQ + ++C      AF +KG ++   GGG    +
Sbjct: 122 HINPAVTFGLFLARKVSLLRALVYMIAQCLGAICGVGLVKAF-MKGPYNQ-FGGGANSVA 179
Query: 187 AGY--GEAFALEFIISFNLMF 205
            GY  G A   E I +F L++
Sbjct: 180 LGYNKGTALGAEIIGTFVLVY 200

>pdb|3CN5|A Chain A, Crystal Structure Of The Spinach Aquaporin Sopip2;1 S115e, S274e Mutant Length = 304

Iteration: 1
 Score = 55.1 bits (131), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 47/141 (33%), Positives = 71/141 (50%), Gaps = 12/141 (8%)
Query: 75  RKVGAEFVGTLILIFAGTATAIVNQKTQ---GSETLIGLAGSTGLAVMVVILSTGHISGA 131
           R   AEF+ TL+ ++   AT I + K     GS  L+G+A + G  + V++  T  ISG 
Sbjct: 62  RAAIAEFIATLLFLYITVATVIGHSKETVVCGSVGLLGIAWAFGGMIFVLVYCTAGISGG 121
Query: 132 HLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCA-----AFALKGIFHPIMGGGVTVPS 186
           H+NPAVT      +        VY+ AQ + ++C      AF +KG ++   GGG    +
Sbjct: 122 HINPAVTFGLFLARKVELLRALVYMIAQCLGAICGVGLVKAF-MKGPYNQ-FGGGANSVA 179
Query: 187 AGY--GEAFALEFIISFNLMF 205
            GY  G A   E I +F L++
Sbjct: 180 LGYNKGTALGAEIIGTFVLVY 200

>pdb|1Z98|A Chain A, Crystal Structure Of The Spinach Aquaporin Sopip2;1 In A Closed Conformation Length = 281

Iteration: 1
 Score = 55.1 bits (131), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 47/141 (33%), Positives = 71/141 (50%), Gaps = 12/141 (8%)
Query: 75  RKVGAEFVGTLILIFAGTATAIVNQKTQ---GSETLIGLAGSTGLAVMVVILSTGHISGA 131
           R   AEF+ TL+ ++   AT I + K     GS  L+G+A + G  + V++  T  ISG 
Sbjct: 39  RAAIAEFIATLLFLYITVATVIGHSKETVVCGSVGLLGIAWAFGGMIFVLVYCTAGISGG 98
Query: 132 HLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCA-----AFALKGIFHPIMGGGVTVPS 186
           H+NPAVT      +        VY+ AQ + ++C      AF +KG ++   GGG    +
Sbjct: 99  HINPAVTFGLFLARKVSLLRALVYMIAQCLGAICGVGLVKAF-MKGPYNQ-FGGGANSVA 156
Query: 187 AGY--GEAFALEFIISFNLMF 205
            GY  G A   E I +F L++
Sbjct: 157 LGYNKGTALGAEIIGTFVLVY 177

>pdb|3M9I|A Chain A, Electron Crystallographic Structure Of Lens Aquaporin-0 (Aqp Mip) In E. Coli Polar Lipids Length = 220

Iteration: 1
 Score = 55.1 bits (131), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 38/134 (28%), Positives = 66/134 (49%), Gaps = 6/134 (4%)
Query: 75  RKVGAEFVGTLILIFAGTATAIVNQKTQGSETLIGLAGSTGLAVMVVILSTGHISGAHLN 134
           R + AEF  TL  +F G   ++  +   G   ++ +A + GLA+  ++ + GHISGAH+N
Sbjct: 5   RAIFAEFFATLFYVFFGLGASL--RWAPGPLHVLQVALAFGLALATLVQAVGHISGAHVN 62
Query: 135 PAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFHPIMGGGVTV----PSAGYG 190
           PAVT AF             Y+ AQ++ ++  A  L  +  P + G + +    P    G
Sbjct: 63  PAVTFAFLVGSQMSLLRAICYVVAQLLGAVAGAAVLYSVTPPAVRGNLALNTLHPGVSVG 122
Query: 191 EAFALEFIISFNLM 204
           +A  +E  ++   +
Sbjct: 123 QATIVEIFLTLQFV 136

>pdb|3CLL|A Chain A, Crystal Structure Of The Spinach Aquaporin Sopip2;1 S115e Mutant Length = 300

Iteration: 1
 Score = 55.1 bits (131), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 47/141 (33%), Positives = 71/141 (50%), Gaps = 12/141 (8%)
Query: 75  RKVGAEFVGTLILIFAGTATAIVNQKTQ---GSETLIGLAGSTGLAVMVVILSTGHISGA 131
           R   AEF+ TL+ ++   AT I + K     GS  L+G+A + G  + V++  T  ISG 
Sbjct: 58  RAAIAEFIATLLFLYITVATVIGHSKETVVCGSVGLLGIAWAFGGMIFVLVYCTAGISGG 117
Query: 132 HLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCA-----AFALKGIFHPIMGGGVTVPS 186
           H+NPAVT      +        VY+ AQ + ++C      AF +KG ++   GGG    +
Sbjct: 118 HINPAVTFGLFLARKVELLRALVYMIAQCLGAICGVGLVKAF-MKGPYNQ-FGGGANSVA 175
Query: 187 AGY--GEAFALEFIISFNLMF 205
            GY  G A   E I +F L++
Sbjct: 176 LGYNKGTALGAEIIGTFVLVY 196

>pdb|1YMG|A Chain A, The Channel Architecture Of Aquaporin O At 2.2 Angstrom Resolution Length = 263

Iteration: 1
 Score = 54.3 bits (129), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 37/135 (27%), Positives = 66/135 (48%), Gaps = 6/135 (4%)
Query: 75  RKVGAEFVGTLILIFAGTATAIVNQKTQGSETLIGLAGSTGLAVMVVILSTGHISGAHLN 134
           R + AEF  +L  +F G   ++  +   G   ++ +A + GLA+  ++ + GHISGAH+N
Sbjct: 11  RAICAEFFASLFYVFFGLGASL--RWAPGPLHVLQVALAFGLALATLVQAVGHISGAHVN 68
Query: 135 PAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFHPIMGGGVTV----PSAGYG 190
           PAVT AF             Y+ AQ++ ++  A  L  +  P + G + +    P    G
Sbjct: 69  PAVTFAFLVGSQMSLLRAICYMVAQLLGAVAGAAVLYSVTPPAVRGNLALNTLHPGVSVG 128
Query: 191 EAFALEFIISFNLMF 205
           +A  +E  ++   + 
Sbjct: 129 QATIVEIFLTLQFVL 143

>pdb|2ZZ9|A Chain A, Structure Of Aquaporin-4 S180d Mutant At 2.8 A Resolution By Electron Crystallography Length = 301

Iteration: 1
 Score = 53.1 bits (126), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 43/142 (30%), Positives = 69/142 (48%), Gaps = 16/142 (11%)
Query: 75  RKVGAEFVGTLILIFAGTATAIVNQKTQGSET-----LIGLAGSTGLAVMVVILSTGHIS 129
           + V AEF+  LI +     + I      GSE      ++ ++   GL++  ++   GHIS
Sbjct: 14  KAVTAEFLAMLIFVLLSVGSTI---NWGGSENPLPVDMVLISLCFGLSIATMVQCFGHIS 70
Query: 130 GAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFHPIMGGGVTVP---- 185
           G H+NPAVT+A    +         YI AQ + ++  A  L  +  P + GG+ V     
Sbjct: 71  GGHINPAVTVAMVCTRKISIAKSVFYITAQCLGAIIGAGILYLVTPPSVVGGLGVTTVHG 130
Query: 186 --SAGYGEAFALEFIISFNLMF 205
             +AG+G    +E II+F L+F
Sbjct: 131 NLTAGHG--LLVELIITFQLVF 150

>pdb|3IYZ|A Chain A, Structure Of Aquaporin-4 S180d Mutant At 10.0 A Resolution From Electron Micrograph Length = 340

Iteration: 1
 Score = 53.1 bits (126), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 43/142 (30%), Positives = 69/142 (48%), Gaps = 16/142 (11%)
Query: 75  RKVGAEFVGTLILIFAGTATAIVNQKTQGSET-----LIGLAGSTGLAVMVVILSTGHIS 129
           + V AEF+  LI +     + I      GSE      ++ ++   GL++  ++   GHIS
Sbjct: 53  KAVTAEFLAMLIFVLLSVGSTI---NWGGSENPLPVDMVLISLCFGLSIATMVQCFGHIS 109
Query: 130 GAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFHPIMGGGVTVP---- 185
           G H+NPAVT+A    +         YI AQ + ++  A  L  +  P + GG+ V     
Sbjct: 110 GGHINPAVTVAMVCTRKISIAKSVFYITAQCLGAIIGAGILYLVTPPSVVGGLGVTTVHG 169
Query: 186 --SAGYGEAFALEFIISFNLMF 205
             +AG+G    +E II+F L+F
Sbjct: 170 NLTAGHG--LLVELIITFQLVF 189

>pdb|2D57|A Chain A, Double Layered 2d Crystal Structure Of Aquaporin-4 (Aqp4m23) At 3.2 A Resolution By Electron Crystallography Length = 301

Iteration: 1
 Score = 53.1 bits (126), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 43/142 (30%), Positives = 69/142 (48%), Gaps = 16/142 (11%)
Query: 75  RKVGAEFVGTLILIFAGTATAIVNQKTQGSET-----LIGLAGSTGLAVMVVILSTGHIS 129
           + V AEF+  LI +     + I      GSE      ++ ++   GL++  ++   GHIS
Sbjct: 14  KAVTAEFLAMLIFVLLSVGSTI---NWGGSENPLPVDMVLISLCFGLSIATMVQCFGHIS 70
Query: 130 GAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFHPIMGGGVTVP---- 185
           G H+NPAVT+A    +         YI AQ + ++  A  L  +  P + GG+ V     
Sbjct: 71  GGHINPAVTVAMVCTRKISIAKSVFYITAQCLGAIIGAGILYLVTPPSVVGGLGVTTVHG 130
Query: 186 --SAGYGEAFALEFIISFNLMF 205
             +AG+G    +E II+F L+F
Sbjct: 131 NLTAGHG--LLVELIITFQLVF 150

>pdb|1FX8|A Chain A, Crystal Structure Of The E. Coli Glycerol Facilitator (Glpf) With Substrate Glycerol Length = 281

Iteration: 1
 Score = 52.8 bits (125), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 47/148 (31%), Positives = 68/148 (45%), Gaps = 22/148 (14%)
Query: 79  AEFVGTLILIFAGTATAIVNQKTQGSETLIGLAGSTGLAVMVVILSTGHISGAHLNPAVT 138
           AEF+GT +LIF G       +    S     ++   GL V + I  T  +SGAHLNPAVT
Sbjct: 13  AEFLGTGLLIFFGVGCVAALKVAGASFGQWEISVIWGLGVAMAIYLTAGVSGAHLNPAVT 72
Query: 139 IAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIF----------HPIMGGGVTV---- 184
           IA      F  + V  +I +Q+  + CAA  + G++          H I+ G V      
Sbjct: 73  IALWLFACFDKRKVIPFIVSQVAGAFCAAALVYGLYYNLFFDFEQTHHIVRGSVESVDLA 132
Query: 185 --------PSAGYGEAFALEFIISFNLM 204
                   P   + +AFA+E +I+  LM
Sbjct: 133 GTFSTYPNPHINFVQAFAVEMVITAILM 160

>pdb|1LDF|A Chain A, Crystal Structure Of The E. Coli Glycerol Facilitator (Glpf) Mutation W48f, F200t Length = 281

Iteration: 1
 Score = 52.4 bits (124), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/148 (31%), Positives = 68/148 (45%), Gaps = 22/148 (14%)
Query: 79  AEFVGTLILIFAGTATAIVNQKTQGSETLIGLAGSTGLAVMVVILSTGHISGAHLNPAVT 138
           AEF+GT +LIF G       +    S     ++   GL V + I  T  +SGAHLNPAVT
Sbjct: 13  AEFLGTGLLIFFGVGCVAALKVAGASFGQWEISVIFGLGVAMAIYLTAGVSGAHLNPAVT 72
Query: 139 IAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIF----------HPIMGGGVTV---- 184
           IA      F  + V  +I +Q+  + CAA  + G++          H I+ G V      
Sbjct: 73  IALWLFACFDKRKVIPFIVSQVAGAFCAAALVYGLYYNLFFDFEQTHHIVRGSVESVDLA 132
Query: 185 --------PSAGYGEAFALEFIISFNLM 204
                   P   + +AFA+E +I+  LM
Sbjct: 133 GTFSTYPNPHINFVQAFAVEMVITAILM 160

>pdb|3GD8|A Chain A, Crystal Structure Of Human Aquaporin 4 At 1.8 And Its Mechanism Of Conductance Length = 223

Iteration: 1
 Score = 50.4 bits (119), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 43/141 (30%), Positives = 66/141 (46%), Gaps = 14/141 (9%)
Query: 75  RKVGAEFVGTLILIFAGTATAI----VNQKTQGSETLIGLAGSTGLAVMVVILSTGHISG 130
           + V AEF+  LI +     + I      +       LI L    GL++  ++   GHISG
Sbjct: 5   KAVTAEFLAMLIFVLLSLGSTINWGGTEKPLPVDMVLISLC--FGLSIATMVQCFGHISG 62
Query: 131 AHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFHPIMGGGVTVP----- 185
            H+NPAVT+A    +         YI AQ + ++  A  L  +  P + GG+ V      
Sbjct: 63  GHINPAVTVAMVCTRKISIAKSVFYIAAQCLGAIIGAGILYLVTPPSVVGGLGVTMVHGN 122
Query: 186 -SAGYGEAFALEFIISFNLMF 205
            +AG+G    +E II+F L+F
Sbjct: 123 LTAGHG--LLVELIITFQLVF 141

>pdb|3D9S|A Chain A, Human Aquaporin 5 (Aqp5) - High Resolution X-Ray Structure Length = 266

Iteration: 1
 Score = 50.1 bits (118), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 38/134 (28%), Positives = 67/134 (50%), Gaps = 8/134 (5%)
Query: 75  RKVGAEFVGTLILIFAGTATAIVNQKTQGSETLIGLAGSTGLAVMVVILSTGHISGAHLN 134
           + V AEF+ TLI +F G  +A+  +      T++ +A + GLA+  +  + G +SG H+N
Sbjct: 13  KAVFAEFLATLIFVFFGLGSAL--KWPSALPTILQIALAFGLAIGTLAQALGPVSGGHIN 70
Query: 135 PAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFHPIMGGG-----VTVPSAGY 189
           PA+T+A              Y+ AQ++ ++  A  L G+  P+   G         +   
Sbjct: 71  PAITLALLVGNQISLLRAFFYVAAQLVGAIAGAGILYGV-APLNARGNLAVNALNNNTTQ 129
Query: 190 GEAFALEFIISFNL 203
           G+A  +E I++F L
Sbjct: 130 GQAMVVELILTFQL 143

>pdb|1FQY|A Chain A, Structure Of Aquaporin-1 At 3.8 A Resolution By Electron Crystallography Length = 269

Iteration: 1
 Score = 50.1 bits (118), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 38/140 (27%), Positives = 62/140 (44%), Gaps = 9/140 (6%)
Query: 75  RKVGAEFVGTLILIFAGTATAI-----VNQKTQGSETLIGLAGSTGLAVMVVILSTGHIS 129
           R V AEF+ T + +F    +A+     V       +  + ++ + GL++  +  S GHIS
Sbjct: 12  RAVVAEFLATTLFVFISIGSALGFKYPVGNNQTAVQDNVKVSLAFGLSIATLAQSVGHIS 71
Query: 130 GAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFHPIMGGGV----TVP 185
           GAHLNPAVT+              +YI AQ + ++ A   L GI   + G  +       
Sbjct: 72  GAHLNPAVTLGLLLSCQISIFRALMYIIAQCVGAIVATAILSGITSSLTGNSLGRNDLAD 131
Query: 186 SAGYGEAFALEFIISFNLMF 205
               G+   +E I +  L+ 
Sbjct: 132 GVNSGQGLGIEIIGTLQLVL 151

>pdb|3LLQ|A Chain A, Aquaporin Structure From Plant Pathogen Agrobacterium Tumerfaciens Length = 256

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/85 (35%), Positives = 42/85 (49%), Gaps = 5/85 (5%)
Query: 75  RKVGAEFVGTLILIFAGTATAIVNQKTQGSETLIGLAG---STGLAVMVVILSTGHISGA 131
           RK+ AEF GT  L+F G  +A+        E  IG  G   + GL V+ +  + G ISG 
Sbjct: 31  RKLLAEFFGTFWLVFGGCGSAVFAAAFP--ELGIGFTGVALAFGLTVLTMAYAVGGISGG 88
Query: 132 HLNPAVTIAFAALKHFPWKHVPVYI 156
           H NPAV++       FP   +  Y+
Sbjct: 89  HFNPAVSVGLTVAGRFPASSLVPYV 113

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	218
3llq_A	256	Aquaporin Z 2; aquaporin tetramer, membrane protei	1e-44
3llq_A	256	Aquaporin Z 2; aquaporin tetramer, membrane protei	7e-08
2o9g_A	234	Aquaporin Z; integral membrane protein, structural	2e-44
2o9g_A	234	Aquaporin Z; integral membrane protein, structural	7e-09
3c02_A	258	Aquaglyceroporin; membrane protein, glycerol, wate	4e-44
3c02_A	258	Aquaglyceroporin; membrane protein, glycerol, wate	1e-06
2f2b_A	246	Aquaporin AQPM; protein, integral membrane protein	1e-43
2f2b_A	246	Aquaporin AQPM; protein, integral membrane protein	5e-07
2zz9_A	301	Aquaporin-4; water transport, water channel, two-d	3e-40
2zz9_A	301	Aquaporin-4; water transport, water channel, two-d	8e-09
2b6o_A	263	Aquaporin-0, lens fiber major intrinsic protein; a	3e-40
2b6o_A	263	Aquaporin-0, lens fiber major intrinsic protein; a	7e-09
3iyz_A	340	Aquaporin-4; water transport, water channel, two-d	4e-40
3iyz_A	340	Aquaporin-4; water transport, water channel, two-d	1e-08
3gd8_A	223	Aquaporin-4; proton exclusion, structural genomics	1e-38
3gd8_A	223	Aquaporin-4; proton exclusion, structural genomics	1e-08
2w2e_A	279	AQY1, aquaporin, aquaporin PIP2-7 7; yeast, gating	1e-36
2w2e_A	279	AQY1, aquaporin, aquaporin PIP2-7 7; yeast, gating	3e-06
3d9s_A	266	Aquaporin-5, AQP-5; aquaglyceroporin, membrane pro	4e-35
3d9s_A	266	Aquaporin-5, AQP-5; aquaglyceroporin, membrane pro	2e-07
1j4n_A	271	Aquaporin 1; membrane protein, channel protein, tr	2e-34
1j4n_A	271	Aquaporin 1; membrane protein, channel protein, tr	2e-07
3cn5_A	304	Aquaporin; membrane protein, transmembrane, transp	4e-34
3cn5_A	304	Aquaporin; membrane protein, transmembrane, transp	3e-08
1ldf_A	281	Glycerol uptake facilitator protein; glycerol-cond	2e-32

>3llq_A Aquaporin Z 2; aquaporin tetramer, membrane protein, water channel, structu genomics, PSI-2, protein structure initiative; 2.01A {Agrobacterium tumefaciens str} Length = 256

 Score =  148 bits (376), Expect = 1e-44
 Identities = 46/167 (27%), Positives = 72/167 (43%), Gaps = 13/167 (7%)

Query: 64  CSLPPPPVSLARKVGAEFVGTLILIFAGTATAIVNQK-TQGSETLIGLAGSTGLAVMVVI 122
            +L      + RK+ AEF GT  L+F G  +A+      +      G+A + GL V+ + 
Sbjct: 20  ENLYFQSYVMGRKLLAEFFGTFWLVFGGCGSAVFAAAFPELGIGFTGVALAFGLTVLTMA 79

Query: 123 LSTGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFHPIMG--- 179
            + G ISG H NPAV++       FP   +  Y+ AQ+  ++ AA AL  I     G   
Sbjct: 80  YAVGGISGGHFNPAVSVGLTVAGRFPASSLVPYVIAQVAGAIVAAAALYVIATGKAGIDL 139

Query: 180 ------GGVTVPSAGY--GEAFALEFIISFNLMFVVTAVATDTRAVS 218
                 G       GY    A  +E I++   + V+   +T  R  +
Sbjct: 140 GGFASNGYGEHSPGGYSLVSALLIEIILTAFFLIVILG-STHGRVPA 185

>3llq_A Aquaporin Z 2; aquaporin tetramer, membrane protein, water channel, structu genomics, PSI-2, protein structure initiative; 2.01A {Agrobacterium tumefaciens str} Length = 256

 Score = 50.4 bits (121), Expect = 7e-08
 Identities = 19/112 (16%), Positives = 40/112 (35%), Gaps = 9/112 (8%)

Query: 67  PPPPVSLARKVGAEFVGTLILIFAGTATAIVNQKTQGSETLIGLAG-STGLAVMVVILST 125
            P   SL   +  E + T   +         + +        G A  + GLA+ ++ L +
Sbjct: 151 SPGGYSLVSALLIEIILTAFFLI--VILGSTHGRVPA-----GFAPIAIGLALTLIHLIS 203

Query: 126 GHISGAHLNPAVTIAFA-ALKHFPWKHVPVYIGAQIMASLCAAFALKGIFHP 176
             ++   +NPA +   A  +  +  + + ++  A I+     A   K     
Sbjct: 204 IPVTNTSVNPARSTGQALFVGGWALQQLWLFWLAPIVGGAAGAVIWKLFGEK 255

>2o9g_A Aquaporin Z; integral membrane protein, structural genomics, P protein structure initiative, center for structures of MEMB proteins, CSMP; HET: BOG; 1.90A {Escherichia coli} PDB: 2o9f_A* 2o9d_A* 2o9e_A 1rc2_B* 2abm_A* 3nk5_A* 3nka_A* 3nkc_A* Length = 234

 Score =  147 bits (373), Expect = 2e-44
 Identities = 49/161 (30%), Positives = 72/161 (44%), Gaps = 15/161 (9%)

Query: 71  VSLARKVGAEFVGTLILIFAGTATAIVNQK-TQGSETLIGLAGSTGLAVMVVILSTGHIS 129
             + RK+ AE  GT  L+F G+ +A++     +      G+A + GL V+ +  + GHIS
Sbjct: 2   SHMFRKLAAESFGTFWLVFGGSGSAVLAAGFPELGIGFAGVALAFGLTVLTMAFAVGHIS 61

Query: 130 GAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFHPIMG---------- 179
           G H NPAVTI   A   FP K V  Y+ AQ++  + AA  L  I     G          
Sbjct: 62  GGHFNPAVTIGLWAGGRFPAKEVVGYVIAQVVGGIVAAALLYLIASGKTGFDAAASGFAS 121

Query: 180 ---GGVTVPSAGYGEAFALEFIISFNLMFVVTAVATDTRAV 217
              G  +        A  +E ++S   + V+   ATD  A 
Sbjct: 122 NGYGEHSPGGYSMLSALVVELVLSAGFLLVIHG-ATDKFAP 161

>2o9g_A Aquaporin Z; integral membrane protein, structural genomics, P protein structure initiative, center for structures of MEMB proteins, CSMP; HET: BOG; 1.90A {Escherichia coli} PDB: 2o9f_A* 2o9d_A* 2o9e_A 1rc2_B* 2abm_A* 3nk5_A* 3nka_A* 3nkc_A* Length = 234

 Score = 53.0 bits (128), Expect = 7e-09
 Identities = 15/111 (13%), Positives = 35/111 (31%), Gaps = 7/111 (6%)

Query: 67  PPPPVSLARKVGAEFVGTLILIFAGTATAIVNQKTQGSETLIGLAGSTGLAVMVVILSTG 126
            P   S+   +  E V +   +                     +A   GLA  ++ L + 
Sbjct: 128 SPGGYSMLSALVVELVLSAGFLLVIHGAT----DKFAPAGFAPIA--IGLACTLIHLISI 181

Query: 127 HISGAHLNPAVTIAFA-ALKHFPWKHVPVYIGAQIMASLCAAFALKGIFHP 176
            ++   +NPA + A A     +  + +  +    I+  +      + +   
Sbjct: 182 PVTNTSVNPARSTAVAIFQGGWALEQLWFFWVVPIVGGIIGGLIYRTLLEK 232

>3c02_A Aquaglyceroporin; membrane protein, glycerol, water, transport, structural GEN PSI-2, protein structure initiative; HET: BOG; 2.05A {Plasmodium falciparum} Length = 258

 Score =  147 bits (373), Expect = 4e-44
 Identities = 46/155 (29%), Positives = 67/155 (43%), Gaps = 10/155 (6%)

Query: 72  SLARKVGAEFVGTLILIFAGTATAIVNQKTQGSETLIGLAGSTGLAVMVVILSTGHISGA 131
           S  R+   EF+GT +L+F G         T  S     L    GLAV   IL +  +SGA
Sbjct: 8   SYVREFIGEFLGTFVLMFLGEGATANFHTTGLSGDWYKLCLGWGLAVFFGILVSAKLSGA 67

Query: 132 HLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFHP---------IMGGGV 182
           HLN AV+I  +++  F  K +PVY  AQ++ +      + G++H                
Sbjct: 68  HLNLAVSIGLSSINKFDLKKIPVYFFAQLLGAFVGTSTVYGLYHGFISNSKIPQFAWETS 127

Query: 183 TVPSAGYGEAFALEFIISFNLMFVVTAVATDTRAV 217
             PS     AF  E I++  L+ V+  V  D    
Sbjct: 128 RNPSISLTGAFFNELILTGILLLVILVV-VDENIC 161

>3c02_A Aquaglyceroporin; membrane protein, glycerol, water, transport, structural GEN PSI-2, protein structure initiative; HET: BOG; 2.05A {Plasmodium falciparum} Length = 258

 Score = 47.2 bits (113), Expect = 1e-06
 Identities = 21/122 (17%), Positives = 47/122 (38%), Gaps = 11/122 (9%)

Query: 64  CSLPPPPVSLARKVGAEFVGTLILIFAGTATAIVNQKTQGSETLIGLAGSTGLAVMVVIL 123
            +   P +SL      E + T IL+       +V++   G   ++ L+   GL ++ + +
Sbjct: 125 ETSRNPSISLTGAFFNELILTGILLLV--ILVVVDENICGKFHILKLSSVVGLIILCIGI 182

Query: 124 STGHISGAHLNPAVTIA---FAALKHFP------WKHVPVYIGAQIMASLCAAFALKGIF 174
           + G  +G  LNP+  +     + + +          +  V + A  + S+        + 
Sbjct: 183 TFGGNTGFALNPSRDLGSRFLSLIAYGKDTFTKDNFYFWVPLVAPCVGSVVFCQFYDKVI 242

Query: 175 HP 176
            P
Sbjct: 243 CP 244

>2f2b_A Aquaporin AQPM; protein, integral membrane protein, channel, structural GENO PSI-2, protein structure initiative; 1.68A {Methanothermobacter marburgensis str} PDB: 2evu_A 3ne2_A* Length = 246

 Score =  145 bits (368), Expect = 1e-43
 Identities = 52/170 (30%), Positives = 77/170 (45%), Gaps = 23/170 (13%)

Query: 71  VSLARKVGAEFVGTLILIFAGTATAIVNQKTQGSET-----------------LIGLAGS 113
           VSL ++  AEF+GT IL+F G  +A V        T                  + +  +
Sbjct: 2   VSLTKRCIAEFIGTFILVFFGAGSAAVTLMIASGGTSPNPFNIGIGLLGGLGDWVAIGLA 61

Query: 114 TGLAVMVVILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGI 173
            G A+   I + G+ISG H+NPAVTI   ++K FP + V  YI AQ++ +   +F     
Sbjct: 62  FGFAIAASIYALGNISGCHINPAVTIGLWSVKKFPGREVVPYIIAQLLGAAFGSFIFLQC 121

Query: 174 FHP----IMGGGVTVPSAGY--GEAFALEFIISFNLMFVVTAVATDTRAV 217
                  + G G T P  G    +A   E + +F LM  +  +A D RA 
Sbjct: 122 AGIGAATVGGLGATAPFPGISYWQAMLAEVVGTFLLMITIMGIAVDERAP 171

>2f2b_A Aquaporin AQPM; protein, integral membrane protein, channel, structural GENO PSI-2, protein structure initiative; 1.68A {Methanothermobacter marburgensis str} PDB: 2evu_A 3ne2_A* Length = 246

 Score = 48.1 bits (115), Expect = 5e-07
 Identities = 30/113 (26%), Positives = 51/113 (45%), Gaps = 10/113 (8%)

Query: 67  PPPPVSLARKVGAEFVGTLILIFAGTATAIVNQKTQGSETLIGLAGSTGLAVMVVILSTG 126
           P P +S  + + AE VGT +L+      A+  +  +G   +I      GL V  +I + G
Sbjct: 137 PFPGISYWQAMLAEVVGTFLLMITIMGIAVDERAPKGFAGII-----IGLTVAGIITTLG 191

Query: 127 HISGAHLNPAVT-----IAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIF 174
           +ISG+ LNPA T               W +  +Y+   I+ ++ AA   + + 
Sbjct: 192 NISGSSLNPARTFGPYLNDMIFAGTDLWNYYSIYVIGPIVGAVLAALTYQYLT 244

>2zz9_A Aquaporin-4; water transport, water channel, two-dimensional crystal, electron diffraction, electron microscopy, membrane protein; HET: PEE; 2.80A {Rattus norvegicus} PDB: 2d57_A Length = 301

 Score =  138 bits (350), Expect = 3e-40
 Identities = 42/152 (27%), Positives = 69/152 (45%), Gaps = 6/152 (3%)

Query: 71  VSLARKVGAEFVGTLILIFAGTATAIVNQKTQGSE--TLIGLAGSTGLAVMVVILSTGHI 128
            +  + V AEF+  LI +     + I    ++      ++ ++   GL++  ++   GHI
Sbjct: 10  QAFWKAVTAEFLAMLIFVLLSVGSTINWGGSENPLPVDMVLISLCFGLSIATMVQCFGHI 69

Query: 129 SGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFHP--IMGGGVTVPS 186
           SG H+NPAVT+A    +         YI AQ + ++  A  L  +  P  + G GVT   
Sbjct: 70  SGGHINPAVTVAMVCTRKISIAKSVFYITAQCLGAIIGAGILYLVTPPSVVGGLGVTTVH 129

Query: 187 AGY--GEAFALEFIISFNLMFVVTAVATDTRA 216
                G    +E II+F L+F + A   D R 
Sbjct: 130 GNLTAGHGLLVELIITFQLVFTIFASCDDKRT 161

>2zz9_A Aquaporin-4; water transport, water channel, two-dimensional crystal, electron diffraction, electron microscopy, membrane protein; HET: PEE; 2.80A {Rattus norvegicus} PDB: 2d57_A Length = 301

 Score = 53.6 bits (129), Expect = 8e-09
 Identities = 22/110 (20%), Positives = 45/110 (40%), Gaps = 5/110 (4%)

Query: 67  PPPPVSLARKVGAEFVGTLILIFAGTATAIVNQKTQGSETLIGLAGSTGLAVMVVILSTG 126
               ++    +  E + T  L+F   A+    +        + LA   G +V +  L   
Sbjct: 128 VHGNLTAGHGLLVELIITFQLVFTIFASCDDKRTDVTG--SVALA--IGFSVAIGHLFAI 183

Query: 127 HISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFHP 176
           + +GA +NPA +    A+    W++  +Y    I+ ++ A    + +F P
Sbjct: 184 NYTGASMNPARSFG-PAVIMGNWENHWIYWVGPIIGAVLAGALYEYVFCP 232

>2b6o_A Aquaporin-0, lens fiber major intrinsic protein; aquaporin-0 junctions, AQP0, lens MIP, lipid-protein interac membrane, lipid bilayer; HET: MC3; 1.90A {Ovis aries} SCOP: f.19.1.1 PDB: 1ymg_A* 2b6p_A 2c32_A 1sor_A 3m9i_A* Length = 263

 Score =  137 bits (347), Expect = 3e-40
 Identities = 40/150 (26%), Positives = 68/150 (45%), Gaps = 6/150 (4%)

Query: 71  VSLARKVGAEFVGTLILIFAGTATAIVNQKTQGSETLIGLAGSTGLAVMVVILSTGHISG 130
            S  R + AEF  TL  +F G   ++      G   ++ +A + GLA+  ++ + GHISG
Sbjct: 7   ASFWRAIFAEFFATLFYVFFGLGASLRW--APGPLHVLQVALAFGLALATLVQAVGHISG 64

Query: 131 AHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFHPIM--GGGVTVPSAG 188
           AH+NPAVT AF             Y+ AQ++ ++  A  L  +  P +     +     G
Sbjct: 65  AHVNPAVTFAFLVGSQMSLLRAICYVVAQLLGAVAGAAVLYSVTPPAVRGNLALNTLHPG 124

Query: 189 Y--GEAFALEFIISFNLMFVVTAVATDTRA 216
              G+A  +E  ++   +  + A   + R 
Sbjct: 125 VSVGQATIVEIFLTLQFVLCIFATYDERRN 154

>2b6o_A Aquaporin-0, lens fiber major intrinsic protein; aquaporin-0 junctions, AQP0, lens MIP, lipid-protein interac membrane, lipid bilayer; HET: MC3; 1.90A {Ovis aries} SCOP: f.19.1.1 PDB: 1ymg_A* 2b6p_A 2c32_A 1sor_A 3m9i_A* Length = 263

 Score = 53.5 bits (129), Expect = 7e-09
 Identities = 22/108 (20%), Positives = 44/108 (40%), Gaps = 5/108 (4%)

Query: 69  PPVSLARKVGAEFVGTLILIFAGTATAIVNQKTQGSETLIGLAGSTGLAVMVVILSTGHI 128
           P VS+ +    E   TL  +      A  +++  G    + LA   G ++ +  L   + 
Sbjct: 123 PGVSVGQATIVEIFLTLQFVL--CIFATYDERRNGRLGSVALA--VGFSLTLGHLFGMYY 178

Query: 129 SGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFHP 176
           +GA +NPA + A  A+    + +  VY    ++ +   +     +  P
Sbjct: 179 TGAGMNPARSFA-PAILTRNFTNHWVYWVGPVIGAGLGSLLYDFLLFP 225

>3iyz_A Aquaporin-4; water transport, water channel, two-dimensional C membrane protein, baculovirus expression system, glycoprote membrane; 10.00A {Rattus norvegicus} Length = 340

 Score =  139 bits (351), Expect = 4e-40
 Identities = 42/153 (27%), Positives = 69/153 (45%), Gaps = 6/153 (3%)

Query: 70  PVSLARKVGAEFVGTLILIFAGTATAIVNQKTQGSE--TLIGLAGSTGLAVMVVILSTGH 127
             +  + V AEF+  LI +     + I    ++      ++ ++   GL++  ++   GH
Sbjct: 48  TQAFWKAVTAEFLAMLIFVLLSVGSTINWGGSENPLPVDMVLISLCFGLSIATMVQCFGH 107

Query: 128 ISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFHP--IMGGGVTVP 185
           ISG H+NPAVT+A    +         YI AQ + ++  A  L  +  P  + G GVT  
Sbjct: 108 ISGGHINPAVTVAMVCTRKISIAKSVFYITAQCLGAIIGAGILYLVTPPSVVGGLGVTTV 167

Query: 186 SAGY--GEAFALEFIISFNLMFVVTAVATDTRA 216
                 G    +E II+F L+F + A   D R 
Sbjct: 168 HGNLTAGHGLLVELIITFQLVFTIFASCDDKRT 200

>3iyz_A Aquaporin-4; water transport, water channel, two-dimensional C membrane protein, baculovirus expression system, glycoprote membrane; 10.00A {Rattus norvegicus} Length = 340

 Score = 53.3 bits (128), Expect = 1e-08
 Identities = 22/110 (20%), Positives = 45/110 (40%), Gaps = 5/110 (4%)

Query: 67  PPPPVSLARKVGAEFVGTLILIFAGTATAIVNQKTQGSETLIGLAGSTGLAVMVVILSTG 126
               ++    +  E + T  L+F   A+    +        + LA   G +V +  L   
Sbjct: 167 VHGNLTAGHGLLVELIITFQLVFTIFASCDDKRTDVTG--SVALA--IGFSVAIGHLFAI 222

Query: 127 HISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFHP 176
           + +GA +NPA +    A+    W++  +Y    I+ ++ A    + +F P
Sbjct: 223 NYTGASMNPARSFG-PAVIMGNWENHWIYWVGPIIGAVLAGALYEYVFCP 271

>3gd8_A Aquaporin-4; proton exclusion, structural genomics protein structure initiative, center for structures of MEMB proteins, CSMP, glycoprotein; HET: BOG; 1.80A {Homo sapiens} Length = 223

 Score =  132 bits (334), Expect = 1e-38
 Identities = 42/151 (27%), Positives = 69/151 (45%), Gaps = 6/151 (3%)

Query: 72  SLARKVGAEFVGTLILIFAGTATAIVNQKTQGSE--TLIGLAGSTGLAVMVVILSTGHIS 129
           +  + V AEF+  LI +     + I    T+      ++ ++   GL++  ++   GHIS
Sbjct: 2   AFWKAVTAEFLAMLIFVLLSLGSTINWGGTEKPLPVDMVLISLCFGLSIATMVQCFGHIS 61

Query: 130 GAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFHP--IMGGGVTVPSA 187
           G H+NPAVT+A    +         YI AQ + ++  A  L  +  P  + G GVT+   
Sbjct: 62  GGHINPAVTVAMVCTRKISIAKSVFYIAAQCLGAIIGAGILYLVTPPSVVGGLGVTMVHG 121

Query: 188 GY--GEAFALEFIISFNLMFVVTAVATDTRA 216
               G    +E II+F L+F + A     R 
Sbjct: 122 NLTAGHGLLVELIITFQLVFTIFASCDSKRT 152

>3gd8_A Aquaporin-4; proton exclusion, structural genomics protein structure initiative, center for structures of MEMB proteins, CSMP, glycoprotein; HET: BOG; 1.80A {Homo sapiens} Length = 223

 Score = 52.2 bits (126), Expect = 1e-08
 Identities = 25/110 (22%), Positives = 46/110 (41%), Gaps = 5/110 (4%)

Query: 67  PPPPVSLARKVGAEFVGTLILIFAGTATAIVNQKTQGSETLIGLAGSTGLAVMVVILSTG 126
               ++    +  E + T  L+F  T  A  + K       I LA   G +V +  L   
Sbjct: 119 VHGNLTAGHGLLVELIITFQLVF--TIFASCDSKRTDVTGSIALA--IGFSVAIGHLFAI 174

Query: 127 HISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFHP 176
           + +GA +NPA +    A+    W++  +Y    I+ ++ A    + +F P
Sbjct: 175 NYTGASMNPARSFG-PAVIMGNWENHWIYWVGPIIGAVLAGGLYEYVFCP 223

>2w2e_A AQY1, aquaporin, aquaporin PIP2-7 7; yeast, gating, membrane protein; HET: BOG; 1.15A {Komagataella pastoris} PDB: 2w1p_A* Length = 279

 Score =  128 bits (323), Expect = 1e-36
 Identities = 35/152 (23%), Positives = 59/152 (38%), Gaps = 8/152 (5%)

Query: 75  RKVGAEFVGTLILIFAGTATAIVNQKTQ-------GSETLIGLAGSTGLAVMVVILSTGH 127
             +  EFVGT + +++    A +  +             LI ++   G  VMV +  T  
Sbjct: 46  IAMSGEFVGTFLFLWSAFVIAQIANQAPETPDGGSNPAQLIMISFGFGFGVMVGVFITYR 105

Query: 128 ISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFHPIMGGGVTV-PS 186
           +SG +LNPAVT+A    +  P     +    QI+A + AA A   +    +     +   
Sbjct: 106 VSGGNLNPAVTLALVLARAIPPFRGILMAFTQIVAGMAAAGAASAMTPGEIAFANALGGG 165

Query: 187 AGYGEAFALEFIISFNLMFVVTAVATDTRAVS 218
           A       LE   +  L   V  +A +    +
Sbjct: 166 ASRTRGLFLEAFGTAILCLTVLMLAVEKHRAT 197

>2w2e_A AQY1, aquaporin, aquaporin PIP2-7 7; yeast, gating, membrane protein; HET: BOG; 1.15A {Komagataella pastoris} PDB: 2w1p_A* Length = 279

 Score = 45.8 bits (109), Expect = 3e-06
 Identities = 21/106 (19%), Positives = 36/106 (33%), Gaps = 5/106 (4%)

Query: 71  VSLARKVGAEFVGTLILIFAGTATAIVNQKTQGSETLIGLAGSTGLAVMVVILSTGHISG 130
            S  R +  E  GT IL       A+   +              G+A+++  L   + +G
Sbjct: 166 ASRTRGLFLEAFGTAILCLTVLMLAVEKHRATW---FAPFV--IGIALLIAHLICIYYTG 220

Query: 131 AHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFHP 176
           A LNPA +   A        +  +Y    I+ +  A    +     
Sbjct: 221 AGLNPARSFGPAVAARSFPNYHWIYWLGPILGAFLAYSIWQMWKWL 266

>3d9s_A Aquaporin-5, AQP-5; aquaglyceroporin, membrane protein, water transport, X-RAY diffraction, lipid, phosphatidylserine, PSF, NPA, AR/R, water channel; HET: PS6; 2.00A {Homo sapiens} Length = 266

 Score =  124 bits (313), Expect = 4e-35
 Identities = 41/150 (27%), Positives = 67/150 (44%), Gaps = 6/150 (4%)

Query: 71  VSLARKVGAEFVGTLILIFAGTATAIVNQKTQGSETLIGLAGSTGLAVMVVILSTGHISG 130
           V+  + V AEF+ TLI +F G  +A+       +   I LA   GLA+  +  + G +SG
Sbjct: 9   VAFLKAVFAEFLATLIFVFFGLGSALKWPSALPTILQIALA--FGLAIGTLAQALGPVSG 66

Query: 131 AHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFHPIM--GGGVTVPSAG 188
            H+NPA+T+A              Y+ AQ++ ++  A  L G+          V   +  
Sbjct: 67  GHINPAITLALLVGNQISLLRAFFYVAAQLVGAIAGAGILYGVAPLNARGNLAVNALNNN 126

Query: 189 Y--GEAFALEFIISFNLMFVVTAVATDTRA 216
              G+A  +E I++F L   + A     R 
Sbjct: 127 TTQGQAMVVELILTFQLALCIFASTDSRRT 156

>3d9s_A Aquaporin-5, AQP-5; aquaglyceroporin, membrane protein, water transport, X-RAY diffraction, lipid, phosphatidylserine, PSF, NPA, AR/R, water channel; HET: PS6; 2.00A {Homo sapiens} Length = 266

 Score = 48.9 bits (117), Expect = 2e-07
 Identities = 19/108 (17%), Positives = 39/108 (36%), Gaps = 4/108 (3%)

Query: 69  PPVSLARKVGAEFVGTLILIFAGTATAIVNQKTQGSETLIGLAGSTGLAVMVVILSTGHI 128
              +  + +  E + T  L       A  + +         L+   GL+V +  L   + 
Sbjct: 125 NNTTQGQAMVVELILTFQLAL--CIFASTDSRRTSPVGSPALS--IGLSVTLGHLVGIYF 180

Query: 129 SGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFHP 176
           +G  +NPA +   A + +       V+    I+ ++ AA     +  P
Sbjct: 181 TGCSMNPARSFGPAVVMNRFSPAHWVFWVGPIVGAVLAAILYFYLLFP 228

>1j4n_A Aquaporin 1; membrane protein, channel protein, transmembrane helices; HET: BNG; 2.20A {Bos taurus} SCOP: f.19.1.1 PDB: 1h6i_A 1fqy_A 1ih5_A Length = 271

 Score =  122 bits (308), Expect = 2e-34
 Identities = 43/156 (27%), Positives = 67/156 (42%), Gaps = 11/156 (7%)

Query: 72  SLARKVGAEFVGTLILIFAGTATAIVNQK-------TQGSETLIGLAGSTGLAVMVVILS 124
              R V AEF+  ++ IF    +A+           T   +  + ++ + GL++  +  S
Sbjct: 9   LFWRAVVAEFLAMILFIFISIGSALGFHYPIKSNQTTGAVQDNVKVSLAFGLSIATLAQS 68

Query: 125 TGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIF--HPIMGGGV 182
            GHISGAHLNPAVT+              +YI AQ + ++ A   L GI    P    G+
Sbjct: 69  VGHISGAHLNPAVTLGLLLSCQISVLRAIMYIIAQCVGAIVATAILSGITSSLPDNSLGL 128

Query: 183 TVPSAGY--GEAFALEFIISFNLMFVVTAVATDTRA 216
              + G   G+   +E I +  L+  V A     R 
Sbjct: 129 NALAPGVNSGQGLGIEIIGTLQLVLCVLATTDRRRR 164

>1j4n_A Aquaporin 1; membrane protein, channel protein, transmembrane helices; HET: BNG; 2.20A {Bos taurus} SCOP: f.19.1.1 PDB: 1h6i_A 1fqy_A 1ih5_A Length = 271

 Score = 49.7 bits (119), Expect = 2e-07
 Identities = 21/108 (19%), Positives = 44/108 (40%), Gaps = 5/108 (4%)

Query: 69  PPVSLARKVGAEFVGTLILIFAGTATAIVNQKTQGSETLIGLAGSTGLAVMVVILSTGHI 128
           P V+  + +G E +GTL L+      A  +++ +       LA   G +V +  L     
Sbjct: 133 PGVNSGQGLGIEIIGTLQLVL--CVLATTDRRRRDLGGSGPLA--IGFSVALGHLLAIDY 188

Query: 129 SGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFHP 176
           +G  +NPA +   +++    ++   ++     + +  A      I  P
Sbjct: 189 TGCGINPARSFG-SSVITHNFQDHWIFWVGPFIGAALAVLIYDFILAP 235

>3cn5_A Aquaporin; membrane protein, transmembrane, transport, transport protein; 2.05A {Spinacia oleracea} PDB: 3cn6_A 3cll_A 1z98_A 2b5f_A Length = 304

 Score =  122 bits (309), Expect = 4e-34
 Identities = 45/153 (29%), Positives = 69/153 (45%), Gaps = 8/153 (5%)

Query: 72  SLARKVGAEFVGTLILIFAGTATAIVNQKTQGSETLIGLAG---STGLAVMVVILSTGHI 128
           S  R   AEF+ TL+ ++   AT I + K       +GL G   + G  + V++  T  I
Sbjct: 59  SFWRAAIAEFIATLLFLYITVATVIGHSKETVVCGSVGLLGIAWAFGGMIFVLVYCTAGI 118

Query: 129 SGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIF---HPIMGGGVTVP 185
           SG H+NPAVT      +        VY+ AQ + ++C    +K      +   GGG    
Sbjct: 119 SGGHINPAVTFGLFLARKVELLRALVYMIAQCLGAICGVGLVKAFMKGPYNQFGGGANSV 178

Query: 186 SAGY--GEAFALEFIISFNLMFVVTAVATDTRA 216
           + GY  G A   E I +F L++ V +     R+
Sbjct: 179 ALGYNKGTALGAEIIGTFVLVYTVFSATDPKRS 211

>3cn5_A Aquaporin; membrane protein, transmembrane, transport, transport protein; 2.05A {Spinacia oleracea} PDB: 3cn6_A 3cll_A 1z98_A 2b5f_A Length = 304

 Score = 51.6 bits (124), Expect = 3e-08
 Identities = 23/113 (20%), Positives = 46/113 (40%), Gaps = 4/113 (3%)

Query: 67  PPPPVSLARKVGAEFVGTLILIFAGTATAIVNQKTQGSETLIGLAG-STGLAVMVVILST 125
                +    +GAE +GT +L++   +     +++     +  LA    G AV +V L+T
Sbjct: 178 VALGYNKGTALGAEIIGTFVLVYTVFSAT-DPKRSARDSHVPILAPLPIGFAVFMVHLAT 236

Query: 126 GHISGAHLNPAVTI--AFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFHP 176
             I+G  +NPA +   A     +  W    ++     + +  AA   + +   
Sbjct: 237 IPITGTGINPARSFGAAVIFNSNKVWDDQWIFWVGPFIGAAVAAAYHQYVLRA 289

>1ldf_A Glycerol uptake facilitator protein; glycerol-conducting membrane channel protein, transport PROT; HET: BOG; 2.10A {Escherichia coli} SCOP: f.19.1.1 PDB: 1fx8_A* 1lda_A* 1ldi_A* Length = 281

 Score =  117 bits (295), Expect = 2e-32
 Identities = 49/168 (29%), Positives = 76/168 (45%), Gaps = 22/168 (13%)

Query: 72  SLARKVGAEFVGTLILIFAGTATAIVNQKTQGSETLIGLAGSTGLAVMVVILSTGHISGA 131
           +L  +  AEF+GT +LIF G       +    S     ++   GL V + I  T  +SGA
Sbjct: 6   TLKGQCIAEFLGTGLLIFFGVGCVAALKVAGASFGQWEISVIFGLGVAMAIYLTAGVSGA 65

Query: 132 HLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFHP--------------- 176
           HLNPAVTIA      F  + V  +I +Q+  + CAA  + G+++                
Sbjct: 66  HLNPAVTIALWLFACFDKRKVIPFIVSQVAGAFCAAALVYGLYYNLFFDFEQTHHIVRGS 125

Query: 177 -----IMGGGVTVPSAGYG--EAFALEFIISFNLMFVVTAVATDTRAV 217
                + G   T P+      +AFA+E +I+  LM ++ A+  D   V
Sbjct: 126 VESVDLAGTFSTYPNPHINFVQAFAVEMVITAILMGLILALTDDGNGV 173

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	218
d1ymga1	234	f.19.1.1 (A:6-239) Aquaporin-0 {Cow (Bos taurus) [	7e-26
d1ymga1	234	f.19.1.1 (A:6-239) Aquaporin-0 {Cow (Bos taurus) [	1e-04
d1j4na_	249	f.19.1.1 (A:) Aquaporin-1 {Cow (Bos taurus) [TaxId	7e-24
d1j4na_	249	f.19.1.1 (A:) Aquaporin-1 {Cow (Bos taurus) [TaxId	6e-07
d1fx8a_	254	f.19.1.1 (A:) Glycerol uptake facilitator protein	2e-22
d1fx8a_	254	f.19.1.1 (A:) Glycerol uptake facilitator protein	2e-06
d1rc2a_	231	f.19.1.1 (A:) Aquaporin Z {Escherichia coli [TaxId	5e-18
d1rc2a_	231	f.19.1.1 (A:) Aquaporin Z {Escherichia coli [TaxId	4e-05

>d1ymga1 f.19.1.1 (A:6-239) Aquaporin-0 {Cow (Bos taurus) [TaxId: 9913]} Length = 234

class: Membrane and cell surface proteins and peptides
fold: Aquaporin-like
superfamily: Aquaporin-like
family: Aquaporin-like
domain: Aquaporin-0
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 98.2 bits (244), Expect = 7e-26
 Identities = 39/149 (26%), Positives = 64/149 (42%), Gaps = 6/149 (4%)

Query: 71  VSLARKVGAEFVGTLILIFAGTATAIVNQKTQGSETLIGLAGSTGLAVMVVILSTGHISG 130
            S  R + AEF  +L  +F G   ++           + LA   GLA+  ++ + GHISG
Sbjct: 2   ASFWRAICAEFFASLFYVFFGLGASLRWAPGPLHVLQVALA--FGLALATLVQAVGHISG 59

Query: 131 AHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFHPIM----GGGVTVPS 186
           AH+NPAVT AF             Y+ AQ++ ++  A  L  +  P +          P 
Sbjct: 60  AHVNPAVTFAFLVGSQMSLLRAICYMVAQLLGAVAGAAVLYSVTPPAVRGNLALNTLHPG 119

Query: 187 AGYGEAFALEFIISFNLMFVVTAVATDTR 215
              G+A  +E  ++   +  + A   + R
Sbjct: 120 VSVGQATIVEIFLTLQFVLCIFATYDERR 148

>d1ymga1 f.19.1.1 (A:6-239) Aquaporin-0 {Cow (Bos taurus) [TaxId: 9913]} Length = 234

class: Membrane and cell surface proteins and peptides
fold: Aquaporin-like
superfamily: Aquaporin-like
family: Aquaporin-like
domain: Aquaporin-0
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 39.3 bits (91), Expect = 1e-04
 Identities = 20/110 (18%), Positives = 42/110 (38%), Gaps = 5/110 (4%)

Query: 67  PPPPVSLARKVGAEFVGTLILIFAGTATAIVNQKTQGSETLIGLAGSTGLAVMVVILSTG 126
             P VS+ +    E   TL  +    AT    +  +     + +    G ++ +  L   
Sbjct: 116 LHPGVSVGQATIVEIFLTLQFVLCIFATYDERRNGRLGSVALAV----GFSLTLGHLFGM 171

Query: 127 HISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFHP 176
           + +GA +NPA + A  A+    + +  VY    ++ +   +     +  P
Sbjct: 172 YYTGAGMNPARSFA-PAILTRNFTNHWVYWVGPVIGAGLGSLLYDFLLFP 220

>d1j4na_ f.19.1.1 (A:) Aquaporin-1 {Cow (Bos taurus) [TaxId: 9913]} Length = 249

class: Membrane and cell surface proteins and peptides
fold: Aquaporin-like
superfamily: Aquaporin-like
family: Aquaporin-like
domain: Aquaporin-1
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 93.3 bits (231), Expect = 7e-24
 Identities = 43/155 (27%), Positives = 67/155 (43%), Gaps = 11/155 (7%)

Query: 72  SLARKVGAEFVGTLILIFAGTATAI-------VNQKTQGSETLIGLAGSTGLAVMVVILS 124
              R V AEF+  ++ IF    +A+        NQ T   +  + ++ + GL++  +  S
Sbjct: 9   LFWRAVVAEFLAMILFIFISIGSALGFHYPIKSNQTTGAVQDNVKVSLAFGLSIATLAQS 68

Query: 125 TGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFHPIMGGGV-- 182
            GHISGAHLNPAVT+              +YI AQ + ++ A   L GI   +    +  
Sbjct: 69  VGHISGAHLNPAVTLGLLLSCQISVLRAIMYIIAQCVGAIVATAILSGITSSLPDNSLGL 128

Query: 183 --TVPSAGYGEAFALEFIISFNLMFVVTAVATDTR 215
               P    G+   +E I +  L+  V A     R
Sbjct: 129 NALAPGVNSGQGLGIEIIGTLQLVLCVLATTDRRR 163

>d1j4na_ f.19.1.1 (A:) Aquaporin-1 {Cow (Bos taurus) [TaxId: 9913]} Length = 249

class: Membrane and cell surface proteins and peptides
fold: Aquaporin-like
superfamily: Aquaporin-like
family: Aquaporin-like
domain: Aquaporin-1
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 46.7 bits (110), Expect = 6e-07
 Identities = 21/108 (19%), Positives = 43/108 (39%), Gaps = 5/108 (4%)

Query: 69  PPVSLARKVGAEFVGTLILIFAGTATAIVNQKTQGSETLIGLAGSTGLAVMVVILSTGHI 128
           P V+  + +G E +GTL L+    AT    ++  G         + G +V +  L     
Sbjct: 133 PGVNSGQGLGIEIIGTLQLVLCVLATTDRRRRDLGGSG----PLAIGFSVALGHLLAIDY 188

Query: 129 SGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFHP 176
           +G  +NPA +   +++    ++   ++     + +  A      I  P
Sbjct: 189 TGCGINPARSFG-SSVITHNFQDHWIFWVGPFIGAALAVLIYDFILAP 235

>d1fx8a_ f.19.1.1 (A:) Glycerol uptake facilitator protein GlpF {Escherichia coli [TaxId: 562]} Length = 254

class: Membrane and cell surface proteins and peptides
fold: Aquaporin-like
superfamily: Aquaporin-like
family: Aquaporin-like
domain: Glycerol uptake facilitator protein GlpF
species: Escherichia coli [TaxId: 562]

 Score = 89.4 bits (221), Expect = 2e-22
 Identities = 49/168 (29%), Positives = 76/168 (45%), Gaps = 22/168 (13%)

Query: 72  SLARKVGAEFVGTLILIFAGTATAIVNQKTQGSETLIGLAGSTGLAVMVVILSTGHISGA 131
           +L  +  AEF+GT +LIF G       +    S     ++   GL V + I  T  +SGA
Sbjct: 1   TLKGQCIAEFLGTGLLIFFGVGCVAALKVAGASFGQWEISVIWGLGVAMAIYLTAGVSGA 60

Query: 132 HLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFHP--------------- 176
           HLNPAVTIA      F  + V  +I +Q+  + CAA  + G+++                
Sbjct: 61  HLNPAVTIALWLFACFDKRKVIPFIVSQVAGAFCAAALVYGLYYNLFFDFEQTHHIVRGS 120

Query: 177 -----IMGGGVTVPSAGY--GEAFALEFIISFNLMFVVTAVATDTRAV 217
                + G   T P+      +AFA+E +I+  LM ++ A+  D   V
Sbjct: 121 VESVDLAGTFSTYPNPHINFVQAFAVEMVITAILMGLILALTDDGNGV 168

>d1fx8a_ f.19.1.1 (A:) Glycerol uptake facilitator protein GlpF {Escherichia coli [TaxId: 562]} Length = 254

class: Membrane and cell surface proteins and peptides
fold: Aquaporin-like
superfamily: Aquaporin-like
family: Aquaporin-like
domain: Glycerol uptake facilitator protein GlpF
species: Escherichia coli [TaxId: 562]

 Score = 44.8 bits (105), Expect = 2e-06
 Identities = 23/123 (18%), Positives = 40/123 (32%), Gaps = 15/123 (12%)

Query: 64  CSLPPPPVSLARKVGAEFVGTLILIFAGTATAIVNQKTQGSETLIGLAGSTGLAVMVVIL 123
            + P P ++  +    E V T IL+    A                     GL + V+  
Sbjct: 131 STYPNPHINFVQAFAVEMVITAILMGLILALTDDGNGVPRGPL---APLLIGLLIAVIGA 187

Query: 124 STGHISGAHLNPAVTIA------------FAALKHFPWKHVPVYIGAQIMASLCAAFALK 171
           S G ++G  +NPA                 A        +  V +   I+ ++  AFA +
Sbjct: 188 SMGPLTGFAMNPARDFGPKVFAWLAGWGNVAFTGGRDIPYFLVPLFGPIVGAIVGAFAYR 247

Query: 172 GIF 174
            + 
Sbjct: 248 KLI 250

>d1rc2a_ f.19.1.1 (A:) Aquaporin Z {Escherichia coli [TaxId: 562]} Length = 231

class: Membrane and cell surface proteins and peptides
fold: Aquaporin-like
superfamily: Aquaporin-like
family: Aquaporin-like
domain: Aquaporin Z
species: Escherichia coli [TaxId: 562]

 Score = 77.1 bits (189), Expect = 5e-18
 Identities = 44/153 (28%), Positives = 65/153 (42%), Gaps = 14/153 (9%)

Query: 73  LARKVGAEFVGTLILIFAGTATAIVNQK-TQGSETLIGLAGSTGLAVMVVILSTGHISGA 131
           + RK+ AE  GT  L+F G  +A++     +      G+A + GL V+ +  + GHISG 
Sbjct: 1   MFRKLAAECFGTFWLVFGGCGSAVLAAGFPELGIGFAGVALAFGLTVLTMAFAVGHISGG 60

Query: 132 HLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFHPIMGGGVTVPSAG--- 188
           H NPAVTI   A   FP K V  Y+ AQ++  + AA  L  I     G            
Sbjct: 61  HFNPAVTIGLWAGGRFPAKEVVGYVIAQVVGGIVAAALLYLIASGKTGFDAAASGFASNG 120

Query: 189 ----------YGEAFALEFIISFNLMFVVTAVA 211
                        A  +E ++S   + V+    
Sbjct: 121 YGEHSPGGYSMLSALVVELVLSAGFLLVIHGAT 153

>d1rc2a_ f.19.1.1 (A:) Aquaporin Z {Escherichia coli [TaxId: 562]} Length = 231

class: Membrane and cell surface proteins and peptides
fold: Aquaporin-like
superfamily: Aquaporin-like
family: Aquaporin-like
domain: Aquaporin Z
species: Escherichia coli [TaxId: 562]

 Score = 40.9 bits (95), Expect = 4e-05
 Identities = 17/125 (13%), Positives = 39/125 (31%), Gaps = 7/125 (5%)

Query: 53  AIEDGRLPSVSCSLPPPPVSLARKVGAEFVGTLILIFAGTATAIVNQKTQGSETLIGLAG 112
           A   G   +      P   S+   +  E V +   +               +   IGLA 
Sbjct: 111 AAASGFASNGYGEHSPGGYSMLSALVVELVLSAGFLLVIHGATDKFAPAGFAPIAIGLA- 169

Query: 113 STGLAVMVVILSTGHISGAHLNPAVTIAFA-ALKHFPWKHVPVYIGAQIMASLCAAFALK 171
                + ++ L +  ++   +NPA + A A     +  + +  +    I+  +      +
Sbjct: 170 -----LTLIHLISIPVTNTSVNPARSTAVAIFQGGWALEQLWFFWVVPIVGGIIGGLIYR 224

Query: 172 GIFHP 176
            +   
Sbjct: 225 TLLEK 229

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	218
d1fx8a_	254	Glycerol uptake facilitator protein GlpF {Escheric	100.0
d1ymga1	234	Aquaporin-0 {Cow (Bos taurus) [TaxId: 9913]}	100.0
d1rc2a_	231	Aquaporin Z {Escherichia coli [TaxId: 562]}	100.0
d1j4na_	249	Aquaporin-1 {Cow (Bos taurus) [TaxId: 9913]}	100.0
d1fx8a_	254	Glycerol uptake facilitator protein GlpF {Escheric	99.86
d1ymga1	234	Aquaporin-0 {Cow (Bos taurus) [TaxId: 9913]}	99.81
d1rc2a_	231	Aquaporin Z {Escherichia coli [TaxId: 562]}	99.79
d1j4na_	249	Aquaporin-1 {Cow (Bos taurus) [TaxId: 9913]}	99.79

>d1fx8a_ f.19.1.1 (A:) Glycerol uptake facilitator protein GlpF {Escherichia coli [TaxId: 562]}

class: Membrane and cell surface proteins and peptides
fold: Aquaporin-like
superfamily: Aquaporin-like
family: Aquaporin-like
domain: Glycerol uptake facilitator protein GlpF
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1.4e-36  Score=203.29  Aligned_cols=146  Identities=33%  Similarity=0.431  Sum_probs=125.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCC
Q ss_conf             68999999999999999998744441024689842678899999999999996188986654248569999713787673
Q 027840           72 SLARKVGAEFVGTLILIFAGTATAIVNQKTQGSETLIGLAGSTGLAVMVVILSTGHISGAHLNPAVTIAFAALKHFPWKH  151 (218)
Q Consensus        72 ~l~~~~iaEfigTf~lvf~~~~~~~~~~~~~~~~~~~~~al~~Gl~v~~~i~~~g~iSGahlNPAvTla~~i~g~~~~~~  151 (218)
                      ++.|++++||+||++|+|.++++.......+...+...+++++|+++++.+++++++||+|+|||||+++++.|+++|.+
T Consensus         1 tl~~~~lAEflGT~~lvf~g~g~~~~~~~~~~~~~~~~ia~~~g~~v~~~i~~~g~vSGaH~NPAVTla~~i~g~~~~~~   80 (254)
T d1fx8a_           1 TLKGQCIAEFLGTGLLIFFGVGCVAALKVAGASFGQWEISVIWGLGVAMAIYLTAGVSGAHLNPAVTIALWLFACFDKRK   80 (254)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHHSCCCGGG
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEECHHHHHHHHHCCCCCHHH
T ss_conf             92669999999999999999999981102688764489999999999999999844564427715389999817886898


Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHHCCCC----------C----------CCCCCC--CCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             203643456669999999999723756----------8----------861468--865799999999999999999888
Q 027840          152 VPVYIGAQIMASLCAAFALKGIFHPIM----------G----------GGVTVP--SAGYGEAFALEFIISFNLMFVVTA  209 (218)
Q Consensus       152 ~~~yiiaQ~lGai~aa~~~~~i~~~~~----------~----------~~~t~p--~~s~~~~f~~E~i~Tf~L~~~il~  209 (218)
                      ...|+++|++|+++|+++.+.++++..          .          ..+|.|  +.+..++|+.|+++||+|+++++.
T Consensus        81 ~~~Yi~aQ~lGa~~ga~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~p~~~~s~~~~~~~E~v~Tf~lv~~il~  160 (254)
T d1fx8a_          81 VIPFIVSQVAGAFCAAALVYGLYYNLFFDFEQTHHIVRGSVESVDLAGTFSTYPNPHINFVQAFAVEMVITAILMGLILA  160 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCTTSGGGHHHHTTTSCCCCTTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf             68999999999999999999997555543214432125775413222410068986546898889999999999999998


Q ss_pred             HHCCCCCC
Q ss_conf             60479889
Q 027840          210 VATDTRAV  217 (218)
Q Consensus       210 va~d~r~~  217 (218)
                      ++.|+|+.
T Consensus       161 ~~~~~~~~  168 (254)
T d1fx8a_         161 LTDDGNGV  168 (254)
T ss_dssp             HHCTTSSS
T ss_pred             HHCCCCCC
T ss_conf             70476677

>d1ymga1 f.19.1.1 (A:6-239) Aquaporin-0 {Cow (Bos taurus) [TaxId: 9913]}

class: Membrane and cell surface proteins and peptides
fold: Aquaporin-like
superfamily: Aquaporin-like
family: Aquaporin-like
domain: Aquaporin-0
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=1.3e-35  Score=198.34  Aligned_cols=143  Identities=28%  Similarity=0.469  Sum_probs=124.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCC
Q ss_conf             36899999999999999999874444102468984267889999999999999618898665424856999971378767
Q 027840           71 VSLARKVGAEFVGTLILIFAGTATAIVNQKTQGSETLIGLAGSTGLAVMVVILSTGHISGAHLNPAVTIAFAALKHFPWK  150 (218)
Q Consensus        71 ~~l~~~~iaEfigTf~lvf~~~~~~~~~~~~~~~~~~~~~al~~Gl~v~~~i~~~g~iSGahlNPAvTla~~i~g~~~~~  150 (218)
                      .+++|++++||+||++++|.++++.....  .+..+.+.+++++|+++++.++.++++||+|+|||||+++++.|+++|.
T Consensus         2 ~s~~r~~laEf~GT~~lvf~g~gs~~~~~--~~~~~~~~ial~~G~~v~~~i~~~g~iSGaH~NPAVTla~~~~g~i~~~   79 (234)
T d1ymga1           2 ASFWRAICAEFFASLFYVFFGLGASLRWA--PGPLHVLQVALAFGLALATLVQAVGHISGAHVNPAVTFAFLVGSQMSLL   79 (234)
T ss_dssp             CTTHHHHHHHHHHHHHHHHHHHHHHCSCC---CHHHHHHHHHHHHHHHHHHHHHHTTTTCCCCSHHHHHHHHHTTSSCHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHCCC--CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCHH
T ss_conf             77999999999999999999999995157--8875329999999999999999984456671581366999860478745


Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHCCCCCC----CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf             320364345666999999999972375688----61468865799999999999999999888604798
Q 027840          151 HVPVYIGAQIMASLCAAFALKGIFHPIMGG----GVTVPSAGYGEAFALEFIISFNLMFVVTAVATDTR  215 (218)
Q Consensus       151 ~~~~yiiaQ~lGai~aa~~~~~i~~~~~~~----~~t~p~~s~~~~f~~E~i~Tf~L~~~il~va~d~r  215 (218)
                      +...|+++|++|+++|+++++.++++....    ..+.|+.+..++++.|++.|++|+++++.+..+++
T Consensus        80 ~~~~Yi~aQ~lGa~~ga~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~t~~lv~~i~~~~~~~~  148 (234)
T d1ymga1          80 RAICYMVAQLLGAVAGAAVLYSVTPPAVRGNLALNTLHPGVSVGQATIVEIFLTLQFVLCIFATYDERR  148 (234)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHSCTTTCTTTTCCCCCTTSCHHHHHHHHHHHHHHHHHHHHHHHCTTS
T ss_pred             HEEEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEECCCC
T ss_conf             545454667789999999999871851003555444676410368999999999999882115654876

>d1rc2a_ f.19.1.1 (A:) Aquaporin Z {Escherichia coli [TaxId: 562]}

class: Membrane and cell surface proteins and peptides
fold: Aquaporin-like
superfamily: Aquaporin-like
family: Aquaporin-like
domain: Aquaporin Z
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=9.5e-34  Score=188.83  Aligned_cols=144  Identities=34%  Similarity=0.467  Sum_probs=121.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHCCC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCC
Q ss_conf             8999999999999999998744441024-689842678899999999999996188986654248569999713787673
Q 027840           73 LARKVGAEFVGTLILIFAGTATAIVNQK-TQGSETLIGLAGSTGLAVMVVILSTGHISGAHLNPAVTIAFAALKHFPWKH  151 (218)
Q Consensus        73 l~~~~iaEfigTf~lvf~~~~~~~~~~~-~~~~~~~~~~al~~Gl~v~~~i~~~g~iSGahlNPAvTla~~i~g~~~~~~  151 (218)
                      ++|++++||+||++|+|.++++...... .+...++..+++++|+++++.++.++++||+|+|||+|++.++.|+++|.+
T Consensus         1 l~r~~~aEfiGT~llvf~g~gs~~~~~~~~~~~~~~~~ia~~~Gl~v~~~i~~~g~iSGaH~NPAVTla~~~~g~~~~~~   80 (231)
T d1rc2a_           1 MFRKLAAECFGTFWLVFGGCGSAVLAAGFPELGIGFAGVALAFGLTVLTMAFAVGHISGGHFNPAVTIGLWAGGRFPAKE   80 (231)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHSSCTTTCCHHHHHHHHHHHHHHHHHHHHTTTTCCCCSHHHHHHHHHTTCSCTTT
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCHHH
T ss_conf             91899999999999999999999962448887600899999999999999999730567657975107887368972787


Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHHCCCCCC------------CCCCC-CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf             20364345666999999999972375688------------61468-86579999999999999999988860479889
Q 027840          152 VPVYIGAQIMASLCAAFALKGIFHPIMGG------------GVTVP-SAGYGEAFALEFIISFNLMFVVTAVATDTRAV  217 (218)
Q Consensus       152 ~~~yiiaQ~lGai~aa~~~~~i~~~~~~~------------~~t~p-~~s~~~~f~~E~i~Tf~L~~~il~va~d~r~~  217 (218)
                      ...|+++|++|+++|+.+.+.++++....            ..+.| +.+..++++.|+++|++++++++.. +|+|+.
T Consensus        81 ~~~Yi~aQ~lGa~~g~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~i~t~~l~~~i~~~-~~~~~~  158 (231)
T d1rc2a_          81 VVGYVIAQVVGGIVAAALLYLIASGKTGFDAAASGFASNGYGEHSPGGYSMLSALVVELVLSAGFLLVIHGA-TDKFAP  158 (231)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHTTSTTCCHHHHCTTCCCCTTSSSSCCCHHHHHHHHHHHHHHHHHHHHHH-TSTTSC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH-HCCCCC
T ss_conf             999999999999999999999954665643223432014665568865422654378999999999987522-103576

>d1j4na_ f.19.1.1 (A:) Aquaporin-1 {Cow (Bos taurus) [TaxId: 9913]}

class: Membrane and cell surface proteins and peptides
fold: Aquaporin-like
superfamily: Aquaporin-like
family: Aquaporin-like
domain: Aquaporin-1
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=2.6e-34  Score=191.72  Aligned_cols=146  Identities=29%  Similarity=0.415  Sum_probs=123.9

Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-------CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
Q ss_conf             836899999999999999999874444102-------4689842678899999999999996188986654248569999
Q 027840           70 PVSLARKVGAEFVGTLILIFAGTATAIVNQ-------KTQGSETLIGLAGSTGLAVMVVILSTGHISGAHLNPAVTIAFA  142 (218)
Q Consensus        70 ~~~l~~~~iaEfigTf~lvf~~~~~~~~~~-------~~~~~~~~~~~al~~Gl~v~~~i~~~g~iSGahlNPAvTla~~  142 (218)
                      ++.+||++++||+|||+|+|.++++.....       ......+.+.+++++|+++++.++.++++||+|+|||+|++.+
T Consensus         7 ~~~~wr~~~aEf~gTfllvf~~~gs~~~~~~~~~~~~~~~~~~~~l~ial~~G~~v~~~i~~~g~iSGaH~NPAVTla~~   86 (249)
T d1j4na_           7 KKLFWRAVVAEFLAMILFIFISIGSALGFHYPIKSNQTTGAVQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLL   86 (249)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHGGGCCCSSCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEECCHHHHHHH
T ss_conf             38999999999999999999999999963301334666775310799999999999999998322443003723579998


Q ss_pred             HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC----CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf             71378767320364345666999999999972375688----614688657999999999999999998886047988
Q 027840          143 ALKHFPWKHVPVYIGAQIMASLCAAFALKGIFHPIMGG----GVTVPSAGYGEAFALEFIISFNLMFVVTAVATDTRA  216 (218)
Q Consensus       143 i~g~~~~~~~~~yiiaQ~lGai~aa~~~~~i~~~~~~~----~~t~p~~s~~~~f~~E~i~Tf~L~~~il~va~d~r~  216 (218)
                      +.|+++|.+...|+++|++|+++|+++.+.++++....    ..+.|+.+..+++..|+++|++|+++++.+. |+|+
T Consensus        87 ~~g~i~~~~~~~Yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~~l~~~i~~~~-~~~~  163 (249)
T d1j4na_          87 LSCQISVLRAIMYIIAQCVGAIVATAILSGITSSLPDNSLGLNALAPGVNSGQGLGIEIIGTLQLVLCVLATT-DRRR  163 (249)
T ss_dssp             HTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHTTTCTTCCTTCCCCCTTCCTTGGGHHHHHHHHHHHHHHHHHT-CSSC
T ss_pred             HCCCCCHHHEEEEEEHHHHHHHHHHHHHEEECCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHEEEC-CCCC
T ss_conf             6265326552111009877788877530000146433443301056887557899999999999998320310-3565

>d1fx8a_ f.19.1.1 (A:) Glycerol uptake facilitator protein GlpF {Escherichia coli [TaxId: 562]}

class: Membrane and cell surface proteins and peptides
fold: Aquaporin-like
superfamily: Aquaporin-like
family: Aquaporin-like
domain: Glycerol uptake facilitator protein GlpF
species: Escherichia coli [TaxId: 562]

Probab=99.86  E-value=8.9e-22  Score=127.50  Aligned_cols=111  Identities=20%  Similarity=0.154  Sum_probs=93.0

Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
Q ss_conf             02799983689999999999999999987444410246898426788999999999999961889866542485699997
Q 027840           64 CSLPPPPVSLARKVGAEFVGTLILIFAGTATAIVNQKTQGSETLIGLAGSTGLAVMVVILSTGHISGAHLNPAVTIAFAA  143 (218)
Q Consensus        64 ~~~~~~~~~l~~~~iaEfigTf~lvf~~~~~~~~~~~~~~~~~~~~~al~~Gl~v~~~i~~~g~iSGahlNPAvTla~~i  143 (218)
                      +..+.++.+..+.++.|+++||+|+++.+...+..++...   ....++.+|+.+...+.+.+++||+.+|||||+++++
T Consensus       131 ~t~p~~~~s~~~~~~~E~v~Tf~lv~~il~~~~~~~~~~~---~~~~~l~iG~~v~~~~~~~g~~TG~s~NPAR~lgpai  207 (254)
T d1fx8a_         131 STYPNPHINFVQAFAVEMVITAILMGLILALTDDGNGVPR---GPLAPLLIGLLIAVIGASMGPLTGFAMNPARDFGPKV  207 (254)
T ss_dssp             SCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHHCTTSSSCC---GGGHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
T ss_pred             ECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC---CCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
T ss_conf             0689865468988899999999999999987047667776---6666338999999998333345655568077788999


Q ss_pred             H------------CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf             1------------378767320364345666999999999972375
Q 027840          144 L------------KHFPWKHVPVYIGAQIMASLCAAFALKGIFHPI  177 (218)
Q Consensus       144 ~------------g~~~~~~~~~yiiaQ~lGai~aa~~~~~i~~~~  177 (218)
                      .            +...|.+.|+||++|++|+++|+++|+.++..+
T Consensus       208 ~~~~~~~~~~~~~~~~~~~~~wvy~vgP~~Ga~ia~~~y~~l~~~~  253 (254)
T d1fx8a_         208 FAWLAGWGNVAFTGGRDIPYFLVPLFGPIVGAIVGAFAYRKLIGRH  253 (254)
T ss_dssp             HHHHTTTTTHHHHTTCSSCTTHHHHHTTHHHHHHHHHHHHHHTGGG
T ss_pred             HHHHCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             9864255653466777777644576888999999999999998620

>d1ymga1 f.19.1.1 (A:6-239) Aquaporin-0 {Cow (Bos taurus) [TaxId: 9913]}

class: Membrane and cell surface proteins and peptides
fold: Aquaporin-like
superfamily: Aquaporin-like
family: Aquaporin-like
domain: Aquaporin-0
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.81  E-value=9.4e-20  Score=117.13  Aligned_cols=114  Identities=19%  Similarity=0.158  Sum_probs=92.8

Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH
Q ss_conf             63102799983689999999999999999987444410246898426788999999999999961889866542485699
Q 027840           61 SVSCSLPPPPVSLARKVGAEFVGTLILIFAGTATAIVNQKTQGSETLIGLAGSTGLAVMVVILSTGHISGAHLNPAVTIA  140 (218)
Q Consensus        61 ~~~~~~~~~~~~l~~~~iaEfigTf~lvf~~~~~~~~~~~~~~~~~~~~~al~~Gl~v~~~i~~~g~iSGahlNPAvTla  140 (218)
                      ........++.+..+.++.|+++|++|++..+...+.+++...    ...++.+|+.+.......+..||+.+||||+++
T Consensus       110 ~~~~~~~~~~~~~~~~~~~E~~~t~~lv~~i~~~~~~~~~~~~----~~~~l~ig~~v~~~~~~~~~~tG~~~NPAR~~g  185 (234)
T d1ymga1         110 NLALNTLHPGVSVGQATIVEIFLTLQFVLCIFATYDERRNGRL----GSVALAVGFSLTLGHLFGMYYTGAGMNPARSFA  185 (234)
T ss_dssp             TTTCCCCCTTSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCSCC----CCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
T ss_pred             CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCC----CCEEEEEHHHHHHHHHHHCCCCCCCCCCHHHHH
T ss_conf             5554446764103689999999999998821156548766767----652675338999999970335545454032215


Q ss_pred             HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf             997137876732036434566699999999997237568
Q 027840          141 FAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFHPIMG  179 (218)
Q Consensus       141 ~~i~g~~~~~~~~~yiiaQ~lGai~aa~~~~~i~~~~~~  179 (218)
                      +++... .|.+.|+||++|++|+++|+.+|+.++.+...
T Consensus       186 p~v~~~-~~~~~wiy~vgP~~Ga~laa~ly~~~~~~~~~  223 (234)
T d1ymga1         186 PAILTR-NFTNHWVYWVGPVIGAGLGSLLYDFLLFPRLK  223 (234)
T ss_dssp             HHHHHT-CCTTTTHHHHHHHHHHHHHHHHHHTTTSCCCC
T ss_pred             HHHHCC-CCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf             878566-86675100058889999999999998768876

>d1rc2a_ f.19.1.1 (A:) Aquaporin Z {Escherichia coli [TaxId: 562]}

class: Membrane and cell surface proteins and peptides
fold: Aquaporin-like
superfamily: Aquaporin-like
family: Aquaporin-like
domain: Aquaporin Z
species: Escherichia coli [TaxId: 562]

Probab=99.79  E-value=1.1e-19  Score=116.86  Aligned_cols=105  Identities=14%  Similarity=0.174  Sum_probs=86.1

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHC-
Q ss_conf             9998368999999999999999998744441024689842678899999999999996188986654248569999713-
Q 027840           67 PPPPVSLARKVGAEFVGTLILIFAGTATAIVNQKTQGSETLIGLAGSTGLAVMVVILSTGHISGAHLNPAVTIAFAALK-  145 (218)
Q Consensus        67 ~~~~~~l~~~~iaEfigTf~lvf~~~~~~~~~~~~~~~~~~~~~al~~Gl~v~~~i~~~g~iSGahlNPAvTla~~i~g-  145 (218)
                      .+...+..+.++.|+++|++++++.....+..+. +.     ..++.+|+.+...++..+++||+.+||||++++++.. 
T Consensus       125 ~~~~~~~~~~~~~E~i~t~~l~~~i~~~~~~~~~-~~-----~~~~~ig~~v~~~~~~~~~~tG~~~NPAr~~gp~i~~~  198 (231)
T d1rc2a_         125 SPGGYSMLSALVVELVLSAGFLLVIHGATDKFAP-AG-----FAPIAIGLALTLIHLISIPVTNTSVNPARSTAVAIFQG  198 (231)
T ss_dssp             SSSCCCHHHHHHHHHHHHHHHHHHHHHHTSTTSC-TT-----CHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHC
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC-CC-----CHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCC
T ss_conf             8865422654378999999999987522103576-65-----30159998888864312313776135376528999707


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf             78767320364345666999999999972375
Q 027840          146 HFPWKHVPVYIGAQIMASLCAAFALKGIFHPI  177 (218)
Q Consensus       146 ~~~~~~~~~yiiaQ~lGai~aa~~~~~i~~~~  177 (218)
                      ...|.+.|+||++|++|+++|+++|+.++.+.
T Consensus       199 ~~~~~~~wvy~~~P~~Ga~~a~~ly~~~~~~~  230 (231)
T d1rc2a_         199 GWALEQLWFFWVVPIVGGIIGGLIYRTLLEKR  230 (231)
T ss_dssp             SHHHHHTTHHHHHHHHHHHHHHHHHHHSSSCC
T ss_pred             CCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCC
T ss_conf             88655616876189999999999999980678

>d1j4na_ f.19.1.1 (A:) Aquaporin-1 {Cow (Bos taurus) [TaxId: 9913]}

class: Membrane and cell surface proteins and peptides
fold: Aquaporin-like
superfamily: Aquaporin-like
family: Aquaporin-like
domain: Aquaporin-1
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.79  E-value=2.1e-19  Score=115.31  Aligned_cols=114  Identities=20%  Similarity=0.275  Sum_probs=92.0

Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH
Q ss_conf             63102799983689999999999999999987444410246898426788999999999999961889866542485699
Q 027840           61 SVSCSLPPPPVSLARKVGAEFVGTLILIFAGTATAIVNQKTQGSETLIGLAGSTGLAVMVVILSTGHISGAHLNPAVTIA  140 (218)
Q Consensus        61 ~~~~~~~~~~~~l~~~~iaEfigTf~lvf~~~~~~~~~~~~~~~~~~~~~al~~Gl~v~~~i~~~g~iSGahlNPAvTla  140 (218)
                      ......+.++.+..+.++.|+++|++|+++.+...+.+++....    ..++.+|+.+.......+..||+.+||||+++
T Consensus       125 ~~~~~~~~~~~~~~~~~~~E~~~T~~l~~~i~~~~~~~~~~~~~----~~p~~ig~~v~~~~~~~~~~tG~~~NPAR~lg  200 (249)
T d1j4na_         125 SLGLNALAPGVNSGQGLGIEIIGTLQLVLCVLATTDRRRRDLGG----SGPLAIGFSVALGHLLAIDYTGCGINPARSFG  200 (249)
T ss_dssp             CTTCCCCCTTCCTTGGGHHHHHHHHHHHHHHHHHTCSSCCCCCS----CHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
T ss_pred             CCCCEECCCCCCHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCC----CCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH
T ss_conf             43301056887557899999999999998320310356577787----76148999999998742554586357154315


Q ss_pred             HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf             997137876732036434566699999999997237568
Q 027840          141 FAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFHPIMG  179 (218)
Q Consensus       141 ~~i~g~~~~~~~~~yiiaQ~lGai~aa~~~~~i~~~~~~  179 (218)
                      +++... .|.++|+||++|++|+++|+++|+.++.+...
T Consensus       201 p~i~~~-~~~~~wvy~vgP~iGa~la~~~y~~~~~p~~~  238 (249)
T d1j4na_         201 SSVITH-NFQDHWIFWVGPFIGAALAVLIYDFILAPRSS  238 (249)
T ss_dssp             HHHHTT-CCTTTTHHHHHHHHHHHHHHHHHHTTTSCCSS
T ss_pred             HHHHCC-CCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf             888555-76676654327889999999999993378889