Citrus Sinensis ID: 027981

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210------

MRPKQVFVANHTSMIDFIILEQMTAFAVIMQKHPGWVGLLQSTILESVGCIWFNRSEAKDREIVARKLRDHVQGTDNNPLLIFPEGTCVNNHYTVMFKKGAFELGCTVCPVAIKYNKIFVDAFWNSRKQSFTMHLLQLMTSWAVVCDVWYLEPQTLRPGETAIEFAERVRDIISVRAGLKKVPWDGYLKYSRPSPKHRERKQQSFAESVLRRLDEK

ccccEEEEEccccHHHHHHHHHccccEEEEEccccccccHHHHHHHHHccEEEEccccHHHHHHHHHHHHHHHccccccEEEEccEEEEcccEEccccccccccccEEEEEEEEEccccccEEcccccccHHHHHHHHHccccEEEEEEEcccccccccccHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHHHHccc

cccccEEEEccccccEEEEEEcccccHEEEEcccccHHHHHHHHHHHcccEEEEcccHHHHHHHHHHHHHHHcccccccEEEEccccEEccEEEEEEccccEcccccEEEEEEEEcccccccEEcccccHHHHHHHHHHHHHHHEEEEEEcccccccccccHHHHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHHHHHHccc

MRPKQVFVANHTSMIDFIILEQMTAFAVIMQkhpgwvglLQSTILESVGCiwfnrseakDREIVARKLRdhvqgtdnnpllifpegtcvnnhyTVMFKKGAFELGCTVCPVAIKYNKIFVDAFWNSRKQSFTMHLLQLMTSWAVVCDvwylepqtlrpgetAIEFAERVRDIISVRAglkkvpwdgylkysrpspkhrerKQQSFAESVLRRLDEK

MRPKQVFVANHTSMIDFIILEQMTAFAVIMQKHPGWVGLLQSTILESVGCIWFNRSEAKDREIVARKlrdhvqgtdnnpllifpeGTCVNNHYTVMFKKGAFELGCTVCPVAIKYNKIFVDAFWNSRKQSFTMHLLQLMTSWAVVCDVWYLEPQTLRPGETAIEFAERVRDIISvraglkkvpwdgylkysrpspkhrerkqqsfaesvlrrldek

*****VFVANHTSMIDFIILEQMTAFAVIMQKHPGWVGLLQSTILESVGCIWFNRSEAKDREIVARKLRDHVQGTDNNPLLIFPEGTCVNNHYTVMFKKGAFELGCTVCPVAIKYNKIFVDAFWNSRKQSFTMHLLQLMTSWAVVCDVWYLEPQTLRPGETAIEFAERVRDIISVRAGLKKVPWDGYLKY**************************

*RPKQVFVANHTSMIDFIILEQMTAFAVIMQKHPGWVGLLQSTILESVGCIWF***************RDHVQGTDNNPLLIFPEGTCVNNHYTVMFKKGAFELGCTVCPVAIKYNKIFVDAFWNSRKQSFTMHLLQLMTSWAVVCDVWYLEPQTLRP*ETAIEFAERVRDIISVRAGLKKVPWDGYLK********************LRR****

*RPKQVFVANHTSMIDFIILEQMTAFAVIMQKHPGWVGLLQSTILESVGCIWFNRSEAKDREIVARKLRDHVQGTDNNPLLIFPEGTCVNNHYTVMFKKGAFELGCTVCPVAIKYNKIFVDAFWNSRKQSFTMHLLQLMTSWAVVCDVWYLEPQTLRPGETAIEFAERVRDIISVRAGLKKVPWDGYLKYSRPSPKHRERKQQSFAESVLRR****

oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii

oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii

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no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		216	2.2.26 [Sep-21-2011]
Q4V8J4		457	Glycerol-3-phosphate acyl	yes	no	0.967	0.457	0.464	6e-57
Q8C0N2		438	Glycerol-3-phosphate acyl	yes	no	0.967	0.477	0.464	7e-57
Q53EU6		434	Glycerol-3-phosphate acyl	yes	no	0.967	0.481	0.459	2e-56
A3KGT9		443	Glycerol-3-phosphate acyl	yes	no	0.967	0.471	0.483	2e-55
Q5ZLL8		446	Glycerol-3-phosphate acyl	yes	no	0.953	0.461	0.470	2e-55
Q6DG38		449	Glycerol-3-phosphate acyl	no	no	0.967	0.465	0.469	9e-55
A3FPG8		456	Glycerol-3-phosphate acyl	no	no	0.967	0.458	0.473	3e-54
Q68F37		446	Glycerol-3-phosphate acyl	N/A	no	0.949	0.459	0.468	9e-54
Q86UL3		456	Glycerol-3-phosphate acyl	no	no	0.967	0.458	0.469	9e-54
Q5R6J7		456	Glycerol-3-phosphate acyl	no	no	0.967	0.458	0.469	1e-53

>sp\|Q4V8J4\|GPAT3_RAT Glycerol-3-phosphate acyltransferase 3 OS=Rattus norvegicus GN=Agpat9 PE=2 SV=1	Back alignment and function desciption

 Score =  220 bits (560), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 98/211 (46%), Positives = 149/211 (70%), Gaps = 2/211 (0%)

Query: 2   RPKQ--VFVANHTSMIDFIILEQMTAFAVIMQKHPGWVGLLQSTILESVGCIWFNRSEAK 59
           RP++  + VANHTS ID +IL     +A++ Q H G +G++Q  ++++   +WF RSE K
Sbjct: 218 RPQKGGICVANHTSPIDVLILATDGCYAMVGQVHGGLMGIIQRAMVKACPHVWFERSEIK 277

Query: 60  DREIVARKLRDHVQGTDNNPLLIFPEGTCVNNHYTVMFKKGAFELGCTVCPVAIKYNKIF 119
           DR +V ++L++H+      P+LIFPEGTC+NN   +MFKKG+FE+G T+ PVAIKYN  F
Sbjct: 278 DRHLVTKRLKEHIADKKKLPILIFPEGTCINNTSVMMFKKGSFEIGGTIYPVAIKYNPQF 337

Query: 120 VDAFWNSRKQSFTMHLLQLMTSWAVVCDVWYLEPQTLRPGETAIEFAERVRDIISVRAGL 179
            DAFWNS K +   +LL++MTSWA+VCDVWY+ P T   GE A++FA RV+  I+V+ GL
Sbjct: 338 GDAFWNSSKYNLVSYLLRIMTSWAIVCDVWYMPPMTREEGEDAVQFANRVKSAIAVQGGL 397

Query: 180 KKVPWDGYLKYSRPSPKHRERKQQSFAESVL 210
            ++PWDG LK ++     +E +Q+++++ ++
Sbjct: 398 TELPWDGGLKRAKVKDTFKEEQQKTYSKMIV 428

Esterifies acyl-group from acyl-ACP to the sn-1 position of glycerol-3-phosphate, an essential step in glycerolipid biosynthesis.
Rattus norvegicus (taxid: 10116)
EC: 2EC: .EC: 3EC: .EC: 1EC: .EC: 1EC: 5

>sp\|Q8C0N2\|GPAT3_MOUSE Glycerol-3-phosphate acyltransferase 3 OS=Mus musculus GN=Agpat9 PE=1 SV=1	Back alignment and function description

>sp\|Q53EU6\|GPAT3_HUMAN Glycerol-3-phosphate acyltransferase 3 OS=Homo sapiens GN=AGPAT9 PE=1 SV=2	Back alignment and function description

>sp\|A3KGT9\|GPT3L_DANRE Glycerol-3-phosphate acyltransferase 3-like OS=Danio rerio GN=agpat9l PE=3 SV=1	Back alignment and function description

>sp\|Q5ZLL8\|GPAT3_CHICK Glycerol-3-phosphate acyltransferase 3 OS=Gallus gallus GN=AGPAT9 PE=2 SV=1	Back alignment and function description

>sp\|Q6DG38\|GPAT3_DANRE Glycerol-3-phosphate acyltransferase 3 OS=Danio rerio GN=agpat9 PE=2 SV=1	Back alignment and function description

>sp\|A3FPG8\|GPAT4_BOVIN Glycerol-3-phosphate acyltransferase 4 OS=Bos taurus GN=AGPAT6 PE=3 SV=1	Back alignment and function description

>sp\|Q68F37\|GPAT3_XENLA Glycerol-3-phosphate acyltransferase 3 OS=Xenopus laevis GN=agpat9 PE=2 SV=1	Back alignment and function description

>sp\|Q86UL3\|GPAT4_HUMAN Glycerol-3-phosphate acyltransferase 4 OS=Homo sapiens GN=AGPAT6 PE=1 SV=1	Back alignment and function description

>sp\|Q5R6J7\|GPAT4_PONAB Glycerol-3-phosphate acyltransferase 4 OS=Pongo abelii GN=AGPAT6 PE=2 SV=2	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		216
170676822		375	putative lysophosphatidic acid acyltrans	1.0	0.576	0.958	1e-121
253509571		375	putative glycerol-3-phosphate acyltransf	1.0	0.576	0.953	1e-121
147836329		376	hypothetical protein VITISV_025520 [Viti	0.995	0.571	0.948	1e-120
356530756		431	PREDICTED: glycerol-3-phosphate acyltran	0.995	0.498	0.958	1e-120
225428163		376	PREDICTED: glycerol-3-phosphate acyltran	0.995	0.571	0.944	1e-120
319904081		375	sn-glycerol-3-phosphate acyltransferase	1.0	0.576	0.949	1e-119
357479629		376	Glycerol-3-phosphate acyltransferase [Me	0.995	0.571	0.953	1e-119
388509046		238	unknown [Lotus japonicus]	0.995	0.903	0.944	1e-118
9759326		359	unnamed protein product [Arabidopsis tha	1.0	0.601	0.916	1e-118
18424377		376	glycerol-3-phosphate acyltransferase 9 [	1.0	0.574	0.916	1e-117

>gi\|170676822\|gb\|ACB30546.1\| putative lysophosphatidic acid acyltransferase [Ricinus communis]	Back alignment and taxonomy information

 Score =  439 bits (1128), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 207/216 (95%), Positives = 212/216 (98%)

Query: 1   MRPKQVFVANHTSMIDFIILEQMTAFAVIMQKHPGWVGLLQSTILESVGCIWFNRSEAKD 60
           +RPKQVFVANHTSMIDFI+LEQMTAFAVIMQKHPGWVGLLQSTILESVGCIWFNRSEAKD
Sbjct: 160 IRPKQVFVANHTSMIDFIVLEQMTAFAVIMQKHPGWVGLLQSTILESVGCIWFNRSEAKD 219

Query: 61  REIVARKLRDHVQGTDNNPLLIFPEGTCVNNHYTVMFKKGAFELGCTVCPVAIKYNKIFV 120
           REIVA+KLRDHVQG DNNPLLIFPEGTCVNNHYTVMFKKGAFELGCTVCP+AIKYNKIFV
Sbjct: 220 REIVAKKLRDHVQGADNNPLLIFPEGTCVNNHYTVMFKKGAFELGCTVCPIAIKYNKIFV 279

Query: 121 DAFWNSRKQSFTMHLLQLMTSWAVVCDVWYLEPQTLRPGETAIEFAERVRDIISVRAGLK 180
           DAFWNSRKQSFT HLLQLMTSWAVVCDVWYLEPQ LRPGET IEFAERVRDIISVRAGLK
Sbjct: 280 DAFWNSRKQSFTTHLLQLMTSWAVVCDVWYLEPQNLRPGETPIEFAERVRDIISVRAGLK 339

Query: 181 KVPWDGYLKYSRPSPKHRERKQQSFAESVLRRLDEK 216
           KVPWDGYLKYSRPSPKHRERKQQSFAESVLRRL+EK
Sbjct: 340 KVPWDGYLKYSRPSPKHRERKQQSFAESVLRRLEEK 375

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|253509571\|gb\|ACT32030.1\| putative glycerol-3-phosphate acyltransferase [Vernicia fordii] gi\|308743347\|gb\|ADO40099.1\| glycerol-3-phosphate acyltransferase 9 [Vernicia fordii]	Back alignment and taxonomy information

>gi\|147836329\|emb\|CAN62196.1\| hypothetical protein VITISV_025520 [Vitis vinifera]	Back alignment and taxonomy information

>gi\|356530756\|ref\|XP_003533946.1\| PREDICTED: glycerol-3-phosphate acyltransferase 3-like [Glycine max]	Back alignment and taxonomy information

>gi\|225428163\|ref\|XP_002281458.1\| PREDICTED: glycerol-3-phosphate acyltransferase 3 [Vitis vinifera] gi\|297744532\|emb\|CBI37794.3\| unnamed protein product [Vitis vinifera]	Back alignment and taxonomy information

>gi\|319904081\|gb\|ADV77219.1\| sn-glycerol-3-phosphate acyltransferase [Jatropha curcas]	Back alignment and taxonomy information

>gi\|357479629\|ref\|XP_003610100.1\| Glycerol-3-phosphate acyltransferase [Medicago truncatula] gi\|355511155\|gb\|AES92297.1\| Glycerol-3-phosphate acyltransferase [Medicago truncatula] gi\|388496448\|gb\|AFK36290.1\| unknown [Medicago truncatula]	Back alignment and taxonomy information

>gi\|388509046\|gb\|AFK42589.1\| unknown [Lotus japonicus]	Back alignment and taxonomy information

>gi\|9759326\|dbj\|BAB09835.1\| unnamed protein product [Arabidopsis thaliana]	Back alignment and taxonomy information

>gi\|18424377\|ref\|NP_568925.1\| glycerol-3-phosphate acyltransferase 9 [Arabidopsis thaliana] gi\|26452748\|dbj\|BAC43455.1\| unknown protein [Arabidopsis thaliana] gi\|29824119\|gb\|AAP04020.1\| unknown protein [Arabidopsis thaliana] gi\|253509573\|gb\|ACT32031.1\| AtGPAT9 [Arabidopsis thaliana] gi\|332009975\|gb\|AED97358.1\| glycerol-3-phosphate acyltransferase 9 [Arabidopsis thaliana]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		216
TAIR\|locus:2175791		376	GPAT9 "glycerol-3-phosphate ac	1.0	0.574	0.916	2.6e-109
DICTYBASE\|DDB_G0274969		488	DDB_G0274969 "putative lysopho	1.0	0.442	0.555	3.1e-67
MGI\|MGI:3603816		438	Agpat9 "1-acylglycerol-3-phosp	0.967	0.477	0.464	1.5e-53
RGD\|1565703		457	Agpat9 "1-acylglycerol-3-phosp	0.967	0.457	0.464	1.5e-53
UNIPROTKB\|E1BGF8		438	AGPAT9 "Uncharacterized protei	0.967	0.477	0.469	2.4e-53
UNIPROTKB\|F1RW11		438	AGPAT9 "Uncharacterized protei	0.967	0.477	0.469	3e-53
UNIPROTKB\|Q53EU6		434	AGPAT9 "Glycerol-3-phosphate a	0.967	0.481	0.459	3.8e-53
UNIPROTKB\|E2RRI3		433	AGPAT9 "Uncharacterized protei	0.967	0.482	0.459	4.9e-53
WB\|WBGene00018657		617	acl-4 [Caenorhabditis elegans	0.953	0.333	0.485	4.9e-53
UNIPROTKB\|F1NYF4		399	AGPAT9 "Glycerol-3-phosphate a	0.953	0.516	0.470	3.5e-52

TAIR\|locus:2175791 GPAT9 "glycerol-3-phosphate acyltransferase 9" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

 Score = 1080 (385.2 bits), Expect = 2.6e-109, P = 2.6e-109
 Identities = 198/216 (91%), Positives = 211/216 (97%)

Query:     1 MRPKQVFVANHTSMIDFIILEQMTAFAVIMQKHPGWVGLLQSTILESVGCIWFNRSEAKD 60
             +RPKQV+VANHTSMIDFI+LEQMTAFAVIMQKHPGWVGLLQSTILESVGCIWFNRSEAKD
Sbjct:   161 IRPKQVYVANHTSMIDFIVLEQMTAFAVIMQKHPGWVGLLQSTILESVGCIWFNRSEAKD 220

Query:    61 REIVARKLRDHVQGTDNNPLLIFPEGTCVNNHYTVMFKKGAFELGCTVCPVAIKYNKIFV 120
             REIVA+KLRDHVQG D+NPLLIFPEGTCVNN+YTVMFKKGAFEL CTVCP+AIKYNKIFV
Sbjct:   221 REIVAKKLRDHVQGADSNPLLIFPEGTCVNNNYTVMFKKGAFELDCTVCPIAIKYNKIFV 280

Query:   121 DAFWNSRKQSFTMHLLQLMTSWAVVCDVWYLEPQTLRPGETAIEFAERVRDIISVRAGLK 180
             DAFWNSRKQSFTMHLLQLMTSWAVVC+VWYLEPQT+RPGET IEFAERVRD+IS+RAGLK
Sbjct:   281 DAFWNSRKQSFTMHLLQLMTSWAVVCEVWYLEPQTIRPGETGIEFAERVRDMISLRAGLK 340

Query:   181 KVPWDGYLKYSRPSPKHRERKQQSFAESVLRRLDEK 216
             KVPWDGYLKYSRPSPKH ERKQQSFAES+L RL+EK
Sbjct:   341 KVPWDGYLKYSRPSPKHSERKQQSFAESILARLEEK 376

GO:0005634 "nucleus" evidence=ISM

GO:0008152 "metabolic process" evidence=IEA;ISS

GO:0016746 "transferase activity, transferring acyl groups" evidence=IEA;ISS

GO:0006651 "diacylglycerol biosynthetic process" evidence=ISS

GO:0019432 "triglyceride biosynthetic process" evidence=ISS

GO:0005886 "plasma membrane" evidence=IDA

GO:0016020 "membrane" evidence=IDA

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0006301 "postreplication repair" evidence=RCA

GO:0006655 "phosphatidylglycerol biosynthetic process" evidence=RCA

DICTYBASE\|DDB_G0274969 DDB_G0274969 "putative lysophosphatidic acid acyltransferase" [Dictyostelium discoideum (taxid:44689)]	Back alignment and assigned GO terms

MGI\|MGI:3603816 Agpat9 "1-acylglycerol-3-phosphate O-acyltransferase 9" [Mus musculus (taxid:10090)]	Back alignment and assigned GO terms

RGD\|1565703 Agpat9 "1-acylglycerol-3-phosphate O-acyltransferase 9" [Rattus norvegicus (taxid:10116)]	Back alignment and assigned GO terms

UNIPROTKB\|E1BGF8 AGPAT9 "Uncharacterized protein" [Bos taurus (taxid:9913)]	Back alignment and assigned GO terms

UNIPROTKB\|F1RW11 AGPAT9 "Uncharacterized protein" [Sus scrofa (taxid:9823)]	Back alignment and assigned GO terms

UNIPROTKB\|Q53EU6 AGPAT9 "Glycerol-3-phosphate acyltransferase 3" [Homo sapiens (taxid:9606)]	Back alignment and assigned GO terms

UNIPROTKB\|E2RRI3 AGPAT9 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]	Back alignment and assigned GO terms

WB\|WBGene00018657 acl-4 [Caenorhabditis elegans (taxid:6239)]	Back alignment and assigned GO terms

UNIPROTKB\|F1NYF4 AGPAT9 "Glycerol-3-phosphate acyltransferase 3" [Gallus gallus (taxid:9031)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	2.3.1.15	LOW CONFIDENCE prediction!
3rd Layer	2.3.1	0.691
3rd Layer	2.3.1.42	LOW CONFIDENCE prediction!
3rd Layer	2.3.1.51	LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		216
PLN02833		376	PLN02833, PLN02833, glycerol acyltransferase famil	1e-173
cd07991		211	cd07991, LPLAT_LPCAT1-like, Lysophospholipid Acylt	1e-90
pfam01553		131	pfam01553, Acyltransferase, Acyltransferase	2e-23
smart00563		118	smart00563, PlsC, Phosphate acyltransferases	7e-20
cd07989		184	cd07989, LPLAT_AGPAT-like, Lysophospholipid Acyltr	8e-13
COG0204		255	COG0204, PlsC, 1-acyl-sn-glycerol-3-phosphate acyl	1e-07
TIGR00530		130	TIGR00530, AGP_acyltrn, 1-acyl-sn-glycerol-3-phosp	1e-06
cd06551		187	cd06551, LPLAT, Lysophospholipid acyltransferases	7e-06

>gnl\|CDD\|215447 PLN02833, PLN02833, glycerol acyltransferase family protein	Back alignment and domain information

 Score =  479 bits (1234), Expect = e-173
 Identities = 193/215 (89%), Positives = 205/215 (95%)

Query: 2   RPKQVFVANHTSMIDFIILEQMTAFAVIMQKHPGWVGLLQSTILESVGCIWFNRSEAKDR 61
           RPKQVFVANHTSMIDFI+LEQMT FAVIMQKHPGWVG LQ+TILESVGCIWFNR+EAKDR
Sbjct: 162 RPKQVFVANHTSMIDFIVLEQMTPFAVIMQKHPGWVGFLQNTILESVGCIWFNRTEAKDR 221

Query: 62  EIVARKLRDHVQGTDNNPLLIFPEGTCVNNHYTVMFKKGAFELGCTVCPVAIKYNKIFVD 121
           E+VA+KLRDHVQ  D NPLLIFPEGTCVNN YTVMFKKGAFELGCTVCP+AIKYNKIFVD
Sbjct: 222 EVVAKKLRDHVQDPDRNPLLIFPEGTCVNNEYTVMFKKGAFELGCTVCPIAIKYNKIFVD 281

Query: 122 AFWNSRKQSFTMHLLQLMTSWAVVCDVWYLEPQTLRPGETAIEFAERVRDIISVRAGLKK 181
           AFWNSRKQSFTMHLL+LMTSWAVVCDVWYLEPQTLRPGET IEFAERVRD+I+ RAGLKK
Sbjct: 282 AFWNSRKQSFTMHLLRLMTSWAVVCDVWYLEPQTLRPGETPIEFAERVRDMIAKRAGLKK 341

Query: 182 VPWDGYLKYSRPSPKHRERKQQSFAESVLRRLDEK 216
           VPWDGYLKY RPSPKH E+KQQSFAES+LRRL+EK
Sbjct: 342 VPWDGYLKYYRPSPKHTEKKQQSFAESLLRRLEEK 376

Length = 376

>gnl\|CDD\|153253 cd07991, LPLAT_LPCAT1-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LPCAT1-like	Back alignment and domain information

>gnl\|CDD\|216567 pfam01553, Acyltransferase, Acyltransferase	Back alignment and domain information

>gnl\|CDD\|214724 smart00563, PlsC, Phosphate acyltransferases	Back alignment and domain information

>gnl\|CDD\|153251 cd07989, LPLAT_AGPAT-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: AGPAT-like	Back alignment and domain information

>gnl\|CDD\|223282 COG0204, PlsC, 1-acyl-sn-glycerol-3-phosphate acyltransferase [Lipid metabolism]	Back alignment and domain information

>gnl\|CDD\|129621 TIGR00530, AGP_acyltrn, 1-acyl-sn-glycerol-3-phosphate acyltransferases	Back alignment and domain information

>gnl\|CDD\|153244 cd06551, LPLAT, Lysophospholipid acyltransferases (LPLATs) of glycerophospholipid biosynthesis	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		216
PLN02833		376	glycerol acyltransferase family protein	100.0
cd07991		211	LPLAT_LPCAT1-like Lysophospholipid Acyltransferase	100.0
KOG2848		276	consensus 1-acyl-sn-glycerol-3-phosphate acyltrans	100.0
PRK15018		245	1-acyl-sn-glycerol-3-phosphate acyltransferase; Pr	99.97
PTZ00261		355	acyltransferase; Provisional	99.96
cd07993		205	LPLAT_DHAPAT-like Lysophospholipid Acyltransferase	99.95
PLN02901		214	1-acyl-sn-glycerol-3-phosphate acyltransferase	99.95
PLN02499		498	glycerol-3-phosphate acyltransferase	99.94
PLN02588		525	glycerol-3-phosphate acyltransferase	99.94
cd07988		163	LPLAT_ABO13168-like Lysophospholipid Acyltransfera	99.94
PLN02177		497	glycerol-3-phosphate acyltransferase	99.93
cd07992		203	LPLAT_AAK14816-like Lysophospholipid Acyltransfera	99.93
cd07986		210	LPLAT_ACT14924-like Lysophospholipid Acyltransfera	99.92
PRK03355		783	glycerol-3-phosphate acyltransferase; Validated	99.9
PRK08043		718	bifunctional acyl-[acyl carrier protein] synthetas	99.9
COG0204		255	PlsC 1-acyl-sn-glycerol-3-phosphate acyltransferas	99.9
PRK06814		1140	acylglycerophosphoethanolamine acyltransferase; Pr	99.88
cd07987		212	LPLAT_MGAT-like Lysophospholipid Acyltransferases	99.88
PRK08633		1146	2-acyl-glycerophospho-ethanolamine acyltransferase	99.87
TIGR03703		799	plsB glycerol-3-phosphate O-acyltransferase. Membe	99.87
cd07983		189	LPLAT_DUF374-like Lysophospholipid Acyltransferase	99.87
PRK04974		818	glycerol-3-phosphate acyltransferase; Validated	99.86
cd07985		235	LPLAT_GPAT Lysophospholipid Acyltransferases (LPLA	99.86
PF01553		132	Acyltransferase: Acyltransferase; InterPro: IPR002	99.85
PRK14014		301	putative acyltransferase; Provisional	99.85
TIGR00530		130	AGP_acyltrn 1-acyl-sn-glycerol-3-phosphate acyltra	99.85
cd06551		187	LPLAT Lysophospholipid acyltransferases (LPLATs) o	99.84
PTZ00374		1108	dihydroxyacetone phosphate acyltransferase; Provis	99.84
smart00563		118	PlsC Phosphate acyltransferases. Function in phosp	99.83
PLN02783		315	diacylglycerol O-acyltransferase	99.82
PRK11915		621	glycerol-3-phosphate acyltransferase; Reviewed	99.79
KOG2898		354	consensus Predicted phosphate acyltransferase, con	99.78
cd07989		184	LPLAT_AGPAT-like Lysophospholipid Acyltransferases	99.78
cd07990		193	LPLAT_LCLAT1-like Lysophospholipid Acyltransferase	99.77
PLN02510		374	probable 1-acyl-sn-glycerol-3-phosphate acyltransf	99.75
PLN02380		376	1-acyl-sn-glycerol-3-phosphate acyltransferase	99.74
cd07984		192	LPLAT_LABLAT-like Lysophospholipid Acyltransferase	99.7
KOG2847		286	consensus Phosphate acyltransferase [Lipid transpo	99.67
COG2937		810	PlsB Glycerol-3-phosphate O-acyltransferase [Lipid	99.4
KOG4666		412	consensus Predicted phosphate acyltransferase, con	99.39
KOG3729		715	consensus Mitochondrial glycerol-3-phosphate acylt	99.34
KOG1505		346	consensus Lysophosphatidic acid acyltransferase LP	99.31
COG2121		214	Uncharacterized protein conserved in bacteria [Fun	99.29
KOG3730		685	consensus Acyl-CoA:dihydroxyactetone-phosphate acy	99.14
PRK08419		298	lipid A biosynthesis lauroyl acyltransferase; Revi	98.69
PRK07920		298	lipid A biosynthesis lauroyl acyltransferase; Prov	98.59
PLN02349		426	glycerol-3-phosphate acyltransferase	98.39
PF03279		295	Lip_A_acyltrans: Bacterial lipid A biosynthesis ac	98.36
COG1560		308	HtrB Lauroyl/myristoyl acyltransferase [Cell envel	97.67
PRK06946		293	lipid A biosynthesis lauroyl acyltransferase; Prov	97.61
PRK08734		305	lipid A biosynthesis lauroyl acyltransferase; Prov	97.57
PRK05646		310	lipid A biosynthesis lauroyl acyltransferase; Prov	97.55
PRK08943		314	lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA ac	97.51
PRK06553		308	lipid A biosynthesis lauroyl acyltransferase; Prov	97.49
PRK08905		289	lipid A biosynthesis lauroyl acyltransferase; Vali	97.43
PRK06860		309	lipid A biosynthesis lauroyl acyltransferase; Prov	97.42
PRK08706		289	lipid A biosynthesis lauroyl acyltransferase; Prov	97.42
TIGR02207		303	lipid_A_htrB lipid A biosynthesis lauroyl (or palm	97.41
PRK06628		290	lipid A biosynthesis lauroyl acyltransferase; Prov	97.38
PRK08733		306	lipid A biosynthesis lauroyl acyltransferase; Prov	97.38
TIGR02208		305	lipid_A_msbB lipid A biosynthesis (KDO)2-(lauroyl)	97.3
PRK05645		295	lipid A biosynthesis lauroyl acyltransferase; Prov	97.14
PRK05906		454	lipid A biosynthesis lauroyl acyltransferase; Prov	97.05
PRK08025		305	lipid A biosynthesis palmitoleoyl acyltransferase;	96.7
PF03982		297	DAGAT: Diacylglycerol acyltransferase ; InterPro:	96.3
COG3176		292	Putative hemolysin [General function prediction on	96.01
PRK15174		656	Vi polysaccharide export protein VexE; Provisional	95.79
KOG4666		412	consensus Predicted phosphate acyltransferase, con	95.27
PF04028		74	DUF374: Domain of unknown function (DUF374); Inter	95.12

>PLN02833 glycerol acyltransferase family protein	Back alignment and domain information

Probab=100.00  E-value=4.5e-46  Score=313.31  Aligned_cols=215  Identities=90%  Similarity=1.471  Sum_probs=198.4

Q ss_pred             CCCeEEEeCCCchhHHHHHHHhcceEEEEecCCcchhhhHHHHHhhcCeEEEeCCCchhHHHHHHHHHHHHhcCCCCCeE
Q 027981            2 RPKQVFVANHTSMIDFIILEQMTAFAVIMQKHPGWVGLLQSTILESVGCIWFNRSEAKDREIVARKLRDHVQGTDNNPLL   81 (216)
Q Consensus         2 ~~~~iiv~NH~S~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~v~r~~~~~~~~~~~~~~~~l~~~~g~~l~   81 (216)
                      +++.|+||||+|++|++++.+..|..++++++..+.+++.+++++..|+++|||++..+.....+.+.+++++++|.+|+
T Consensus       162 ~~~~IiVaNH~S~lDi~vL~s~~p~~~v~kk~~~~~~~~~~~~~~~~g~I~VdR~~~~~~~~~~~~l~~~l~~~~G~~ll  241 (376)
T PLN02833        162 RPKQVFVANHTSMIDFIVLEQMTPFAVIMQKHPGWVGFLQNTILESVGCIWFNRTEAKDREVVAKKLRDHVQDPDRNPLL  241 (376)
T ss_pred             CCCEEEEECCCChHHHHHHHhhcCceEEEEehhhhhHHHHHHHHHHcCcEEecCCCHHHHHHHHHHHHHHHHhcCCCEEE
Confidence            45799999999999999999988888888888877776777999999999999987777777788888888754689999


Q ss_pred             EecccceeCCceeeccccccccCCCceEEEEEEcccccccccccCCCchHHHHHHHHhhccceEEEEEeecccCCCCCCC
Q 027981           82 IFPEGTCVNNHYTVMFKKGAFELGCTVCPVAIKYNKIFVDAFWNSRKQSFTMHLLQLMTSWAVVCDVWYLEPQTLRPGET  161 (216)
Q Consensus        82 iFPEGt~s~~~~l~~fk~Ga~~~~~pIvPv~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~pi~~~~~~~  161 (216)
                      |||||||++++.+.+||+|+|.+++||+||+|.|+..+.+.+|+..+.++..+++++++.+...++|+|++|++..++++
T Consensus       242 IFPEGTrs~~~~l~~FK~Gaf~~g~pI~PVaI~y~~~~~~~fW~s~~~s~~~~l~~ll~~~~~~v~V~~LpPi~~~~~e~  321 (376)
T PLN02833        242 IFPEGTCVNNEYTVMFKKGAFELGCTVCPIAIKYNKIFVDAFWNSRKQSFTMHLLRLMTSWAVVCDVWYLEPQTLRPGET  321 (376)
T ss_pred             EEcCccccCCCcccccchhhHhcCCeEEEEEEEecCcccccccCCCCccHHHhHHHHhCCCceEEEEEECCCcCCCCCCC
Confidence            99999999999999999999999999999999998877788998767789999999999999999999999998877889


Q ss_pred             HHHHHHHHHHHHHHHcCCCcCCCcccccccCCChhHHHHHHHHHHHHHHhhhccC
Q 027981          162 AIEFAERVRDIISVRAGLKKVPWDGYLKYSRPSPKHRERKQQSFAESVLRRLDEK  216 (216)
Q Consensus       162 ~~~~~~~v~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (216)
                      ++++++++++.|++.++.+..+|||++||++|.+++.+++|+.+++.+++++.+|
T Consensus       322 ~~efA~rv~~~Ia~~lgi~~~~wdg~lk~~~~~~~~~~~~~~~~~~~~~~~~~~~  376 (376)
T PLN02833        322 PIEFAERVRDMIAKRAGLKKVPWDGYLKYYRPSPKHTEKKQQSFAESLLRRLEEK  376 (376)
T ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCceeecCCChHHHHHHHHHHHHHHHHhcCCC
Confidence            9999999999999999999999999999999999999999999999999999886

>cd07991 LPLAT_LPCAT1-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LPCAT1-like	Back alignment and domain information

>KOG2848 consensus 1-acyl-sn-glycerol-3-phosphate acyltransferase [Lipid transport and metabolism]	Back alignment and domain information

>PRK15018 1-acyl-sn-glycerol-3-phosphate acyltransferase; Provisional	Back alignment and domain information

>PTZ00261 acyltransferase; Provisional	Back alignment and domain information

>cd07993 LPLAT_DHAPAT-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: GPAT-like	Back alignment and domain information

>PLN02901 1-acyl-sn-glycerol-3-phosphate acyltransferase	Back alignment and domain information

>PLN02499 glycerol-3-phosphate acyltransferase	Back alignment and domain information

>PLN02588 glycerol-3-phosphate acyltransferase	Back alignment and domain information

>cd07988 LPLAT_ABO13168-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: Unknown ABO13168	Back alignment and domain information

>PLN02177 glycerol-3-phosphate acyltransferase	Back alignment and domain information

>cd07992 LPLAT_AAK14816-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: Unknown AAK14816-like	Back alignment and domain information

>cd07986 LPLAT_ACT14924-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: Unknown ACT14924	Back alignment and domain information

>PRK03355 glycerol-3-phosphate acyltransferase; Validated	Back alignment and domain information

>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated	Back alignment and domain information

>COG0204 PlsC 1-acyl-sn-glycerol-3-phosphate acyltransferase [Lipid metabolism]	Back alignment and domain information

>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional	Back alignment and domain information

>cd07987 LPLAT_MGAT-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: MGAT-like	Back alignment and domain information

>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated	Back alignment and domain information

>TIGR03703 plsB glycerol-3-phosphate O-acyltransferase	Back alignment and domain information

>cd07983 LPLAT_DUF374-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: DUF374	Back alignment and domain information

>PRK04974 glycerol-3-phosphate acyltransferase; Validated	Back alignment and domain information

>cd07985 LPLAT_GPAT Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: GPAT	Back alignment and domain information

>PF01553 Acyltransferase: Acyltransferase; InterPro: IPR002123 This family contains acyltransferases involved in phospholipid biosynthesis and other proteins of unknown function []	Back alignment and domain information

>PRK14014 putative acyltransferase; Provisional	Back alignment and domain information

>TIGR00530 AGP_acyltrn 1-acyl-sn-glycerol-3-phosphate acyltransferases	Back alignment and domain information

>cd06551 LPLAT Lysophospholipid acyltransferases (LPLATs) of glycerophospholipid biosynthesis	Back alignment and domain information

>PTZ00374 dihydroxyacetone phosphate acyltransferase; Provisional	Back alignment and domain information

>smart00563 PlsC Phosphate acyltransferases	Back alignment and domain information

>PLN02783 diacylglycerol O-acyltransferase	Back alignment and domain information

>PRK11915 glycerol-3-phosphate acyltransferase; Reviewed	Back alignment and domain information

>KOG2898 consensus Predicted phosphate acyltransferase, contains PlsC domain [Lipid transport and metabolism]	Back alignment and domain information

>cd07989 LPLAT_AGPAT-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: AGPAT-like	Back alignment and domain information

>cd07990 LPLAT_LCLAT1-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LCLAT1-like	Back alignment and domain information

>PLN02510 probable 1-acyl-sn-glycerol-3-phosphate acyltransferase	Back alignment and domain information

>PLN02380 1-acyl-sn-glycerol-3-phosphate acyltransferase	Back alignment and domain information

>cd07984 LPLAT_LABLAT-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LABLAT-like	Back alignment and domain information

>KOG2847 consensus Phosphate acyltransferase [Lipid transport and metabolism]	Back alignment and domain information

>COG2937 PlsB Glycerol-3-phosphate O-acyltransferase [Lipid metabolism]	Back alignment and domain information

>KOG4666 consensus Predicted phosphate acyltransferase, contains PlsC domain [Lipid transport and metabolism]	Back alignment and domain information

>KOG3729 consensus Mitochondrial glycerol-3-phosphate acyltransferase GPAT [Lipid transport and metabolism]	Back alignment and domain information

>KOG1505 consensus Lysophosphatidic acid acyltransferase LPAAT and related acyltransferases [Lipid transport and metabolism]	Back alignment and domain information

>COG2121 Uncharacterized protein conserved in bacteria [Function unknown]	Back alignment and domain information

>KOG3730 consensus Acyl-CoA:dihydroxyactetone-phosphate acyltransferase DHAPAT [Lipid transport and metabolism]	Back alignment and domain information

>PRK08419 lipid A biosynthesis lauroyl acyltransferase; Reviewed	Back alignment and domain information

>PRK07920 lipid A biosynthesis lauroyl acyltransferase; Provisional	Back alignment and domain information

>PLN02349 glycerol-3-phosphate acyltransferase	Back alignment and domain information

>PF03279 Lip_A_acyltrans: Bacterial lipid A biosynthesis acyltransferase; InterPro: IPR004960 Bacterial lipopolysachharides (LPS) are glycolipids that make up the outer monolayer of the outer membranes of most Gram-negative bacteria	Back alignment and domain information

>COG1560 HtrB Lauroyl/myristoyl acyltransferase [Cell envelope biogenesis, outer membrane]	Back alignment and domain information

>PRK06946 lipid A biosynthesis lauroyl acyltransferase; Provisional	Back alignment and domain information

>PRK08734 lipid A biosynthesis lauroyl acyltransferase; Provisional	Back alignment and domain information

>PRK05646 lipid A biosynthesis lauroyl acyltransferase; Provisional	Back alignment and domain information

>PRK08943 lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase; Validated	Back alignment and domain information

>PRK06553 lipid A biosynthesis lauroyl acyltransferase; Provisional	Back alignment and domain information

>PRK08905 lipid A biosynthesis lauroyl acyltransferase; Validated	Back alignment and domain information

>PRK06860 lipid A biosynthesis lauroyl acyltransferase; Provisional	Back alignment and domain information

>PRK08706 lipid A biosynthesis lauroyl acyltransferase; Provisional	Back alignment and domain information

>TIGR02207 lipid_A_htrB lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase	Back alignment and domain information

>PRK06628 lipid A biosynthesis lauroyl acyltransferase; Provisional	Back alignment and domain information

>PRK08733 lipid A biosynthesis lauroyl acyltransferase; Provisional	Back alignment and domain information

>TIGR02208 lipid_A_msbB lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase	Back alignment and domain information

>PRK05645 lipid A biosynthesis lauroyl acyltransferase; Provisional	Back alignment and domain information

>PRK05906 lipid A biosynthesis lauroyl acyltransferase; Provisional	Back alignment and domain information

>PRK08025 lipid A biosynthesis palmitoleoyl acyltransferase; Reviewed	Back alignment and domain information

>PF03982 DAGAT: Diacylglycerol acyltransferase ; InterPro: IPR007130 The terminal step of triacylglycerol (TAG) formation is catalysed by the enzyme diacylglycerol acyltransferase (DAGAT) [, ]	Back alignment and domain information

>COG3176 Putative hemolysin [General function prediction only]	Back alignment and domain information

>PRK15174 Vi polysaccharide export protein VexE; Provisional	Back alignment and domain information

>KOG4666 consensus Predicted phosphate acyltransferase, contains PlsC domain [Lipid transport and metabolism]	Back alignment and domain information

>PF04028 DUF374: Domain of unknown function (DUF374); InterPro: IPR007172 This is a bacterial domain of unknown function	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		216
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-05

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

 Score = 43.7 bits (102), Expect = 2e-05
 Identities = 38/239 (15%), Positives = 71/239 (29%), Gaps = 60/239 (25%)

Query: 4   KQVFVANHTSMIDFIILEQMTAFAVIMQKHPGWVGL-----------LQSTILESVGCIW 52
           K     +    + + +  +M  F +       W+ L           +   +L  +   W
Sbjct: 163 KTWVALD--VCLSYKVQCKM-DFKIF------WLNLKNCNSPETVLEMLQKLLYQIDPNW 213

Query: 53  FNRSEAKDR-----EIVARKLRDHVQGTD-NNPLLIFPEGTCVNNHYTVMFKKGAFELGC 106
            +RS+           +  +LR  ++     N LL+      V N         AF L C
Sbjct: 214 TSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLN---VQNAKAW----NAFNLSC 266

Query: 107 TVCPVAIKYNKIFVDAFWNSRKQSFTM-HLLQLMT---SWAVVCDVWYLEPQTLRPGETA 162
            +  +     K   D    +     ++ H    +T     +++       PQ L      
Sbjct: 267 KI--LLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLT 324

Query: 163 IE------FAERVRDIISVRAGLKKVPWDGYLKYSRPSPKHRERKQQSFAESVLRRLDE 215
                    AE +RD ++         WD +   +         K  +  ES L  L+ 
Sbjct: 325 TNPRRLSIIAESIRDGLAT--------WDNWKHVNCD-------KLTTIIESSLNVLEP 368

PyMOL of 1vt4

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Alignment Graph	Length	Definition	Probability
Query		216
1iuq_A		367	Glycerol-3-phosphate acyltransferase; open twisted	99.87

>1iuq_A Glycerol-3-phosphate acyltransferase; open twisted alpha/beta, four helix bundle; 1.55A {Cucurbita moschata} SCOP: c.112.1.1 PDB: 1k30_A	Back alignment and structure

Probab=99.87  E-value=2.5e-23  Score=171.59  Aligned_cols=169  Identities=10%  Similarity=0.099  Sum_probs=114.8

Q ss_pred             CCCeEEEeCCCchhHHHHHHHhc---------ceEEEEecCCcch---hhhHHHHHhhcCeEEE----e------CCCch
Q 027981            2 RPKQVFVANHTSMIDFIILEQMT---------AFAVIMQKHPGWV---GLLQSTILESVGCIWF----N------RSEAK   59 (216)
Q Consensus         2 ~~~~iiv~NH~S~~D~~~l~~~~---------~~~~~~~~~~~~~---~~~~~~~~~~~g~i~v----~------r~~~~   59 (216)
                      ++++|++|||+|.+|++++..++         ++.++++++....   .|+ +.+ +.++||+.    +      |++.+
T Consensus       129 ~~~vIfisNHQS~~D~~vi~~~l~~~~~~l~~~~~fVAk~eL~~~Pl~~Pf-s~g-~~l~cI~~kk~id~~p~l~r~~~r  206 (367)
T 1iuq_A          129 GHNVVLISNHQTEADPAIISLLLEKTNPYIAENTIFVAGDRVLADPLCKPF-SIG-RNLICVYSKKHMFDIPELTETKRK  206 (367)
T ss_dssp             TCEEEEEECCCCTTHHHHHHHHHTTTCHHHHHHCEEEECTHHHHCTTTHHH-HHT-SEEEECCCGGGTTSSGGGHHHHHH
T ss_pred             CCcEEEEECCccchhHHHHHHHHhhcccccccceEEEeehhhhcCccccch-hhh-hheeeEEecccCCCcchhhhhhhH
Confidence            57999999999999999999887         4688888776422   122 444 55667775    4      54445


Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEEecccceeCC----cee--eccccccc----c----CCCc--eEEEEEEccccccccc
Q 027981           60 DREIVARKLRDHVQGTDNNPLLIFPEGTCVNN----HYT--VMFKKGAF----E----LGCT--VCPVAIKYNKIFVDAF  123 (216)
Q Consensus        60 ~~~~~~~~~~~~l~~~~g~~l~iFPEGt~s~~----~~l--~~fk~Ga~----~----~~~p--IvPv~i~~~~~~~~~~  123 (216)
                      ....+++++.+.+++ +|.+|+|||||||+++    +.+  .+|++|+|    .    +++|  |+|++|.....+..+ 
T Consensus       207 ~n~ksl~~~~~~Lk~-GG~sI~IFPEGTRsR~~~~~g~l~~~~Fk~gs~~~~~~LA~ksg~P~hIvPvaI~t~~imppp-  284 (367)
T 1iuq_A          207 ANTRSLKEMALLLRG-GSQLIWIAPSGGRDRPDPSTGEWYPAPFDASSVDNMRRLIQHSDVPGHLFPLALLCHDIMPPP-  284 (367)
T ss_dssp             HHHHHHHHHHHHHHH-CCCEEEECTTCSCCCBCTTTCCBCCCCCCHHHHHHHHHHHHTSSSCEEEEEEEEECGGGSCCC-
T ss_pred             HHHHHHHHHHHHHHc-CCeEEEEeCCCCCCCCCCCCCccccccccchhhhHHHHHHHHcCCCceEEEEEEEeccccCCc-
Confidence            567778888888885 4779999999999995    444  45999988    3    4999  999999943333211 


Q ss_pred             ccCCCchHHHHHHHHhhccceEEEEEeecccCCCC----CC----CHHHHHHHHHHHHHHHcCC
Q 027981          124 WNSRKQSFTMHLLQLMTSWAVVCDVWYLEPQTLRP----GE----TAIEFAERVRDIISVRAGL  179 (216)
Q Consensus       124 ~~~~~~~~~~~~~~~~~~~~~~i~v~~~~pi~~~~----~~----~~~~~~~~v~~~i~~~l~~  179 (216)
                           ...-..++.-....++.+.|++|+||+.++    .+    ..+++++.+++.|++.+..
T Consensus       285 -----~~ve~~~g~~r~i~~~~V~v~ig~pI~~~~l~~~~e~~~e~~~~l~e~v~~~I~~~y~~  343 (367)
T 1iuq_A          285 -----SQVEIEIGEKRVIAFNGAGLSVAPEISFEEIAATHKNPEEVREAYSKALFDSVAMQYNV  343 (367)
T ss_dssp             ---------------CCCCCBCCEEEECCCCCHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             -----ccccccccccceeecccEEEEECCccchhhccccccchHHHHHHHHHHHHHHHHHHHHH
Confidence                 000011111001234679999999998653    12    2446888889988877743

PyMOL of 1iuq

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	Probability
Query		216
d1iuqa_		367	Glycerol-3-phosphate (1)-acyltransferase {Cushaw s	99.82

>d1iuqa_ c.112.1.1 (A:) Glycerol-3-phosphate (1)-acyltransferase {Cushaw squash (Cucurbita moschata) [TaxId: 3662]}	Back information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Glycerol-3-phosphate (1)-acyltransferase
superfamily: Glycerol-3-phosphate (1)-acyltransferase
family: Glycerol-3-phosphate (1)-acyltransferase
domain: Glycerol-3-phosphate (1)-acyltransferase
species: Cushaw squash (Cucurbita moschata) [TaxId: 3662]

Probab=99.82  E-value=1.1e-20  Score=155.53  Aligned_cols=164  Identities=11%  Similarity=0.074  Sum_probs=107.1

Q ss_pred             CCCeEEEeCCCchhHHHHHHHhcc---------eEEEEecCCcchhhhHHHHHhhcCeEEEeCCCc------------hh
Q 027981            2 RPKQVFVANHTSMIDFIILEQMTA---------FAVIMQKHPGWVGLLQSTILESVGCIWFNRSEA------------KD   60 (216)
Q Consensus         2 ~~~~iiv~NH~S~~D~~~l~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~g~i~v~r~~~------------~~   60 (216)
                      .+++|++|||+|++|++++..++.         ..|+++++. +..|++++++...|+|+|+|.+.            +.
T Consensus       129 g~nVIlvSNHqS~~D~~il~~ll~~~~~~l~r~i~f~Ak~~l-~~~Pl~~~f~~~~g~I~V~rk~~i~~~p~l~~~~~~~  207 (367)
T d1iuqa_         129 GHNVVLISNHQTEADPAIISLLLEKTNPYIAENTIFVAGDRV-LADPLCKPFSIGRNLICVYSKKHMFDIPELTETKRKA  207 (367)
T ss_dssp             TCEEEEEECCCCTTHHHHHHHHHTTTCHHHHHHCEEEECTHH-HHCTTTHHHHHTSEEEECCCGGGTTSSGGGHHHHHHH
T ss_pred             CCCEEEEECCcccccHHHHHHHHhccccccccceEEEeehhh-hccHHHHHHHHhCCEEEEeccccccccccccchhhhh
Confidence            568999999999999999876642         356555454 56679999999999999987532            12


Q ss_pred             HHHHHHHHHHHHhcCCCCCeEEecccceeC----Cceee--cccccc----c----cCCCc--eEEEEEEcccccccccc
Q 027981           61 REIVARKLRDHVQGTDNNPLLIFPEGTCVN----NHYTV--MFKKGA----F----ELGCT--VCPVAIKYNKIFVDAFW  124 (216)
Q Consensus        61 ~~~~~~~~~~~l~~~~g~~l~iFPEGt~s~----~~~l~--~fk~Ga----~----~~~~p--IvPv~i~~~~~~~~~~~  124 (216)
                      ....++++.+.+++ +|..|+|||||||++    ++.+.  +|+++.    +    ..++|  |+|++|.+...+..+  
T Consensus       208 ~~~al~~~~~lL~~-Gg~~v~IfPEGTRsr~~~~dg~l~p~~F~~~~~~~~~~LA~~sgvP~hV~Pvai~~~d~~pP~--  284 (367)
T d1iuqa_         208 NTRSLKEMALLLRG-GSQLIWIAPSGGRDRPDPSTGEWYPAPFDASSVDNMRRLIQHSDVPGHLFPLALLCHDIMPPP--  284 (367)
T ss_dssp             HHHHHHHHHHHHHH-CCCEEEECTTCSCCCBCTTTCCBCCCCCCHHHHHHHHHHHHTSSSCEEEEEEEEECGGGSCCC--
T ss_pred             hhHHHHHHHHHhhc-CCeEEEEeccCcccCcccccccccccccCccchHHHHHHHhcCCCCceEechhhhcccccCCC--
Confidence            34567777888875 356788999999995    34443  576664    2    35999  999999986654321  


Q ss_pred             cCCCchHHHHHHHHhhccceEEEEEeecccCCCC----CCCHHHHHHHHHHHH
Q 027981          125 NSRKQSFTMHLLQLMTSWAVVCDVWYLEPQTLRP----GETAIEFAERVRDII  173 (216)
Q Consensus       125 ~~~~~~~~~~~~~~~~~~~~~i~v~~~~pi~~~~----~~~~~~~~~~v~~~i  173 (216)
                          ......++..-......+.|.+|+||+..+    .++..+..+...+.|
T Consensus       285 ----~~v~~~ige~R~~~~~~V~i~~G~pId~~~~~~~~~~~~e~~ea~~k~l  333 (367)
T d1iuqa_         285 ----SQVEIEIGEKRVIAFNGAGLSVAPEISFEEIAATHKNPEEVREAYSKAL  333 (367)
T ss_dssp             --------------CCCCCBCCEEEECCCCCHHHHHHTSSSHHHHHHHHHHHH
T ss_pred             ----cccccchhhccccCCCceeEEeCCCcchhhhhhhccchHHHHHHHHHHH
Confidence                111122222222234568999999997653    345544443333333

PyMOL of d1iuqa_