Citrus Sinensis ID: 028082

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210----
Protein Sequence
MKASLKGRYETDKDRGVAAATVAFNAGDVKLRASLTDATVVNGPSLNGLALAVEKPGFFIVDYNVPKKDFRFQFMNSVRVADKPLNLTYIHGRGDNRTILEGTLVFDSANKVSANHVLGSGNCKLKYTYVHGGLTTFEQWYDLAKNSWDFAVSRKVYGDDMFRASYQTSSKALALEWSRNSKINGDFKIQAALNLAEELRVPKLTAESTWNFEM
Secondary Structure (PSIPRED)
cccEEcEEEEccccccEEEEEEEEEcccEEEEEEEEEEEEEcccccccEEEEEEcccEEEEEEEcccccEEEEEEEEEEEccEEEEEEEEEEccccEEEEEEEEEEEccccEEEEEEEccccEEEEEEEEEccEEEEEEEcccccccccEEEEEEEccccEEEEEEEEcccEEEEEEEEcccccccEEEEEEEEccHHccccEEEEEEEEcccc
Secondary Structure Prediction (SSPRO)
ccEEEEEEEccccccEEEEEEEEcccccEEEEEEEcccEEcccccccEEEEEEEcccEEEEEccccccccEEEEEcEEEEccccEEEEEEEccccccEEEEEEEEEEccccEEEEEEEcccccEEEEEEEccccEEEcccccccccccEEEEEEEcccccEEEEEEEccccEEEEEEEccccccccEEEEEEEcccccccccEEEEEEEEEEcc
Coil and Loop (DISEMBL)
mkaslkgryetdkdrGVAAATVAFNAGDVKLRasltdatvvngpslnglalavekpgffivdynvpkkdfrFQFMnsvrvadkplnltyihgrgdnrtileGTLVfdsankvsanhvlgsgncklkYTYVHGGLTTFEQWYDLAKNSWDFAVSRkvygddmfrasYQTSSKALALEWsrnskingDFKIQAALNLAEelrvpkltaestwnfem
Flexible Loop (DISEMBL)
mkaslkgryetdkdrgvaAATVAFNAGDVKLRASLTDATVVNGPSLNGLALAVEKPGFFIVDYNVPKKDFRFQFMNSVRVADKPLNLTYIHGRGDNRTILEGTLVFDSANKVSANHVLGSGNCKLKYTYVHGGLTTFEQWYDLAKNSWDFAVSRKVYGDDMFRASYQTSSKALALEWSRNSKINGDFKIQAAlnlaeelrvpkltaestwnfem
Low Complexity Region (SEG)
MKASLKGRYETDKDRGVAAATVAFNAGDVKLRASLTDATVVNGPSLNGLALAVEKPGFFIVDYNVPKKDFRFQFMNSVRVADKPLNLTYIHGRGDNRTILEGTLVFDSANKVSANHVLGSGNCKLKYTYVHGGLTTFEQWYDLAKNSWDFAVSRKVYGDDMFRASYQTSSKALALEWSRNSKINGDFKIQAALNLAEELRVPKLTAESTWNFEM
Disordered region (IsUnstruct)
****************VAAATVAFNAGDVKLRASLTDATVVNGPSLNGLALAVEKPGFFIVDYNVPKKDFRFQFMNSVRVADKPLNLTYIHGRGDNRTILEGTLVFDSANKVSANHVLGSGNCKLKYTYVHGGLTTFEQWYDLAKNSWDFAVSRKVYGDDMFRASYQTSSKALALEWSRNSKINGDFKIQAALNLAEELRVPKL**********
Disordered Region (DISOPRED)
******G*********VAAATVAFNAGDVKLRASLTDATVVNGPSLNGLALAVEKPGFFIVDYNVPKKDFRFQFMNSVRVADKPLNLTYIHGRGDNRTILEGTLVFDSANKVSANHVLGSGNCKLKYTYVHGGLTTFEQWYDLAKNSWDFAVSRKVYGDDMFRASYQTSSKALALEWSRNSKINGDFKIQAALNLAEELRVPKLTAESTWNFEM
Disordered Region (DISEMBL)
MKASLKGRYETDKDRGVAAATVAFNAGDVKLRASLTDATVVNGPSLNGLALAVEKPGFFIVDYNVPKKDFRFQFMNSVRVADKPLNLTYIHGRGDNRTILEGTLVFDSANKVSANHVLGSGNCKLKYTYVHGGLTTFEQWYDLAKNSWDFAVSRKVYGDDMFRASYQTSSKALALEWSRNSKINGDFKIQAALNLAEELRVPKLTAESTWNFEM
Disordered Region (DISPRO)
MKASLKGRYETDKDRGVAAATVAFNAGDVKLRASLTDATVVNGPSLNGLALAVEKPGFFIVDYNVPKKDFRFQFMNSVRVADKPLNLTYIHGRGDNRTILEGTLVFDSANKVSANHVLGSGNCKLKYTYVHGGLTTFEQWYDLAKNSWDFAVSRKVYGDDMFRASYQTSSKALALEWSRNSKINGDFKIQAALNLAEELRVPKLTAESTWNFEM
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MKASLKGRYETDKDRGVAAATVAFNAGDVKLRASLTDATVVNGPSLNGLALAVEKPGFFIVDYNVPKKDFRFQFMNSVRVADKPLNLTYIHGRGDNRTILEGTLVFDSANKVSANHVLGSGNCKLKYTYVHGGLTTFEQWYDLAKNSWDFAVSRKVYGDDMFRASYQTSSKALALEWSRNSKINGDFKIQAALNLAEELRVPKLTAESTWNFEM
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	214	2.2.26 [Sep-21-2011]
Q8H0Y1	213	Outer envelope pore prote	yes	no	0.985	0.990	0.700	9e-89
O49929	213	Outer envelope pore prote	N/A	no	0.995	1.0	0.728	2e-87
Q1H5C9	213	Outer envelope pore prote	no	no	0.990	0.995	0.677	4e-86
B8ANR3	224	Outer envelope pore prote	N/A	no	1.0	0.955	0.486	5e-58
Q75IQ4	224	Outer envelope pore prote	yes	no	1.0	0.955	0.486	1e-57

>sp|Q8H0Y1|OP24B_ARATH Outer envelope pore protein 24B, chloroplastic OS=Arabidopsis thaliana GN=OEP24B PE=1 SV=1

 Score =  326 bits (835), Expect = 9e-89,   Method: Compositional matrix adjust.
 Identities = 150/214 (70%), Positives = 185/214 (86%), Gaps = 3/214 (1%)

Query: 1   MKASLKGRYETDKDRGVAAATVAFNAGDVKLRASLTDATVVNGPSLNGLALAVEKPGFFI 60
           MKAS+KG+Y+TDK  G+   ++AFNAGD+KLRA++TDAT+V GP+L GLALAVEKPG FI
Sbjct: 3   MKASIKGKYDTDKTSGIG--SLAFNAGDIKLRATMTDATLVAGPTLTGLALAVEKPGSFI 60

Query: 61  VDYNVPKKDFRFQFMNSVRVADKPLNLTYIHGRGDNRTILEGTLVFDSANKVSANHVLGS 120
           V+YNVPKKD RFQFMN+VR+A+KPLNLTYIH R DNRTI++G+LV DSANK+SANH++G+
Sbjct: 61  VEYNVPKKDVRFQFMNTVRIAEKPLNLTYIHSRADNRTIVDGSLVIDSANKLSANHMVGT 120

Query: 121 GNCKLKYTYVHGGLTTFEQWYDLAKNSWDFAVSRKVYGDDMFRASYQTSSKALALEWSRN 180
            NCK+KYTY HGGL TFE  YDLAKN+WDFAVSR+ Y  D  RA+YQTSSK L +EWSRN
Sbjct: 121 NNCKIKYTYAHGGLATFEPCYDLAKNTWDFAVSRRFYSGDNVRATYQTSSKLLGMEWSRN 180

Query: 181 SKINGDFKIQAALNLAEELRVPKLTAESTWNFEM 214
           +K +G FK+ A++NLA+EL+ PKLTAE+TWN EM
Sbjct: 181 NKASG-FKVCASVNLADELKTPKLTAETTWNLEM 213

High-conductance voltage-dependent solute channel with a slight selectivity for cations transporting triosephosphates, dicarboxylic acids, ATP, inorganic phosphate (Pi), sugars, and positively or negatively charged amino acids.
Arabidopsis thaliana (taxid: 3702)

>sp|O49929|OEP24_PEA Outer envelope pore protein 24, chloroplastic OS=Pisum sativum GN=OEP24 PE=1 SV=1

 Score =  321 bits (822), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 156/214 (72%), Positives = 179/214 (83%), Gaps = 1/214 (0%)

Query: 1   MKASLKGRYETDKDRGVAAATVAFNAGDVKLRASLTDATVVNGPSLNGLALAVEKPGFFI 60
           MKA+LKG+Y+ D +    AATVAFNAGDVKLRAS+TDAT  N PSL GL LAVEKPG F 
Sbjct: 1   MKAALKGKYDLDHNSS-GAATVAFNAGDVKLRASITDATFKNSPSLTGLVLAVEKPGSFS 59

Query: 61  VDYNVPKKDFRFQFMNSVRVADKPLNLTYIHGRGDNRTILEGTLVFDSANKVSANHVLGS 120
           VDYNVPKKDFRFQFMN+VRVA+KPLNL YIH +GDNRTIL+GTLV+D +NKVSAN+ + S
Sbjct: 60  VDYNVPKKDFRFQFMNTVRVAEKPLNLAYIHSKGDNRTILDGTLVWDPSNKVSANYAVES 119

Query: 121 GNCKLKYTYVHGGLTTFEQWYDLAKNSWDFAVSRKVYGDDMFRASYQTSSKALALEWSRN 180
           GNCKLKY+Y H GLTT E  YD+AKNSWDFAVS KVYGDD  +ASYQTSSK L LEW+RN
Sbjct: 120 GNCKLKYSYNHKGLTTIEPTYDVAKNSWDFAVSGKVYGDDSLKASYQTSSKVLGLEWTRN 179

Query: 181 SKINGDFKIQAALNLAEELRVPKLTAESTWNFEM 214
           SK  G FK+ A++NLAEE ++PKL+ EST NFEM
Sbjct: 180 SKQTGCFKVVASVNLAEEKKIPKLSVESTLNFEM 213

High-conductance voltage-dependent solute channel with a slight selectivity for cations transporting triosephosphates, dicarboxylic acids, ATP, inorganic phosphate (Pi), sugars, and positively or negatively charged amino acids.

Pisum sativum (taxid: 3888)

>sp|Q1H5C9|OP24A_ARATH Outer envelope pore protein 24A, chloroplastic OS=Arabidopsis thaliana GN=OEP24A PE=1 SV=1

 Score =  317 bits (812), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 145/214 (67%), Positives = 179/214 (83%), Gaps = 2/214 (0%)

Query: 1   MKASLKGRYETDKDRGVAAATVAFNAGDVKLRASLTDATVVNGPSLNGLALAVEKPGFFI 60
           MKAS KG+++ DK   VA+ T  FNAG+ KLRA++TDA+ V GPS NGL+LAVEKPGFFI
Sbjct: 2   MKASFKGKFDVDKSGSVASLT--FNAGNAKLRATMTDASFVAGPSFNGLSLAVEKPGFFI 59

Query: 61  VDYNVPKKDFRFQFMNSVRVADKPLNLTYIHGRGDNRTILEGTLVFDSANKVSANHVLGS 120
           +DYNVPKKD RFQFMN++R+A+KPLNLTYIH RGDNRTI++G+ V D ANK+SAN+++G+
Sbjct: 60  IDYNVPKKDVRFQFMNTIRIAEKPLNLTYIHMRGDNRTIVDGSFVIDPANKLSANYMVGT 119

Query: 121 GNCKLKYTYVHGGLTTFEQWYDLAKNSWDFAVSRKVYGDDMFRASYQTSSKALALEWSRN 180
            NCKLKYTYVHGG+ TFE  YD+AKN WDFA+S K+YG D  +A+YQTSSK L LEWS N
Sbjct: 120 KNCKLKYTYVHGGIATFEPCYDVAKNMWDFAISHKLYGGDNLKATYQTSSKMLGLEWSNN 179

Query: 181 SKINGDFKIQAALNLAEELRVPKLTAESTWNFEM 214
           SK  G FK+ A++NLAEEL+ PKLTAE+TWN E+
Sbjct: 180 SKSTGSFKVCASMNLAEELKPPKLTAETTWNLEL 213

High-conductance voltage-dependent solute channel with a slight selectivity for cations transporting triosephosphates, dicarboxylic acids, ATP, inorganic phosphate (Pi), sugars, and positively or negatively charged amino acids.

Arabidopsis thaliana (taxid: 3702)

>sp|B8ANR3|OEP24_ORYSI Outer envelope pore protein 24, chloroplastic OS=Oryza sativa subsp. indica GN=OEP24 PE=3 SV=1

 Score =  223 bits (569), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 109/224 (48%), Positives = 148/224 (66%), Gaps = 10/224 (4%)

Query: 1   MKASLKGRYETDKDRGVAAATVAFNAGDVKLRASLTDATVVNGPSLNGLALAVEKPGFFI 60
           MKA++KGRYE DK    A      +A D++ +AS TDA    GPSL GL L +EKPG F+
Sbjct: 1   MKATVKGRYEGDKATAAATLAFTPSAADLRFKASATDAAFARGPSLEGLTLTLEKPGSFL 60

Query: 61  VDYNVPKKDFRFQFMNSVRVADKPLNLTYIH--------GRGDNRTILEGTLVFDSANKV 112
           +D     KD RFQFMNS  + D+ ++LTY H         +   RT L+G+L FD ANK+
Sbjct: 61  LDLKPHSKDVRFQFMNSALLLDRRVSLTYTHSTTLSPGPAKPPARTALDGSLTFDPANKL 120

Query: 113 SANHVLGSGNCKLKYTYVHGG--LTTFEQWYDLAKNSWDFAVSRKVYGDDMFRASYQTSS 170
           S +H LGS  C++KY+Y HG   LTT E  +D A N+WDFAV+RK  G D  +A+YQ S+
Sbjct: 121 SLSHTLGSSGCRVKYSYAHGQDRLTTIEPCFDTANNAWDFAVTRKFQGGDAIKATYQAST 180

Query: 171 KALALEWSRNSKINGDFKIQAALNLAEELRVPKLTAESTWNFEM 214
           K LAL+W+R+SKI   FK+ A+ +L+++ + PKL AESTWN+E+
Sbjct: 181 KLLALDWTRDSKIGASFKVAASFDLSDQSKAPKLIAESTWNYEI 224

High-conductance voltage-dependent solute channel with a slight selectivity for cations transporting triosephosphates, dicarboxylic acids, ATP, inorganic phosphate (Pi), sugars, and positively or negatively charged amino acids.

Oryza sativa subsp. indica (taxid: 39946)

>sp|Q75IQ4|OEP24_ORYSJ Outer envelope pore protein 24, chloroplastic OS=Oryza sativa subsp. japonica GN=OEP24 PE=2 SV=1

 Score =  222 bits (565), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 109/224 (48%), Positives = 148/224 (66%), Gaps = 10/224 (4%)

Query: 1   MKASLKGRYETDKDRGVAAATVAFNAGDVKLRASLTDATVVNGPSLNGLALAVEKPGFFI 60
           MKA++KGRYE DK    A      +A D++ +AS TDA    GPSL GL L +EKPG F+
Sbjct: 1   MKATVKGRYEGDKATAAATLAFTPSAADLRFKASATDAAFARGPSLEGLILTLEKPGSFL 60

Query: 61  VDYNVPKKDFRFQFMNSVRVADKPLNLTYIH--------GRGDNRTILEGTLVFDSANKV 112
           +D     KD RFQFMNS  + D+ ++LTY H         +   RT L+G+L FD ANK+
Sbjct: 61  LDLKPHSKDVRFQFMNSALLLDRRVSLTYTHSTTLSPGPAKLPARTALDGSLTFDPANKL 120

Query: 113 SANHVLGSGNCKLKYTYVHGG--LTTFEQWYDLAKNSWDFAVSRKVYGDDMFRASYQTSS 170
           S +H LGS  C++KY+Y HG   LTT E  +D A N+WDFAV+RK  G D  +A+YQ S+
Sbjct: 121 SLSHTLGSSGCRVKYSYAHGQDRLTTIEPCFDTANNAWDFAVTRKFQGGDAIKATYQAST 180

Query: 171 KALALEWSRNSKINGDFKIQAALNLAEELRVPKLTAESTWNFEM 214
           K LAL+W+R+SKI   FK+ A+ +L+++ + PKL AESTWN+E+
Sbjct: 181 KLLALDWTRDSKIGASFKVAASFDLSDQSKAPKLIAESTWNYEI 224

High-conductance voltage-dependent solute channel with a slight selectivity for cations transporting triosephosphates, dicarboxylic acids, ATP, inorganic phosphate (Pi), sugars, and positively or negatively charged amino acids.

Oryza sativa subsp. japonica (taxid: 39947)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	214
224132122	212	hypothetical protein POPTRDRAFT_573245 [	0.990	1.0	0.817	1e-100
255538596	213	conserved hypothetical protein [Ricinus	0.990	0.995	0.808	3e-97
449460110	212	PREDICTED: outer envelope pore protein 2	0.990	1.0	0.752	6e-92
356552120	214	PREDICTED: uncharacterized protein LOC10	0.995	0.995	0.734	2e-88
363807866	214	uncharacterized protein LOC100785739 [Gl	0.995	0.995	0.730	1e-87
18422277	213	uncharacterized protein [Arabidopsis tha	0.985	0.990	0.700	5e-87
116831573	214	unknown [Arabidopsis thaliana]	0.985	0.985	0.700	6e-87
9758585	211	unnamed protein product [Arabidopsis tha	0.985	1.0	0.700	6e-87
297852260	214	F27F5.25 [Arabidopsis lyrata subsp. lyra	0.990	0.990	0.696	9e-87
75098940	213	RecName: Full=Outer envelope pore protei	0.995	1.0	0.728	1e-85

>gi|224132122|ref|XP_002321261.1| hypothetical protein POPTRDRAFT_573245 [Populus trichocarpa] gi|222862034|gb|EEE99576.1| hypothetical protein POPTRDRAFT_573245 [Populus trichocarpa]

 Score =  369 bits (948), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 175/214 (81%), Positives = 195/214 (91%), Gaps = 2/214 (0%)

Query: 1   MKASLKGRYETDKDRGVAAATVAFNAGDVKLRASLTDATVVNGPSLNGLALAVEKPGFFI 60
           MKASLKG+Y  D D+   AATVAFNAGDVKLRAS+TDATVVNGPSLNGLALAVEKPGFFI
Sbjct: 1   MKASLKGKY--DNDKSSTAATVAFNAGDVKLRASITDATVVNGPSLNGLALAVEKPGFFI 58

Query: 61  VDYNVPKKDFRFQFMNSVRVADKPLNLTYIHGRGDNRTILEGTLVFDSANKVSANHVLGS 120
           +DYNVPKKDFRFQFMNSV+V DKPLNLTYIH RGDNRTIL+GTLV DSANK+SAN++LG+
Sbjct: 59  IDYNVPKKDFRFQFMNSVKVVDKPLNLTYIHCRGDNRTILDGTLVVDSANKISANYMLGT 118

Query: 121 GNCKLKYTYVHGGLTTFEQWYDLAKNSWDFAVSRKVYGDDMFRASYQTSSKALALEWSRN 180
            NCKLKYTYVHGGLT+FEQ YD AKNSWDFA SRKVYGDD+ RA YQTSSK L +EWSRN
Sbjct: 119 ENCKLKYTYVHGGLTSFEQCYDFAKNSWDFAGSRKVYGDDVLRAVYQTSSKNLGMEWSRN 178

Query: 181 SKINGDFKIQAALNLAEELRVPKLTAESTWNFEM 214
           SK+NG+FK+ A++NLAEE ++PKLTAESTWNFEM
Sbjct: 179 SKLNGNFKVSASINLAEESKMPKLTAESTWNFEM 212

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255538596|ref|XP_002510363.1| conserved hypothetical protein [Ricinus communis] gi|223551064|gb|EEF52550.1| conserved hypothetical protein [Ricinus communis]

 Score =  360 bits (923), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 173/214 (80%), Positives = 192/214 (89%), Gaps = 2/214 (0%)

Query: 1   MKASLKGRYETDKDRGVAAATVAFNAGDVKLRASLTDATVVNGPSLNGLALAVEKPGFFI 60
           MKASLKGRYETDK    AA      AGDVKLRAS+TDATVV GPSLNGL LAVEKPGFF+
Sbjct: 2   MKASLKGRYETDKSSAAAAVAFN--AGDVKLRASMTDATVVKGPSLNGLVLAVEKPGFFM 59

Query: 61  VDYNVPKKDFRFQFMNSVRVADKPLNLTYIHGRGDNRTILEGTLVFDSANKVSANHVLGS 120
           VDYNVPKKDFRFQFM++++VADKPLNLTYIH RGDNRT+L+G LV DSANK++ANH+LGS
Sbjct: 60  VDYNVPKKDFRFQFMSTIKVADKPLNLTYIHSRGDNRTVLDGALVLDSANKLAANHILGS 119

Query: 121 GNCKLKYTYVHGGLTTFEQWYDLAKNSWDFAVSRKVYGDDMFRASYQTSSKALALEWSRN 180
           GNCKLKYTYVHGG+TTFE  YDLAKNSWDFAVSRKVY DD+FRA+YQTSSKAL LEWSRN
Sbjct: 120 GNCKLKYTYVHGGVTTFEPCYDLAKNSWDFAVSRKVYADDVFRATYQTSSKALGLEWSRN 179

Query: 181 SKINGDFKIQAALNLAEELRVPKLTAESTWNFEM 214
           SK NG+FKI A++NLAEE +VPKL+AESTWNFEM
Sbjct: 180 SKFNGNFKIAASVNLAEESKVPKLSAESTWNFEM 213

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449460110|ref|XP_004147789.1| PREDICTED: outer envelope pore protein 24B, chloroplastic-like [Cucumis sativus] gi|449476784|ref|XP_004154833.1| PREDICTED: outer envelope pore protein 24B, chloroplastic-like [Cucumis sativus]

 Score =  342 bits (877), Expect = 6e-92,   Method: Compositional matrix adjust.
 Identities = 161/214 (75%), Positives = 191/214 (89%), Gaps = 2/214 (0%)

Query: 1   MKASLKGRYETDKDRGVAAATVAFNAGDVKLRASLTDATVVNGPSLNGLALAVEKPGFFI 60
           MKA+LK +Y  D D+  AA+T+A NAGDVKLRAS+TDAT++NGPSLNGLAL+VEKPGFFI
Sbjct: 1   MKATLKTKY--DADKSGAASTLAVNAGDVKLRASITDATIINGPSLNGLALSVEKPGFFI 58

Query: 61  VDYNVPKKDFRFQFMNSVRVADKPLNLTYIHGRGDNRTILEGTLVFDSANKVSANHVLGS 120
           VDYNVPKKD RFQFMN+V+VA+KPLNLTYIH   D+RTIL+GTLVFDSANKVSANH LGS
Sbjct: 59  VDYNVPKKDLRFQFMNTVKVAEKPLNLTYIHSWADSRTILDGTLVFDSANKVSANHALGS 118

Query: 121 GNCKLKYTYVHGGLTTFEQWYDLAKNSWDFAVSRKVYGDDMFRASYQTSSKALALEWSRN 180
           GNCKLKYTYVH G TTFE  YD+AKNSWDFAVSRKVYGDD+F+A+YQT+SK L LEW+RN
Sbjct: 119 GNCKLKYTYVHEGATTFEPSYDVAKNSWDFAVSRKVYGDDVFKATYQTTSKVLGLEWTRN 178

Query: 181 SKINGDFKIQAALNLAEELRVPKLTAESTWNFEM 214
            K +G+FK+ A++N+A+E + PK+TAESTWNFE+
Sbjct: 179 LKSSGNFKVVASVNMADESKRPKVTAESTWNFEV 212

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356552120|ref|XP_003544418.1| PREDICTED: uncharacterized protein LOC100802815 [Glycine max]

 Score =  330 bits (846), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 158/215 (73%), Positives = 182/215 (84%), Gaps = 2/215 (0%)

Query: 1   MKASLKGRYETDKDRGVAAATVAFNAGDVKLRASLTDATVVNGPSLNGLALAVEKPGFFI 60
           MKA+LKG+Y+ DK+ G A A +A NAGDVK RAS+T+AT +NGPSL GLALAVEKPG FI
Sbjct: 1   MKATLKGKYDVDKN-GAAFANIAVNAGDVKFRASVTEATFINGPSLTGLALAVEKPGSFI 59

Query: 61  VDYNVPKKDFRFQFMNSVRVADKPLNLTYIHGRGDNRTILEGTLVFDSANKVSANHVLGS 120
           VDYNVPKKDFRFQFMN+VRV ++PLNLTY H RGDNRT+L+GT V+DSANKVSAN+ L S
Sbjct: 60  VDYNVPKKDFRFQFMNTVRVGERPLNLTYAHSRGDNRTVLDGTFVYDSANKVSANYALDS 119

Query: 121 GNCKLKYTYVHGGLTTFEQWYDLAKNSWDFAVSRKVY-GDDMFRASYQTSSKALALEWSR 179
           GNCKLKYTYVH GLTTFE  YD+AKN+WDFAVSR+VY GDD  RASYQTSS+ L +EWSR
Sbjct: 120 GNCKLKYTYVHKGLTTFEPAYDVAKNTWDFAVSRRVYGGDDTLRASYQTSSRVLGVEWSR 179

Query: 180 NSKINGDFKIQAALNLAEELRVPKLTAESTWNFEM 214
           N K    FKI A++NLAEE + PKL AE+TWNFEM
Sbjct: 180 NPKHTAGFKIVASVNLAEEFKAPKLVAETTWNFEM 214

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|363807866|ref|NP_001242188.1| uncharacterized protein LOC100785739 [Glycine max] gi|255647198|gb|ACU24067.1| unknown [Glycine max]

 Score =  327 bits (839), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 157/215 (73%), Positives = 180/215 (83%), Gaps = 2/215 (0%)

Query: 1   MKASLKGRYETDKDRGVAAATVAFNAGDVKLRASLTDATVVNGPSLNGLALAVEKPGFFI 60
           MKA+LKG+Y+ DK+ G A A +A NAGDVK RAS+T+AT +NGPS  GLALAVEKPG FI
Sbjct: 1   MKATLKGKYDVDKN-GAAFANIAVNAGDVKFRASVTEATFINGPSFTGLALAVEKPGSFI 59

Query: 61  VDYNVPKKDFRFQFMNSVRVADKPLNLTYIHGRGDNRTILEGTLVFDSANKVSANHVLGS 120
           VDYNVPKKDFRFQFMN+VRV ++PLNLTY H RGDNRT+L+GT V+DSANKVSAN+ L S
Sbjct: 60  VDYNVPKKDFRFQFMNTVRVGERPLNLTYAHSRGDNRTVLDGTFVYDSANKVSANYALDS 119

Query: 121 GNCKLKYTYVHGGLTTFEQWYDLAKNSWDFAVSRKVY-GDDMFRASYQTSSKALALEWSR 179
           GNCKLKYTYVH GLTTFE  YD+AKN+WDFAVSR+VY GDD  RASYQTSS  L +EWSR
Sbjct: 120 GNCKLKYTYVHKGLTTFEPAYDVAKNTWDFAVSRRVYGGDDTLRASYQTSSTVLGVEWSR 179

Query: 180 NSKINGDFKIQAALNLAEELRVPKLTAESTWNFEM 214
           N K    FKI A++NLAEE + PKL AE+TWNFEM
Sbjct: 180 NPKHTAGFKIVASVNLAEEFKAPKLVAETTWNFEM 214

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18422277|ref|NP_568618.1| uncharacterized protein [Arabidopsis thaliana] gi|75151846|sp|Q8H0Y1.1|OP24B_ARATH RecName: Full=Outer envelope pore protein 24B, chloroplastic; AltName: Full=Chloroplastic outer envelope pore protein of 24 kDa B gi|24899671|gb|AAN65050.1| Unknown protein [Arabidopsis thaliana] gi|98961909|gb|ABF59284.1| unknown protein [Arabidopsis thaliana] gi|332007511|gb|AED94894.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  326 bits (835), Expect = 5e-87,   Method: Compositional matrix adjust.
 Identities = 150/214 (70%), Positives = 185/214 (86%), Gaps = 3/214 (1%)

Query: 1   MKASLKGRYETDKDRGVAAATVAFNAGDVKLRASLTDATVVNGPSLNGLALAVEKPGFFI 60
           MKAS+KG+Y+TDK  G+   ++AFNAGD+KLRA++TDAT+V GP+L GLALAVEKPG FI
Sbjct: 3   MKASIKGKYDTDKTSGIG--SLAFNAGDIKLRATMTDATLVAGPTLTGLALAVEKPGSFI 60

Query: 61  VDYNVPKKDFRFQFMNSVRVADKPLNLTYIHGRGDNRTILEGTLVFDSANKVSANHVLGS 120
           V+YNVPKKD RFQFMN+VR+A+KPLNLTYIH R DNRTI++G+LV DSANK+SANH++G+
Sbjct: 61  VEYNVPKKDVRFQFMNTVRIAEKPLNLTYIHSRADNRTIVDGSLVIDSANKLSANHMVGT 120

Query: 121 GNCKLKYTYVHGGLTTFEQWYDLAKNSWDFAVSRKVYGDDMFRASYQTSSKALALEWSRN 180
            NCK+KYTY HGGL TFE  YDLAKN+WDFAVSR+ Y  D  RA+YQTSSK L +EWSRN
Sbjct: 121 NNCKIKYTYAHGGLATFEPCYDLAKNTWDFAVSRRFYSGDNVRATYQTSSKLLGMEWSRN 180

Query: 181 SKINGDFKIQAALNLAEELRVPKLTAESTWNFEM 214
           +K +G FK+ A++NLA+EL+ PKLTAE+TWN EM
Sbjct: 181 NKASG-FKVCASVNLADELKTPKLTAETTWNLEM 213

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|116831573|gb|ABK28739.1| unknown [Arabidopsis thaliana]

 Score =  325 bits (834), Expect = 6e-87,   Method: Compositional matrix adjust.
 Identities = 150/214 (70%), Positives = 185/214 (86%), Gaps = 3/214 (1%)

Query: 1   MKASLKGRYETDKDRGVAAATVAFNAGDVKLRASLTDATVVNGPSLNGLALAVEKPGFFI 60
           MKAS+KG+Y+TDK  G+   ++AFNAGD+KLRA++TDAT+V GP+L GLALAVEKPG FI
Sbjct: 3   MKASIKGKYDTDKTSGIG--SLAFNAGDIKLRATMTDATLVAGPTLTGLALAVEKPGSFI 60

Query: 61  VDYNVPKKDFRFQFMNSVRVADKPLNLTYIHGRGDNRTILEGTLVFDSANKVSANHVLGS 120
           V+YNVPKKD RFQFMN+VR+A+KPLNLTYIH R DNRTI++G+LV DSANK+SANH++G+
Sbjct: 61  VEYNVPKKDVRFQFMNTVRIAEKPLNLTYIHSRADNRTIVDGSLVIDSANKLSANHMVGT 120

Query: 121 GNCKLKYTYVHGGLTTFEQWYDLAKNSWDFAVSRKVYGDDMFRASYQTSSKALALEWSRN 180
            NCK+KYTY HGGL TFE  YDLAKN+WDFAVSR+ Y  D  RA+YQTSSK L +EWSRN
Sbjct: 121 NNCKIKYTYAHGGLATFEPCYDLAKNTWDFAVSRRFYSGDNVRATYQTSSKLLGMEWSRN 180

Query: 181 SKINGDFKIQAALNLAEELRVPKLTAESTWNFEM 214
           +K +G FK+ A++NLA+EL+ PKLTAE+TWN EM
Sbjct: 181 NKASG-FKVCASVNLADELKTPKLTAETTWNLEM 213

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|9758585|dbj|BAB09198.1| unnamed protein product [Arabidopsis thaliana]

 Score =  325 bits (834), Expect = 6e-87,   Method: Compositional matrix adjust.
 Identities = 150/214 (70%), Positives = 185/214 (86%), Gaps = 3/214 (1%)

Query: 1   MKASLKGRYETDKDRGVAAATVAFNAGDVKLRASLTDATVVNGPSLNGLALAVEKPGFFI 60
           MKAS+KG+Y+TDK  G+ +  +AFNAGD+KLRA++TDAT+V GP+L GLALAVEKPG FI
Sbjct: 1   MKASIKGKYDTDKTSGIGS--LAFNAGDIKLRATMTDATLVAGPTLTGLALAVEKPGSFI 58

Query: 61  VDYNVPKKDFRFQFMNSVRVADKPLNLTYIHGRGDNRTILEGTLVFDSANKVSANHVLGS 120
           V+YNVPKKD RFQFMN+VR+A+KPLNLTYIH R DNRTI++G+LV DSANK+SANH++G+
Sbjct: 59  VEYNVPKKDVRFQFMNTVRIAEKPLNLTYIHSRADNRTIVDGSLVIDSANKLSANHMVGT 118

Query: 121 GNCKLKYTYVHGGLTTFEQWYDLAKNSWDFAVSRKVYGDDMFRASYQTSSKALALEWSRN 180
            NCK+KYTY HGGL TFE  YDLAKN+WDFAVSR+ Y  D  RA+YQTSSK L +EWSRN
Sbjct: 119 NNCKIKYTYAHGGLATFEPCYDLAKNTWDFAVSRRFYSGDNVRATYQTSSKLLGMEWSRN 178

Query: 181 SKINGDFKIQAALNLAEELRVPKLTAESTWNFEM 214
           +K +G FK+ A++NLA+EL+ PKLTAE+TWN EM
Sbjct: 179 NKASG-FKVCASVNLADELKTPKLTAETTWNLEM 211

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297852260|ref|XP_002894011.1| F27F5.25 [Arabidopsis lyrata subsp. lyrata] gi|297339853|gb|EFH70270.1| F27F5.25 [Arabidopsis lyrata subsp. lyrata]

 Score =  325 bits (832), Expect = 9e-87,   Method: Compositional matrix adjust.
 Identities = 149/214 (69%), Positives = 184/214 (85%), Gaps = 2/214 (0%)

Query: 1   MKASLKGRYETDKDRGVAAATVAFNAGDVKLRASLTDATVVNGPSLNGLALAVEKPGFFI 60
           MKAS KG+++ D   GVA  +++FNAG+ KLRA++TD ++V GPSLNGL+LAVEKPGFFI
Sbjct: 3   MKASFKGKFDVDNSGGVA--SLSFNAGNAKLRATMTDTSLVAGPSLNGLSLAVEKPGFFI 60

Query: 61  VDYNVPKKDFRFQFMNSVRVADKPLNLTYIHGRGDNRTILEGTLVFDSANKVSANHVLGS 120
           +DYNVPKKD RFQFMN+VR+A+KPLNLTYIH RGDNRTI++G+LV D ANK+SAN+++G+
Sbjct: 61  IDYNVPKKDVRFQFMNTVRIAEKPLNLTYIHMRGDNRTIVDGSLVIDPANKLSANYMVGT 120

Query: 121 GNCKLKYTYVHGGLTTFEQWYDLAKNSWDFAVSRKVYGDDMFRASYQTSSKALALEWSRN 180
            NCKLKYTYVHGG+ TFE  YDLAKN WDFAVSRK+YG D  +A+YQTSSK L LEWSRN
Sbjct: 121 KNCKLKYTYVHGGIATFEPCYDLAKNVWDFAVSRKLYGGDNLKATYQTSSKMLGLEWSRN 180

Query: 181 SKINGDFKIQAALNLAEELRVPKLTAESTWNFEM 214
           S+  G FK+ A++NLAEEL+ PKLTAE+TWN E+
Sbjct: 181 SQSTGSFKVCASMNLAEELKPPKLTAETTWNLEI 214

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|75098940|sp|O49929.1|OEP24_PEA RecName: Full=Outer envelope pore protein 24, chloroplastic; AltName: Full=Chloroplastic outer envelope pore protein of 24 kDa gi|2764574|emb|CAA04468.1| pore protein of 24 kD (OEP24) [Pisum sativum]

 Score =  321 bits (822), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 156/214 (72%), Positives = 179/214 (83%), Gaps = 1/214 (0%)

Query: 1   MKASLKGRYETDKDRGVAAATVAFNAGDVKLRASLTDATVVNGPSLNGLALAVEKPGFFI 60
           MKA+LKG+Y+ D +    AATVAFNAGDVKLRAS+TDAT  N PSL GL LAVEKPG F 
Sbjct: 1   MKAALKGKYDLDHNSS-GAATVAFNAGDVKLRASITDATFKNSPSLTGLVLAVEKPGSFS 59

Query: 61  VDYNVPKKDFRFQFMNSVRVADKPLNLTYIHGRGDNRTILEGTLVFDSANKVSANHVLGS 120
           VDYNVPKKDFRFQFMN+VRVA+KPLNL YIH +GDNRTIL+GTLV+D +NKVSAN+ + S
Sbjct: 60  VDYNVPKKDFRFQFMNTVRVAEKPLNLAYIHSKGDNRTILDGTLVWDPSNKVSANYAVES 119

Query: 121 GNCKLKYTYVHGGLTTFEQWYDLAKNSWDFAVSRKVYGDDMFRASYQTSSKALALEWSRN 180
           GNCKLKY+Y H GLTT E  YD+AKNSWDFAVS KVYGDD  +ASYQTSSK L LEW+RN
Sbjct: 120 GNCKLKYSYNHKGLTTIEPTYDVAKNSWDFAVSGKVYGDDSLKASYQTSSKVLGLEWTRN 179

Query: 181 SKINGDFKIQAALNLAEELRVPKLTAESTWNFEM 214
           SK  G FK+ A++NLAEE ++PKL+ EST NFEM
Sbjct: 180 SKQTGCFKVVASVNLAEEKKIPKLSVESTLNFEM 213

Source: Pisum sativum

Species: Pisum sativum

Genus: Pisum

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	214
TAIR|locus:2160051	213	AT5G42960 "AT5G42960" [Arabido	0.985	0.990	0.700	3.2e-81
UNIPROTKB|O49929	213	OEP24 "Outer envelope pore pro	0.995	1.0	0.728	2.2e-80
TAIR|locus:2028210	213	AT1G45170 "AT1G45170" [Arabido	0.990	0.995	0.677	5.4e-79

TAIR|locus:2160051 AT5G42960 "AT5G42960" [Arabidopsis thaliana (taxid:3702)]

 Score = 815 (292.0 bits), Expect = 3.2e-81, P = 3.2e-81
 Identities = 150/214 (70%), Positives = 185/214 (86%)

Query:     1 MKASLKGRYETDKDRGVAAATVAFNAGDVKLRASLTDATVVNGPSLNGLALAVEKPGFFI 60
             MKAS+KG+Y+TDK  G+ +  +AFNAGD+KLRA++TDAT+V GP+L GLALAVEKPG FI
Sbjct:     3 MKASIKGKYDTDKTSGIGS--LAFNAGDIKLRATMTDATLVAGPTLTGLALAVEKPGSFI 60

Query:    61 VDYNVPKKDFRFQFMNSVRVADKPLNLTYIHGRGDNRTILEGTLVFDSANKVSANHVLGS 120
             V+YNVPKKD RFQFMN+VR+A+KPLNLTYIH R DNRTI++G+LV DSANK+SANH++G+
Sbjct:    61 VEYNVPKKDVRFQFMNTVRIAEKPLNLTYIHSRADNRTIVDGSLVIDSANKLSANHMVGT 120

Query:   121 GNCKLKYTYVHGGLTTFEQWYDLAKNSWDFAVSRKVYGDDMFRASYQTSSKALALEWSRN 180
              NCK+KYTY HGGL TFE  YDLAKN+WDFAVSR+ Y  D  RA+YQTSSK L +EWSRN
Sbjct:   121 NNCKIKYTYAHGGLATFEPCYDLAKNTWDFAVSRRFYSGDNVRATYQTSSKLLGMEWSRN 180

Query:   181 SKINGDFKIQAALNLAEELRVPKLTAESTWNFEM 214
             +K +G FK+ A++NLA+EL+ PKLTAE+TWN EM
Sbjct:   181 NKASG-FKVCASVNLADELKTPKLTAETTWNLEM 213

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0009507 "chloroplast" evidence=IDA

GO:0005739 "mitochondrion" evidence=IDA

GO:0009536 "plastid" evidence=IDA

UNIPROTKB|O49929 OEP24 "Outer envelope pore protein 24, chloroplastic" [Pisum sativum (taxid:3888)]

 Score = 807 (289.1 bits), Expect = 2.2e-80, P = 2.2e-80
 Identities = 156/214 (72%), Positives = 179/214 (83%)

Query:     1 MKASLKGRYETDKDRGVAAATVAFNAGDVKLRASLTDATVVNGPSLNGLALAVEKPGFFI 60
             MKA+LKG+Y+ D +    AATVAFNAGDVKLRAS+TDAT  N PSL GL LAVEKPG F 
Sbjct:     1 MKAALKGKYDLDHNSS-GAATVAFNAGDVKLRASITDATFKNSPSLTGLVLAVEKPGSFS 59

Query:    61 VDYNVPKKDFRFQFMNSVRVADKPLNLTYIHGRGDNRTILEGTLVFDSANKVSANHVLGS 120
             VDYNVPKKDFRFQFMN+VRVA+KPLNL YIH +GDNRTIL+GTLV+D +NKVSAN+ + S
Sbjct:    60 VDYNVPKKDFRFQFMNTVRVAEKPLNLAYIHSKGDNRTILDGTLVWDPSNKVSANYAVES 119

Query:   121 GNCKLKYTYVHGGLTTFEQWYDLAKNSWDFAVSRKVYGDDMFRASYQTSSKALALEWSRN 180
             GNCKLKY+Y H GLTT E  YD+AKNSWDFAVS KVYGDD  +ASYQTSSK L LEW+RN
Sbjct:   120 GNCKLKYSYNHKGLTTIEPTYDVAKNSWDFAVSGKVYGDDSLKASYQTSSKVLGLEWTRN 179

Query:   181 SKINGDFKIQAALNLAEELRVPKLTAESTWNFEM 214
             SK  G FK+ A++NLAEE ++PKL+ EST NFEM
Sbjct:   180 SKQTGCFKVVASVNLAEEKKIPKLSVESTLNFEM 213

GO:0015288 "porin activity" evidence=IDA

GO:0022843 "voltage-gated cation channel activity" evidence=IDA

GO:0031359 "integral to chloroplast outer membrane" evidence=IDA

GO:0034426 "etioplast membrane" evidence=IDA

GO:0034765 "regulation of ion transmembrane transport" evidence=IDA

GO:0046930 "pore complex" evidence=IDA

TAIR|locus:2028210 AT1G45170 "AT1G45170" [Arabidopsis thaliana (taxid:3702)]

 Score = 794 (284.6 bits), Expect = 5.4e-79, P = 5.4e-79
 Identities = 145/214 (67%), Positives = 179/214 (83%)

Query:     1 MKASLKGRYETDKDRGVAAATVAFNAGDVKLRASLTDATVVNGPSLNGLALAVEKPGFFI 60
             MKAS KG+++ DK   VA+ T  FNAG+ KLRA++TDA+ V GPS NGL+LAVEKPGFFI
Sbjct:     2 MKASFKGKFDVDKSGSVASLT--FNAGNAKLRATMTDASFVAGPSFNGLSLAVEKPGFFI 59

Query:    61 VDYNVPKKDFRFQFMNSVRVADKPLNLTYIHGRGDNRTILEGTLVFDSANKVSANHVLGS 120
             +DYNVPKKD RFQFMN++R+A+KPLNLTYIH RGDNRTI++G+ V D ANK+SAN+++G+
Sbjct:    60 IDYNVPKKDVRFQFMNTIRIAEKPLNLTYIHMRGDNRTIVDGSFVIDPANKLSANYMVGT 119

Query:   121 GNCKLKYTYVHGGLTTFEQWYDLAKNSWDFAVSRKVYGDDMFRASYQTSSKALALEWSRN 180
              NCKLKYTYVHGG+ TFE  YD+AKN WDFA+S K+YG D  +A+YQTSSK L LEWS N
Sbjct:   120 KNCKLKYTYVHGGIATFEPCYDVAKNMWDFAISHKLYGGDNLKATYQTSSKMLGLEWSNN 179

Query:   181 SKINGDFKIQAALNLAEELRVPKLTAESTWNFEM 214
             SK  G FK+ A++NLAEEL+ PKLTAE+TWN E+
Sbjct:   180 SKSTGSFKVCASMNLAEELKPPKLTAETTWNLEL 213


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.317   0.132   0.389    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      214       214   0.00085  112 3  11 22  0.38    33
                                                     31  0.49    35


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  612 (65 KB)
  Total size of DFA:  179 KB (2102 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  15.98u 0.11s 16.09t   Elapsed:  00:00:01
  Total cpu time:  15.98u 0.11s 16.09t   Elapsed:  00:00:01
  Start:  Tue May 21 04:08:36 2013   End:  Tue May 21 04:08:37 2013

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0045036 "protein targeting to chloroplast" evidence=RCA

GO:0009536 "plastid" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
O49929	OEP24_PEA	No assigned EC number	0.7289	0.9953	1.0	N/A	no
Q75IQ4	OEP24_ORYSJ	No assigned EC number	0.4866	1.0	0.9553	yes	no
Q8H0Y1	OP24B_ARATH	No assigned EC number	0.7009	0.9859	0.9906	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: eugene3.00141290 hypothetical protein (212 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	214
PF01459	273	Porin_3: Eukaryotic porin; InterPro: IPR001925 The	89.58
cd02861	82	E_set_proteins_like E or "early" set-like proteins	82.38

>PF01459 Porin_3: Eukaryotic porin; InterPro: IPR001925 The major protein of the outer mitochondrial membrane of eukaryotes is a porin that forms a voltage-dependent anion-selective channel (VDAC) that behaves as a general diffusion pore for small hydrophilic molecules [, , , ]

Probab=89.58  E-value=11  Score=31.53  Aligned_cols=133  Identities=15%  Similarity=0.209  Sum_probs=82.3

Q ss_pred             eEEEEeeCCCCCeeEEEeeeeeecceeeeEEEeecCCCceeEEeeEEEEeCCC-ceE-----EEEEec------------
Q 028082           58 FFIVDYNVPKKDFRFQFMNSVRVADKPLNLTYIHGRGDNRTILEGTLVFDSAN-KVS-----ANHVLG------------  119 (214)
Q Consensus        58 sF~iDy~~~~~d~rFQFmnt~~V~~k~lnlTY~H~~~~nrT~ldgtl~~D~aN-K~s-----~~y~~~------------  119 (214)
                      .+.+||.-+.-...+++.|.   ....+.+.|..+.. .+-.|=+.+++|..+ ++.     ++|.-.            
T Consensus       108 ~l~~~y~~~~~~~~~~~~~~---~~~~~~~s~~~~v~-~~~~lG~e~~~~~~~~~~~~~~~~~~~~~~Y~~~~~~~~~~~  183 (273)
T PF01459_consen  108 QLEADYKGDDFNATFKVDND---NNPIFNASYVQSVT-PNLALGAEATYDLSSGKSSKYNAGLSYAARYTHPDYTASATL  183 (273)
T ss_dssp             EEEEEEEETTEEEEEEEEES---TS-EEEEEEEEEET--TEEEEEEEEEETTTTCEEEEEEEEEEEET----TEEEEEEE
T ss_pred             EEEEEEecCCEEEEEEEccc---CCCcEEEEEEEecc-ccEEEEEEEEEecccCCcCcceEEEEEeccccceeEEEEEEE
Confidence            34566665555555555551   25568888888744 467888999998886 444     455555            


Q ss_pred             -CCCeeEEEEEEeC---Ce-eeEEeecccccc--ceeeEEEEeecCCCeEEEEEecCcceEEEEEeeCCCCCcceEEEEe
Q 028082          120 -SGNCKLKYTYVHG---GL-TTFEQWYDLAKN--SWDFAVSRKVYGDDMFRASYQTSSKALALEWSRNSKINGDFKIQAA  192 (214)
Q Consensus       120 -s~~c~lKY~YvH~---g~-tt~EP~yd~~~n--sWdfavs~k~~g~d~vratY~~~~k~lgleWsr~sk~~G~fKv~a~  192 (214)
                       .....+.-+|.|.   .+ .-.|=.++..++  ...+++.+++.+...+|+..++.. .+++-+...-..+=.|-+++.
T Consensus       184 ~~~~~~l~~sy~~k~~~~~~~g~e~~~~~~~~~~~~~vG~~~~l~~~~~vk~kvds~g-~v~~~~~~~l~~~~~l~ls~~  262 (273)
T PF01459_consen  184 SNNFGTLTASYFQKVNDKLQLGAELTYNLSSRESTFTVGYQYKLDDSSTVKAKVDSNG-RVSASYEQKLNPGVTLTLSAE  262 (273)
T ss_dssp             -ETTTEEEEEEEEESSTTEEEEEEEEEETTCCEEEEEEEEEEEECTTEEEEEEEETTS-EEEEEEEEEECTTEEEEEEEE
T ss_pred             cCCCCEEEEEEEEEeccceeeeeeeeecccCCCceEEEEEEEEcCcccEEEEEEcCCC-EEEEEEEEecCCCcEEEEEEE
Confidence             1345556677776   22 334445555544  455666777777779999999887 455555544333334666776


Q ss_pred             eec
Q 028082          193 LNL  195 (214)
Q Consensus       193 ~~L  195 (214)
                      +|.
T Consensus       263 ~d~  265 (273)
T PF01459_consen  263 LDH  265 (273)
T ss_dssp             ECT
T ss_pred             Ecc
Confidence            666

The channel adopts an open conformation at low or zero membrane potential and a closed conformation at potentials above 30-40 mV. This protein contains about 280 amino acids and its sequence is composed of between 12 to 16 beta-strands that span the mitochondrial outer membrane. Yeast contains two members of this family (genes POR1 and POR2); vertebrates have at least three members (genes VDAC1, VDAC2 and VDAC3) [].; GO: 0008308 voltage-gated anion channel activity, 0006820 anion transport, 0044070 regulation of anion transport, 0055085 transmembrane transport, 0005741 mitochondrial outer membrane; PDB: 3EMN_X 2K4T_A 2JK4_A.

>cd02861 E_set_proteins_like E or "early" set-like proteins

Probab=82.38  E-value=8.6  Score=27.74  Aligned_cols=50  Identities=18%  Similarity=0.456  Sum_probs=34.5

Q ss_pred             EEeecCceEEEEeeCCCCCeeEEEeeeeeecceeeeEEEeecCCCceeEEeeEEE-EeCCCceEEEEEecCCCee
Q 028082           51 LAVEKPGFFIVDYNVPKKDFRFQFMNSVRVADKPLNLTYIHGRGDNRTILEGTLV-FDSANKVSANHVLGSGNCK  124 (214)
Q Consensus        51 L~vEKPGsF~iDy~~~~~d~rFQFmnt~~V~~k~lnlTY~H~~~~nrT~ldgtl~-~D~aNK~s~~y~~~s~~c~  124 (214)
                      |.-.+.|.|.+...++....+|+|                        ++||... .||.|.-...=.|+..||-
T Consensus        30 m~~~~~G~w~~~~~l~~G~y~Ykf------------------------~vdg~~~~~DP~~~~~~~~~~g~~n~v   80 (82)
T cd02861          30 MEREGDGLWVVTVELRPGRYEYKF------------------------VVDGEWVIVDPNAAAYVDDGFGGKNAV   80 (82)
T ss_pred             CEECCCCcEEEEEeCCCCcEEEEE------------------------EECCEEeeCCCCCCceecCCCCccceE
Confidence            333355899999999998889998                        3455555 6887776666666655553

These alpha amylase-like sugar utilizing enzymes which may be related to the immunoglobulin and/or fibronectin type III superfamilies are associated with different types of catalytic domains at either the N-terminal or C-terminal end. Members of this family include members of the alpha amylase family, sialidase, galactose oxidase, cellulase, cellulose, hyaluronate lyase, chitobiase, and chitinase.

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00